Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065049.t1 | XP_013470285.1 | 94.8 | 382 | 16 | 1 | 1 | 378 | 1 | 382 | 5.40E-221 | 776.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065049.t1 | Q940H3 | 64.9 | 348 | 114 | 4 | 33 | 376 | 29 | 372 | 2.1e-141 | 503.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065049.t1 | A0A072VSC4 | 94.8 | 382 | 16 | 1 | 1 | 378 | 1 | 382 | 3.9e-221 | 776.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052143 | MS.gene065049 | 0.803363 | 3.61E-49 | -1.69E-46 |
MS.gene055251 | MS.gene065049 | 0.827316 | 1.67E-54 | -1.69E-46 |
MS.gene060076 | MS.gene065049 | 0.828028 | 1.13E-54 | -1.69E-46 |
MS.gene061044 | MS.gene065049 | 0.802771 | 4.79E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene070181 | MS.gene065049 | PPI |
MS.gene027587 | MS.gene065049 | PPI |
MS.gene027586 | MS.gene065049 | PPI |
MS.gene22010 | MS.gene065049 | PPI |
MS.gene82618 | MS.gene065049 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065049.t1 | MTR_1g112210 | 95.833 | 360 | 15 | 0 | 19 | 378 | 23 | 382 | 0.0 | 734 |
MS.gene065049.t1 | MTR_1g112210 | 92.500 | 360 | 14 | 1 | 19 | 378 | 23 | 369 | 0.0 | 699 |
MS.gene065049.t1 | MTR_1g050448 | 73.351 | 379 | 96 | 3 | 1 | 378 | 1 | 375 | 0.0 | 601 |
MS.gene065049.t1 | MTR_3g464570 | 42.216 | 334 | 175 | 5 | 55 | 374 | 43 | 372 | 6.48e-99 | 298 |
MS.gene065049.t1 | MTR_5g071350 | 40.469 | 341 | 179 | 5 | 55 | 374 | 58 | 395 | 1.83e-98 | 298 |
MS.gene065049.t1 | MTR_2g015720 | 42.296 | 331 | 170 | 6 | 55 | 378 | 42 | 358 | 1.70e-95 | 289 |
MS.gene065049.t1 | MTR_4g016940 | 42.075 | 347 | 177 | 8 | 53 | 378 | 84 | 427 | 1.57e-92 | 284 |
MS.gene065049.t1 | MTR_3g049330 | 42.216 | 334 | 169 | 7 | 55 | 378 | 31 | 350 | 3.60e-92 | 280 |
MS.gene065049.t1 | MTR_2g091175 | 39.458 | 332 | 180 | 6 | 54 | 378 | 49 | 366 | 1.44e-91 | 280 |
MS.gene065049.t1 | MTR_7g093450 | 38.947 | 380 | 208 | 8 | 19 | 378 | 212 | 587 | 1.88e-89 | 281 |
MS.gene065049.t1 | MTR_2g073500 | 42.687 | 335 | 167 | 8 | 53 | 378 | 27 | 345 | 2.62e-89 | 273 |
MS.gene065049.t1 | MTR_0136s0010 | 41.210 | 347 | 184 | 7 | 50 | 378 | 165 | 509 | 3.85e-88 | 276 |
MS.gene065049.t1 | MTR_2g073510 | 39.339 | 333 | 181 | 6 | 51 | 374 | 29 | 349 | 2.04e-87 | 268 |
MS.gene065049.t1 | MTR_5g034810 | 40.719 | 334 | 176 | 7 | 53 | 378 | 33 | 352 | 1.17e-86 | 266 |
MS.gene065049.t1 | MTR_7g109550 | 37.015 | 335 | 188 | 5 | 55 | 374 | 137 | 463 | 7.46e-85 | 266 |
MS.gene065049.t1 | MTR_4g079700 | 37.725 | 334 | 181 | 8 | 55 | 378 | 47 | 363 | 9.07e-85 | 262 |
MS.gene065049.t1 | MTR_7g068920 | 40.058 | 347 | 184 | 8 | 53 | 378 | 78 | 421 | 1.04e-84 | 264 |
MS.gene065049.t1 | MTR_5g033800 | 37.260 | 365 | 206 | 9 | 30 | 378 | 126 | 483 | 1.91e-84 | 265 |
MS.gene065049.t1 | MTR_5g059400 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 3.90e-84 | 265 |
MS.gene065049.t1 | MTR_1g116130 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 3.90e-84 | 265 |
MS.gene065049.t1 | MTR_3g070900 | 40.517 | 348 | 171 | 10 | 55 | 374 | 106 | 445 | 5.40e-83 | 260 |
MS.gene065049.t1 | MTR_8g463790 | 39.595 | 346 | 180 | 10 | 55 | 378 | 71 | 409 | 1.88e-82 | 258 |
MS.gene065049.t1 | MTR_4g087730 | 37.234 | 376 | 206 | 10 | 12 | 378 | 8 | 362 | 2.97e-82 | 255 |
MS.gene065049.t1 | MTR_4g088030 | 36.556 | 331 | 190 | 6 | 55 | 378 | 33 | 350 | 6.09e-82 | 254 |
MS.gene065049.t1 | MTR_4g014440 | 37.037 | 351 | 199 | 9 | 50 | 378 | 57 | 407 | 3.18e-81 | 254 |
MS.gene065049.t1 | MTR_4g126950 | 34.896 | 384 | 220 | 8 | 21 | 378 | 67 | 446 | 1.12e-80 | 254 |
MS.gene065049.t1 | MTR_5g082880 | 40.227 | 353 | 172 | 11 | 53 | 374 | 163 | 507 | 7.40e-80 | 254 |
MS.gene065049.t1 | MTR_3g021090 | 35.127 | 353 | 206 | 7 | 30 | 374 | 7 | 344 | 1.18e-78 | 248 |
MS.gene065049.t1 | MTR_3g035830 | 35.211 | 355 | 207 | 7 | 30 | 376 | 7 | 346 | 1.50e-78 | 245 |
MS.gene065049.t1 | MTR_3g071650 | 35.969 | 392 | 222 | 10 | 14 | 378 | 41 | 430 | 3.51e-78 | 247 |
MS.gene065049.t1 | MTR_1g111010 | 40.361 | 332 | 172 | 12 | 53 | 378 | 30 | 341 | 4.65e-78 | 244 |
MS.gene065049.t1 | MTR_4g121560 | 35.263 | 380 | 220 | 8 | 21 | 378 | 78 | 453 | 5.10e-78 | 248 |
MS.gene065049.t1 | MTR_3g021060 | 34.473 | 351 | 197 | 7 | 34 | 376 | 36 | 361 | 5.05e-76 | 239 |
MS.gene065049.t1 | MTR_5g083260 | 37.971 | 345 | 190 | 9 | 55 | 378 | 83 | 424 | 6.24e-76 | 241 |
MS.gene065049.t1 | MTR_8g069790 | 35.988 | 339 | 200 | 7 | 52 | 374 | 175 | 512 | 3.22e-75 | 242 |
MS.gene065049.t1 | MTR_3g464570 | 41.111 | 270 | 142 | 4 | 118 | 374 | 3 | 268 | 6.12e-74 | 231 |
MS.gene065049.t1 | MTR_7g070060 | 34.870 | 347 | 204 | 9 | 54 | 378 | 63 | 409 | 8.65e-74 | 235 |
MS.gene065049.t1 | MTR_4g014430 | 35.244 | 349 | 207 | 7 | 47 | 378 | 100 | 446 | 8.37e-73 | 234 |
MS.gene065049.t1 | MTR_1g058380 | 34.243 | 403 | 231 | 10 | 1 | 378 | 1 | 394 | 3.21e-71 | 228 |
MS.gene065049.t1 | MTR_7g094750 | 35.260 | 346 | 198 | 8 | 55 | 378 | 91 | 432 | 5.14e-67 | 219 |
MS.gene065049.t1 | MTR_2g022560 | 34.054 | 370 | 208 | 9 | 32 | 376 | 77 | 435 | 9.09e-67 | 218 |
MS.gene065049.t1 | MTR_3g090120 | 35.638 | 376 | 204 | 9 | 25 | 378 | 100 | 459 | 3.66e-63 | 209 |
MS.gene065049.t1 | MTR_8g093530 | 33.724 | 341 | 199 | 6 | 53 | 378 | 88 | 416 | 1.01e-61 | 204 |
MS.gene065049.t1 | MTR_5g033800 | 37.165 | 261 | 147 | 6 | 30 | 279 | 126 | 380 | 4.03e-57 | 191 |
MS.gene065049.t1 | MTR_7g070060 | 37.021 | 235 | 139 | 5 | 54 | 279 | 63 | 297 | 6.15e-54 | 181 |
MS.gene065049.t1 | MTR_7g070060 | 31.741 | 293 | 180 | 7 | 106 | 378 | 15 | 307 | 6.05e-51 | 173 |
MS.gene065049.t1 | MTR_7g094750 | 34.454 | 238 | 143 | 3 | 55 | 279 | 91 | 328 | 3.26e-48 | 166 |
MS.gene065049.t1 | MTR_6g061710 | 29.459 | 370 | 215 | 12 | 40 | 374 | 152 | 510 | 2.53e-44 | 160 |
MS.gene065049.t1 | MTR_1g076690 | 30.110 | 362 | 193 | 15 | 55 | 374 | 223 | 566 | 2.41e-40 | 150 |
MS.gene065049.t1 | MTR_5g069320 | 30.466 | 279 | 152 | 6 | 98 | 371 | 145 | 386 | 1.61e-39 | 145 |
MS.gene065049.t1 | MTR_8g027900 | 27.596 | 366 | 224 | 13 | 40 | 374 | 196 | 551 | 5.58e-36 | 138 |
MS.gene065049.t1 | MTR_8g093870 | 28.451 | 355 | 208 | 15 | 53 | 376 | 131 | 470 | 8.76e-36 | 136 |
MS.gene065049.t1 | MTR_7g019120 | 29.745 | 353 | 208 | 12 | 51 | 374 | 75 | 416 | 2.66e-35 | 134 |
MS.gene065049.t1 | MTR_5g035090 | 27.596 | 366 | 212 | 13 | 46 | 374 | 74 | 423 | 4.40e-35 | 134 |
MS.gene065049.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 262 | 605 | 9.71e-35 | 135 |
MS.gene065049.t1 | MTR_8g099300 | 27.020 | 396 | 246 | 14 | 11 | 374 | 31 | 415 | 1.68e-34 | 132 |
MS.gene065049.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 332 | 675 | 2.56e-34 | 134 |
MS.gene065049.t1 | MTR_3g109840 | 28.169 | 355 | 204 | 13 | 55 | 374 | 73 | 411 | 1.47e-33 | 129 |
MS.gene065049.t1 | MTR_8g104970 | 27.869 | 366 | 212 | 15 | 46 | 374 | 111 | 461 | 2.11e-33 | 130 |
MS.gene065049.t1 | MTR_6g016880 | 26.161 | 409 | 251 | 14 | 7 | 374 | 17 | 415 | 4.68e-33 | 128 |
MS.gene065049.t1 | MTR_4g092830 | 27.920 | 351 | 214 | 11 | 55 | 375 | 48 | 389 | 5.14e-33 | 128 |
MS.gene065049.t1 | MTR_6g007777 | 27.901 | 362 | 207 | 15 | 53 | 378 | 114 | 457 | 7.15e-33 | 128 |
MS.gene065049.t1 | MTR_5g035150 | 26.776 | 366 | 209 | 13 | 50 | 374 | 80 | 427 | 2.95e-32 | 126 |
MS.gene065049.t1 | MTR_2g016060 | 28.652 | 356 | 196 | 13 | 59 | 374 | 59 | 396 | 9.52e-32 | 124 |
MS.gene065049.t1 | MTR_5g035080 | 27.451 | 357 | 207 | 13 | 55 | 374 | 75 | 416 | 9.24e-31 | 122 |
MS.gene065049.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 168 | 510 | 9.95e-31 | 122 |
MS.gene065049.t1 | MTR_4g125060 | 27.642 | 369 | 215 | 16 | 45 | 376 | 116 | 469 | 1.04e-30 | 122 |
MS.gene065049.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 197 | 539 | 1.29e-30 | 122 |
MS.gene065049.t1 | MTR_5g035070 | 29.944 | 354 | 203 | 13 | 55 | 374 | 87 | 429 | 1.47e-30 | 121 |
MS.gene065049.t1 | MTR_6g016875 | 27.042 | 355 | 214 | 10 | 53 | 374 | 62 | 404 | 2.20e-29 | 118 |
MS.gene065049.t1 | MTR_6g016240 | 26.764 | 411 | 237 | 16 | 8 | 374 | 22 | 412 | 1.25e-25 | 107 |
MS.gene065049.t1 | MTR_7g019140 | 46.875 | 96 | 50 | 1 | 51 | 145 | 75 | 170 | 1.54e-23 | 96.3 |
MS.gene065049.t1 | MTR_5g035120 | 39.216 | 102 | 61 | 1 | 44 | 144 | 64 | 165 | 9.00e-20 | 86.3 |
MS.gene065049.t1 | MTR_3g021150 | 33.645 | 107 | 64 | 2 | 240 | 339 | 1 | 107 | 2.34e-16 | 75.1 |
MS.gene065049.t1 | MTR_2g022580 | 35.593 | 118 | 64 | 3 | 115 | 220 | 3 | 120 | 1.49e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065049.t1 | AT3G54260 | 61.478 | 379 | 132 | 6 | 2 | 376 | 4 | 372 | 1.27e-172 | 486 |
MS.gene065049.t1 | AT5G58600 | 40.237 | 338 | 185 | 6 | 55 | 378 | 66 | 400 | 8.57e-93 | 284 |
MS.gene065049.t1 | AT2G31110 | 38.462 | 364 | 198 | 7 | 21 | 374 | 11 | 358 | 7.42e-92 | 280 |
MS.gene065049.t1 | AT1G29050 | 41.088 | 331 | 175 | 5 | 55 | 378 | 61 | 378 | 1.43e-91 | 280 |
MS.gene065049.t1 | AT2G34070 | 39.823 | 339 | 181 | 7 | 49 | 378 | 59 | 383 | 1.39e-89 | 275 |
MS.gene065049.t1 | AT2G30900 | 40.841 | 333 | 174 | 8 | 53 | 374 | 41 | 361 | 1.62e-89 | 274 |
MS.gene065049.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 34 | 378 | 5.56e-86 | 265 |
MS.gene065049.t1 | AT3G62390 | 38.576 | 337 | 187 | 6 | 53 | 374 | 136 | 467 | 2.03e-85 | 267 |
MS.gene065049.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 90 | 434 | 2.25e-85 | 266 |
MS.gene065049.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 56 | 396 | 2.84e-85 | 264 |
MS.gene065049.t1 | AT5G06700 | 37.978 | 366 | 202 | 7 | 37 | 378 | 230 | 594 | 3.54e-85 | 270 |
MS.gene065049.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 99 | 439 | 6.37e-85 | 265 |
MS.gene065049.t1 | AT2G42570 | 38.507 | 335 | 180 | 7 | 54 | 378 | 46 | 364 | 1.65e-83 | 259 |
MS.gene065049.t1 | AT1G78710 | 38.298 | 329 | 182 | 7 | 54 | 374 | 37 | 352 | 1.67e-83 | 258 |
MS.gene065049.t1 | AT3G12060 | 37.666 | 377 | 206 | 9 | 28 | 378 | 162 | 535 | 3.61e-83 | 264 |
MS.gene065049.t1 | AT1G73140 | 38.728 | 346 | 187 | 8 | 53 | 378 | 65 | 405 | 3.93e-83 | 259 |
MS.gene065049.t1 | AT3G55990 | 37.772 | 368 | 199 | 9 | 29 | 374 | 120 | 479 | 6.30e-82 | 258 |
MS.gene065049.t1 | AT2G40150 | 38.636 | 352 | 180 | 9 | 54 | 374 | 70 | 416 | 2.07e-81 | 255 |
MS.gene065049.t1 | AT5G20590 | 38.663 | 344 | 190 | 8 | 53 | 378 | 139 | 479 | 5.61e-81 | 256 |
MS.gene065049.t1 | AT5G49340 | 37.571 | 354 | 199 | 8 | 45 | 378 | 90 | 441 | 3.88e-80 | 253 |
MS.gene065049.t1 | AT1G60790 | 36.416 | 346 | 199 | 9 | 49 | 374 | 184 | 528 | 2.74e-79 | 253 |
MS.gene065049.t1 | AT3G14850 | 37.273 | 330 | 184 | 7 | 55 | 374 | 34 | 350 | 5.43e-79 | 247 |
MS.gene065049.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 116 | 457 | 9.90e-79 | 249 |
MS.gene065049.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.02e-78 | 249 |
MS.gene065049.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.02e-78 | 249 |
MS.gene065049.t1 | AT2G40160 | 37.176 | 347 | 195 | 9 | 55 | 378 | 77 | 423 | 3.35e-78 | 248 |
MS.gene065049.t1 | AT2G40160 | 36.888 | 347 | 196 | 9 | 55 | 378 | 77 | 423 | 4.08e-78 | 247 |
MS.gene065049.t1 | AT3G11030 | 37.609 | 343 | 195 | 7 | 55 | 378 | 106 | 448 | 1.39e-76 | 244 |
MS.gene065049.t1 | AT2G38320 | 32.161 | 398 | 243 | 10 | 3 | 378 | 12 | 404 | 8.54e-75 | 238 |
MS.gene065049.t1 | AT2G40320 | 34.343 | 396 | 235 | 9 | 8 | 378 | 27 | 422 | 1.15e-73 | 235 |
MS.gene065049.t1 | AT1G48880 | 35.345 | 348 | 180 | 8 | 54 | 378 | 114 | 439 | 1.13e-67 | 220 |
MS.gene065049.t1 | AT2G31110 | 38.583 | 254 | 153 | 3 | 20 | 272 | 10 | 261 | 1.39e-66 | 212 |
MS.gene065049.t1 | AT5G19160 | 34.133 | 375 | 209 | 9 | 33 | 376 | 75 | 442 | 1.81e-66 | 218 |
MS.gene065049.t1 | AT5G58600 | 41.410 | 227 | 130 | 3 | 55 | 279 | 66 | 291 | 3.86e-65 | 209 |
MS.gene065049.t1 | AT3G62390 | 41.176 | 238 | 129 | 3 | 53 | 279 | 136 | 373 | 4.39e-65 | 213 |
MS.gene065049.t1 | AT3G06080 | 35.028 | 354 | 195 | 9 | 50 | 376 | 98 | 443 | 9.14e-65 | 213 |
MS.gene065049.t1 | AT2G38320 | 33.645 | 321 | 193 | 7 | 78 | 378 | 1 | 321 | 9.19e-65 | 209 |
MS.gene065049.t1 | AT2G30900 | 42.609 | 230 | 127 | 5 | 53 | 279 | 41 | 268 | 1.49e-64 | 207 |
MS.gene065049.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 19 | 364 | 1.27e-62 | 205 |
MS.gene065049.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 60 | 405 | 2.64e-62 | 206 |
MS.gene065049.t1 | AT2G34070 | 38.783 | 263 | 139 | 6 | 124 | 378 | 1 | 249 | 2.77e-62 | 200 |
MS.gene065049.t1 | AT3G11570 | 31.566 | 396 | 232 | 10 | 8 | 378 | 38 | 419 | 5.61e-61 | 202 |
MS.gene065049.t1 | AT2G40160 | 39.407 | 236 | 132 | 6 | 55 | 279 | 77 | 312 | 1.20e-56 | 188 |
MS.gene065049.t1 | AT1G78710 | 31.624 | 351 | 173 | 10 | 30 | 374 | 3 | 292 | 8.25e-56 | 185 |
MS.gene065049.t1 | AT5G20590 | 38.750 | 240 | 134 | 5 | 53 | 279 | 139 | 378 | 7.52e-54 | 182 |
MS.gene065049.t1 | AT5G19160 | 37.037 | 243 | 140 | 4 | 50 | 279 | 94 | 336 | 1.68e-50 | 173 |
MS.gene065049.t1 | AT3G14850 | 35.000 | 260 | 147 | 6 | 124 | 374 | 1 | 247 | 9.48e-50 | 168 |
MS.gene065049.t1 | AT3G06080 | 35.802 | 243 | 143 | 4 | 50 | 279 | 98 | 340 | 1.21e-48 | 168 |
MS.gene065049.t1 | AT2G31110 | 39.908 | 218 | 106 | 6 | 166 | 374 | 9 | 210 | 2.37e-48 | 163 |
MS.gene065049.t1 | AT5G06230 | 34.959 | 246 | 141 | 4 | 53 | 279 | 60 | 305 | 1.43e-45 | 159 |
MS.gene065049.t1 | AT1G70230 | 30.447 | 358 | 190 | 14 | 55 | 378 | 79 | 411 | 1.31e-40 | 148 |
MS.gene065049.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.65e-39 | 147 |
MS.gene065049.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.65e-39 | 147 |
MS.gene065049.t1 | AT5G51640 | 28.912 | 377 | 223 | 13 | 31 | 374 | 120 | 484 | 1.51e-38 | 144 |
MS.gene065049.t1 | AT1G01430 | 26.216 | 370 | 237 | 12 | 35 | 374 | 80 | 443 | 3.54e-38 | 142 |
MS.gene065049.t1 | AT5G64020 | 27.606 | 355 | 219 | 15 | 55 | 376 | 57 | 406 | 4.08e-37 | 139 |
MS.gene065049.t1 | AT4G01080 | 28.693 | 352 | 211 | 12 | 51 | 374 | 87 | 426 | 4.13e-37 | 139 |
MS.gene065049.t1 | AT3G28150 | 28.713 | 404 | 215 | 18 | 12 | 376 | 39 | 408 | 1.64e-34 | 132 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 95 | 457 | 5.08e-34 | 131 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 189 | 551 | 9.84e-34 | 132 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 189 | 551 | 9.84e-34 | 132 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 189 | 551 | 9.84e-34 | 132 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 189 | 551 | 9.84e-34 | 132 |
MS.gene065049.t1 | AT2G37720 | 28.125 | 352 | 217 | 15 | 53 | 378 | 141 | 482 | 1.01e-33 | 130 |
MS.gene065049.t1 | AT5G20680 | 28.312 | 385 | 217 | 16 | 31 | 378 | 171 | 533 | 1.27e-33 | 131 |
MS.gene065049.t1 | AT5G15900 | 30.280 | 393 | 205 | 17 | 26 | 378 | 46 | 409 | 1.84e-33 | 129 |
MS.gene065049.t1 | AT5G15890 | 27.841 | 352 | 214 | 10 | 49 | 374 | 181 | 518 | 2.08e-33 | 130 |
MS.gene065049.t1 | AT5G15900 | 30.280 | 393 | 205 | 17 | 26 | 378 | 65 | 428 | 2.61e-33 | 129 |
MS.gene065049.t1 | AT4G11090 | 28.261 | 414 | 244 | 18 | 1 | 374 | 21 | 421 | 7.89e-33 | 127 |
MS.gene065049.t1 | AT5G64470 | 26.377 | 345 | 222 | 10 | 55 | 375 | 55 | 391 | 2.32e-31 | 123 |
MS.gene065049.t1 | AT5G64470 | 26.211 | 351 | 221 | 11 | 55 | 375 | 55 | 397 | 5.67e-31 | 122 |
MS.gene065049.t1 | AT2G14530 | 26.741 | 359 | 214 | 10 | 55 | 378 | 62 | 406 | 6.34e-31 | 122 |
MS.gene065049.t1 | AT4G23790 | 27.424 | 361 | 209 | 14 | 53 | 374 | 77 | 423 | 1.89e-30 | 121 |
MS.gene065049.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 127 | 464 | 2.50e-29 | 118 |
MS.gene065049.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 135 | 472 | 2.77e-29 | 118 |
MS.gene065049.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.07e-21 | 93.6 |
MS.gene065049.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 4.35e-21 | 93.2 |
Find 94 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | 1.2:-83025959 | MS.gene065049:CDS |
GTGATTTCTCAGTTGGAAAA+TGG | 0.208372 | 1.2:-83027356 | MS.gene065049:CDS |
AGACATCAATTGAGTTCTTC+TGG | 0.226253 | 1.2:-83026720 | MS.gene065049:CDS |
ATTTCTTCCATGAATCTCTT+TGG | 0.226552 | 1.2:+83027379 | None:intergenic |
GCTCATTGGTGGACTCATTC+TGG | 0.278727 | 1.2:-83026580 | MS.gene065049:CDS |
TGATTAAATTGTAGGCAAAA+TGG | 0.281278 | 1.2:-83026224 | MS.gene065049:intron |
AAAGTGGGTGGATTTGAATT+TGG | 0.291594 | 1.2:-83026357 | MS.gene065049:CDS |
TTTCTTCCATGAATCTCTTT+GGG | 0.298282 | 1.2:+83027380 | None:intergenic |
AGCATTTCGTTCCAAATATC+AGG | 0.327867 | 1.2:+83025948 | None:intergenic |
TTCAGCCACATGCATGTTCC+AGG | 0.356693 | 1.2:-83026164 | MS.gene065049:CDS |
GTAATATCCTGTAGATATAC+TGG | 0.367331 | 1.2:+83026098 | None:intergenic |
GGACCAGTAGTAGTGCTAAA+AGG | 0.371991 | 1.2:-83026143 | MS.gene065049:CDS |
TAATAAGAGAATTCTACATT+TGG | 0.381121 | 1.2:-83026662 | MS.gene065049:CDS |
TTGAAGAGAATGCAAGGTAT+TGG | 0.381566 | 1.2:-83026633 | MS.gene065049:CDS |
TATTCCAACCGACAGGAAAA+AGG | 0.389139 | 1.2:-83026865 | MS.gene065049:CDS |
ATAGCATGGAAAGACATTAA+AGG | 0.392314 | 1.2:+83026828 | None:intergenic |
TTCTTCCAATGCAAGCCAAC+TGG | 0.394214 | 1.2:+83027428 | None:intergenic |
TGCAGCCATTGGTGCCTCCC+TGG | 0.399442 | 1.2:-83025975 | MS.gene065049:CDS |
TTTAATGTCTTTCCATGCTA+TGG | 0.404785 | 1.2:-83026826 | MS.gene065049:intron |
TTGCATTTGATTCAGCTCAT+TGG | 0.406976 | 1.2:-83026594 | MS.gene065049:CDS |
TTCTTCAGTTCTACCAATAG+TGG | 0.407885 | 1.2:+83026694 | None:intergenic |
TGTATTGAGTCCTTTCTCAT+AGG | 0.414458 | 1.2:+83026385 | None:intergenic |
GTTCTTCTGGGCACCACTAT+TGG | 0.416633 | 1.2:-83026707 | MS.gene065049:CDS |
CATTTGATTCAGCTCATTGG+TGG | 0.419213 | 1.2:-83026591 | MS.gene065049:CDS |
GACATCAATTGAGTTCTTCT+GGG | 0.424420 | 1.2:-83026719 | MS.gene065049:CDS |
AAGAAATGTGATTTCTCAGT+TGG | 0.430768 | 1.2:-83027363 | MS.gene065049:CDS |
TTTGATGCACTGAAGTATCT+TGG | 0.440296 | 1.2:-83026975 | MS.gene065049:CDS |
AAATGGAAGTGGAAGCCATT+AGG | 0.444002 | 1.2:-83027234 | MS.gene065049:CDS |
AGACATTAAAGGACCATCAT+AGG | 0.444756 | 1.2:+83026839 | None:intergenic |
CATTTCTCATAATCTGAATC+CGG | 0.445205 | 1.2:+83027252 | None:intergenic |
CTTGGGATGGAACAACCTAA+TGG | 0.446475 | 1.2:+83027219 | None:intergenic |
AGTCCTCTGATTGCAGCCAT+TGG | 0.458504 | 1.2:-83025986 | MS.gene065049:CDS |
CGGATTCAGATTATGAGAAA+TGG | 0.459664 | 1.2:-83027251 | MS.gene065049:CDS |
TTCTATAATGAGAAACCAAT+GGG | 0.468469 | 1.2:-83026916 | MS.gene065049:CDS |
GTATGGCACCTAGACATAAC+AGG | 0.470822 | 1.2:-83026304 | MS.gene065049:intron |
TTCCAAATATCAGGCACACC+AGG | 0.474779 | 1.2:+83025957 | None:intergenic |
TGCAAACCCAAAGAGATTCA+TGG | 0.480389 | 1.2:-83027386 | MS.gene065049:CDS |
AGTGTCCAGTTGGCTTGCAT+TGG | 0.481051 | 1.2:-83027433 | MS.gene065049:CDS |
TCTCTTGTATGCTTAGTTCA+AGG | 0.493508 | 1.2:-83026891 | MS.gene065049:CDS |
CATCACAAACATGAATCAAA+TGG | 0.494804 | 1.2:-83026411 | MS.gene065049:CDS |
CAAATGGTTGCCTATGAGAA+AGG | 0.503172 | 1.2:-83026395 | MS.gene065049:CDS |
GAGATTTCCAGTATATCTAC+AGG | 0.504762 | 1.2:-83026105 | MS.gene065049:CDS |
GCAGTAACTTGTCAAAAGAA+TGG | 0.505516 | 1.2:-83027279 | MS.gene065049:CDS |
GTTGGAAATGTTACAATCAA+AGG | 0.507595 | 1.2:-83026202 | MS.gene065049:CDS |
AGCCAACTGGACACTTCCGC+TGG | 0.508129 | 1.2:+83027441 | None:intergenic |
TAAATTGTAGGCAAAATGGT+TGG | 0.508760 | 1.2:-83026220 | MS.gene065049:intron |
ATGAGAAAGGACTCAATACA+TGG | 0.509591 | 1.2:-83026382 | MS.gene065049:CDS |
TTTAGCACTACTACTGGTCC+TGG | 0.509768 | 1.2:+83026146 | None:intergenic |
TATTGGTAGAACTGAAGAAA+GGG | 0.514662 | 1.2:-83026690 | MS.gene065049:CDS |
TACCAGGTGGGATTATTACA+TGG | 0.524110 | 1.2:-83026447 | MS.gene065049:intron |
GCACACCAGGGAGGCACCAA+TGG | 0.532334 | 1.2:+83025970 | None:intergenic |
GTTACTGCAGTGGCGAGATA+AGG | 0.535012 | 1.2:+83027294 | None:intergenic |
CAGATTATGAGAAATGGAAG+TGG | 0.537613 | 1.2:-83027245 | MS.gene065049:CDS |
CTATTGGTAGAACTGAAGAA+AGG | 0.537856 | 1.2:-83026691 | MS.gene065049:CDS |
ACATCCTTCAGTGTATAGTA+AGG | 0.542161 | 1.2:-83026048 | MS.gene065049:CDS |
AGCATACAAGAGATTCCCAT+TGG | 0.544133 | 1.2:+83026901 | None:intergenic |
GACTCAATACATGGGCAAAG+TGG | 0.544827 | 1.2:-83026373 | MS.gene065049:CDS |
ATGACTGCATTTAGAAGAGA+TGG | 0.549263 | 1.2:-83026071 | MS.gene065049:CDS |
GAGAGGCAGAAACAAGGTAA+TGG | 0.549704 | 1.2:-83026011 | MS.gene065049:CDS |
ATTCTATAATGAGAAACCAA+TGG | 0.550938 | 1.2:-83026917 | MS.gene065049:CDS |
AAGGAGTTATTCCAACCGAC+AGG | 0.552744 | 1.2:-83026872 | MS.gene065049:CDS |
ATTAATATCCTACCATAGCA+TGG | 0.553143 | 1.2:+83026814 | None:intergenic |
CATTAGGTTGTTCCATCCCA+AGG | 0.558505 | 1.2:-83027218 | MS.gene065049:intron |
AGGTAATAAGTGAAGAAGAG+AGG | 0.559968 | 1.2:-83026028 | MS.gene065049:CDS |
GACAGTTGGAATCATAGAGA+GGG | 0.562013 | 1.2:+83027316 | None:intergenic |
AGTACGTACCTGTTATGTCT+AGG | 0.567486 | 1.2:+83026296 | None:intergenic |
GCACCAATGGCTGCAATCAG+AGG | 0.571338 | 1.2:+83025983 | None:intergenic |
GTTTCATCATCACCTTGGGA+TGG | 0.572029 | 1.2:+83027206 | None:intergenic |
TTGTCAAAAGAATGGACGGC+CGG | 0.574038 | 1.2:-83027271 | MS.gene065049:CDS |
ACTCAATACATGGGCAAAGT+GGG | 0.582566 | 1.2:-83026372 | MS.gene065049:CDS |
GAGAGGAAAGAGAATGATGT+TGG | 0.587409 | 1.2:-83026946 | MS.gene065049:CDS |
AATGGCTGCAATCAGAGGAC+TGG | 0.587580 | 1.2:+83025988 | None:intergenic |
GAGAATGCAAGGTATTGGAA+AGG | 0.589108 | 1.2:-83026628 | MS.gene065049:CDS |
ATTTGATTGAAGAGAATGCA+AGG | 0.595081 | 1.2:-83026639 | MS.gene065049:CDS |
AAGTATCTTGGTAAAATGAG+AGG | 0.596417 | 1.2:-83026963 | MS.gene065049:CDS |
AGGTGGGATTATTACATGGA+AGG | 0.598017 | 1.2:-83026443 | MS.gene065049:CDS |
CAATACATGGGCAAAGTGGG+TGG | 0.598037 | 1.2:-83026369 | MS.gene065049:CDS |
ATTACCTTACTATACACTGA+AGG | 0.598619 | 1.2:+83026044 | None:intergenic |
ATCCAGCGGAAGTGTCCAGT+TGG | 0.606027 | 1.2:-83027443 | MS.gene065049:CDS |
GTTGGAATCATAGAGAGGGT+AGG | 0.612157 | 1.2:+83027320 | None:intergenic |
TAACTTGTCAAAAGAATGGA+CGG | 0.614689 | 1.2:-83027275 | MS.gene065049:CDS |
GGAACGAAATGCTGAGTGCA+TGG | 0.615044 | 1.2:-83025938 | MS.gene065049:CDS |
GAAGAAGAGAGGCAGAAACA+AGG | 0.633633 | 1.2:-83026017 | MS.gene065049:CDS |
GGACAGTTGGAATCATAGAG+AGG | 0.634353 | 1.2:+83027315 | None:intergenic |
TCCAAATATCAGGCACACCA+GGG | 0.635948 | 1.2:+83025958 | None:intergenic |
AGTGGCGAGATAAGGACAGT+TGG | 0.638580 | 1.2:+83027302 | None:intergenic |
GGAAAGAGAATGATGTTGGT+GGG | 0.640717 | 1.2:-83026942 | MS.gene065049:CDS |
AGGAAAGAGAATGATGTTGG+TGG | 0.644337 | 1.2:-83026943 | MS.gene065049:CDS |
AGTAGTAGTGCTAAAAGGAG+TGG | 0.649261 | 1.2:-83026138 | MS.gene065049:CDS |
TGAGAAAGGACTCAATACAT+GGG | 0.677756 | 1.2:-83026381 | MS.gene065049:CDS |
CTGGTCCTGGAACATGCATG+TGG | 0.678164 | 1.2:+83026159 | None:intergenic |
ATTATCACTGATCAATCCAG+CGG | 0.715885 | 1.2:-83027457 | MS.gene065049:CDS |
AAATATCAGGCACACCAGGG+AGG | 0.749580 | 1.2:+83025961 | None:intergenic |
AGAAACTGAAGATGTCAACA+TGG | 0.749769 | 1.2:-83027409 | MS.gene065049:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAACATTTGATTAAATTGT+AGG | - | chr1.2:83027219-83027238 | MS.gene065049:CDS | 20.0% |
!! | ATAAAAATGACAGTAAATGA+AGG | + | chr1.2:83025949-83025968 | None:intergenic | 20.0% |
!! | TAATAAGAGAATTCTACATT+TGG | - | chr1.2:83026789-83026808 | MS.gene065049:intron | 20.0% |
!!! | CATTTTTAGAAGGAAAATTA+AGG | + | chr1.2:83026674-83026693 | None:intergenic | 20.0% |
!!! | GTAAGTAAATCATTTTTAGA+AGG | + | chr1.2:83026684-83026703 | None:intergenic | 20.0% |
!!! | TAATCATTTTTACATCCTAA+TGG | - | chr1.2:83026965-83026984 | MS.gene065049:CDS | 20.0% |
! | AAGCATGTAAGAAAACAAAA+AGG | + | chr1.2:83026291-83026310 | None:intergenic | 25.0% |
! | AATCAATCTTGATTAATACC+AGG | - | chr1.2:83026988-83027007 | MS.gene065049:intron | 25.0% |
! | ATTCTATAATGAGAAACCAA+TGG | - | chr1.2:83026534-83026553 | MS.gene065049:intron | 25.0% |
! | TGATTAAATTGTAGGCAAAA+TGG | - | chr1.2:83027227-83027246 | MS.gene065049:CDS | 25.0% |
! | TTCTATAATGAGAAACCAAT+GGG | - | chr1.2:83026535-83026554 | MS.gene065049:intron | 25.0% |
!! | TAATCAAGATTGATTCCATT+AGG | + | chr1.2:83026983-83027002 | None:intergenic | 25.0% |
!!! | CTGTCATTTTTATTCTTCTT+AGG | - | chr1.2:83025956-83025975 | MS.gene065049:CDS | 25.0% |
AAGAAATGTGATTTCTCAGT+TGG | - | chr1.2:83026088-83026107 | MS.gene065049:CDS | 30.0% | |
AAGTATCTTGGTAAAATGAG+AGG | - | chr1.2:83026488-83026507 | MS.gene065049:intron | 30.0% | |
AATCTTGATTAATACCAGGT+GGG | - | chr1.2:83026992-83027011 | MS.gene065049:intron | 30.0% | |
ACATGTTGTTCACTTATTAC+AGG | - | chr1.2:83026702-83026721 | MS.gene065049:CDS | 30.0% | |
AGAAGCTAAATTTATCAGCA+TGG | + | chr1.2:83026440-83026459 | None:intergenic | 30.0% | |
ATAGCATGGAAAGACATTAA+AGG | + | chr1.2:83026626-83026645 | None:intergenic | 30.0% | |
ATTAATATCCTACCATAGCA+TGG | + | chr1.2:83026640-83026659 | None:intergenic | 30.0% | |
ATTACCTTACTATACACTGA+AGG | + | chr1.2:83027410-83027429 | None:intergenic | 30.0% | |
ATTTCTTCCATGAATCTCTT+TGG | + | chr1.2:83026075-83026094 | None:intergenic | 30.0% | |
ATTTGATTGAAGAGAATGCA+AGG | - | chr1.2:83026812-83026831 | MS.gene065049:intron | 30.0% | |
CATCACAAACATGAATCAAA+TGG | - | chr1.2:83027040-83027059 | MS.gene065049:intron | 30.0% | |
CATTTCTCATAATCTGAATC+CGG | + | chr1.2:83026202-83026221 | None:intergenic | 30.0% | |
GTAATATCCTGTAGATATAC+TGG | + | chr1.2:83027356-83027375 | None:intergenic | 30.0% | |
GTTGGAAATGTTACAATCAA+AGG | - | chr1.2:83027249-83027268 | MS.gene065049:CDS | 30.0% | |
TAAATTGTAGGCAAAATGGT+TGG | - | chr1.2:83027231-83027250 | MS.gene065049:CDS | 30.0% | |
TAATGTTTCATCATCACCTT+GGG | + | chr1.2:83026252-83026271 | None:intergenic | 30.0% | |
TATTGGTAGAACTGAAGAAA+GGG | - | chr1.2:83026761-83026780 | MS.gene065049:intron | 30.0% | |
TTAATGTTTCATCATCACCT+TGG | + | chr1.2:83026253-83026272 | None:intergenic | 30.0% | |
TTTAATGTCTTTCCATGCTA+TGG | - | chr1.2:83026625-83026644 | MS.gene065049:CDS | 30.0% | |
TTTCTTCCATGAATCTCTTT+GGG | + | chr1.2:83026074-83026093 | None:intergenic | 30.0% | |
! | ATGTGGCTGAAATATTTTAC+AGG | + | chr1.2:83027278-83027297 | None:intergenic | 30.0% |
! | TAACTTGTCAAAAGAATGGA+CGG | - | chr1.2:83026176-83026195 | MS.gene065049:CDS | 30.0% |
! | TGCAACATTTTTGACATGTA+TGG | - | chr1.2:83026315-83026334 | MS.gene065049:CDS | 30.0% |
ACATCCTTCAGTGTATAGTA+AGG | - | chr1.2:83027403-83027422 | MS.gene065049:CDS | 35.0% | |
AGAAACTGAAGATGTCAACA+TGG | - | chr1.2:83026042-83026061 | MS.gene065049:CDS | 35.0% | |
AGACATCAATTGAGTTCTTC+TGG | - | chr1.2:83026731-83026750 | MS.gene065049:intron | 35.0% | |
AGACATTAAAGGACCATCAT+AGG | + | chr1.2:83026615-83026634 | None:intergenic | 35.0% | |
AGCATTTCGTTCCAAATATC+AGG | + | chr1.2:83027506-83027525 | None:intergenic | 35.0% | |
AGGTAATAAGTGAAGAAGAG+AGG | - | chr1.2:83027423-83027442 | MS.gene065049:CDS | 35.0% | |
ATGACTGCATTTAGAAGAGA+TGG | - | chr1.2:83027380-83027399 | MS.gene065049:CDS | 35.0% | |
ATGAGAAAGGACTCAATACA+TGG | - | chr1.2:83027069-83027088 | MS.gene065049:intron | 35.0% | |
ATTATCACTGATCAATCCAG+CGG | - | chr1.2:83025994-83026013 | MS.gene065049:CDS | 35.0% | |
CAATCTTGATTAATACCAGG+TGG | - | chr1.2:83026991-83027010 | MS.gene065049:intron | 35.0% | |
CAGATTATGAGAAATGGAAG+TGG | - | chr1.2:83026206-83026225 | MS.gene065049:CDS | 35.0% | |
CGGATTCAGATTATGAGAAA+TGG | - | chr1.2:83026200-83026219 | MS.gene065049:CDS | 35.0% | |
CTATTGGTAGAACTGAAGAA+AGG | - | chr1.2:83026760-83026779 | MS.gene065049:intron | 35.0% | |
GACATCAATTGAGTTCTTCT+GGG | - | chr1.2:83026732-83026751 | MS.gene065049:intron | 35.0% | |
GAGATTTCCAGTATATCTAC+AGG | - | chr1.2:83027346-83027365 | MS.gene065049:CDS | 35.0% | |
GTGATTTCTCAGTTGGAAAA+TGG | - | chr1.2:83026095-83026114 | MS.gene065049:CDS | 35.0% | |
TCTCTTGTATGCTTAGTTCA+AGG | - | chr1.2:83026560-83026579 | MS.gene065049:intron | 35.0% | |
TGAGAAAGGACTCAATACAT+GGG | - | chr1.2:83027070-83027089 | MS.gene065049:intron | 35.0% | |
TGTATTGAGTCCTTTCTCAT+AGG | + | chr1.2:83027069-83027088 | None:intergenic | 35.0% | |
TTCTTCAGTTCTACCAATAG+TGG | + | chr1.2:83026760-83026779 | None:intergenic | 35.0% | |
TTGAAGAGAATGCAAGGTAT+TGG | - | chr1.2:83026818-83026837 | MS.gene065049:intron | 35.0% | |
TTGCATTTGATTCAGCTCAT+TGG | - | chr1.2:83026857-83026876 | MS.gene065049:CDS | 35.0% | |
! | AAAGTGGGTGGATTTGAATT+TGG | - | chr1.2:83027094-83027113 | MS.gene065049:intron | 35.0% |
! | CATACTTCTAAAAACGACTC+GGG | + | chr1.2:83027132-83027151 | None:intergenic | 35.0% |
! | CCATACTTCTAAAAACGACT+CGG | + | chr1.2:83027133-83027152 | None:intergenic | 35.0% |
! | GCAGTAACTTGTCAAAAGAA+TGG | - | chr1.2:83026172-83026191 | MS.gene065049:CDS | 35.0% |
! | TTTGATGCACTGAAGTATCT+TGG | - | chr1.2:83026476-83026495 | MS.gene065049:intron | 35.0% |
AAATGGAAGTGGAAGCCATT+AGG | - | chr1.2:83026217-83026236 | MS.gene065049:intron | 40.0% | |
ACTCAATACATGGGCAAAGT+GGG | - | chr1.2:83027079-83027098 | MS.gene065049:intron | 40.0% | |
AGCATACAAGAGATTCCCAT+TGG | + | chr1.2:83026553-83026572 | None:intergenic | 40.0% | |
AGCATGGTTTACGTGTGTTT+GGG | + | chr1.2:83026424-83026443 | None:intergenic | 40.0% | |
AGGAAAAAGGTCACCTATGA+TGG | - | chr1.2:83026599-83026618 | MS.gene065049:CDS | 40.0% | |
AGGAAAGAGAATGATGTTGG+TGG | - | chr1.2:83026508-83026527 | MS.gene065049:intron | 40.0% | |
AGGTGGGATTATTACATGGA+AGG | - | chr1.2:83027008-83027027 | MS.gene065049:intron | 40.0% | |
AGTACGTACCTGTTATGTCT+AGG | + | chr1.2:83027158-83027177 | None:intergenic | 40.0% | |
AGTAGTAGTGCTAAAAGGAG+TGG | - | chr1.2:83027313-83027332 | MS.gene065049:CDS | 40.0% | |
ATGTCTTTCCATGCTATGGT+AGG | - | chr1.2:83026629-83026648 | MS.gene065049:CDS | 40.0% | |
CAAATGGTTGCCTATGAGAA+AGG | - | chr1.2:83027056-83027075 | MS.gene065049:intron | 40.0% | |
CATTTGATTCAGCTCATTGG+TGG | - | chr1.2:83026860-83026879 | MS.gene065049:CDS | 40.0% | |
GACAGTTGGAATCATAGAGA+GGG | + | chr1.2:83026138-83026157 | None:intergenic | 40.0% | |
GAGAGGAAAGAGAATGATGT+TGG | - | chr1.2:83026505-83026524 | MS.gene065049:intron | 40.0% | |
GGAAAGAGAATGATGTTGGT+GGG | - | chr1.2:83026509-83026528 | MS.gene065049:intron | 40.0% | |
TACCAGGTGGGATTATTACA+TGG | - | chr1.2:83027004-83027023 | MS.gene065049:intron | 40.0% | |
TATTCCAACCGACAGGAAAA+AGG | - | chr1.2:83026586-83026605 | MS.gene065049:CDS | 40.0% | |
TGCAAACCCAAAGAGATTCA+TGG | - | chr1.2:83026065-83026084 | MS.gene065049:CDS | 40.0% | |
TTCCATGTAATAATCCCACC+TGG | + | chr1.2:83027009-83027028 | None:intergenic | 40.0% | |
! | ACTCCTTTTAGCACTACTAC+TGG | + | chr1.2:83027314-83027333 | None:intergenic | 40.0% |
! | AGCTTCTCGATGACATTTTC+AGG | - | chr1.2:83026453-83026472 | MS.gene065049:intron | 40.0% |
! | ATAGGTGACCTTTTTCCTGT+CGG | + | chr1.2:83026597-83026616 | None:intergenic | 40.0% |
! | CTTTTGACAAGTTACTGCAG+TGG | + | chr1.2:83026170-83026189 | None:intergenic | 40.0% |
!! | GAGAATGCAAGGTATTGGAA+AGG | - | chr1.2:83026823-83026842 | MS.gene065049:intron | 40.0% |
!!! | CCGAGTCGTTTTTAGAAGTA+TGG | - | chr1.2:83027130-83027149 | MS.gene065049:intron | 40.0% |
AAGGAGTTATTCCAACCGAC+AGG | - | chr1.2:83026579-83026598 | MS.gene065049:CDS | 45.0% | |
CAGCATGGTTTACGTGTGTT+TGG | + | chr1.2:83026425-83026444 | None:intergenic | 45.0% | |
CTTGGGATGGAACAACCTAA+TGG | + | chr1.2:83026235-83026254 | None:intergenic | 45.0% | |
GAAGAAGAGAGGCAGAAACA+AGG | - | chr1.2:83027434-83027453 | MS.gene065049:CDS | 45.0% | |
GACTCAATACATGGGCAAAG+TGG | - | chr1.2:83027078-83027097 | MS.gene065049:intron | 45.0% | |
GAGAGGCAGAAACAAGGTAA+TGG | - | chr1.2:83027440-83027459 | MS.gene065049:CDS | 45.0% | |
GGACAGTTGGAATCATAGAG+AGG | + | chr1.2:83026139-83026158 | None:intergenic | 45.0% | |
GGACCAGTAGTAGTGCTAAA+AGG | - | chr1.2:83027308-83027327 | MS.gene065049:CDS | 45.0% | |
GTATGGCACCTAGACATAAC+AGG | - | chr1.2:83027147-83027166 | MS.gene065049:intron | 45.0% | |
GTTGGAATCATAGAGAGGGT+AGG | + | chr1.2:83026134-83026153 | None:intergenic | 45.0% | |
GTTTCATCATCACCTTGGGA+TGG | + | chr1.2:83026248-83026267 | None:intergenic | 45.0% | |
TCCAAATATCAGGCACACCA+GGG | + | chr1.2:83027496-83027515 | None:intergenic | 45.0% | |
TTCCAAATATCAGGCACACC+AGG | + | chr1.2:83027497-83027516 | None:intergenic | 45.0% | |
TTCTTCCAATGCAAGCCAAC+TGG | + | chr1.2:83026026-83026045 | None:intergenic | 45.0% | |
TTGTCAAAAGAATGGACGGC+CGG | - | chr1.2:83026180-83026199 | MS.gene065049:CDS | 45.0% | |
TTTAGCACTACTACTGGTCC+TGG | + | chr1.2:83027308-83027327 | None:intergenic | 45.0% | |
! | CATTAGGTTGTTCCATCCCA+AGG | - | chr1.2:83026233-83026252 | MS.gene065049:intron | 45.0% |
!! | AAAACGACTCGGGTTTTTCG+AGG | + | chr1.2:83027122-83027141 | None:intergenic | 45.0% |
AAATATCAGGCACACCAGGG+AGG | + | chr1.2:83027493-83027512 | None:intergenic | 50.0% | |
AATGGCTGCAATCAGAGGAC+TGG | + | chr1.2:83027466-83027485 | None:intergenic | 50.0% | |
AGTCCTCTGATTGCAGCCAT+TGG | - | chr1.2:83027465-83027484 | MS.gene065049:CDS | 50.0% | |
AGTGGCGAGATAAGGACAGT+TGG | + | chr1.2:83026152-83026171 | None:intergenic | 50.0% | |
CAATACATGGGCAAAGTGGG+TGG | - | chr1.2:83027082-83027101 | MS.gene065049:intron | 50.0% | |
GGAACGAAATGCTGAGTGCA+TGG | - | chr1.2:83027513-83027532 | MS.gene065049:CDS | 50.0% | |
GTTACTGCAGTGGCGAGATA+AGG | + | chr1.2:83026160-83026179 | None:intergenic | 50.0% | |
GTTCTTCTGGGCACCACTAT+TGG | - | chr1.2:83026744-83026763 | MS.gene065049:intron | 50.0% | |
TCCCTGGTGTGCCTGATATT+TGG | - | chr1.2:83027492-83027511 | MS.gene065049:CDS | 50.0% | |
TTCAGCCACATGCATGTTCC+AGG | - | chr1.2:83027287-83027306 | MS.gene065049:CDS | 50.0% | |
! | GTGACCTTTTTCCTGTCGGT+TGG | + | chr1.2:83026593-83026612 | None:intergenic | 50.0% |
!! | AGTGTCCAGTTGGCTTGCAT+TGG | - | chr1.2:83026018-83026037 | MS.gene065049:CDS | 50.0% |
!! | GCTCATTGGTGGACTCATTC+TGG | - | chr1.2:83026871-83026890 | MS.gene065049:CDS | 50.0% |
CTGGTCCTGGAACATGCATG+TGG | + | chr1.2:83027295-83027314 | None:intergenic | 55.0% | |
GCACCAATGGCTGCAATCAG+AGG | + | chr1.2:83027471-83027490 | None:intergenic | 55.0% | |
!! | ATCCAGCGGAAGTGTCCAGT+TGG | - | chr1.2:83026008-83026027 | MS.gene065049:CDS | 55.0% |
AGCCAACTGGACACTTCCGC+TGG | + | chr1.2:83026013-83026032 | None:intergenic | 60.0% | |
! | TGCAGCCATTGGTGCCTCCC+TGG | - | chr1.2:83027476-83027495 | MS.gene065049:CDS | 65.0% |
!! | GCACACCAGGGAGGCACCAA+TGG | + | chr1.2:83027484-83027503 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 83025932 | 83027541 | 83025932 | ID=MS.gene065049 |
chr1.2 | mRNA | 83025932 | 83027541 | 83025932 | ID=MS.gene065049.t1;Parent=MS.gene065049 |
chr1.2 | exon | 83027219 | 83027541 | 83027219 | ID=MS.gene065049.t1.exon1;Parent=MS.gene065049.t1 |
chr1.2 | CDS | 83027219 | 83027541 | 83027219 | ID=cds.MS.gene065049.t1;Parent=MS.gene065049.t1 |
chr1.2 | exon | 83026827 | 83026998 | 83026827 | ID=MS.gene065049.t1.exon2;Parent=MS.gene065049.t1 |
chr1.2 | CDS | 83026827 | 83026998 | 83026827 | ID=cds.MS.gene065049.t1;Parent=MS.gene065049.t1 |
chr1.2 | exon | 83026568 | 83026749 | 83026568 | ID=MS.gene065049.t1.exon3;Parent=MS.gene065049.t1 |
chr1.2 | CDS | 83026568 | 83026749 | 83026568 | ID=cds.MS.gene065049.t1;Parent=MS.gene065049.t1 |
chr1.2 | exon | 83026305 | 83026463 | 83026305 | ID=MS.gene065049.t1.exon4;Parent=MS.gene065049.t1 |
chr1.2 | CDS | 83026305 | 83026463 | 83026305 | ID=cds.MS.gene065049.t1;Parent=MS.gene065049.t1 |
chr1.2 | exon | 83025932 | 83026232 | 83025932 | ID=MS.gene065049.t1.exon5;Parent=MS.gene065049.t1 |
chr1.2 | CDS | 83025932 | 83026232 | 83025932 | ID=cds.MS.gene065049.t1;Parent=MS.gene065049.t1 |
Gene Sequence |
Protein sequence |