Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052212.t1 | XP_003601959.2 | 77.9 | 199 | 44 | 0 | 1 | 199 | 1 | 199 | 3.50E-86 | 327.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052212.t1 | G7J3S5 | 77.9 | 199 | 44 | 0 | 1 | 199 | 1 | 199 | 2.5e-86 | 327.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene052212 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene052211 | MS.gene052212 | 0.912852 | 1.21E-83 | -1.69E-46 |
| MS.gene052212 | MS.gene05240 | 0.800641 | 1.31E-48 | -1.69E-46 |
| MS.gene052212 | MS.gene053406 | 0.818549 | 1.85E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene054146 | 0.859592 | 3.72E-63 | -1.69E-46 |
| MS.gene052212 | MS.gene055240 | 0.833573 | 4.93E-56 | -1.69E-46 |
| MS.gene052212 | MS.gene056218 | 0.808416 | 3.13E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene058603 | 0.815301 | 9.92E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene059955 | 0.828585 | 8.29E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene062180 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene052212 | MS.gene062636 | 0.812519 | 4.07E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene063954 | 0.808263 | 3.37E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene063988 | 0.801456 | 8.93E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene064313 | 0.820706 | 5.95E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene064961 | 0.817159 | 3.81E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene065466 | 0.819162 | 1.34E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene06593 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene066417 | 0.817559 | 3.10E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene066500 | 0.839381 | 1.64E-57 | -1.69E-46 |
| MS.gene052212 | MS.gene066602 | 0.842604 | 2.34E-58 | -1.69E-46 |
| MS.gene052212 | MS.gene06805 | 0.803397 | 3.56E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene068633 | 0.812757 | 3.61E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene069095 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene069166 | 0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene069482 | 0.805597 | 1.24E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene070947 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene072293 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene073526 | 0.843459 | 1.38E-58 | -1.69E-46 |
| MS.gene052212 | MS.gene073868 | 0.803868 | 2.84E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene07488 | 0.806312 | 8.75E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene23413 | 0.800208 | 1.61E-48 | -1.69E-46 |
| MS.gene052212 | MS.gene24862 | 0.845852 | 3.14E-59 | -1.69E-46 |
| MS.gene052212 | MS.gene26294 | 0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene28427 | 0.814014 | 1.91E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene28548 | 0.814441 | 1.54E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene29995 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene33445 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene33698 | 0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene34373 | 0.820381 | 7.07E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene35597 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene37747 | 0.832536 | 8.94E-56 | -1.69E-46 |
| MS.gene052212 | MS.gene38435 | 0.821114 | 4.80E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene39710 | 0.815801 | 7.67E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene40173 | 0.803319 | 3.69E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene42005 | 0.8116 | 6.46E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene44712 | 0.840806 | 6.96E-58 | -1.69E-46 |
| MS.gene052212 | MS.gene45893 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene47719 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene47721 | 0.825802 | 3.84E-54 | -1.69E-46 |
| MS.gene052212 | MS.gene48021 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene48023 | 0.823637 | 1.24E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene48885 | 0.817481 | 3.22E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene49021 | 0.82099 | 5.12E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene50279 | 0.822714 | 2.04E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene52370 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene54029 | 0.803493 | 3.40E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene55012 | 0.82039 | 7.04E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene56375 | 0.805449 | 1.33E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene56384 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene56509 | 0.82876 | 7.52E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene58107 | 0.810576 | 1.08E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene59799 | 0.823831 | 1.12E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene62222 | 0.828659 | 7.95E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene63444 | 0.809965 | 1.46E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene63914 | 0.811127 | 8.18E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene64276 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene64397 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene65040 | 0.81855 | 1.85E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene65822 | 0.804886 | 1.74E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene65823 | 0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene65948 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene69966 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene71251 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene71350 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene74774 | 0.820948 | 5.24E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene75471 | 0.894071 | 3.48E-75 | -1.69E-46 |
| MS.gene052212 | MS.gene75472 | 0.883919 | 2.99E-71 | -1.69E-46 |
| MS.gene052212 | MS.gene79220 | 0.821132 | 4.75E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene79221 | 0.817248 | 3.64E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene79222 | 0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene79803 | 0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene80293 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene80744 | 0.855627 | 5.56E-62 | -1.69E-46 |
| MS.gene052212 | MS.gene81504 | 0.817876 | 2.63E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene81505 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene81506 | 0.823246 | 1.54E-53 | -1.69E-46 |
| MS.gene052212 | MS.gene82244 | 0.808514 | 2.98E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene82245 | 0.806578 | 7.68E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene83329 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene83365 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene052212 | MS.gene87056 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene87346 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene87750 | 0.812572 | 3.96E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene91226 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene92507 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene93632 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene052212 | MS.gene95804 | 0.819411 | 1.18E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene97125 | 0.809181 | 2.15E-50 | -1.69E-46 |
| MS.gene052212 | MS.gene98322 | 0.811435 | 7.01E-51 | -1.69E-46 |
| MS.gene052212 | MS.gene98480 | 0.815478 | 9.06E-52 | -1.69E-46 |
| MS.gene052212 | MS.gene99062 | 0.809352 | 1.97E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052212.t1 | MTR_3g087280 | 86.432 | 199 | 27 | 0 | 1 | 199 | 1 | 199 | 1.94e-131 | 367 |
| MS.gene052212.t1 | MTR_3g087325 | 86.432 | 199 | 27 | 0 | 1 | 199 | 1 | 199 | 2.15e-128 | 359 |
| MS.gene052212.t1 | MTR_3g087278 | 84.925 | 199 | 30 | 0 | 1 | 199 | 1 | 199 | 2.22e-128 | 359 |
| MS.gene052212.t1 | MTR_3g087275 | 86.432 | 199 | 26 | 1 | 1 | 199 | 1 | 198 | 1.54e-126 | 355 |
| MS.gene052212.t1 | MTR_3g087270 | 83.417 | 199 | 33 | 0 | 1 | 199 | 1 | 199 | 7.77e-125 | 350 |
| MS.gene052212.t1 | MTR_3g087330 | 81.910 | 199 | 36 | 0 | 1 | 199 | 1 | 199 | 9.06e-124 | 348 |
| MS.gene052212.t1 | MTR_3g087300 | 67.513 | 197 | 20 | 3 | 1 | 197 | 1 | 153 | 3.22e-87 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052212.t1 | AT5G65030 | 31.472 | 197 | 110 | 7 | 11 | 187 | 10 | 201 | 3.44e-25 | 97.4 |
| MS.gene052212.t1 | AT5G10210 | 31.313 | 198 | 110 | 8 | 15 | 199 | 13 | 197 | 1.17e-24 | 95.9 |
Find 36 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCCAAATCATTGCCCTTT+TGG | 0.190841 | 3.2:-74504811 | MS.gene052212:CDS |
| ACACTAGGCTTTGTTGATTA+AGG | 0.234215 | 3.2:+74504738 | None:intergenic |
| CTCACCTTTCCCAATTAGTT+TGG | 0.258127 | 3.2:+74504685 | None:intergenic |
| ATATGGAGCTCCAAACTAAT+TGG | 0.259330 | 3.2:-74504695 | MS.gene052212:CDS |
| TTAATCTCCACTTCCACTTC+TGG | 0.281665 | 3.2:+74504557 | None:intergenic |
| TGCACTTGGCGCAGCTTTGG+AGG | 0.390376 | 3.2:-74504405 | MS.gene052212:CDS |
| GTCCCAAAAGGGCAATGATT+TGG | 0.392085 | 3.2:+74504808 | None:intergenic |
| ATTTGCACTTGGCGCAGCTT+TGG | 0.400082 | 3.2:-74504408 | MS.gene052212:CDS |
| AGCTAAGGCAAAGGAAGATA+TGG | 0.410362 | 3.2:-74504712 | MS.gene052212:CDS |
| GATTCAAGAATCACTTTCCA+TGG | 0.437928 | 3.2:+74504659 | None:intergenic |
| TATGGAGCTCCAAACTAATT+GGG | 0.458287 | 3.2:-74504694 | MS.gene052212:CDS |
| AAAATGGTTGAAGATGGATT+TGG | 0.470551 | 3.2:-74504618 | MS.gene052212:CDS |
| AGTAGCTTCGGTTGCTGAGA+TGG | 0.471131 | 3.2:-74504528 | MS.gene052212:CDS |
| GATTAAAATAAAAGTAGCTT+CGG | 0.474275 | 3.2:-74504540 | MS.gene052212:CDS |
| ACTAAATGACTCGTCCCAAA+AGG | 0.477554 | 3.2:+74504796 | None:intergenic |
| CTGTGAATTGAGAATAATAC+AGG | 0.480110 | 3.2:-74504936 | MS.gene052212:CDS |
| TTGGGAAAGGTGAGATTCCA+TGG | 0.490587 | 3.2:-74504676 | MS.gene052212:CDS |
| AAAGCCTAGTGTTGGAGCTA+AGG | 0.499139 | 3.2:-74504727 | MS.gene052212:CDS |
| TTTGCCTTAGCTCCAACACT+AGG | 0.507447 | 3.2:+74504723 | None:intergenic |
| AGATGGAGAAGCAAAATAAG+AGG | 0.509817 | 3.2:-74504511 | MS.gene052212:CDS |
| CTAAATGACTCGTCCCAAAA+GGG | 0.528554 | 3.2:+74504797 | None:intergenic |
| ATGAATAATTTGAATGAGTG+TGG | 0.533229 | 3.2:-74504485 | MS.gene052212:CDS |
| ACGGCCATGACCATCGTGCT+TGG | 0.538014 | 3.2:-74504454 | MS.gene052212:CDS |
| CCAAAAGGGCAATGATTTGG+CGG | 0.551334 | 3.2:+74504811 | None:intergenic |
| TAATCAACAAAGCCTAGTGT+TGG | 0.564525 | 3.2:-74504735 | MS.gene052212:CDS |
| AGCACCAAGCACGATGGTCA+TGG | 0.566327 | 3.2:+74504450 | None:intergenic |
| AGTCGAAGTGATTGCAAAGA+GGG | 0.568276 | 3.2:-74504593 | MS.gene052212:CDS |
| CATAACGCCAGAAGTGGAAG+TGG | 0.570407 | 3.2:-74504564 | MS.gene052212:CDS |
| GATTCTTGAATCACAAAACA+TGG | 0.583125 | 3.2:-74504648 | MS.gene052212:CDS |
| TATGTTCATAACGCCAGAAG+TGG | 0.583659 | 3.2:-74504570 | MS.gene052212:CDS |
| ACATATGAAGATACATGAGA+TGG | 0.585374 | 3.2:+74504968 | None:intergenic |
| TAGTGTTGGAGCTAAGGCAA+AGG | 0.590191 | 3.2:-74504721 | MS.gene052212:CDS |
| GATTGTGATATATTTGCACT+TGG | 0.591421 | 3.2:-74504419 | MS.gene052212:CDS |
| AGCTCCAAACTAATTGGGAA+AGG | 0.607689 | 3.2:-74504689 | MS.gene052212:CDS |
| GAGTCGAAGTGATTGCAAAG+AGG | 0.661989 | 3.2:-74504594 | MS.gene052212:CDS |
| CAGCGCAGCACCAAGCACGA+TGG | 0.681591 | 3.2:+74504444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTAAAATAAAAGTAGCTT+CGG | - | chr3.2:74504831-74504850 | MS.gene052212:CDS | 20.0% |
| ! | AAAACATGGAGCTAAAAAAA+TGG | - | chr3.2:74504737-74504756 | MS.gene052212:CDS | 25.0% |
| ! | ATGAATAATTTGAATGAGTG+TGG | - | chr3.2:74504886-74504905 | MS.gene052212:CDS | 25.0% |
| ACATATGAAGATACATGAGA+TGG | + | chr3.2:74504406-74504425 | None:intergenic | 30.0% | |
| CTGTGAATTGAGAATAATAC+AGG | - | chr3.2:74504435-74504454 | MS.gene052212:CDS | 30.0% | |
| GATTCTTGAATCACAAAACA+TGG | - | chr3.2:74504723-74504742 | MS.gene052212:CDS | 30.0% | |
| GATTGTGATATATTTGCACT+TGG | - | chr3.2:74504952-74504971 | MS.gene052212:CDS | 30.0% | |
| GCTAAAAAAATGGTTGAAGA+TGG | - | chr3.2:74504747-74504766 | MS.gene052212:CDS | 30.0% | |
| ! | AAAATGGTTGAAGATGGATT+TGG | - | chr3.2:74504753-74504772 | MS.gene052212:CDS | 30.0% |
| ! | AAGGTTTTCCATGAAATCTT+GGG | + | chr3.2:74504617-74504636 | None:intergenic | 30.0% |
| ! | TAAGGTTTTCCATGAAATCT+TGG | + | chr3.2:74504618-74504637 | None:intergenic | 30.0% |
| !!! | ATTCTTTTGTTGTTCTCTGT+TGG | + | chr3.2:74504517-74504536 | None:intergenic | 30.0% |
| AATGAGTGTGGATGCAAAAA+CGG | - | chr3.2:74504898-74504917 | MS.gene052212:CDS | 35.0% | |
| AGATGGAGAAGCAAAATAAG+AGG | - | chr3.2:74504860-74504879 | MS.gene052212:CDS | 35.0% | |
| ATATGGAGCTCCAAACTAAT+TGG | - | chr3.2:74504676-74504695 | MS.gene052212:CDS | 35.0% | |
| GATTCAAGAATCACTTTCCA+TGG | + | chr3.2:74504715-74504734 | None:intergenic | 35.0% | |
| TAATCAACAAAGCCTAGTGT+TGG | - | chr3.2:74504636-74504655 | MS.gene052212:CDS | 35.0% | |
| TATGGAGCTCCAAACTAATT+GGG | - | chr3.2:74504677-74504696 | MS.gene052212:CDS | 35.0% | |
| ! | AGGTTTTCCATGAAATCTTG+GGG | + | chr3.2:74504616-74504635 | None:intergenic | 35.0% |
| !! | ACACTAGGCTTTGTTGATTA+AGG | + | chr3.2:74504636-74504655 | None:intergenic | 35.0% |
| ACTAAATGACTCGTCCCAAA+AGG | + | chr3.2:74504578-74504597 | None:intergenic | 40.0% | |
| AGCTAAGGCAAAGGAAGATA+TGG | - | chr3.2:74504659-74504678 | MS.gene052212:CDS | 40.0% | |
| AGCTCCAAACTAATTGGGAA+AGG | - | chr3.2:74504682-74504701 | MS.gene052212:CDS | 40.0% | |
| AGTCGAAGTGATTGCAAAGA+GGG | - | chr3.2:74504778-74504797 | MS.gene052212:CDS | 40.0% | |
| CTAAATGACTCGTCCCAAAA+GGG | + | chr3.2:74504577-74504596 | None:intergenic | 40.0% | |
| CTCACCTTTCCCAATTAGTT+TGG | + | chr3.2:74504689-74504708 | None:intergenic | 40.0% | |
| TATGTTCATAACGCCAGAAG+TGG | - | chr3.2:74504801-74504820 | MS.gene052212:CDS | 40.0% | |
| TTAATCTCCACTTCCACTTC+TGG | + | chr3.2:74504817-74504836 | None:intergenic | 40.0% | |
| ! | CGACGAAAAACTTGTTTGCA+AGG | - | chr3.2:74504482-74504501 | MS.gene052212:CDS | 40.0% |
| ! | GGTTTTCCATGAAATCTTGG+GGG | + | chr3.2:74504615-74504634 | None:intergenic | 40.0% |
| GAGTCGAAGTGATTGCAAAG+AGG | - | chr3.2:74504777-74504796 | MS.gene052212:CDS | 45.0% | |
| GTCCCAAAAGGGCAATGATT+TGG | + | chr3.2:74504566-74504585 | None:intergenic | 45.0% | |
| TTCTTGCCCCCAAGATTTCA+TGG | - | chr3.2:74504606-74504625 | MS.gene052212:CDS | 45.0% | |
| TTGGGAAAGGTGAGATTCCA+TGG | - | chr3.2:74504695-74504714 | MS.gene052212:CDS | 45.0% | |
| TTTGCCTTAGCTCCAACACT+AGG | + | chr3.2:74504651-74504670 | None:intergenic | 45.0% | |
| ! | AAAGCCTAGTGTTGGAGCTA+AGG | - | chr3.2:74504644-74504663 | MS.gene052212:CDS | 45.0% |
| ! | CCAAAAGGGCAATGATTTGG+CGG | + | chr3.2:74504563-74504582 | None:intergenic | 45.0% |
| ! | CGCCAAATCATTGCCCTTTT+GGG | - | chr3.2:74504561-74504580 | MS.gene052212:CDS | 45.0% |
| ! | TAGTGTTGGAGCTAAGGCAA+AGG | - | chr3.2:74504650-74504669 | MS.gene052212:CDS | 45.0% |
| AGTAGCTTCGGTTGCTGAGA+TGG | - | chr3.2:74504843-74504862 | MS.gene052212:CDS | 50.0% | |
| ATTTGCACTTGGCGCAGCTT+TGG | - | chr3.2:74504963-74504982 | MS.gene052212:CDS | 50.0% | |
| CATAACGCCAGAAGTGGAAG+TGG | - | chr3.2:74504807-74504826 | MS.gene052212:CDS | 50.0% | |
| ! | CCGCCAAATCATTGCCCTTT+TGG | - | chr3.2:74504560-74504579 | MS.gene052212:CDS | 50.0% |
| AGCACCAAGCACGATGGTCA+TGG | + | chr3.2:74504924-74504943 | None:intergenic | 55.0% | |
| ACGGCCATGACCATCGTGCT+TGG | - | chr3.2:74504917-74504936 | MS.gene052212:CDS | 60.0% | |
| ! | TGCACTTGGCGCAGCTTTGG+AGG | - | chr3.2:74504966-74504985 | MS.gene052212:CDS | 60.0% |
| CAGCGCAGCACCAAGCACGA+TGG | + | chr3.2:74504930-74504949 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74504397 | 74504996 | 74504397 | ID=MS.gene052212 |
| chr3.2 | mRNA | 74504397 | 74504996 | 74504397 | ID=MS.gene052212.t1;Parent=MS.gene052212 |
| chr3.2 | exon | 74504397 | 74504996 | 74504397 | ID=MS.gene052212.t1.exon1;Parent=MS.gene052212.t1 |
| chr3.2 | CDS | 74504397 | 74504996 | 74504397 | ID=cds.MS.gene052212.t1;Parent=MS.gene052212.t1 |
| Gene Sequence |
| Protein sequence |
