AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065168


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065168.t1 MTR_2g080010 97.740 354 8 0 1 354 1 354 0.0 723
MS.gene065168.t1 MTR_4g089135 53.581 377 116 14 1 352 1 343 1.04e-111 329
MS.gene065168.t1 MTR_7g085220 55.212 259 86 6 9 250 2 247 7.42e-92 278
MS.gene065168.t1 MTR_2157s0010 68.132 182 50 4 13 191 6 182 1.98e-85 259
MS.gene065168.t1 MTR_7g100990 63.128 179 59 1 15 193 11 182 1.17e-81 252
MS.gene065168.t1 MTR_3g088110 70.482 166 38 2 14 179 6 160 5.40e-81 249
MS.gene065168.t1 MTR_2g093810 48.413 252 85 5 15 228 14 258 1.86e-80 248
MS.gene065168.t1 MTR_5g041940 66.272 169 46 3 15 182 3 161 1.69e-79 244
MS.gene065168.t1 MTR_4g081870 60.000 190 59 4 1 190 1 173 4.39e-78 241
MS.gene065168.t1 MTR_2g079990 64.162 173 49 2 12 184 13 172 2.36e-76 239
MS.gene065168.t1 MTR_8g094580 67.683 164 39 3 15 176 7 158 4.98e-75 233
MS.gene065168.t1 MTR_8g059170 64.740 173 50 3 12 184 11 172 4.68e-74 232
MS.gene065168.t1 MTR_3g096920 67.284 162 42 3 15 176 7 157 1.77e-73 229
MS.gene065168.t1 MTR_2g079990 57.868 197 50 3 12 184 13 200 3.01e-73 232
MS.gene065168.t1 MTR_3g096920 56.545 191 51 4 15 176 7 194 9.86e-67 213
MS.gene065168.t1 MTR_6g011860 53.614 166 74 3 14 179 14 176 9.86e-61 200
MS.gene065168.t1 MTR_5g040420 52.381 168 67 2 17 179 16 175 2.29e-60 199
MS.gene065168.t1 MTR_8g467490 53.086 162 74 1 17 178 16 175 4.01e-60 198
MS.gene065168.t1 MTR_6g084430 53.488 172 65 3 12 183 2 158 8.58e-59 193
MS.gene065168.t1 MTR_4g108760 41.176 272 134 9 3 266 5 258 2.10e-58 193
MS.gene065168.t1 MTR_7g005280 54.545 176 64 3 1 176 1 160 4.79e-58 189
MS.gene065168.t1 MTR_2g064090 50.820 183 74 5 14 194 5 173 8.84e-58 191
MS.gene065168.t1 MTR_3g109340 50.000 172 69 2 8 177 15 171 7.89e-57 189
MS.gene065168.t1 MTR_3g109340 49.711 173 69 2 8 177 15 172 1.13e-56 188
MS.gene065168.t1 MTR_2g062730 41.441 222 112 4 9 227 4 210 1.29e-56 188
MS.gene065168.t1 MTR_2g078700 54.217 166 67 2 14 179 22 178 1.49e-55 186
MS.gene065168.t1 MTR_6g012670 37.722 281 131 9 11 280 16 263 1.59e-55 184
MS.gene065168.t1 MTR_1g008740 50.877 171 65 3 11 177 9 164 3.62e-55 184
MS.gene065168.t1 MTR_1g008740 50.877 171 65 3 11 177 23 178 3.98e-55 184
MS.gene065168.t1 MTR_6g477900 48.889 180 77 3 15 192 6 172 1.89e-54 179
MS.gene065168.t1 MTR_3g064580 53.892 167 63 3 15 179 6 160 4.19e-54 189
MS.gene065168.t1 MTR_5g076850 54.491 167 61 4 15 179 6 159 1.02e-53 187
MS.gene065168.t1 MTR_3g435150 52.410 166 68 3 12 177 13 167 1.05e-53 179
MS.gene065168.t1 MTR_4g134460 50.299 167 69 2 17 183 56 208 3.59e-53 181
MS.gene065168.t1 MTR_4g035590 46.561 189 76 5 15 195 8 179 5.70e-53 179
MS.gene065168.t1 MTR_7g085260 49.714 175 77 4 11 183 13 178 9.02e-53 179
MS.gene065168.t1 MTR_6g032770 40.239 251 127 7 14 250 17 258 1.22e-52 178
MS.gene065168.t1 MTR_1g069805 41.667 228 111 5 15 241 10 216 1.31e-52 175
MS.gene065168.t1 MTR_3g070030 47.368 171 80 2 11 181 15 175 4.30e-52 176
MS.gene065168.t1 MTR_5g012080 38.267 277 128 9 14 279 6 250 5.91e-52 176
MS.gene065168.t1 MTR_5g090970 45.198 177 92 3 17 191 20 193 1.29e-51 174
MS.gene065168.t1 MTR_5g021710 47.399 173 73 4 10 179 3 160 2.23e-51 174
MS.gene065168.t1 MTR_4g036030 45.361 194 79 6 14 195 6 184 3.87e-51 174
MS.gene065168.t1 MTR_8g024480 45.882 170 85 3 12 178 12 177 7.94e-51 175
MS.gene065168.t1 MTR_8g076110 47.619 168 70 4 15 179 6 158 2.26e-50 171
MS.gene065168.t1 MTR_5g014300 49.412 170 65 5 14 176 5 160 3.09e-50 171
MS.gene065168.t1 MTR_5g090970 45.198 177 91 4 17 191 20 192 3.92e-50 170
MS.gene065168.t1 MTR_7g097090 50.000 160 65 2 15 174 10 154 8.20e-50 169
MS.gene065168.t1 MTR_4g101680 47.059 170 70 4 14 179 6 159 1.03e-49 171
MS.gene065168.t1 MTR_3g116070 52.121 165 72 4 2 163 11 171 5.24e-49 168
MS.gene065168.t1 MTR_2g068880 47.305 167 77 4 17 176 24 186 1.52e-48 166
MS.gene065168.t1 MTR_2g068920 46.552 174 84 4 17 184 23 193 3.95e-48 164
MS.gene065168.t1 MTR_8g099750 48.256 172 78 4 15 186 14 174 4.32e-48 162
MS.gene065168.t1 MTR_4g098630 48.193 166 72 4 14 176 5 159 4.64e-48 165
MS.gene065168.t1 MTR_2g064470 48.485 165 71 4 12 176 8 158 5.86e-48 164
MS.gene065168.t1 MTR_7g011130 46.286 175 88 3 11 181 15 187 9.67e-48 165
MS.gene065168.t1 MTR_4g075980 42.132 197 91 5 5 197 6 183 3.06e-47 162
MS.gene065168.t1 MTR_1g096430 46.784 171 72 5 15 181 7 162 4.40e-47 163
MS.gene065168.t1 MTR_8g094580 66.087 115 25 3 64 176 2 104 4.12e-46 157
MS.gene065168.t1 MTR_7g011120 45.614 171 85 3 11 179 4 168 1.04e-45 158
MS.gene065168.t1 MTR_1g090720 44.221 199 96 4 14 204 41 232 1.21e-45 162
MS.gene065168.t1 MTR_3g098810 51.149 174 71 6 15 185 14 176 1.30e-45 156
MS.gene065168.t1 MTR_5g069030 47.590 166 72 3 15 178 25 177 1.54e-44 162
MS.gene065168.t1 MTR_3g096140 44.512 164 76 5 15 176 7 157 1.63e-43 152
MS.gene065168.t1 MTR_1g097300 48.980 147 71 2 2 146 6 150 3.49e-43 157
MS.gene065168.t1 MTR_2g086880 48.366 153 72 5 17 167 20 167 5.22e-43 156
MS.gene065168.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 5.63e-43 152
MS.gene065168.t1 MTR_1g090723 40.909 198 94 5 17 204 10 194 6.56e-43 157
MS.gene065168.t1 MTR_2g086880 45.000 160 67 3 17 175 20 159 7.15e-43 157
MS.gene065168.t1 MTR_3g096140 45.062 162 74 5 17 176 9 157 1.37e-42 151
MS.gene065168.t1 MTR_3g093050 45.181 166 76 3 15 178 22 174 1.39e-42 156
MS.gene065168.t1 MTR_3g093050 45.181 166 76 3 15 178 22 174 1.45e-42 156
MS.gene065168.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 1.54e-42 153
MS.gene065168.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 2.06e-42 153
MS.gene065168.t1 MTR_3g098810 57.252 131 52 2 15 143 14 142 3.65e-42 145
MS.gene065168.t1 MTR_1g090723 40.909 198 93 6 17 204 10 193 1.05e-41 154
MS.gene065168.t1 MTR_1g090723 40.909 198 93 6 17 204 10 193 1.35e-41 154
MS.gene065168.t1 MTR_0036s0150 33.117 308 168 12 17 304 7 296 2.43e-41 152
MS.gene065168.t1 MTR_8g023840 46.626 163 67 4 14 173 10 155 3.76e-41 149
MS.gene065168.t1 MTR_3g093040 42.515 167 81 3 14 178 107 260 5.04e-41 146
MS.gene065168.t1 MTR_8g093580 41.146 192 93 6 13 197 4 182 8.90e-40 147
MS.gene065168.t1 MTR_4g094302 41.718 163 82 2 15 177 11 160 1.53e-38 136
MS.gene065168.t1 MTR_3g070040 42.945 163 81 3 19 181 12 162 2.67e-38 139
MS.gene065168.t1 MTR_8g023900 35.019 257 148 9 13 251 186 441 1.47e-36 137
MS.gene065168.t1 MTR_8g023900 39.766 171 75 5 15 177 12 162 3.22e-32 125
MS.gene065168.t1 MTR_4g094302 47.656 128 59 1 15 142 11 130 2.74e-36 129
MS.gene065168.t1 MTR_8g023930 40.314 191 87 5 15 202 24 190 3.88e-36 137
MS.gene065168.t1 MTR_4g052620 40.838 191 87 8 15 192 5 182 4.61e-34 126
MS.gene065168.t1 MTR_8g023860 39.877 163 78 4 14 173 11 156 5.09e-34 130
MS.gene065168.t1 MTR_3g096140 40.940 149 73 5 30 176 1 136 8.06e-33 125
MS.gene065168.t1 MTR_2g086690 39.674 184 84 8 16 185 5 175 1.86e-30 116
MS.gene065168.t1 MTR_7g105170 37.143 175 97 5 14 182 3 170 2.92e-30 116
MS.gene065168.t1 MTR_8g093790 40.123 162 64 5 15 176 10 138 1.63e-28 109
MS.gene065168.t1 MTR_8g023880 34.101 217 102 8 14 212 6 199 5.75e-28 110
MS.gene065168.t1 MTR_3g096400 36.585 164 91 6 15 175 7 160 4.98e-25 101
MS.gene065168.t1 MTR_7g070140 54.321 81 37 0 68 148 17 97 1.04e-24 98.2
MS.gene065168.t1 MTR_7g083360 33.088 136 85 4 7 140 2 133 2.48e-19 84.0
MS.gene065168.t1 MTR_7g083370 32.394 142 88 5 7 145 2 138 4.38e-19 83.2
MS.gene065168.t1 MTR_7g083330 34.375 128 78 4 15 140 18 141 5.43e-17 78.6
MS.gene065168.t1 MTR_7g070150 38.462 91 39 3 106 196 1 74 1.75e-12 63.2
MS.gene065168.t1 MTR_7g116460 29.651 172 95 7 21 182 11 166 1.85e-12 66.2
MS.gene065168.t1 MTR_8g069160 29.012 162 96 5 1 146 54 212 2.39e-12 66.6
MS.gene065168.t1 MTR_1g087190 56.250 48 18 2 17 62 7 53 2.47e-12 61.6
MS.gene065168.t1 MTR_4g088245 29.012 162 96 5 1 146 54 212 2.59e-12 67.4
MS.gene065168.t1 MTR_1g093680 33.544 158 80 9 5 143 47 198 1.24e-11 65.9
MS.gene065168.t1 MTR_8g102240 31.613 155 80 7 15 146 47 198 1.59e-11 65.9
MS.gene065168.t1 MTR_8g102240 31.613 155 80 7 15 146 47 198 1.59e-11 65.9
MS.gene065168.t1 MTR_4g078875 32.895 152 80 7 13 146 46 193 2.18e-11 64.3
MS.gene065168.t1 MTR_2g090735 29.560 159 92 6 1 142 34 189 6.96e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065168.t1 AT3G15510 53.083 373 144 9 1 353 1 362 5.68e-118 346
MS.gene065168.t1 AT1G61110 73.333 195 48 3 5 196 6 199 3.28e-100 299
MS.gene065168.t1 AT1G52880 50.135 371 115 12 1 353 1 319 2.97e-95 286
MS.gene065168.t1 AT3G04070 65.574 183 48 3 15 182 10 192 5.67e-84 259
MS.gene065168.t1 AT3G04070 67.442 172 49 2 14 182 9 176 4.89e-82 253
MS.gene065168.t1 AT1G69490 60.714 196 60 4 1 196 1 179 2.83e-81 249
MS.gene065168.t1 AT1G01720 47.039 304 122 8 14 306 6 281 1.68e-79 245
MS.gene065168.t1 AT1G77450 53.061 245 84 7 14 242 9 238 8.82e-79 242
MS.gene065168.t1 AT5G63790 66.867 166 46 2 14 179 49 205 1.52e-75 236
MS.gene065168.t1 AT5G63790 66.867 166 46 2 14 179 59 215 1.59e-75 236
MS.gene065168.t1 AT5G08790 66.867 166 46 3 14 179 6 162 1.83e-75 234
MS.gene065168.t1 AT1G52890 62.500 184 53 4 1 184 3 170 2.00e-75 236
MS.gene065168.t1 AT3G15500 65.476 168 45 3 12 179 11 165 4.06e-74 232
MS.gene065168.t1 AT4G27410 60.109 183 56 4 12 190 11 180 5.97e-74 231
MS.gene065168.t1 AT4G27410 55.000 200 56 5 12 190 11 197 7.78e-70 221
MS.gene065168.t1 AT5G39820 51.744 172 73 2 17 178 22 193 2.54e-60 197
MS.gene065168.t1 AT5G13180 58.642 162 52 2 15 176 14 160 6.64e-59 191
MS.gene065168.t1 AT3G18400 53.614 166 63 3 12 177 2 153 1.11e-58 192
MS.gene065168.t1 AT1G76420 53.988 163 63 2 15 177 22 172 2.85e-58 192
MS.gene065168.t1 AT1G26870 51.515 165 78 1 15 179 16 178 2.58e-57 192
MS.gene065168.t1 AT5G39610 53.012 166 67 3 11 176 16 170 8.82e-57 186
MS.gene065168.t1 AT5G18270 45.413 218 96 6 9 213 15 222 1.26e-56 187
MS.gene065168.t1 AT2G24430 52.353 170 63 2 11 177 12 166 2.15e-56 186
MS.gene065168.t1 AT2G24430 52.353 170 63 2 11 177 12 166 2.15e-56 186
MS.gene065168.t1 AT5G61430 53.892 167 66 3 11 177 12 167 2.16e-56 187
MS.gene065168.t1 AT5G07680 53.846 169 63 4 11 177 13 168 5.00e-56 186
MS.gene065168.t1 AT5G18270 44.954 218 97 6 9 213 15 222 5.50e-56 186
MS.gene065168.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.69e-55 186
MS.gene065168.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.69e-55 186
MS.gene065168.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.69e-55 186
MS.gene065168.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.69e-55 186
MS.gene065168.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.69e-55 186
MS.gene065168.t1 AT5G07680 54.217 166 61 4 14 177 2 154 2.08e-55 184
MS.gene065168.t1 AT3G04060 48.259 201 86 6 14 206 19 209 2.14e-55 184
MS.gene065168.t1 AT3G03200 50.000 176 74 3 15 188 6 169 3.52e-55 188
MS.gene065168.t1 AT3G29035 60.150 133 51 1 10 142 19 149 4.72e-55 183
MS.gene065168.t1 AT2G33480 50.543 184 67 5 1 180 1 164 2.94e-54 179
MS.gene065168.t1 AT5G53950 50.000 170 76 1 9 178 11 171 5.49e-54 182
MS.gene065168.t1 AT3G17730 51.412 177 70 6 15 189 6 168 6.54e-54 178
MS.gene065168.t1 AT3G15170 51.515 165 71 2 15 179 20 175 1.93e-53 179
MS.gene065168.t1 AT2G33480 50.543 184 69 6 1 180 1 166 1.94e-53 177
MS.gene065168.t1 AT5G17260 48.315 178 78 3 14 189 5 170 2.67e-53 182
MS.gene065168.t1 AT1G65910 51.515 165 65 5 15 177 6 157 4.34e-53 185
MS.gene065168.t1 AT2G02450 48.503 167 72 2 17 183 53 205 3.82e-52 177
MS.gene065168.t1 AT2G02450 48.503 167 72 2 17 183 53 205 4.24e-52 178
MS.gene065168.t1 AT3G12977 45.810 179 82 4 1 176 1 167 4.56e-52 174
MS.gene065168.t1 AT1G33280 48.824 170 68 4 15 181 8 161 7.94e-52 174
MS.gene065168.t1 AT4G36160 47.486 179 71 5 1 176 5 163 1.02e-51 176
MS.gene065168.t1 AT4G36160 47.486 179 71 5 1 176 1 159 1.05e-51 176
MS.gene065168.t1 AT4G36160 47.486 179 71 5 1 176 1 159 1.05e-51 176
MS.gene065168.t1 AT2G43000 45.833 168 79 2 17 184 20 175 2.01e-51 172
MS.gene065168.t1 AT4G10350 49.405 168 67 4 15 178 9 162 2.65e-51 174
MS.gene065168.t1 AT2G18060 47.929 169 70 4 14 179 8 161 3.57e-51 174
MS.gene065168.t1 AT2G18060 47.929 169 70 4 14 179 8 161 3.57e-51 174
MS.gene065168.t1 AT2G46770 43.316 187 99 3 1 182 2 186 3.77e-51 174
MS.gene065168.t1 AT1G56010 37.943 282 147 8 2 266 6 276 3.80e-51 173
MS.gene065168.t1 AT1G62700 42.786 201 88 5 14 202 6 191 9.64e-51 174
MS.gene065168.t1 AT1G62700 42.786 201 88 5 14 202 6 191 9.64e-51 174
MS.gene065168.t1 AT5G62380 49.704 169 67 4 14 179 6 159 1.41e-50 172
MS.gene065168.t1 AT5G62380 49.704 169 67 4 14 179 6 159 1.41e-50 172
MS.gene065168.t1 AT5G46590 49.390 164 70 4 15 176 6 158 3.57e-50 169
MS.gene065168.t1 AT1G71930 43.575 179 83 3 12 187 6 169 6.50e-50 170
MS.gene065168.t1 AT1G71930 43.575 179 83 3 12 187 6 169 6.50e-50 170
MS.gene065168.t1 AT3G10480 47.486 179 79 3 3 179 15 180 6.63e-50 173
MS.gene065168.t1 AT1G12260 46.988 166 70 4 14 176 6 156 6.70e-50 170
MS.gene065168.t1 AT5G46590 55.639 133 56 2 15 145 6 137 6.76e-50 169
MS.gene065168.t1 AT1G12260 46.988 166 70 4 14 176 6 156 7.88e-50 172
MS.gene065168.t1 AT5G66300 47.337 169 72 3 14 179 11 165 9.21e-50 169
MS.gene065168.t1 AT3G10480 47.486 179 80 3 3 179 15 181 1.52e-49 172
MS.gene065168.t1 AT4G17980 48.171 164 74 2 15 176 6 160 1.61e-49 167
MS.gene065168.t1 AT4G17980 48.171 164 74 2 15 176 6 160 1.98e-49 167
MS.gene065168.t1 AT3G10490 42.857 210 99 5 3 205 15 210 1.09e-48 164
MS.gene065168.t1 AT1G32770 43.931 173 91 3 12 181 13 182 1.19e-48 167
MS.gene065168.t1 AT3G61910 42.135 178 96 3 12 184 8 183 1.63e-48 166
MS.gene065168.t1 AT3G10500 48.810 168 71 4 14 179 8 162 5.96e-48 170
MS.gene065168.t1 AT1G54330 49.697 165 65 4 14 176 5 153 1.87e-47 163
MS.gene065168.t1 AT4G28530 47.191 178 63 3 15 176 10 172 2.41e-47 164
MS.gene065168.t1 AT5G04410 48.810 168 71 4 14 179 8 162 3.24e-47 168
MS.gene065168.t1 AT1G32510 47.126 174 72 5 15 180 6 167 4.29e-47 161
MS.gene065168.t1 AT1G33060 46.286 175 79 3 15 187 24 185 5.27e-47 169
MS.gene065168.t1 AT1G33060 46.286 175 79 3 15 187 24 185 5.94e-47 169
MS.gene065168.t1 AT3G10490 45.810 179 83 3 3 179 15 181 8.46e-47 165
MS.gene065168.t1 AT2G17040 45.122 164 73 3 17 179 8 155 1.01e-45 157
MS.gene065168.t1 AT3G10480 37.849 251 102 6 3 211 15 253 3.78e-45 162
MS.gene065168.t1 AT1G34180 47.853 163 70 4 17 177 18 167 5.20e-45 160
MS.gene065168.t1 AT1G34180 47.853 163 70 4 17 177 18 167 3.59e-44 160
MS.gene065168.t1 AT5G24590 43.407 182 89 4 14 193 12 181 5.60e-44 157
MS.gene065168.t1 AT1G34190 46.626 163 72 4 17 177 18 167 6.16e-44 159
MS.gene065168.t1 AT3G12910 46.369 179 87 5 17 189 23 198 6.36e-44 154
MS.gene065168.t1 AT4G35580 47.273 165 72 3 14 176 8 159 1.36e-43 158
MS.gene065168.t1 AT4G35580 47.273 165 72 3 14 176 8 159 1.37e-43 158
MS.gene065168.t1 AT4G35580 47.273 165 72 3 14 176 8 159 1.60e-43 157
MS.gene065168.t1 AT3G49530 43.636 165 79 3 14 176 12 164 2.38e-43 155
MS.gene065168.t1 AT3G49530 43.636 165 79 3 14 176 12 164 3.85e-43 155
MS.gene065168.t1 AT1G34180 44.571 175 70 4 17 177 18 179 9.02e-43 154
MS.gene065168.t1 AT5G64060 46.061 165 74 4 14 176 5 156 1.51e-42 151
MS.gene065168.t1 AT1G34180 44.571 175 70 4 17 177 18 179 5.83e-42 154
MS.gene065168.t1 AT5G09330 46.341 164 73 3 15 176 6 156 7.48e-42 152
MS.gene065168.t1 AT5G09330 46.341 164 73 3 15 176 6 156 7.48e-42 152
MS.gene065168.t1 AT5G09330 46.341 164 73 3 15 176 6 156 7.48e-42 152
MS.gene065168.t1 AT5G09330 46.341 164 73 3 15 176 6 156 7.48e-42 152
MS.gene065168.t1 AT5G09330 46.341 164 73 3 15 176 6 156 7.48e-42 152
MS.gene065168.t1 AT2G27300 41.436 181 85 4 15 194 14 174 1.48e-41 148
MS.gene065168.t1 AT1G32870 49.701 167 69 5 15 179 10 163 4.58e-39 145
MS.gene065168.t1 AT1G32870 49.701 167 69 5 15 179 10 163 5.14e-39 145
MS.gene065168.t1 AT1G32870 49.701 167 69 5 15 179 46 199 9.33e-39 145
MS.gene065168.t1 AT3G44290 39.412 170 82 4 17 185 16 165 2.85e-38 137
MS.gene065168.t1 AT5G64530 42.169 166 81 3 14 176 2 155 3.52e-38 135
MS.gene065168.t1 AT3G44290 39.412 170 82 4 17 185 16 165 9.55e-38 138
MS.gene065168.t1 AT5G22290 36.702 188 92 6 3 183 9 176 1.27e-37 138
MS.gene065168.t1 AT5G64530 48.092 131 56 2 14 144 2 120 1.57e-36 130
MS.gene065168.t1 AT5G04395 40.764 157 79 2 3 145 16 172 4.29e-36 129
MS.gene065168.t1 AT1G56010 36.986 219 111 7 64 266 2 209 4.40e-32 121
MS.gene065168.t1 AT5G61430 51.754 114 44 3 64 177 2 104 6.98e-32 121
MS.gene065168.t1 AT3G12977 47.788 113 47 3 64 176 14 114 1.17e-30 116
MS.gene065168.t1 AT4G10350 49.107 112 42 3 68 178 18 115 1.01e-29 115
MS.gene065168.t1 AT3G04420 43.411 129 67 3 16 140 4 130 4.28e-29 114
MS.gene065168.t1 AT3G44350 37.500 176 90 6 14 182 4 166 6.36e-29 112
MS.gene065168.t1 AT2G33480 50.427 117 39 5 68 180 8 109 8.70e-29 111
MS.gene065168.t1 AT3G04420 43.411 129 67 3 16 140 4 130 1.01e-28 114
MS.gene065168.t1 AT4G28530 45.312 128 54 1 15 126 10 137 2.79e-28 112
MS.gene065168.t1 AT5G22380 36.842 171 92 5 18 182 8 168 8.28e-28 109
MS.gene065168.t1 AT1G02230 41.007 139 74 4 16 149 4 139 1.51e-27 111
MS.gene065168.t1 AT4G01550 34.356 163 87 5 18 176 7 153 1.62e-26 110
MS.gene065168.t1 AT3G44350 40.288 139 73 4 14 145 4 139 2.11e-26 103
MS.gene065168.t1 AT1G02250 29.740 269 156 9 16 274 4 249 6.03e-25 104
MS.gene065168.t1 AT4G01520 39.850 133 75 4 16 143 5 137 2.09e-23 99.0
MS.gene065168.t1 AT4G01540 40.458 131 73 4 18 143 7 137 7.15e-23 99.4
MS.gene065168.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.17e-22 98.2
MS.gene065168.t1 AT1G02220 39.535 129 69 4 16 140 4 127 1.19e-22 98.2
MS.gene065168.t1 AT5G14000 37.879 132 76 3 14 143 14 141 1.25e-22 93.2
MS.gene065168.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.31e-22 99.0
MS.gene065168.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.64e-22 98.2
MS.gene065168.t1 AT5G14000 37.879 132 76 3 14 143 14 141 3.19e-22 93.6
MS.gene065168.t1 AT2G43000 42.593 108 50 2 77 184 2 97 4.10e-22 92.8
MS.gene065168.t1 AT1G01010 38.806 134 68 5 18 140 6 136 5.35e-20 90.9
MS.gene065168.t1 AT5G50820 36.029 136 75 5 14 146 16 142 1.41e-17 80.5
MS.gene065168.t1 AT3G56530 32.164 171 98 5 7 174 44 199 3.37e-17 81.6
MS.gene065168.t1 AT3G10490 41.304 92 42 2 88 179 2 81 1.66e-16 80.1
MS.gene065168.t1 AT3G10490 41.304 92 42 2 88 179 2 81 1.66e-16 80.1
MS.gene065168.t1 AT2G18060 43.678 87 34 3 93 179 2 73 1.27e-15 76.6
MS.gene065168.t1 AT3G55210 32.184 174 87 7 15 174 11 167 5.25e-15 74.7
MS.gene065168.t1 AT5G56620 33.333 159 76 6 15 146 43 198 1.46e-14 74.7
MS.gene065168.t1 AT5G56620 33.333 159 76 6 15 146 43 198 1.91e-14 74.3
MS.gene065168.t1 AT5G56620 33.333 159 76 6 15 146 43 198 2.96e-14 73.6
MS.gene065168.t1 AT5G14490 27.338 278 138 14 13 256 56 303 3.44e-13 70.1
MS.gene065168.t1 AT5G14490 27.338 278 138 14 13 256 53 300 3.92e-13 70.1
MS.gene065168.t1 AT1G28470 31.757 148 80 7 13 143 75 218 5.56e-13 69.3
MS.gene065168.t1 AT5G14490 27.338 278 138 14 13 256 56 303 6.78e-13 69.3
MS.gene065168.t1 AT1G25580 33.333 144 77 6 13 143 56 193 1.68e-12 68.6
MS.gene065168.t1 AT4G29230 32.051 156 79 7 15 146 48 200 4.01e-12 67.8
MS.gene065168.t1 AT4G29230 32.051 156 79 7 15 146 47 199 4.27e-12 67.4
MS.gene065168.t1 AT5G14490 32.450 151 76 7 13 143 53 197 5.74e-12 65.9
MS.gene065168.t1 AT3G04430 34.586 133 73 5 21 141 6 136 6.43e-12 64.3
MS.gene065168.t1 AT4G29230 32.051 156 79 7 15 146 48 200 8.75e-12 66.2
MS.gene065168.t1 AT4G28500 33.108 148 79 6 13 143 57 201 4.08e-11 63.5

Find 87 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCTCTTCTCTTTATAAT+TGG 0.137711 2.4:-17723320 MS.gene065168:CDS
TCATTCCTTCTAGTAAATTT+TGG 0.211863 2.4:+17723448 None:intergenic
GGGCTGCAACTTCTGGTTAT+TGG 0.227988 2.4:-17724058 MS.gene065168:CDS
ATGAATAACAACAATAATTT+AGG 0.242375 2.4:-17723423 MS.gene065168:CDS
AAGAGAAGAGAGTGTTCTTT+TGG 0.244314 2.4:+17723329 None:intergenic
ATCTAACAAAAGATTTAGTT+TGG 0.274253 2.4:-17723259 MS.gene065168:CDS
TTCATCCCTTGAATTTGATA+TGG 0.291612 2.4:+17723117 None:intergenic
CCAAACAGGGCTGCAACTTC+TGG 0.303061 2.4:-17724065 MS.gene065168:CDS
ATCAAATTCAAGGGATGAAT+TGG 0.314410 2.4:-17723113 MS.gene065168:CDS
CAACCAGGAGGCCTATTATT+AGG 0.329457 2.4:+17723885 None:intergenic
TGTATTTGTAGCTTGATGAT+TGG 0.357396 2.4:-17723665 MS.gene065168:intron
CGAAATCCAGGCGGGAGATT+CGG 0.368393 2.4:+17724561 None:intergenic
TAACTACAGCAATGCATTGT+TGG 0.373294 2.4:-17723478 MS.gene065168:CDS
CGAATGGAGCTAGGCCAAAC+AGG 0.379899 2.4:-17724079 MS.gene065168:CDS
CTGATAATAAGCCTAATAAT+AGG 0.380441 2.4:-17723896 MS.gene065168:CDS
CCAGAAGTTGCAGCCCTGTT+TGG 0.389855 2.4:+17724065 None:intergenic
TTGCGAACCGGTTGATGAAT+CGG 0.391663 2.4:+17724587 None:intergenic
ACCTTGAAGCAGCACTCATT+TGG 0.405462 2.4:+17723529 None:intergenic
TTCGGATACTTCCTGTCCCT+TGG 0.410697 2.4:+17724098 None:intergenic
TTTGTAGCTAAGGCAACGTT+TGG 0.415412 2.4:-17724146 MS.gene065168:intron
GTATTTGTAGCTTGATGATT+GGG 0.422988 2.4:-17723664 MS.gene065168:intron
TTTGAAGATGTTGTCATAGT+TGG 0.426553 2.4:+17723366 None:intergenic
AATGACCAAAATTTACTAGA+AGG 0.431439 2.4:-17723453 MS.gene065168:CDS
ATCTCTACAAATTTGATCCA+TGG 0.432194 2.4:-17724446 MS.gene065168:CDS
GCCAAATGAGTGCTGCTTCA+AGG 0.436617 2.4:-17723530 MS.gene065168:CDS
GAGATTCGGTTGTTGCGAAC+CGG 0.438287 2.4:+17724575 None:intergenic
TCTTCCCTTTCATGTTCCAC+TGG 0.440701 2.4:+17723600 None:intergenic
ATTTGGCCCACGTTGATTGA+TGG 0.453048 2.4:+17723546 None:intergenic
TCTGGTTATTGGAAGGCAAC+TGG 0.454372 2.4:-17724047 MS.gene065168:CDS
GATTCAATGGATGATATGAT+TGG 0.456909 2.4:-17723579 MS.gene065168:CDS
CAAGAGGTATCAAAACCAAT+TGG 0.457331 2.4:-17723941 MS.gene065168:CDS
AGTTGGTGTGAAGAAAGCTT+TGG 0.457762 2.4:-17723985 MS.gene065168:CDS
CTGTTTGGCCTAGCTCCATT+CGG 0.458288 2.4:+17724080 None:intergenic
ATACTCATGCATGATCCAAT+TGG 0.459236 2.4:+17723926 None:intergenic
ATTGATCCCAACATTGTTTG+TGG 0.459341 2.4:+17723141 None:intergenic
TCAATACCATATCAAATTCA+AGG 0.461436 2.4:-17723123 MS.gene065168:CDS
GAGATCAACTTCAGCTATGA+TGG 0.464880 2.4:+17724464 None:intergenic
TGATGAATCGGTACTTTCCA+TGG 0.469351 2.4:+17724599 None:intergenic
ACATGAAAGGGAAGATTCAA+TGG 0.471236 2.4:-17723592 MS.gene065168:CDS
GTCCCACCAGAAGTTAAAAC+AGG 0.472832 2.4:+17724014 None:intergenic
CATCAACCACAAACAATGTT+GGG 0.481234 2.4:-17723147 MS.gene065168:CDS
GCTATGATGGCTACTGGTAA+AGG 0.482914 2.4:+17724477 None:intergenic
GAAAGTACCGATTCATCAAC+CGG 0.485973 2.4:-17724594 MS.gene065168:CDS
ATTGGATCATGCATGAGTAT+AGG 0.491072 2.4:-17723923 MS.gene065168:CDS
AAGCCTAATAATAGGCCTCC+TGG 0.492045 2.4:-17723888 MS.gene065168:CDS
TAGGCCTCCTGGTTGTGACT+TGG 0.494714 2.4:-17723877 MS.gene065168:CDS
AGGCCTCCTGGTTGTGACTT+GGG 0.495640 2.4:-17723876 MS.gene065168:CDS
GAAGTACCTGGTAGCTCCCA+TGG 0.496644 2.4:+17724429 None:intergenic
TTTAGGAGGTTCAAATTCAA+AGG 0.504830 2.4:-17723406 MS.gene065168:CDS
GCATCAACCACAAACAATGT+TGG 0.505479 2.4:-17723148 MS.gene065168:CDS
TCTCTACAAATTTGATCCAT+GGG 0.518291 2.4:-17724445 MS.gene065168:CDS
ATTTCTTTAGTCCAAGGGAC+AGG 0.525984 2.4:-17724109 MS.gene065168:CDS
AATAACAACAATAATTTAGG+AGG 0.528493 2.4:-17723420 MS.gene065168:CDS
TTGATGATTGGGTGTTGTGC+CGG 0.533907 2.4:-17723653 MS.gene065168:CDS
GCGAGGAATGATCATGAGAA+TGG 0.540506 2.4:-17723228 MS.gene065168:CDS
ACAACAAGCTCTTCATCTGT+AGG 0.541287 2.4:+17724531 None:intergenic
GGTCACCAGTGGAACATGAA+AGG 0.542950 2.4:-17723605 MS.gene065168:CDS
CAACAACCGAATCTCCCGCC+TGG 0.542994 2.4:-17724567 MS.gene065168:CDS
GTAGGGTGAAATCGAAATCC+AGG 0.546036 2.4:+17724549 None:intergenic
ACTTCAGCTATGATGGCTAC+TGG 0.548165 2.4:+17724471 None:intergenic
GATGCAATGAAGATGTTTGA+GGG 0.551640 2.4:+17723166 None:intergenic
ATTCAAGGGATGAATTGGTA+TGG 0.551889 2.4:-17723108 MS.gene065168:CDS
GTGGTATTTCTTTAGTCCAA+GGG 0.552045 2.4:-17724114 MS.gene065168:CDS
GGAAGTATCCGAATGGAGCT+AGG 0.553614 2.4:-17724088 MS.gene065168:CDS
GTCACCAGTGGAACATGAAA+GGG 0.556917 2.4:-17723604 MS.gene065168:CDS
TGCAACTTCTGGTTATTGGA+AGG 0.559634 2.4:-17724054 MS.gene065168:CDS
AGTGGTATTTCTTTAGTCCA+AGG 0.560338 2.4:-17724115 MS.gene065168:CDS
TGATGCAATGAAGATGTTTG+AGG 0.562392 2.4:+17723165 None:intergenic
CAACAAGCTCTTCATCTGTA+GGG 0.567380 2.4:+17724532 None:intergenic
TTGTTACCCAAGTCACAACC+AGG 0.578434 2.4:+17723870 None:intergenic
ACAAGAAAAGCAACACACAT+AGG 0.587318 2.4:-17723626 MS.gene065168:CDS
CAATACCATATCAAATTCAA+GGG 0.587495 2.4:-17723122 MS.gene065168:CDS
CAACGTTTGGAGAGCAAGAG+TGG 0.588251 2.4:-17724133 MS.gene065168:CDS
TTTGATCCATGGGAGCTACC+AGG 0.590967 2.4:-17724435 MS.gene065168:intron
GGTGAAATCGAAATCCAGGC+GGG 0.604212 2.4:+17724553 None:intergenic
TGGCCCACGTTGATTGATGG+TGG 0.637936 2.4:+17723549 None:intergenic
GAATGGAGCTAGGCCAAACA+GGG 0.639627 2.4:-17724078 MS.gene065168:CDS
TCAATGGATGATATGATTGG+AGG 0.647708 2.4:-17723576 MS.gene065168:CDS
GAAGATGTTGCAGCTCATGT+TGG 0.658061 2.4:-17723291 MS.gene065168:CDS
AGGGACAGGAAGTATCCGAA+TGG 0.658693 2.4:-17724095 MS.gene065168:CDS
CAACACACATAGGTCACCAG+TGG 0.671269 2.4:-17723616 MS.gene065168:CDS
TTAGTTTGGAAAATGTTGCG+AGG 0.674152 2.4:-17723245 MS.gene065168:CDS
GGGTGAAATCGAAATCCAGG+CGG 0.724293 2.4:+17724552 None:intergenic
TATGGTGGGAAACCACCAAG+AGG 0.726989 2.4:-17723957 MS.gene065168:CDS
TGTACCACCATCAATCAACG+TGG 0.742087 2.4:-17723553 MS.gene065168:CDS
TTACCCAAGTCACAACCAGG+AGG 0.745086 2.4:+17723873 None:intergenic
GTACCACCATCAATCAACGT+GGG 0.746935 2.4:-17723552 MS.gene065168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACAAGTTTTTTTTTTTT+GGG - chr2.4:17723518-17723537 MS.gene065168:CDS 10.0%
!! ATGAATAACAACAATAATTT+AGG - chr2.4:17724278-17724297 MS.gene065168:intron 15.0%
!!! GATTACAAGTTTTTTTTTTT+TGG - chr2.4:17723517-17723536 MS.gene065168:CDS 15.0%
!! AATAACAACAATAATTTAGG+AGG - chr2.4:17724281-17724300 MS.gene065168:intron 20.0%
!! ATCTAACAAAAGATTTAGTT+TGG - chr2.4:17724442-17724461 MS.gene065168:CDS 20.0%
!! GTTTGAAAATATGTAATCTT+TGG + chr2.4:17723297-17723316 None:intergenic 20.0%
! AATGACCAAAATTTACTAGA+AGG - chr2.4:17724248-17724267 MS.gene065168:intron 25.0%
! ATTTGTCTATCTATCTATTC+TGG - chr2.4:17723367-17723386 MS.gene065168:CDS 25.0%
! CAATACCATATCAAATTCAA+GGG - chr2.4:17724579-17724598 MS.gene065168:CDS 25.0%
! CTGATAATAAGCCTAATAAT+AGG - chr2.4:17723805-17723824 MS.gene065168:intron 25.0%
! TAACAAGAAAAACTCTCTAA+GGG - chr2.4:17723848-17723867 MS.gene065168:intron 25.0%
! TCAATACCATATCAAATTCA+AGG - chr2.4:17724578-17724597 MS.gene065168:CDS 25.0%
! TGTGATAAAAAAAGAGAGTT+TGG + chr2.4:17723888-17723907 None:intergenic 25.0%
! TTAGCTACAAAAAACCAAAA+GGG + chr2.4:17723546-17723565 None:intergenic 25.0%
! TTTGTCTATCTATCTATTCT+GGG - chr2.4:17723368-17723387 MS.gene065168:CDS 25.0%
!! CAAGGTTTCATAATTTTTCA+AGG - chr2.4:17724189-17724208 MS.gene065168:intron 25.0%
!! TCATTCCTTCTAGTAAATTT+TGG + chr2.4:17724256-17724275 None:intergenic 25.0%
ATCAAATTCAAGGGATGAAT+TGG - chr2.4:17724588-17724607 MS.gene065168:CDS 30.0%
ATCTCTACAAATTTGATCCA+TGG - chr2.4:17723255-17723274 MS.gene065168:CDS 30.0%
CACTCTCTTCTCTTTATAAT+TGG - chr2.4:17724381-17724400 MS.gene065168:intron 30.0%
CTTAGCTACAAAAAACCAAA+AGG + chr2.4:17723547-17723566 None:intergenic 30.0%
GATTCAATGGATGATATGAT+TGG - chr2.4:17724122-17724141 MS.gene065168:CDS 30.0%
GTAACAAGAAAAACTCTCTA+AGG - chr2.4:17723847-17723866 MS.gene065168:intron 30.0%
TCTCTACAAATTTGATCCAT+GGG - chr2.4:17723256-17723275 MS.gene065168:CDS 30.0%
TTCATCCCTTGAATTTGATA+TGG + chr2.4:17724587-17724606 None:intergenic 30.0%
TTTAGGAGGTTCAAATTCAA+AGG - chr2.4:17724295-17724314 MS.gene065168:intron 30.0%
TTTGAAGATGTTGTCATAGT+TGG + chr2.4:17724338-17724357 None:intergenic 30.0%
! GTATTTGTAGCTTGATGATT+GGG - chr2.4:17724037-17724056 MS.gene065168:CDS 30.0%
! TGTATTTGTAGCTTGATGAT+TGG - chr2.4:17724036-17724055 MS.gene065168:CDS 30.0%
!!! AAGAAAGCTTTGGTTTTCTA+TGG - chr2.4:17723726-17723745 MS.gene065168:intron 30.0%
!!! CTTTTGGTTTTTTGTAGCTA+AGG - chr2.4:17723545-17723564 MS.gene065168:CDS 30.0%
!!! TTCGATCATTTTTTCTTGCA+CGG - chr2.4:17723438-17723457 MS.gene065168:CDS 30.0%
ACAAGAAAAGCAACACACAT+AGG - chr2.4:17724075-17724094 MS.gene065168:CDS 35.0%
ACATGAAAGGGAAGATTCAA+TGG - chr2.4:17724109-17724128 MS.gene065168:CDS 35.0%
AGTGGTATTTCTTTAGTCCA+AGG - chr2.4:17723586-17723605 MS.gene065168:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG + chr2.4:17723778-17723797 None:intergenic 35.0%
ATTCAAGGGATGAATTGGTA+TGG - chr2.4:17724593-17724612 MS.gene065168:CDS 35.0%
ATTGATCCCAACATTGTTTG+TGG + chr2.4:17724563-17724582 None:intergenic 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr2.4:17723778-17723797 MS.gene065168:intron 35.0%
CATCAACCACAAACAATGTT+GGG - chr2.4:17724554-17724573 MS.gene065168:CDS 35.0%
GATGCAATGAAGATGTTTGA+GGG + chr2.4:17724538-17724557 None:intergenic 35.0%
GTGGTATTTCTTTAGTCCAA+GGG - chr2.4:17723587-17723606 MS.gene065168:CDS 35.0%
TAACTACAGCAATGCATTGT+TGG - chr2.4:17724223-17724242 MS.gene065168:intron 35.0%
TCAATGGATGATATGATTGG+AGG - chr2.4:17724125-17724144 MS.gene065168:CDS 35.0%
TGATGCAATGAAGATGTTTG+AGG + chr2.4:17724539-17724558 None:intergenic 35.0%
! TTAGTTTGGAAAATGTTGCG+AGG - chr2.4:17724456-17724475 MS.gene065168:CDS 35.0%
!! ATGTAATCTTTGGAAGTACC+TGG + chr2.4:17723287-17723306 None:intergenic 35.0%
!! CAAGAGGTATCAAAACCAAT+TGG - chr2.4:17723760-17723779 MS.gene065168:intron 35.0%
!!! AAAGCTTTGGTTTTCTATGG+TGG - chr2.4:17723729-17723748 MS.gene065168:intron 35.0%
!!! AAGAGAAGAGAGTGTTCTTT+TGG + chr2.4:17724375-17724394 None:intergenic 35.0%
!!! AAGCTTTGGTTTTCTATGGT+GGG - chr2.4:17723730-17723749 MS.gene065168:intron 35.0%
!!! CAATTGGTTTTGATACCTCT+TGG + chr2.4:17723762-17723781 None:intergenic 35.0%
!!! GATAAGCCTGTTTTAACTTC+TGG - chr2.4:17723681-17723700 MS.gene065168:intron 35.0%
!!! TCGATCATTTTTTCTTGCAC+GGG - chr2.4:17723439-17723458 MS.gene065168:CDS 35.0%
!!! TGTTGCTTTTCTTGTAGATC+CGG + chr2.4:17724070-17724089 None:intergenic 35.0%
!!! TTTTTTTTTGGGCACCCTTT+TGG - chr2.4:17723529-17723548 MS.gene065168:CDS 35.0%
ACAACAAGCTCTTCATCTGT+AGG + chr2.4:17723173-17723192 None:intergenic 40.0%
ATTTCTTTAGTCCAAGGGAC+AGG - chr2.4:17723592-17723611 MS.gene065168:CDS 40.0%
CAACAAGCTCTTCATCTGTA+GGG + chr2.4:17723172-17723191 None:intergenic 40.0%
GAGATCAACTTCAGCTATGA+TGG + chr2.4:17723240-17723259 None:intergenic 40.0%
GCATCAACCACAAACAATGT+TGG - chr2.4:17724553-17724572 MS.gene065168:CDS 40.0%
TTTGTAGCTAAGGCAACGTT+TGG - chr2.4:17723555-17723574 MS.gene065168:CDS 40.0%
! AGTTGGTGTGAAGAAAGCTT+TGG - chr2.4:17723716-17723735 MS.gene065168:intron 40.0%
! TGCAACTTCTGGTTATTGGA+AGG - chr2.4:17723647-17723666 MS.gene065168:CDS 40.0%
!! GAAAGTACCGATTCATCAAC+CGG - chr2.4:17723107-17723126 MS.gene065168:CDS 40.0%
!!! AAGCCTGTTTTAACTTCTGG+TGG - chr2.4:17723684-17723703 MS.gene065168:intron 40.0%
!!! AGCCTGTTTTAACTTCTGGT+GGG - chr2.4:17723685-17723704 MS.gene065168:intron 40.0%
!!! CTGAAGCTGCTTTTTTCTTG+AGG + chr2.4:17723202-17723221 None:intergenic 40.0%
!!! GAAGAGAGTGTTCTTTTGGA+AGG + chr2.4:17724371-17724390 None:intergenic 40.0%
!!! TTGGTTTTGATACCTCTTGG+TGG + chr2.4:17723759-17723778 None:intergenic 40.0%
AAGCCTAATAATAGGCCTCC+TGG - chr2.4:17723813-17723832 MS.gene065168:intron 45.0%
ACCTTGAAGCAGCACTCATT+TGG + chr2.4:17724175-17724194 None:intergenic 45.0%
ACTTCAGCTATGATGGCTAC+TGG + chr2.4:17723233-17723252 None:intergenic 45.0%
CAACCAGGAGGCCTATTATT+AGG + chr2.4:17723819-17723838 None:intergenic 45.0%
GAAGATGTTGCAGCTCATGT+TGG - chr2.4:17724410-17724429 MS.gene065168:intron 45.0%
GCGAGGAATGATCATGAGAA+TGG - chr2.4:17724473-17724492 MS.gene065168:CDS 45.0%
GCTATGATGGCTACTGGTAA+AGG + chr2.4:17723227-17723246 None:intergenic 45.0%
GTACCACCATCAATCAACGT+GGG - chr2.4:17724149-17724168 MS.gene065168:intron 45.0%
GTAGGGTGAAATCGAAATCC+AGG + chr2.4:17723155-17723174 None:intergenic 45.0%
GTCACCAGTGGAACATGAAA+GGG - chr2.4:17724097-17724116 MS.gene065168:CDS 45.0%
GTCCCACCAGAAGTTAAAAC+AGG + chr2.4:17723690-17723709 None:intergenic 45.0%
TCTGGTGGGACACAAAAAGT+TGG - chr2.4:17723699-17723718 MS.gene065168:intron 45.0%
TCTGGTTATTGGAAGGCAAC+TGG - chr2.4:17723654-17723673 MS.gene065168:CDS 45.0%
TCTTCCCTTTCATGTTCCAC+TGG + chr2.4:17724104-17724123 None:intergenic 45.0%
TGTACCACCATCAATCAACG+TGG - chr2.4:17724148-17724167 MS.gene065168:intron 45.0%
TTGTTACCCAAGTCACAACC+AGG + chr2.4:17723834-17723853 None:intergenic 45.0%
! ATTTGGCCCACGTTGATTGA+TGG + chr2.4:17724158-17724177 None:intergenic 45.0%
! TTGATGATTGGGTGTTGTGC+CGG - chr2.4:17724048-17724067 MS.gene065168:CDS 45.0%
!! TTGCGAACCGGTTGATGAAT+CGG + chr2.4:17723117-17723136 None:intergenic 45.0%
CAACACACATAGGTCACCAG+TGG - chr2.4:17724085-17724104 MS.gene065168:CDS 50.0%
CAACGTTTGGAGAGCAAGAG+TGG - chr2.4:17723568-17723587 MS.gene065168:CDS 50.0%
CTGTTTGGCCTAGCTCCATT+CGG + chr2.4:17723624-17723643 None:intergenic 50.0%
GAATGGAGCTAGGCCAAACA+GGG - chr2.4:17723623-17723642 MS.gene065168:CDS 50.0%
GGGTGAAATCGAAATCCAGG+CGG + chr2.4:17723152-17723171 None:intergenic 50.0%
GGTCACCAGTGGAACATGAA+AGG - chr2.4:17724096-17724115 MS.gene065168:CDS 50.0%
GGTGAAATCGAAATCCAGGC+GGG + chr2.4:17723151-17723170 None:intergenic 50.0%
TTACCCAAGTCACAACCAGG+AGG + chr2.4:17723831-17723850 None:intergenic 50.0%
TTCGGATACTTCCTGTCCCT+TGG + chr2.4:17723606-17723625 None:intergenic 50.0%
TTTGATCCATGGGAGCTACC+AGG - chr2.4:17723266-17723285 MS.gene065168:CDS 50.0%
! GAGATTCGGTTGTTGCGAAC+CGG + chr2.4:17723129-17723148 None:intergenic 50.0%
! GGGCTGCAACTTCTGGTTAT+TGG - chr2.4:17723643-17723662 MS.gene065168:CDS 50.0%
! TATGGTGGGAAACCACCAAG+AGG - chr2.4:17723744-17723763 MS.gene065168:intron 50.0%
!! AGGGACAGGAAGTATCCGAA+TGG - chr2.4:17723606-17723625 MS.gene065168:CDS 50.0%
!! GCCAAATGAGTGCTGCTTCA+AGG - chr2.4:17724171-17724190 MS.gene065168:intron 50.0%
!! GGAAGTATCCGAATGGAGCT+AGG - chr2.4:17723613-17723632 MS.gene065168:CDS 50.0%
AGGCCTCCTGGTTGTGACTT+GGG - chr2.4:17723825-17723844 MS.gene065168:intron 55.0%
CCAAACAGGGCTGCAACTTC+TGG - chr2.4:17723636-17723655 MS.gene065168:CDS 55.0%
CCAGAAGTTGCAGCCCTGTT+TGG + chr2.4:17723639-17723658 None:intergenic 55.0%
CGAAATCCAGGCGGGAGATT+CGG + chr2.4:17723143-17723162 None:intergenic 55.0%
CGAATGGAGCTAGGCCAAAC+AGG - chr2.4:17723622-17723641 MS.gene065168:CDS 55.0%
TAGGCCTCCTGGTTGTGACT+TGG - chr2.4:17723824-17723843 MS.gene065168:intron 55.0%
! GAAGTACCTGGTAGCTCCCA+TGG + chr2.4:17723275-17723294 None:intergenic 55.0%
! TGGCCCACGTTGATTGATGG+TGG + chr2.4:17724155-17724174 None:intergenic 55.0%
CAACAACCGAATCTCCCGCC+TGG - chr2.4:17723134-17723153 MS.gene065168:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 17723104 17724619 17723104 ID=MS.gene065168
chr2.4 mRNA 17723104 17724619 17723104 ID=MS.gene065168.t1;Parent=MS.gene065168
chr2.4 exon 17724436 17724619 17724436 ID=MS.gene065168.t1.exon1;Parent=MS.gene065168.t1
chr2.4 CDS 17724436 17724619 17724436 ID=cds.MS.gene065168.t1;Parent=MS.gene065168.t1
chr2.4 exon 17723854 17724161 17723854 ID=MS.gene065168.t1.exon2;Parent=MS.gene065168.t1
chr2.4 CDS 17723854 17724161 17723854 ID=cds.MS.gene065168.t1;Parent=MS.gene065168.t1
chr2.4 exon 17723104 17723676 17723104 ID=MS.gene065168.t1.exon3;Parent=MS.gene065168.t1
chr2.4 CDS 17723104 17723676 17723104 ID=cds.MS.gene065168.t1;Parent=MS.gene065168.t1
Gene Sequence

>MS.gene065168

ATGGAAAGTACCGATTCATCAACCGGTTCGCAACAACCGAATCTCCCGCCTGGATTTCGATTTCACCCTACAGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCAGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGGTACTTCCAAAGATTACATATTTTCAAACTTTACGTTCAAATTCAAAATGAGTTTCTTTTGTTTTGTACTTTTTCTTCTATTTGTCTATCTATCTATTCTGGGAAAAGTCTTTTACTCAGATGATACGTGTTAGAATTTCACACATATTTTTCGATCATTTTTTCTTGCACGGGTTTTTTACTAGTTTTTTTTTTATTTTATTGATTTGATTATTTTGTTTTTTATTGTGATTACAAGTTTTTTTTTTTTGGGCACCCTTTTGGTTTTTTGTAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGGGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCTGTTTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGGAAACCACCAAGAGGTATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGGTAAGCTCAACTAATCCAAACTCTCTTTTTTTATCACACACAGTTAAATCAGCGACGAAAAATTACAAAACGTACAAAAAGTGATGTACGTCTGTGATTTTTTGTCGCTGATTCAACTTTTTTTATGATTTGTTTTGAATATTTTAGTTTAACTTTTTTGTGTGTGTGTATTTGTAGCTTGATGATTGGGTGTTGTGCCGGATCTACAAGAAAAGCAACACACATAGGTCACCAGTGGAACATGAAAGGGAAGATTCAATGGATGATATGATTGGAGGTGTACCACCATCAATCAACGTGGGCCAAATGAGTGCTGCTTCAAGGTTTCATAATTTTTCAAGGTTGTCATCAAATAACTACAGCAATGCATTGTTGGAAAATGACCAAAATTTACTAGAAGGAATGATGATGAATAACAACAATAATTTAGGAGGTTCAAATTCAAAGGCAGAGCTATCTTTTGCACCAACTATGACAACATCTTCAAATGCTAATTCACCTTCCAAAAGAACACTCTCTTCTCTTTATAATTGGAATGATGAAGATGTTGCAGCTCATGTTGGTACTTCATCATCTAACAAAAGATTTAGTTTGGAAAATGTTGCGAGGAATGATCATGAGAATGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATCTCCCTCAAACATCTTCATTGCATCAACCACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGTTAA

Protein sequence

>MS.gene065168.t1

MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHEREDSMDDMIGGVPPSINVGQMSAASRFHNFSRLSSNNYSNALLENDQNLLEGMMMNNNNNLGGSNSKAELSFAPTMTTSSNANSPSKRTLSSLYNWNDEDVAAHVGTSSSNKRFSLENVARNDHENGTVATSFASLLNNLPQTSSLHQPQTMLGSIPYQIQGMNWYG