AlfalfaGEDB | MS.gene064961

M. sativa cultivar XinJiangDaYe / MS.gene064961

KEGG: -
GO: -
PFAM: PF03018.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064961.t1	KEH41194.1	97.9	236	5	0	1	236	1	236	2.40E-110	408.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064961.t1	Q9T0H8	63.2	234	79	2	3	236	18	244	9.8e-76	284.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064961.t1	A0A072VGM0	97.9	236	5	0	1	236	1	236	1.8e-110	408.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052211	MS.gene064961	0.841532	4.49E-58	-1.69E-46
MS.gene052212	MS.gene064961	0.817159	3.81E-52	-1.69E-46
MS.gene052606	MS.gene064961	0.803961	2.72E-49	-1.69E-46
MS.gene054138	MS.gene064961	0.801306	9.58E-49	-1.69E-46
MS.gene054146	MS.gene064961	0.80894	2.42E-50	-1.69E-46
MS.gene05470	MS.gene064961	-0.804006	2.66E-49	-1.69E-46
MS.gene054742	MS.gene064961	0.804537	2.06E-49	-1.69E-46
MS.gene055240	MS.gene064961	0.80594	1.05E-49	-1.69E-46
MS.gene056218	MS.gene064961	0.838655	2.53E-57	-1.69E-46
MS.gene056748	MS.gene064961	0.803907	2.79E-49	-1.69E-46
MS.gene056922	MS.gene064961	0.814548	1.46E-51	-1.69E-46
MS.gene057261	MS.gene064961	0.835127	2.01E-56	-1.69E-46
MS.gene060087	MS.gene064961	0.802644	5.09E-49	-1.69E-46
MS.gene060358	MS.gene064961	0.807814	4.21E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064961.t1	MTR_1g046490	97.881	236	5	0	1	236	1	236	5.34e-168	462
MS.gene064961.t1	MTR_1g046800	89.130	230	23	1	7	236	23	250	3.16e-147	410
MS.gene064961.t1	MTR_1g046500	89.565	230	22	1	7	236	23	250	1.06e-142	399
MS.gene064961.t1	MTR_4g062520	42.060	233	113	6	19	236	78	303	3.76e-40	140
MS.gene064961.t1	MTR_4g062470	42.982	228	109	6	23	236	84	304	3.93e-40	140
MS.gene064961.t1	MTR_1g115510	38.235	238	124	6	19	236	119	353	1.44e-38	137
MS.gene064961.t1	MTR_7g021300	36.719	256	122	8	5	234	146	387	3.70e-38	137
MS.gene064961.t1	MTR_4g062460	38.596	228	120	7	21	234	36	257	3.60e-34	123
MS.gene064961.t1	MTR_1g115515	28.708	209	117	4	23	226	43	224	1.45e-17	79.0
MS.gene064961.t1	MTR_1g054525	35.780	109	67	2	104	209	62	170	2.88e-15	72.0
MS.gene064961.t1	MTR_4g049550	37.069	116	64	3	122	234	66	175	9.74e-15	70.1
MS.gene064961.t1	MTR_4g122110	37.079	89	55	1	120	207	66	154	2.30e-14	69.3
MS.gene064961.t1	MTR_7g093790	41.489	94	53	2	120	211	76	169	4.89e-14	68.6
MS.gene064961.t1	MTR_4g122130	39.000	100	58	3	114	211	60	158	7.37e-14	67.8
MS.gene064961.t1	MTR_4g013385	40.000	90	53	1	122	210	78	167	8.29e-14	68.2
MS.gene064961.t1	MTR_0433s0040	40.000	90	53	1	122	210	78	167	8.29e-14	68.2
MS.gene064961.t1	MTR_7g093820	38.947	95	56	2	119	211	78	172	1.47e-13	67.4
MS.gene064961.t1	MTR_7g093850	40.000	95	55	2	119	211	78	172	1.74e-13	67.0
MS.gene064961.t1	MTR_4g013335	29.927	137	93	2	76	209	36	172	2.73e-13	66.6
MS.gene064961.t1	MTR_7g093830	38.947	95	56	2	119	211	77	171	2.73e-13	66.6
MS.gene064961.t1	MTR_4g049570	34.211	114	70	2	122	234	66	175	4.72e-13	65.9
MS.gene064961.t1	MTR_4g013310	30.147	136	84	3	106	236	67	196	6.42e-13	65.9
MS.gene064961.t1	MTR_4g013325	36.667	90	56	1	121	209	86	175	8.27e-13	65.5
MS.gene064961.t1	MTR_4g013770	38.298	94	57	1	121	213	78	171	1.72e-12	64.3
MS.gene064961.t1	MTR_3g034030	32.407	108	72	1	102	208	53	160	4.10e-12	63.2
MS.gene064961.t1	MTR_4g078885	31.481	108	73	1	102	208	53	160	1.97e-11	61.2
MS.gene064961.t1	MTR_7g093870	36.082	97	56	2	120	211	76	171	3.71e-11	61.2
MS.gene064961.t1	MTR_4g013345	35.955	89	56	1	122	209	84	172	5.31e-11	60.5
MS.gene064961.t1	MTR_5g096120	41.304	92	52	1	122	211	76	167	6.32e-11	60.1
MS.gene064961.t1	MTR_7g070390	32.609	92	61	1	121	211	79	170	9.76e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064961.t1	AT4G13580	68.803	234	66	2	3	236	18	244	2.56e-109	315
MS.gene064961.t1	AT3G24020	66.525	236	72	2	1	236	15	243	8.99e-109	313
MS.gene064961.t1	AT1G07730	44.348	230	106	6	25	236	164	389	5.63e-44	152
MS.gene064961.t1	AT3G55230	39.918	243	124	7	15	236	62	303	1.11e-42	147
MS.gene064961.t1	AT2G28670	46.087	230	100	6	27	236	1	226	1.34e-42	144
MS.gene064961.t1	AT2G28670	46.121	232	101	6	25	236	209	436	8.13e-42	147
MS.gene064961.t1	AT2G39430	40.496	242	122	8	16	236	80	320	1.88e-41	144
MS.gene064961.t1	AT1G65870	33.636	110	70	2	108	214	62	171	9.26e-15	70.5
MS.gene064961.t1	AT5G42510	38.043	92	56	1	118	208	69	160	1.55e-13	67.0
MS.gene064961.t1	AT3G13650	34.409	93	60	1	122	213	74	166	2.31e-13	66.6
MS.gene064961.t1	AT5G42500	35.484	93	59	1	120	211	74	166	6.52e-13	65.5
MS.gene064961.t1	AT3G58090	34.091	88	57	1	125	211	163	250	2.42e-12	65.1
MS.gene064961.t1	AT5G49030	35.165	91	58	1	122	211	79	169	3.07e-12	66.2
MS.gene064961.t1	AT5G49040	35.165	91	58	1	122	211	79	169	3.20e-11	60.8
MS.gene064961.t1	AT1G22900	36.364	88	55	1	122	208	84	171	3.61e-11	60.8

Find 67 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTTTCCTGTGGCTGCAAT+TGG	0.276263	1.4:-31079339	None:intergenic
CCTACTGTTAATGGTGTTAC+TGG	0.278568	1.4:+31079534	MS.gene064961:CDS
GGGTTAACACCATTTGCATT+AGG	0.295866	1.4:-31079513	None:intergenic
GGACCTGATGGACTTGGATT+AGG	0.319881	1.4:+31079642	MS.gene064961:CDS
TTAACATCTCAACCTGAGTT+AGG	0.324097	1.4:+31079696	MS.gene064961:CDS
GATGGACTTGGATTAGGATT+TGG	0.351208	1.4:+31079648	MS.gene064961:CDS
GGTGTTACTGGTATCCCTTT+AGG	0.357291	1.4:+31079546	MS.gene064961:CDS
GGTTAACACCATTTGCATTA+GGG	0.366850	1.4:-31079512	None:intergenic
TGATTGTTATTGTTGTTGTT+TGG	0.384388	1.4:-31079597	None:intergenic
AAGTACTATGTCGCGATTGT+CGG	0.386251	1.4:+31079860	MS.gene064961:CDS
ACTGGTATCCCTTTAGGAAC+TGG	0.388166	1.4:+31079552	MS.gene064961:CDS
GGTGTTAACCCTACTGTTAA+TGG	0.390428	1.4:+31079525	MS.gene064961:CDS
CTTGGAATGTTGAATCCAAC+TGG	0.413683	1.4:-31079474	None:intergenic
ACCTGTCCAGGTGGAATAAG+AGG	0.418722	1.4:-31079936	None:intergenic
TTGTCGGTTGTAGGAGGGAC+GGG	0.426417	1.4:+31079876	MS.gene064961:CDS
TTGTTCATGCATGACATTCT+TGG	0.430091	1.4:+31079375	MS.gene064961:CDS
CCTTTAGGAACTGGTTTAGC+TGG	0.430422	1.4:+31079561	MS.gene064961:CDS
GGGAAGTTTAAGTATGCAAA+AGG	0.440542	1.4:+31079897	MS.gene064961:CDS
CCGGTCACTGGTCGAGCCGT+TGG	0.445896	1.4:-31079408	None:intergenic
ACACCATTTGCATTAGGGAT+TGG	0.448814	1.4:-31079507	None:intergenic
ACCTCTTATTCCACCTGGAC+AGG	0.449379	1.4:+31079935	MS.gene064961:CDS
ATACTCATCAGTACTTCAAA+TGG	0.453720	1.4:-31079998	None:intergenic
CAGCTAAACCAGTTCCTAAA+GGG	0.469050	1.4:-31079560	None:intergenic
AACAATGTTCAGTTAACGTT+AGG	0.471550	1.4:+31079621	MS.gene064961:CDS
TGCATGAACAACTCAATGAT+TGG	0.478315	1.4:-31079363	None:intergenic
ATGTCGCGATTGTCGGTTGT+AGG	0.484227	1.4:+31079867	MS.gene064961:CDS
ATGCCAATCCCTAATGCAAA+TGG	0.485841	1.4:+31079504	MS.gene064961:CDS
CGGTCACTGGTCGAGCCGTT+GGG	0.485879	1.4:-31079407	None:intergenic
CCAGCTAAACCAGTTCCTAA+AGG	0.497997	1.4:-31079561	None:intergenic
AATCCTAATCCAAGTCCATC+AGG	0.506312	1.4:-31079645	None:intergenic
CGACCAGTGACCGGTTTGCT+CGG	0.510231	1.4:+31079417	MS.gene064961:CDS
TCGCGATTGTCGGTTGTAGG+AGG	0.512692	1.4:+31079870	MS.gene064961:CDS
CCTGGACAGGTTGCTACTGA+TGG	0.513998	1.4:+31079948	MS.gene064961:CDS
TAACATCTCAACCTGAGTTA+GGG	0.514059	1.4:+31079697	MS.gene064961:CDS
ATGTAGCAAGTTCGGCTGAC+GGG	0.514478	1.4:+31079751	MS.gene064961:CDS
ACGTTAGGACCTGATGGACT+TGG	0.520993	1.4:+31079636	MS.gene064961:CDS
GAGTTAGGGTCACAAATTGT+TGG	0.522360	1.4:+31079711	MS.gene064961:CDS
CCAGTAACACCATTAACAGT+AGG	0.524588	1.4:-31079534	None:intergenic
CCATCAGTAGCAACCTGTCC+AGG	0.527354	1.4:-31079948	None:intergenic
GAATCCAACTGGGGTTGCAA+AGG	0.532298	1.4:-31079463	None:intergenic
GTATATGTTGCCGAGCAAAC+CGG	0.541501	1.4:-31079427	None:intergenic
TTCATGCATGACATTCTTGG+TGG	0.543393	1.4:+31079378	MS.gene064961:CDS
CTGAGACCTCTTATTCCACC+TGG	0.543896	1.4:+31079930	MS.gene064961:CDS
AATCCAACTGGGGTTGCAAA+GGG	0.544346	1.4:-31079462	None:intergenic
AATGATTGGTTCCTTTCCTG+TGG	0.544898	1.4:-31079349	None:intergenic
GGGATTGGCATACTATCACT+TGG	0.545050	1.4:-31079492	None:intergenic
TTGCCGAGCAAACCGGTCAC+TGG	0.546279	1.4:-31079420	None:intergenic
GTACCCTTTGCAACCCCAGT+TGG	0.549320	1.4:+31079459	MS.gene064961:CDS
TGACGGGAGTAGACAAATGA+TGG	0.549594	1.4:+31079767	MS.gene064961:CDS
GGAAGTTTAAGTATGCAAAA+GGG	0.559845	1.4:+31079898	MS.gene064961:CDS
TCCAATTGCAGCCACAGGAA+AGG	0.562874	1.4:+31079338	MS.gene064961:CDS
ATTGATCCAATTGCAGCCAC+AGG	0.569919	1.4:+31079333	MS.gene064961:CDS
CGCGATTGTCGGTTGTAGGA+GGG	0.572138	1.4:+31079871	MS.gene064961:CDS
CAGTTAACGTTAGGACCTGA+TGG	0.580607	1.4:+31079630	MS.gene064961:CDS
CAGTAACACCATTAACAGTA+GGG	0.587396	1.4:-31079533	None:intergenic
TATGTAGCAAGTTCGGCTGA+CGG	0.590795	1.4:+31079750	MS.gene064961:CDS
TGTCGGTTGTAGGAGGGACG+GGG	0.591191	1.4:+31079877	MS.gene064961:CDS
ACAATTTGTGACCCTAACTC+AGG	0.596548	1.4:-31079708	None:intergenic
ATTGTCGGTTGTAGGAGGGA+CGG	0.596598	1.4:+31079875	MS.gene064961:CDS
CCAACGGCTCGACCAGTGAC+CGG	0.606503	1.4:+31079408	MS.gene064961:CDS
TTGGAATGTTGAATCCAACT+GGG	0.618283	1.4:-31079473	None:intergenic
TACCATTGCAATGATGGCAA+TGG	0.622938	1.4:+31079293	None:intergenic
TCTTGGTGGCAGTAACCCAA+CGG	0.656099	1.4:+31079392	MS.gene064961:CDS
TCAGTAGCAACCTGTCCAGG+TGG	0.657359	1.4:-31079945	None:intergenic
ATGGTGCTGAGACTTTGTTG+AGG	0.693982	1.4:+31079967	MS.gene064961:CDS
TTGCTCGGCAACATATACAG+TGG	0.727097	1.4:+31079432	MS.gene064961:CDS
TGGAATGTTGAATCCAACTG+GGG	0.746650	1.4:-31079472	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATGGTTTGTATAAGAT+TGG	+	chr1.4:31079837-31079856	MS.gene064961:CDS	20.0%
!!	GGTGATAGTTTGAATTTTTA+TGG	+	chr1.4:31079822-31079841	MS.gene064961:CDS	25.0%
!!	TGATTGTTATTGTTGTTGTT+TGG	-	chr1.4:31079600-31079619	None:intergenic	25.0%
	AAATTGTTGGAAAAAGTCAG+GGG	+	chr1.4:31079724-31079743	MS.gene064961:CDS	30.0%
	AACAATGTTCAGTTAACGTT+AGG	+	chr1.4:31079621-31079640	MS.gene064961:CDS	30.0%
	ACAAATTGTTGGAAAAAGTC+AGG	+	chr1.4:31079722-31079741	MS.gene064961:CDS	30.0%
	CAAATTGTTGGAAAAAGTCA+GGG	+	chr1.4:31079723-31079742	MS.gene064961:CDS	30.0%
	GGAAGTTTAAGTATGCAAAA+GGG	+	chr1.4:31079898-31079917	MS.gene064961:CDS	30.0%
!!	GTTTTTACAGCACTTTTTGA+AGG	+	chr1.4:31079789-31079808	MS.gene064961:CDS	30.0%
	AATTGTTGGAAAAAGTCAGG+GGG	+	chr1.4:31079725-31079744	MS.gene064961:CDS	35.0%
	CAGTAACACCATTAACAGTA+GGG	-	chr1.4:31079536-31079555	None:intergenic	35.0%
	GGGAAGTTTAAGTATGCAAA+AGG	+	chr1.4:31079897-31079916	MS.gene064961:CDS	35.0%
	GGTTAACACCATTTGCATTA+GGG	-	chr1.4:31079515-31079534	None:intergenic	35.0%
	TAACATCTCAACCTGAGTTA+GGG	+	chr1.4:31079697-31079716	MS.gene064961:CDS	35.0%
	TGCATGAACAACTCAATGAT+TGG	-	chr1.4:31079366-31079385	None:intergenic	35.0%
	TTAACATCTCAACCTGAGTT+AGG	+	chr1.4:31079696-31079715	MS.gene064961:CDS	35.0%
	TTGGAATGTTGAATCCAACT+GGG	-	chr1.4:31079476-31079495	None:intergenic	35.0%
	TTGTTCATGCATGACATTCT+TGG	+	chr1.4:31079375-31079394	MS.gene064961:CDS	35.0%
!!	TTACAGCACTTTTTGAAGGA+GGG	+	chr1.4:31079793-31079812	MS.gene064961:CDS	35.0%
!!	TTTACAGCACTTTTTGAAGG+AGG	+	chr1.4:31079792-31079811	MS.gene064961:CDS	35.0%
	AAGTACTATGTCGCGATTGT+CGG	+	chr1.4:31079860-31079879	MS.gene064961:CDS	40.0%
	AATCCTAATCCAAGTCCATC+AGG	-	chr1.4:31079648-31079667	None:intergenic	40.0%
	ACAATTTGTGACCCTAACTC+AGG	-	chr1.4:31079711-31079730	None:intergenic	40.0%
	ACACCATTTGCATTAGGGAT+TGG	-	chr1.4:31079510-31079529	None:intergenic	40.0%
	ATGCCAATCCCTAATGCAAA+TGG	+	chr1.4:31079504-31079523	MS.gene064961:CDS	40.0%
	CAGCTAAACCAGTTCCTAAA+GGG	-	chr1.4:31079563-31079582	None:intergenic	40.0%
	CCAGTAACACCATTAACAGT+AGG	-	chr1.4:31079537-31079556	None:intergenic	40.0%
	CTTGGAATGTTGAATCCAAC+TGG	-	chr1.4:31079477-31079496	None:intergenic	40.0%
	GAGTTAGGGTCACAAATTGT+TGG	+	chr1.4:31079711-31079730	MS.gene064961:CDS	40.0%
	GGGTTAACACCATTTGCATT+AGG	-	chr1.4:31079516-31079535	None:intergenic	40.0%
	GGTGTTAACCCTACTGTTAA+TGG	+	chr1.4:31079525-31079544	MS.gene064961:CDS	40.0%
	TGGAATGTTGAATCCAACTG+GGG	-	chr1.4:31079475-31079494	None:intergenic	40.0%
	TTCATGCATGACATTCTTGG+TGG	+	chr1.4:31079378-31079397	MS.gene064961:CDS	40.0%
!	AATGATTGGTTCCTTTCCTG+TGG	-	chr1.4:31079352-31079371	None:intergenic	40.0%
!	GATGGACTTGGATTAGGATT+TGG	+	chr1.4:31079648-31079667	MS.gene064961:CDS	40.0%
!!	CCTACTGTTAATGGTGTTAC+TGG	+	chr1.4:31079534-31079553	MS.gene064961:CDS	40.0%
!!	TACAGCACTTTTTGAAGGAG+GGG	+	chr1.4:31079794-31079813	MS.gene064961:CDS	40.0%
	AATCCAACTGGGGTTGCAAA+GGG	-	chr1.4:31079465-31079484	None:intergenic	45.0%
	ATTGATCCAATTGCAGCCAC+AGG	+	chr1.4:31079333-31079352	MS.gene064961:CDS	45.0%
	CAGTTAACGTTAGGACCTGA+TGG	+	chr1.4:31079630-31079649	MS.gene064961:CDS	45.0%
	CCAGCTAAACCAGTTCCTAA+AGG	-	chr1.4:31079564-31079583	None:intergenic	45.0%
	GTATATGTTGCCGAGCAAAC+CGG	-	chr1.4:31079430-31079449	None:intergenic	45.0%
	TATGTAGCAAGTTCGGCTGA+CGG	+	chr1.4:31079750-31079769	MS.gene064961:CDS	45.0%
	TGACGGGAGTAGACAAATGA+TGG	+	chr1.4:31079767-31079786	MS.gene064961:CDS	45.0%
	TTGCTCGGCAACATATACAG+TGG	+	chr1.4:31079432-31079451	MS.gene064961:CDS	45.0%
!	ACTGGTATCCCTTTAGGAAC+TGG	+	chr1.4:31079552-31079571	MS.gene064961:CDS	45.0%
!	ATGGTGCTGAGACTTTGTTG+AGG	+	chr1.4:31079967-31079986	MS.gene064961:CDS	45.0%
!	CCTTTAGGAACTGGTTTAGC+TGG	+	chr1.4:31079561-31079580	MS.gene064961:CDS	45.0%
!	GGGATTGGCATACTATCACT+TGG	-	chr1.4:31079495-31079514	None:intergenic	45.0%
!!	CTTTTTGAAGGAGGGGAGTA+TGG	+	chr1.4:31079801-31079820	MS.gene064961:CDS	45.0%
!!	GGTGTTACTGGTATCCCTTT+AGG	+	chr1.4:31079546-31079565	MS.gene064961:CDS	45.0%
	ACCTCTTATTCCACCTGGAC+AGG	+	chr1.4:31079935-31079954	MS.gene064961:CDS	50.0%
	ACCTGTCCAGGTGGAATAAG+AGG	-	chr1.4:31079939-31079958	None:intergenic	50.0%
	ATGTAGCAAGTTCGGCTGAC+GGG	+	chr1.4:31079751-31079770	MS.gene064961:CDS	50.0%
	CTGAGACCTCTTATTCCACC+TGG	+	chr1.4:31079930-31079949	MS.gene064961:CDS	50.0%
	GAATCCAACTGGGGTTGCAA+AGG	-	chr1.4:31079466-31079485	None:intergenic	50.0%
	TCCAATTGCAGCCACAGGAA+AGG	+	chr1.4:31079338-31079357	MS.gene064961:CDS	50.0%
	TCCTTTCCTGTGGCTGCAAT+TGG	-	chr1.4:31079342-31079361	None:intergenic	50.0%
!	ATGTCGCGATTGTCGGTTGT+AGG	+	chr1.4:31079867-31079886	MS.gene064961:CDS	50.0%
!	ATTGTCGGTTGTAGGAGGGA+CGG	+	chr1.4:31079875-31079894	MS.gene064961:CDS	50.0%
!	GGGGGTGTATGTAGCAAGTT+CGG	+	chr1.4:31079743-31079762	MS.gene064961:CDS	50.0%
!	TCTTGGTGGCAGTAACCCAA+CGG	+	chr1.4:31079392-31079411	MS.gene064961:CDS	50.0%
!!	ACGTTAGGACCTGATGGACT+TGG	+	chr1.4:31079636-31079655	MS.gene064961:CDS	50.0%
!!	GGACCTGATGGACTTGGATT+AGG	+	chr1.4:31079642-31079661	MS.gene064961:CDS	50.0%
	CCATCAGTAGCAACCTGTCC+AGG	-	chr1.4:31079951-31079970	None:intergenic	55.0%
	CCTGGACAGGTTGCTACTGA+TGG	+	chr1.4:31079948-31079967	MS.gene064961:CDS	55.0%
	GTACCCTTTGCAACCCCAGT+TGG	+	chr1.4:31079459-31079478	MS.gene064961:CDS	55.0%
	TCAGTAGCAACCTGTCCAGG+TGG	-	chr1.4:31079948-31079967	None:intergenic	55.0%
!	CGCGATTGTCGGTTGTAGGA+GGG	+	chr1.4:31079871-31079890	MS.gene064961:CDS	55.0%
!	TCGCGATTGTCGGTTGTAGG+AGG	+	chr1.4:31079870-31079889	MS.gene064961:CDS	55.0%
!	TTGTCGGTTGTAGGAGGGAC+GGG	+	chr1.4:31079876-31079895	MS.gene064961:CDS	55.0%
	TTGCCGAGCAAACCGGTCAC+TGG	-	chr1.4:31079423-31079442	None:intergenic	60.0%
!	TGTCGGTTGTAGGAGGGACG+GGG	+	chr1.4:31079877-31079896	MS.gene064961:CDS	60.0%
!!	CGACCAGTGACCGGTTTGCT+CGG	+	chr1.4:31079417-31079436	MS.gene064961:CDS	60.0%
	CCAACGGCTCGACCAGTGAC+CGG	+	chr1.4:31079408-31079427	MS.gene064961:CDS	65.0%
	CGGTCACTGGTCGAGCCGTT+GGG	-	chr1.4:31079410-31079429	None:intergenic	65.0%
	CCGGTCACTGGTCGAGCCGT+TGG	-	chr1.4:31079411-31079430	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	31079303	31080013	31079303	ID=MS.gene064961
chr1.4	mRNA	31079303	31080013	31079303	ID=MS.gene064961.t1;Parent=MS.gene064961
chr1.4	exon	31079303	31080013	31079303	ID=MS.gene064961.t1.exon1;Parent=MS.gene064961.t1
chr1.4	CDS	31079303	31080013	31079303	ID=cds.MS.gene064961.t1;Parent=MS.gene064961.t1

Gene Sequence

>MS.gene064961

ATGATGGCAATGGCAACAAACATAACAGCTATTGATCCAATTGCAGCCACAGGAAAGGAACCAATCATTGAGTTGTTCATGCATGACATTCTTGGTGGCAGTAACCCAACGGCTCGACCAGTGACCGGTTTGCTCGGCAACATATACAGTGGTCAAGTACCCTTTGCAACCCCAGTTGGATTCAACATTCCAAGTGATAGTATGCCAATCCCTAATGCAAATGGTGTTAACCCTACTGTTAATGGTGTTACTGGTATCCCTTTAGGAACTGGTTTAGCTGGTACTTCTTTTGCACCAAACAACAACAATAACAATCAAAACAATGTTCAGTTAACGTTAGGACCTGATGGACTTGGATTAGGATTTGGTACAATTACTGTTATTGATGATATATTAACATCTCAACCTGAGTTAGGGTCACAAATTGTTGGAAAAAGTCAGGGGGTGTATGTAGCAAGTTCGGCTGACGGGAGTAGACAAATGATGGTTTTTACAGCACTTTTTGAAGGAGGGGAGTATGGTGATAGTTTGAATTTTTATGGTTTGTATAAGATTGGAAGTACTATGTCGCGATTGTCGGTTGTAGGAGGGACGGGGAAGTTTAAGTATGCAAAAGGGTTTGCTGAACTGAGACCTCTTATTCCACCTGGACAGGTTGCTACTGATGGTGCTGAGACTTTGTTGAGGATTACTGTCCATTTGAAGTACTGA

Protein sequence

>MS.gene064961.t1

MMAMATNITAIDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVPFATPVGFNIPSDSMPIPNANGVNPTVNGVTGIPLGTGLAGTSFAPNNNNNNQNNVQLTLGPDGLGLGFGTITVIDDILTSQPELGSQIVGKSQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVVGGTGKFKYAKGFAELRPLIPPGQVATDGAETLLRITVHLKY