AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065148

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065148.t1 MTR_1g110510 98.239 284 5 0 1 284 1 284 0.0 585
MS.gene065148.t1 MTR_1g110510 97.826 230 5 0 1 230 1 230 1.02e-172 476
MS.gene065148.t1 MTR_5g056160 69.231 286 85 2 1 283 1 286 6.86e-146 411
MS.gene065148.t1 MTR_5g056140 68.531 286 87 2 1 283 1 286 1.38e-145 410
MS.gene065148.t1 MTR_4g090610 58.889 270 105 2 20 283 16 285 1.40e-112 327
MS.gene065148.t1 MTR_4g090610 58.889 270 105 2 20 283 60 329 2.30e-112 328
MS.gene065148.t1 MTR_4g090610 58.889 270 105 2 20 283 105 374 2.65e-112 329
MS.gene065148.t1 MTR_2g012440 45.583 283 142 5 7 283 15 291 5.11e-89 267
MS.gene065148.t1 MTR_4g090610 56.995 193 77 2 20 206 16 208 2.23e-74 228
MS.gene065148.t1 MTR_4g090610 56.995 193 77 2 20 206 60 252 4.64e-74 229
MS.gene065148.t1 MTR_2g012440 47.489 219 104 4 7 219 15 228 1.14e-69 215
MS.gene065148.t1 MTR_5g056560 63.077 130 48 0 124 253 30 159 1.88e-56 180
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065148.t1 AT1G68290 60.563 284 106 3 4 283 8 289 1.23e-130 372
MS.gene065148.t1 AT4G21585 53.237 278 121 3 15 283 13 290 1.57e-105 309
MS.gene065148.t1 AT4G21585 53.237 278 121 3 15 283 13 290 1.57e-105 309
MS.gene065148.t1 AT4G21585 48.684 304 121 4 15 283 13 316 1.38e-99 295
MS.gene065148.t1 AT4G21585 48.366 306 121 4 15 283 13 318 2.67e-99 294
MS.gene065148.t1 AT4G21590 50.355 282 126 4 11 283 9 285 3.87e-99 293
MS.gene065148.t1 AT4G21590 50.355 282 126 4 11 283 9 285 3.87e-99 293
MS.gene065148.t1 AT1G11190 49.259 270 130 4 20 283 25 293 4.21e-97 288
MS.gene065148.t1 AT4G21600 47.552 286 143 3 5 283 2 287 1.25e-96 286
MS.gene065148.t1 AT4G21585 44.980 249 102 4 15 228 13 261 1.39e-71 221
MS.gene065148.t1 AT4G21585 44.980 249 102 4 15 228 13 261 1.39e-71 221

Find 50 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTCAGCTTCTTGACTA+TGG 0.302298 1.2:-81846380 MS.gene065148:CDS
TGAATACATCAGTGCTATTC+AGG 0.326595 1.2:-81845605 MS.gene065148:CDS
CCTTCTAGTACAGAATCTTC+AGG 0.334513 1.2:+81845162 None:intergenic
AAGGGAACTTACTGTCATAT+TGG 0.351867 1.2:+81846637 None:intergenic
GAAATTTAATTGATGTTCAT+TGG 0.362937 1.2:-81845811 MS.gene065148:CDS
TGACTATTGGCAAACGTGAT+AGG 0.404381 1.2:+81845049 None:intergenic
ATATGCATATGAAGGTATTA+AGG 0.404985 1.2:-81845214 MS.gene065148:CDS
CCTGAAGATTCTGTACTAGA+AGG 0.411841 1.2:-81845162 MS.gene065148:intron
GCTAATCGCAAACTGACTAT+TGG 0.426971 1.2:+81845036 None:intergenic
GGGGATTGCAAGGATTTGAA+TGG 0.433220 1.2:-81846443 MS.gene065148:CDS
ACTTGTCAAGTGTGTGCTCA+TGG 0.461201 1.2:-81846737 MS.gene065148:CDS
CTGAGCTATCTTACAAGTAA+TGG 0.475088 1.2:+81847061 None:intergenic
GTATTAAGGCAGCATGTCAA+TGG 0.478931 1.2:-81845200 MS.gene065148:CDS
CTTCTAGTACAGAATCTTCA+GGG 0.485476 1.2:+81845163 None:intergenic
GTTTCAAAACATTCAAGGGT+GGG 0.486286 1.2:-81847099 MS.gene065148:CDS
TTTCAAAACATTCAAGGGTG+GGG 0.494907 1.2:-81847098 MS.gene065148:CDS
TAATTTGCAGCCTCTACATA+CGG 0.498462 1.2:-81845855 MS.gene065148:intron
TATTGGAAAGTGCAAAGCTT+AGG 0.504659 1.2:+81846654 None:intergenic
CTTGTCAAGTGTGTGCTCAT+GGG 0.509798 1.2:-81846736 MS.gene065148:CDS
CATCTCCCATAAAATGAGAA+AGG 0.511115 1.2:+81846203 None:intergenic
ACATGGTCGGATGAGGTAGC+AGG 0.512546 1.2:-81845413 MS.gene065148:CDS
GAGAAAGATAGATGTGTTGT+GGG 0.518130 1.2:-81846419 MS.gene065148:CDS
TGGAAAGTGCAAAGCTTAGG+AGG 0.520990 1.2:+81846657 None:intergenic
AGTAATGGGACATACATGTC+GGG 0.521034 1.2:+81845356 None:intergenic
GTCGGATGAGGTAGCAGGAT+GGG 0.528823 1.2:-81845408 MS.gene065148:CDS
TATTCGTTAAGGGGATTGCA+AGG 0.533466 1.2:-81846453 MS.gene065148:intron
TATTAAGGCAGCATGTCAAT+GGG 0.542486 1.2:-81845199 MS.gene065148:CDS
AGAGAAAGATAGATGTGTTG+TGG 0.544030 1.2:-81846420 MS.gene065148:CDS
ATTCAAGGGTGGGGAACTGA+TGG 0.544754 1.2:-81847089 MS.gene065148:CDS
AGCTGAAGGAGGAGTTCGAT+TGG 0.551609 1.2:-81845016 MS.gene065148:CDS
TTGATGTTCATTGGTTCACA+AGG 0.554509 1.2:-81845802 MS.gene065148:CDS
GTCAGTTTGCGATTAGCTGA+AGG 0.557320 1.2:-81845030 MS.gene065148:CDS
AATTTGCAGCCTCTACATAC+GGG 0.559058 1.2:-81845854 MS.gene065148:intron
ACAGAAAACATGGTCGGATG+AGG 0.559720 1.2:-81845420 MS.gene065148:intron
CATTACTTGTAAGATAGCTC+AGG 0.566463 1.2:-81847060 MS.gene065148:intron
GACATACATGTCGGGGCATG+TGG 0.567220 1.2:+81845364 None:intergenic
TGTTTCAAAACATTCAAGGG+TGG 0.581514 1.2:-81847100 MS.gene065148:CDS
GGAAAGTGCAAAGCTTAGGA+GGG 0.585750 1.2:+81846658 None:intergenic
TATGATACAGAAAACATGGT+CGG 0.617584 1.2:-81845426 MS.gene065148:intron
GTTGTAAAACCCGTATGTAG+AGG 0.618312 1.2:+81845845 None:intergenic
GGTCGGATGAGGTAGCAGGA+TGG 0.619767 1.2:-81845409 MS.gene065148:CDS
CCTCAGTGATACAGCTGCAG+CGG 0.623111 1.2:-81846796 MS.gene065148:CDS
AGTTTGCGATTAGCTGAAGG+AGG 0.637560 1.2:-81845027 MS.gene065148:CDS
GAAAGTGCAAAGCTTAGGAG+GGG 0.640450 1.2:+81846659 None:intergenic
TGCTATTCAGGAGAATATCA+CGG 0.650646 1.2:-81845593 MS.gene065148:intron
GGAAAAGAAGTGCTTGCGTG+AGG 0.665712 1.2:+81846224 None:intergenic
GCCATAGTCAAGAAGCTGAG+TGG 0.678325 1.2:+81846379 None:intergenic
TTCTAGTACAGAATCTTCAG+GGG 0.679325 1.2:+81845164 None:intergenic
GTAATGGGACATACATGTCG+GGG 0.721213 1.2:+81845357 None:intergenic
CCGCTGCAGCTGTATCACTG+AGG 0.729141 1.2:+81846796 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAAACATAAAAAATTT+AGG + chr1.2:81845817-81845836 None:intergenic 10.0%
!! ATAAAATTACTTAATTACTT+TGG - chr1.2:81846888-81846907 MS.gene065148:intron 10.0%
!! ATAGAATATATAATAAAACA+CGG + chr1.2:81845184-81845203 None:intergenic 10.0%
!! TAAAATTACTTAATTACTTT+GGG - chr1.2:81846889-81846908 MS.gene065148:intron 10.0%
!! TGTAGAAATAATTAGATTTA+GGG + chr1.2:81845121-81845140 None:intergenic 15.0%
!!! AATTTTATACAGATAAATGT+GGG + chr1.2:81846876-81846895 None:intergenic 15.0%
!!! ATTTATGTTTTATGATAAAG+TGG - chr1.2:81845587-81845606 MS.gene065148:intron 15.0%
!!! TAATTTTATACAGATAAATG+TGG + chr1.2:81846877-81846896 None:intergenic 15.0%
!! AAATTAACACAGCAAAAAAT+AGG + chr1.2:81846267-81846286 None:intergenic 20.0%
!! AAGATATAAACTTAAGAGTA+TGG + chr1.2:81846219-81846238 None:intergenic 20.0%
!! ACTTGTTTAAATATTCGTTA+AGG - chr1.2:81845672-81845691 MS.gene065148:intron 20.0%
!! ATTTCAAACTAAACTAGTAA+TGG + chr1.2:81846798-81846817 None:intergenic 20.0%
!! CTTGTTTAAATATTCGTTAA+GGG - chr1.2:81845673-81845692 MS.gene065148:intron 20.0%
!! GAAATTTAATTGATGTTCAT+TGG - chr1.2:81846325-81846344 MS.gene065148:intron 20.0%
!! GTGTAGAAATAATTAGATTT+AGG + chr1.2:81845122-81845141 None:intergenic 20.0%
!! TATATAATAAAACACGGATT+TGG + chr1.2:81845178-81845197 None:intergenic 20.0%
!! TTAACGAATATTTAAACAAG+TGG + chr1.2:81845673-81845692 None:intergenic 20.0%
!! TTGTTTAAATATTCGTTAAG+GGG - chr1.2:81845674-81845693 MS.gene065148:intron 20.0%
!! TTTCAAACTAAACTAGTAAT+GGG + chr1.2:81846797-81846816 None:intergenic 20.0%
!!! AATTTTGTAACATATAGGTT+TGG - chr1.2:81846455-81846474 MS.gene065148:intron 20.0%
!!! ACATAAAAAATTTAGGTTCA+TGG + chr1.2:81845810-81845829 None:intergenic 20.0%
!!! AGATATAAACTTAAGAGTAT+GGG + chr1.2:81846218-81846237 None:intergenic 20.0%
!!! ATTTTATACAGATAAATGTG+GGG + chr1.2:81846875-81846894 None:intergenic 20.0%
!!! ATTTTATGATACAGAAAACA+TGG - chr1.2:81846706-81846725 MS.gene065148:CDS 20.0%
!!! ATTTTGTAACATATAGGTTT+GGG - chr1.2:81846456-81846475 MS.gene065148:intron 20.0%
!!! GTGTCAAATTTTATCTTAAA+TGG - chr1.2:81845429-81845448 MS.gene065148:intron 20.0%
!!! TAGTTTGAAATTTGTTCTAT+TGG - chr1.2:81846807-81846826 MS.gene065148:intron 20.0%
!!! TGACTAATTTTGTAACATAT+AGG - chr1.2:81846450-81846469 MS.gene065148:intron 20.0%
!!! TTTTAAAGTCATTGAATTCT+AGG + chr1.2:81845551-81845570 None:intergenic 20.0%
!!! TTTTATTTATATCAGCTCTT+TGG - chr1.2:81845839-81845858 MS.gene065148:CDS 20.0%
!!! TTTTGTTTCAAAACATTCAA+GGG - chr1.2:81845033-81845052 MS.gene065148:CDS 20.0%
!!! TTTTTGTTTCAAAACATTCA+AGG - chr1.2:81845032-81845051 MS.gene065148:CDS 20.0%
! AAATAAATAATCTGCCTTGA+CGG + chr1.2:81845616-81845635 None:intergenic 25.0%
! AGAACTATGCAAAATGAAAA+GGG + chr1.2:81845520-81845539 None:intergenic 25.0%
! TACAAATTCTTGAATTCACA+CGG + chr1.2:81846167-81846186 None:intergenic 25.0%
! TAGAACTATGCAAAATGAAA+AGG + chr1.2:81845521-81845540 None:intergenic 25.0%
! TTCAAGAATTTGTAACTTCA+TGG - chr1.2:81846173-81846192 MS.gene065148:intron 25.0%
!! AACCAAATTCTTGTTTCTTA+TGG - chr1.2:81845868-81845887 MS.gene065148:intron 25.0%
!! ACCAAATTCTTGTTTCTTAT+GGG - chr1.2:81845869-81845888 MS.gene065148:intron 25.0%
!! ATATAAACTTAAGAGTATGG+GGG + chr1.2:81846216-81846235 None:intergenic 25.0%
!! CTTTTCCTTTCTCATTTTAT+GGG - chr1.2:81845928-81845947 MS.gene065148:intron 25.0%
!! GATATAAACTTAAGAGTATG+GGG + chr1.2:81846217-81846236 None:intergenic 25.0%
!! TATGTTTTATGATAAAGTGG+AGG - chr1.2:81845590-81845609 MS.gene065148:intron 25.0%
!! TCTTTTCCTTTCTCATTTTA+TGG - chr1.2:81845927-81845946 MS.gene065148:intron 25.0%
!! TTTTATACAGATAAATGTGG+GGG + chr1.2:81846874-81846893 None:intergenic 25.0%
!!! ATATGCATATGAAGGTATTA+AGG - chr1.2:81846922-81846941 MS.gene065148:intron 25.0%
CAAAAACATGAATGAGACTA+TGG + chr1.2:81845018-81845037 None:intergenic 30.0%
CGAAAAATGTTGAGAAATAG+AGG + chr1.2:81846644-81846663 None:intergenic 30.0%
GATTCATGATGTTGAGAATT+GGG + chr1.2:81846387-81846406 None:intergenic 30.0%
GTTTCATGATACAGTTAGAA+AGG + chr1.2:81847045-81847064 None:intergenic 30.0%
TATGATACAGAAAACATGGT+CGG - chr1.2:81846710-81846729 MS.gene065148:CDS 30.0%
TCACTGAAAAATACGATTGA+GGG + chr1.2:81847152-81847171 None:intergenic 30.0%
TGATTCATGATGTTGAGAAT+TGG + chr1.2:81846388-81846407 None:intergenic 30.0%
TTATTGTTAGACATACCTGA+TGG + chr1.2:81845960-81845979 None:intergenic 30.0%
TTTAGGGAGAGAAAAATGAT+TGG + chr1.2:81845105-81845124 None:intergenic 30.0%
! AAAAATTTAGGTTCATGGCA+AGG + chr1.2:81845805-81845824 None:intergenic 30.0%
! AAAATTTAGGTTCATGGCAA+GGG + chr1.2:81845804-81845823 None:intergenic 30.0%
! CCAAATTCTTGTTTCTTATG+GGG - chr1.2:81845870-81845889 MS.gene065148:intron 30.0%
! CTTTTCAGATATGCATATGA+AGG - chr1.2:81846914-81846933 MS.gene065148:intron 30.0%
!! AAGTCATTTTGTGCATAATC+TGG + chr1.2:81845383-81845402 None:intergenic 30.0%
!! ATAAGGACAATGTTGATTTC+AGG - chr1.2:81846076-81846095 MS.gene065148:intron 30.0%
AAAATCCTGTGCAAGATTGA+AGG + chr1.2:81846673-81846692 None:intergenic 35.0%
AAGGGAACTTACTGTCATAT+TGG + chr1.2:81845502-81845521 None:intergenic 35.0%
AGAGAAAGATAGATGTGTTG+TGG - chr1.2:81845716-81845735 MS.gene065148:intron 35.0%
AGCTCAGAATCTCCAAAAAT+CGG - chr1.2:81845989-81846008 MS.gene065148:intron 35.0%
ATAGGAAGTAATCATCTGCA+GGG + chr1.2:81847072-81847091 None:intergenic 35.0%
CATCTCCCATAAAATGAGAA+AGG + chr1.2:81845936-81845955 None:intergenic 35.0%
CATTACTTGTAAGATAGCTC+AGG - chr1.2:81845076-81845095 MS.gene065148:intron 35.0%
CCCCATAAGAAACAAGAATT+TGG + chr1.2:81845873-81845892 None:intergenic 35.0%
CTGAGCTATCTTACAAGTAA+TGG + chr1.2:81845078-81845097 None:intergenic 35.0%
CTTCTAGTACAGAATCTTCA+GGG + chr1.2:81846976-81846995 None:intergenic 35.0%
GAGAAAGATAGATGTGTTGT+GGG - chr1.2:81845717-81845736 MS.gene065148:intron 35.0%
GAGACTGCACACAATAAAAA+AGG + chr1.2:81845319-81845338 None:intergenic 35.0%
GTTTCAAAACATTCAAGGGT+GGG - chr1.2:81845037-81845056 MS.gene065148:CDS 35.0%
TATTAAGGCAGCATGTCAAT+GGG - chr1.2:81846937-81846956 MS.gene065148:intron 35.0%
TGCTATTCAGGAGAATATCA+CGG - chr1.2:81846543-81846562 MS.gene065148:intron 35.0%
TGTTTCAAAACATTCAAGGG+TGG - chr1.2:81845036-81845055 MS.gene065148:CDS 35.0%
TTCTAGTACAGAATCTTCAG+GGG + chr1.2:81846975-81846994 None:intergenic 35.0%
TTTCAAAACATTCAAGGGTG+GGG - chr1.2:81845038-81845057 MS.gene065148:CDS 35.0%
! TAATTTGCAGCCTCTACATA+CGG - chr1.2:81846281-81846300 MS.gene065148:intron 35.0%
! TAGTAATGGGACATACATGT+CGG + chr1.2:81846784-81846803 None:intergenic 35.0%
! TATTGGAAAGTGCAAAGCTT+AGG + chr1.2:81845485-81845504 None:intergenic 35.0%
! TGAATACATCAGTGCTATTC+AGG - chr1.2:81846531-81846550 MS.gene065148:intron 35.0%
!! TTGATGTTCATTGGTTCACA+AGG - chr1.2:81846334-81846353 MS.gene065148:intron 35.0%
AAACACGGACTTGAATTCTC+TGG - chr1.2:81845221-81845240 MS.gene065148:intron 40.0%
AAGCTGCAGAACAATACAAC+AGG + chr1.2:81845144-81845163 None:intergenic 40.0%
AATTTGCAGCCTCTACATAC+GGG - chr1.2:81846282-81846301 MS.gene065148:intron 40.0%
ACATTCCTTCAATCTTGCAC+AGG - chr1.2:81846665-81846684 MS.gene065148:CDS 40.0%
CCTGAAGATTCTGTACTAGA+AGG - chr1.2:81846974-81846993 MS.gene065148:intron 40.0%
CCTTCTAGTACAGAATCTTC+AGG + chr1.2:81846977-81846996 None:intergenic 40.0%
GAGACTGTTGGATCAAGATA+AGG - chr1.2:81846059-81846078 MS.gene065148:intron 40.0%
GATAGGAAGTAATCATCTGC+AGG + chr1.2:81847073-81847092 None:intergenic 40.0%
GCTAATCGCAAACTGACTAT+TGG + chr1.2:81847103-81847122 None:intergenic 40.0%
GTATTAAGGCAGCATGTCAA+TGG - chr1.2:81846936-81846955 MS.gene065148:intron 40.0%
GTTGTAAAACCCGTATGTAG+AGG + chr1.2:81846294-81846313 None:intergenic 40.0%
TATTCGTTAAGGGGATTGCA+AGG - chr1.2:81845683-81845702 MS.gene065148:intron 40.0%
TCCAAAAATCGGATTCCCAA+CGG - chr1.2:81846000-81846019 MS.gene065148:intron 40.0%
TGACTATTGGCAAACGTGAT+AGG + chr1.2:81847090-81847109 None:intergenic 40.0%
! ACGGGTTTTACAACAGACAA+GGG - chr1.2:81846300-81846319 MS.gene065148:intron 40.0%
! AGTAATGGGACATACATGTC+GGG + chr1.2:81846783-81846802 None:intergenic 40.0%
! TACGGGTTTTACAACAGACA+AGG - chr1.2:81846299-81846318 MS.gene065148:intron 40.0%
! TTTTATGGGAGATGTCCATC+AGG - chr1.2:81845942-81845961 MS.gene065148:intron 40.0%
ACAGAAAACATGGTCGGATG+AGG - chr1.2:81846716-81846735 MS.gene065148:CDS 45.0%
ACCACTCAGCTTCTTGACTA+TGG - chr1.2:81845756-81845775 MS.gene065148:intron 45.0%
ACTTGTCAAGTGTGTGCTCA+TGG - chr1.2:81845399-81845418 MS.gene065148:CDS 45.0%
CCACATCAGTGCAGATTTCA+AGG + chr1.2:81846141-81846160 None:intergenic 45.0%
CTTGTCAAGTGTGTGCTCAT+GGG - chr1.2:81845400-81845419 MS.gene065148:CDS 45.0%
GGGGATTGCAAGGATTTGAA+TGG - chr1.2:81845693-81845712 MS.gene065148:intron 45.0%
! ACCGTTGGGAATCCGATTTT+TGG + chr1.2:81846004-81846023 None:intergenic 45.0%
! AGTTTGCGATTAGCTGAAGG+AGG - chr1.2:81847109-81847128 MS.gene065148:CDS 45.0%
! CCTTGAAATCTGCACTGATG+TGG - chr1.2:81846138-81846157 MS.gene065148:intron 45.0%
! GAAAGTGCAAAGCTTAGGAG+GGG + chr1.2:81845480-81845499 None:intergenic 45.0%
! GGAAAGTGCAAAGCTTAGGA+GGG + chr1.2:81845481-81845500 None:intergenic 45.0%
! GGTTTTACAACAGACAAGGG+AGG - chr1.2:81846303-81846322 MS.gene065148:intron 45.0%
! GTAATGGGACATACATGTCG+GGG + chr1.2:81846782-81846801 None:intergenic 45.0%
! GTCAGTTTGCGATTAGCTGA+AGG - chr1.2:81847106-81847125 MS.gene065148:CDS 45.0%
! TGGAAAGTGCAAAGCTTAGG+AGG + chr1.2:81845482-81845501 None:intergenic 45.0%
!! TCTCTGGAGTTGCAGTAGTA+CGG - chr1.2:81845237-81845256 MS.gene065148:intron 45.0%
!!! GTGGGTTTTTTGCAACCGTT+GGG + chr1.2:81846018-81846037 None:intergenic 45.0%
!!! TGTGGGTTTTTTGCAACCGT+TGG + chr1.2:81846019-81846038 None:intergenic 45.0%
!! AAAAAATATATAATAAAACA+CGG - chr1.2:81845206-81845225 MS.gene065148:CDS 5.0%
AATTGGGCTCACTCACATGG+TGG + chr1.2:81846371-81846390 None:intergenic 50.0%
ACATTCATGCAGTCTCCACG+TGG - chr1.2:81846036-81846055 MS.gene065148:intron 50.0%
ACGTGGAGACTGCATGAATG+TGG + chr1.2:81846037-81846056 None:intergenic 50.0%
AGCTGAAGGAGGAGTTCGAT+TGG - chr1.2:81847120-81847139 MS.gene065148:CDS 50.0%
ATTCAAGGGTGGGGAACTGA+TGG - chr1.2:81845047-81845066 MS.gene065148:CDS 50.0%
CATTCATGCAGTCTCCACGT+GGG - chr1.2:81846037-81846056 MS.gene065148:intron 50.0%
CGTGGAGACTGCATGAATGT+GGG + chr1.2:81846036-81846055 None:intergenic 50.0%
GAGAATTGGGCTCACTCACA+TGG + chr1.2:81846374-81846393 None:intergenic 50.0%
GCCATAGTCAAGAAGCTGAG+TGG + chr1.2:81845760-81845779 None:intergenic 50.0%
TGATAAAGTGGAGGCCGTCA+AGG - chr1.2:81845599-81845618 MS.gene065148:CDS 50.0%
!! GGAAAAGAAGTGCTTGCGTG+AGG + chr1.2:81845915-81845934 None:intergenic 50.0%
ACATGGTCGGATGAGGTAGC+AGG - chr1.2:81846723-81846742 MS.gene065148:CDS 55.0%
CCTCAGTGATACAGCTGCAG+CGG - chr1.2:81845340-81845359 MS.gene065148:intron 55.0%
GACATACATGTCGGGGCATG+TGG + chr1.2:81846775-81846794 None:intergenic 55.0%
GTCGGATGAGGTAGCAGGAT+GGG - chr1.2:81846728-81846747 MS.gene065148:CDS 55.0%
TGATCCAACAGTCTCCCACG+TGG + chr1.2:81846054-81846073 None:intergenic 55.0%
CCGCTGCAGCTGTATCACTG+AGG + chr1.2:81845343-81845362 None:intergenic 60.0%
GGTCGGATGAGGTAGCAGGA+TGG - chr1.2:81846727-81846746 MS.gene065148:CDS 60.0%
GTCTCCACGTGGGAGACTGT+TGG - chr1.2:81846047-81846066 MS.gene065148:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 81844987 81847171 81844987 ID=MS.gene065148
chr1.2 mRNA 81844987 81847171 81844987 ID=MS.gene065148.t1;Parent=MS.gene065148
chr1.2 exon 81847061 81847171 81847061 ID=MS.gene065148.t1.exon1;Parent=MS.gene065148.t1
chr1.2 CDS 81847061 81847171 81847061 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81846649 81846823 81846649 ID=MS.gene065148.t1.exon2;Parent=MS.gene065148.t1
chr1.2 CDS 81846649 81846823 81846649 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81846366 81846464 81846366 ID=MS.gene065148.t1.exon3;Parent=MS.gene065148.t1
chr1.2 CDS 81846366 81846464 81846366 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81846195 81846250 81846195 ID=MS.gene065148.t1.exon4;Parent=MS.gene065148.t1
chr1.2 CDS 81846195 81846250 81846195 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81845784 81845867 81845784 ID=MS.gene065148.t1.exon5;Parent=MS.gene065148.t1
chr1.2 CDS 81845784 81845867 81845784 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81845594 81845686 81845594 ID=MS.gene065148.t1.exon6;Parent=MS.gene065148.t1
chr1.2 CDS 81845594 81845686 81845594 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81845371 81845438 81845371 ID=MS.gene065148.t1.exon7;Parent=MS.gene065148.t1
chr1.2 CDS 81845371 81845438 81845371 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81845163 81845236 81845163 ID=MS.gene065148.t1.exon8;Parent=MS.gene065148.t1
chr1.2 CDS 81845163 81845236 81845163 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
chr1.2 exon 81844987 81845081 81844987 ID=MS.gene065148.t1.exon9;Parent=MS.gene065148.t1
chr1.2 CDS 81844987 81845081 81844987 ID=cds.MS.gene065148.t1;Parent=MS.gene065148.t1
Gene Sequence

>MS.gene065148

ATGGAGCATCACAAAATCATTTTAGTGACCATAGTCTCATTCATGTTTTTGTTTCAAAACATTCAAGGGTGGGGAACTGATGGACATGCCATTACTTGTAAGATAGCTCAGGTAACCAATCATTTTTCTCTCCCTAAATCTAATTATTTCTACACCTGTTGTATTGTTCTGCAGCTTCATCAGAGAATCCAAATCCGTGTTTTATTATATATTCTATCAAAAAAATATATAATAAAACACGGACTTGAATTCTCTGGAGTTGCAGTAGTACGGTACTATATACGTTGTATATTATTATATGCATGTAACAAGTACTATCACATTAATTTCCTTTTTTATTGTGTGCAGTCTCGCCTCAGTGATACAGCTGCAGCGGCTGTGAAAAAATTGCTGCCAGATTATGCACAAAATGACTTGTCAAGTGTGTGCTCATGGGCTGATCGTGTCAAATTTTATCTTAAATGGTCTTCTGCTTTACACTTTGCTGATACCCCTCCTAAGCTTTGCACTTTCCAATATGACAGTAAGTTCCCTTTTCATTTTGCATAGTTCTAATGAAAACCTAGAATTCAATGACTTTAAAAGTGAAAGATGTGATTTATTTATGTTTTATGATAAAGTGGAGGCCGTCAAGGCAGATTATTTATTTATCTTGACTAACGTGAAATGTAGTACTGCACTTACCACTTGTTTAAATATTCGTTAAGGGGATTGCAAGGATTTGAATGGAGAGAAAGATAGATGTGTTGTGGGAGCGATTAACAATTACACCACTCAGCTTCTTGACTATGGCAAAGACACTAAATGTAAAAAACCCTTGCCATGAACCTAAATTTTTTATGTTTACATTTATTTTATTTATATCAGCTCTTTGGTTGACTAACCAAATTCTTGTTTCTTATGGGGAAATCACAATATCAGATAACCTCACGCAAGCACTTCTTTTCCTTTCTCATTTTATGGGAGATGTCCATCAGGTATGTCTAACAATAACAATTACAAAGCTCAGAATCTCCAAAAATCGGATTCCCAACGGTTGCAAAAAACCCACATTCATGCAGTCTCCACGTGGGAGACTGTTGGATCAAGATAAGGACAATGTTGATTTCAGGCAGATTTTTTATATTTGATTTAAAAAACTAAAATCTCGACCTTGAAATCTGCACTGATGTGGTGACCGTGTGAATTCAAGAATTTGTAACTTCATGGAATCTCTCGATTCTGATCCCCCATACTCTTAAGTTTATATCTTAATTTGCAATTTAGTTATCATAATGCCTATTTTTTGCTGTGTTAATTTGCAGCCTCTACATACGGGTTTTACAACAGACAAGGGAGGAAATTTAATTGATGTTCATTGGTTCACAAGGAAACAAAATCTCCACCATGTGAGTGAGCCCAATTCTCAACATCATGAATCATCAAGCTACTTACAATGTGATCTATTTCACTATCTACAACACTGACTAATTTTGTAACATATAGGTTTGGGATGCTAACATAATTGAGACAGCAGAAGAAAGATTCTATGACACTAACATAGATGAATACATCAGTGCTATTCAGGAGAATATCACGGTATACAATGCAGCAGCTTTCTGTTATCTATTTTAAATAAAAGTCTTTTGCTAATGACATGTGACGAAATTTTACACCTCTATTTCTCAACATTTTTCGCACATTCCTTCAATCTTGCACAGGATTTTTACTAATACTCAAATTTTATGATACAGAAAACATGGTCGGATGAGGTAGCAGGATGGGAAGCTTGCAGTTCTAATAAGACCACATGCCCCGACATGTATGTCCCATTACTAGTTTAGTTTGAAATTTGTTCTATTGGCAATAACAATTAATTTGTGTTCAAAACTCTAGCTAGAAAATCCCCCACATTTATCTGTATAAAATTACTTAATTACTTTGGGTACTTTTCAGATATGCATATGAAGGTATTAAGGCAGCATGTCAATGGGCATATAAAGATGCCCCTGAAGATTCTGTACTAGAAGGTAAGCTATAATAATTTTGCACGTAGAGTTCTTTCATTTACATTTTCCTTTCTAACTGTATCATGAAACAATACCCTGCAGATGATTACTTCCTATCACGTTTGCCAATAGTCAGTTTGCGATTAGCTGAAGGAGGAGTTCGATTGGCAGCAACCCTCAATCGTATTTTTCAGTGA
Protein sequence

>MS.gene065148.t1

MEHHKIILVTIVSFMFLFQNIQGWGTDGHAITCKIAQSRLSDTAAAAVKKLLPDYAQNDLSSVCSWADRVKFYLKWSSALHFADTPPKLCTFQYDRDCKDLNGEKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVHQPLHTGFTTDKGGNLIDVHWFTRKQNLHHVWDANIIETAEERFYDTNIDEYISAIQENITKTWSDEVAGWEACSSNKTTCPDIYAYEGIKAACQWAYKDAPEDSVLEDDYFLSRLPIVSLRLAEGGVRLAATLNRIFQ