Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050133.t1 | XP_003606383.1 | 98.2 | 285 | 5 | 0 | 1 | 285 | 1 | 285 | 5.80E-159 | 570.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050133.t1 | Q9ATM4 | 86.1 | 287 | 38 | 2 | 1 | 285 | 1 | 287 | 9.5e-142 | 504.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050133.t1 | G7JPC5 | 98.2 | 285 | 5 | 0 | 1 | 285 | 1 | 285 | 4.2e-159 | 570.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049400 | MS.gene050133 | 0.82586 | 3.72E-54 | -1.69E-46 |
MS.gene049757 | MS.gene050133 | -0.803848 | 2.87E-49 | -1.69E-46 |
MS.gene050060 | MS.gene050133 | -0.806247 | 9.03E-50 | -1.69E-46 |
MS.gene050133 | MS.gene050426 | 0.858127 | 1.02E-62 | -1.69E-46 |
MS.gene050133 | MS.gene051525 | -0.809904 | 1.50E-50 | -1.69E-46 |
MS.gene050133 | MS.gene051552 | 0.834076 | 3.69E-56 | -1.69E-46 |
MS.gene050133 | MS.gene052011 | 0.831108 | 2.01E-55 | -1.69E-46 |
MS.gene050133 | MS.gene052134 | -0.815026 | 1.14E-51 | -1.69E-46 |
MS.gene050133 | MS.gene052223 | 0.803924 | 2.76E-49 | -1.69E-46 |
MS.gene050133 | MS.gene052469 | -0.832607 | 8.58E-56 | -1.69E-46 |
MS.gene050133 | MS.gene052589 | -0.816263 | 6.05E-52 | -1.69E-46 |
MS.gene050133 | MS.gene052758 | -0.802503 | 5.44E-49 | -1.69E-46 |
MS.gene050133 | MS.gene053330 | -0.829687 | 4.48E-55 | -1.69E-46 |
MS.gene050133 | MS.gene054102 | -0.8236 | 1.27E-53 | -1.69E-46 |
MS.gene050133 | MS.gene054107 | -0.804601 | 2.00E-49 | -1.69E-46 |
MS.gene050133 | MS.gene054809 | 0.810759 | 9.82E-51 | -1.69E-46 |
MS.gene050133 | MS.gene055539 | -0.80333 | 3.67E-49 | -1.69E-46 |
MS.gene050133 | MS.gene05553 | -0.803483 | 3.41E-49 | -1.69E-46 |
MS.gene050133 | MS.gene05556 | -0.852307 | 5.03E-61 | -1.69E-46 |
MS.gene050133 | MS.gene056330 | 0.804865 | 1.76E-49 | -1.69E-46 |
MS.gene050133 | MS.gene056633 | -0.837577 | 4.79E-57 | -1.69E-46 |
MS.gene050133 | MS.gene056899 | 0.808231 | 3.43E-50 | -1.69E-46 |
MS.gene050133 | MS.gene058418 | 0.814986 | 1.16E-51 | -1.69E-46 |
MS.gene050133 | MS.gene059512 | -0.816535 | 5.26E-52 | -1.69E-46 |
MS.gene050133 | MS.gene059717 | -0.827132 | 1.85E-54 | -1.69E-46 |
MS.gene050133 | MS.gene060087 | 0.821196 | 4.59E-53 | -1.69E-46 |
MS.gene050133 | MS.gene06260 | -0.804114 | 2.52E-49 | -1.69E-46 |
MS.gene050133 | MS.gene063196 | -0.82455 | 7.60E-54 | -1.69E-46 |
MS.gene050133 | MS.gene064807 | 0.814291 | 1.66E-51 | -1.69E-46 |
MS.gene050133 | MS.gene065047 | 0.818803 | 1.62E-52 | -1.69E-46 |
MS.gene050133 | MS.gene065168 | -0.80087 | 1.18E-48 | -1.69E-46 |
MS.gene050133 | MS.gene06529 | 0.805286 | 1.44E-49 | -1.69E-46 |
MS.gene050133 | MS.gene065350 | 0.864146 | 1.50E-64 | -1.69E-46 |
MS.gene050133 | MS.gene065724 | 0.80085 | 1.19E-48 | -1.69E-46 |
MS.gene050133 | MS.gene066406 | -0.81482 | 1.27E-51 | -1.69E-46 |
MS.gene050133 | MS.gene066937 | 0.802703 | 4.95E-49 | -1.69E-46 |
MS.gene050133 | MS.gene06756 | 0.824966 | 6.06E-54 | -1.69E-46 |
MS.gene050133 | MS.gene069869 | 0.810859 | 9.35E-51 | -1.69E-46 |
MS.gene050133 | MS.gene070651 | 0.807682 | 4.49E-50 | -1.69E-46 |
MS.gene050133 | MS.gene071108 | 0.803155 | 3.99E-49 | -1.69E-46 |
MS.gene050133 | MS.gene071223 | -0.806454 | 8.16E-50 | -1.69E-46 |
MS.gene050133 | MS.gene071517 | -0.821017 | 5.05E-53 | -1.69E-46 |
MS.gene050133 | MS.gene071518 | -0.824933 | 6.17E-54 | -1.69E-46 |
MS.gene050133 | MS.gene071519 | -0.82449 | 7.85E-54 | -1.69E-46 |
MS.gene050133 | MS.gene071520 | -0.809282 | 2.04E-50 | -1.69E-46 |
MS.gene050133 | MS.gene072070 | -0.803758 | 2.99E-49 | -1.69E-46 |
MS.gene050133 | MS.gene072376 | 0.830751 | 2.46E-55 | -1.69E-46 |
MS.gene050133 | MS.gene072659 | 0.840769 | 7.12E-58 | -1.69E-46 |
MS.gene050133 | MS.gene073427 | -0.851926 | 6.45E-61 | -1.69E-46 |
MS.gene050133 | MS.gene074163 | -0.811613 | 6.41E-51 | -1.69E-46 |
MS.gene050133 | MS.gene07905 | 0.802371 | 5.79E-49 | -1.69E-46 |
MS.gene050133 | MS.gene08288 | -0.806349 | 8.59E-50 | -1.69E-46 |
MS.gene050133 | MS.gene08634 | 0.950042 | 3.72E-108 | -1.69E-46 |
MS.gene050133 | MS.gene08779 | -0.808518 | 2.98E-50 | -1.69E-46 |
MS.gene050133 | MS.gene08872 | 0.972669 | 3.82E-135 | -1.69E-46 |
MS.gene050133 | MS.gene08906 | -0.815077 | 1.11E-51 | -1.69E-46 |
MS.gene050133 | MS.gene08908 | -0.82046 | 6.78E-53 | -1.69E-46 |
MS.gene050133 | MS.gene09137 | -0.821943 | 3.09E-53 | -1.69E-46 |
MS.gene050133 | MS.gene09310 | -0.813995 | 1.93E-51 | -1.69E-46 |
MS.gene050133 | MS.gene09570 | -0.803386 | 3.57E-49 | -1.69E-46 |
MS.gene050133 | MS.gene09765 | -0.807837 | 4.16E-50 | -1.69E-46 |
MS.gene050133 | MS.gene09768 | 0.801016 | 1.10E-48 | -1.69E-46 |
MS.gene050133 | MS.gene09777 | -0.814259 | 1.69E-51 | -1.69E-46 |
MS.gene050133 | MS.gene09929 | -0.815935 | 7.16E-52 | -1.69E-46 |
MS.gene050133 | MS.gene20812 | -0.838511 | 2.75E-57 | -1.69E-46 |
MS.gene050133 | MS.gene20856 | -0.801136 | 1.04E-48 | -1.69E-46 |
MS.gene050133 | MS.gene22251 | -0.81685 | 4.47E-52 | -1.69E-46 |
MS.gene050133 | MS.gene23184 | 0.885316 | 9.03E-72 | -1.69E-46 |
MS.gene050133 | MS.gene23185 | 0.879051 | 1.71E-69 | -1.69E-46 |
MS.gene050133 | MS.gene23404 | 0.881243 | 2.82E-70 | -1.69E-46 |
MS.gene050133 | MS.gene23588 | 0.826896 | 2.11E-54 | -1.69E-46 |
MS.gene050133 | MS.gene24091 | 0.854268 | 1.38E-61 | -1.69E-46 |
MS.gene050133 | MS.gene24108 | 0.80543 | 1.34E-49 | -1.69E-46 |
MS.gene050133 | MS.gene24742 | -0.803826 | 2.90E-49 | -1.69E-46 |
MS.gene050133 | MS.gene25652 | 0.802272 | 6.07E-49 | -1.69E-46 |
MS.gene050133 | MS.gene26624 | 0.808384 | 3.18E-50 | -1.69E-46 |
MS.gene050133 | MS.gene27107 | 0.852403 | 4.72E-61 | -1.69E-46 |
MS.gene050133 | MS.gene27363 | -0.802988 | 4.32E-49 | -1.69E-46 |
MS.gene050133 | MS.gene28548 | 0.802637 | 5.10E-49 | -1.69E-46 |
MS.gene050133 | MS.gene28687 | -0.81283 | 3.48E-51 | -1.69E-46 |
MS.gene050133 | MS.gene28853 | 0.831632 | 1.50E-55 | -1.69E-46 |
MS.gene050133 | MS.gene29467 | -0.814935 | 1.20E-51 | -1.69E-46 |
MS.gene050133 | MS.gene29680 | 0.816546 | 5.23E-52 | -1.69E-46 |
MS.gene050133 | MS.gene29775 | -0.834554 | 2.80E-56 | -1.69E-46 |
MS.gene050133 | MS.gene29968 | -0.810456 | 1.14E-50 | -1.69E-46 |
MS.gene050133 | MS.gene30382 | 0.803547 | 3.31E-49 | -1.69E-46 |
MS.gene050133 | MS.gene30666 | 0.800584 | 1.35E-48 | -1.69E-46 |
MS.gene050133 | MS.gene31137 | -0.800637 | 1.31E-48 | -1.69E-46 |
MS.gene050133 | MS.gene32713 | -0.802777 | 4.78E-49 | -1.69E-46 |
MS.gene050133 | MS.gene33046 | 0.808775 | 2.62E-50 | -1.69E-46 |
MS.gene050133 | MS.gene33072 | -0.81355 | 2.42E-51 | -1.69E-46 |
MS.gene050133 | MS.gene34898 | -0.807989 | 3.86E-50 | -1.69E-46 |
MS.gene050133 | MS.gene35433 | 0.824985 | 6.00E-54 | -1.69E-46 |
MS.gene050133 | MS.gene35690 | 0.841627 | 4.24E-58 | -1.69E-46 |
MS.gene050133 | MS.gene35984 | -0.812314 | 4.51E-51 | -1.69E-46 |
MS.gene050133 | MS.gene36105 | -0.810402 | 1.17E-50 | -1.69E-46 |
MS.gene050133 | MS.gene36260 | -0.85565 | 5.47E-62 | -1.69E-46 |
MS.gene050133 | MS.gene38102 | 0.824598 | 7.40E-54 | -1.69E-46 |
MS.gene050133 | MS.gene38166 | 0.836403 | 9.55E-57 | -1.69E-46 |
MS.gene050133 | MS.gene39366 | -0.800484 | 1.41E-48 | -1.69E-46 |
MS.gene050133 | MS.gene41649 | -0.810419 | 1.16E-50 | -1.69E-46 |
MS.gene050133 | MS.gene42798 | -0.814451 | 1.53E-51 | -1.69E-46 |
MS.gene050133 | MS.gene43162 | 0.822213 | 2.67E-53 | -1.69E-46 |
MS.gene050133 | MS.gene43216 | 0.81192 | 5.50E-51 | -1.69E-46 |
MS.gene050133 | MS.gene43874 | 0.800847 | 1.19E-48 | -1.69E-46 |
MS.gene050133 | MS.gene44958 | 0.802428 | 5.64E-49 | -1.69E-46 |
MS.gene050133 | MS.gene47714 | -0.810364 | 1.20E-50 | -1.69E-46 |
MS.gene050133 | MS.gene48169 | 0.808698 | 2.73E-50 | -1.69E-46 |
MS.gene050133 | MS.gene49121 | -0.800337 | 1.51E-48 | -1.69E-46 |
MS.gene050133 | MS.gene49436 | -0.836845 | 7.37E-57 | -1.69E-46 |
MS.gene050133 | MS.gene49850 | -0.800825 | 1.20E-48 | -1.69E-46 |
MS.gene050133 | MS.gene51034 | -0.870083 | 1.91E-66 | -1.69E-46 |
MS.gene050133 | MS.gene54630 | 0.810932 | 9.01E-51 | -1.69E-46 |
MS.gene050133 | MS.gene54795 | -0.802643 | 5.09E-49 | -1.69E-46 |
MS.gene050133 | MS.gene56071 | -0.8193 | 1.25E-52 | -1.69E-46 |
MS.gene050133 | MS.gene56072 | -0.808296 | 3.32E-50 | -1.69E-46 |
MS.gene050133 | MS.gene56074 | -0.826953 | 2.04E-54 | -1.69E-46 |
MS.gene050133 | MS.gene56100 | -0.802304 | 5.98E-49 | -1.69E-46 |
MS.gene050133 | MS.gene56402 | -0.813273 | 2.78E-51 | -1.69E-46 |
MS.gene050133 | MS.gene56403 | -0.809202 | 2.13E-50 | -1.69E-46 |
MS.gene050133 | MS.gene56490 | -0.839997 | 1.13E-57 | -1.69E-46 |
MS.gene050133 | MS.gene57412 | 0.852984 | 3.23E-61 | -1.69E-46 |
MS.gene050133 | MS.gene57737 | 0.805306 | 1.42E-49 | -1.69E-46 |
MS.gene050133 | MS.gene58088 | 0.854835 | 9.45E-62 | -1.69E-46 |
MS.gene050133 | MS.gene58458 | 0.83035 | 3.09E-55 | -1.69E-46 |
MS.gene050133 | MS.gene58652 | -0.813379 | 2.64E-51 | -1.69E-46 |
MS.gene050133 | MS.gene58671 | -0.800982 | 1.12E-48 | -1.69E-46 |
MS.gene050133 | MS.gene58740 | 0.806536 | 7.84E-50 | -1.69E-46 |
MS.gene050133 | MS.gene58786 | 0.808529 | 2.96E-50 | -1.69E-46 |
MS.gene050133 | MS.gene58789 | -0.813415 | 2.59E-51 | -1.69E-46 |
MS.gene050133 | MS.gene59920 | 0.804354 | 2.25E-49 | -1.69E-46 |
MS.gene050133 | MS.gene60310 | 0.819036 | 1.43E-52 | -1.69E-46 |
MS.gene050133 | MS.gene60748 | -0.800617 | 1.33E-48 | -1.69E-46 |
MS.gene050133 | MS.gene61373 | -0.826168 | 3.15E-54 | -1.69E-46 |
MS.gene050133 | MS.gene61544 | -0.857997 | 1.11E-62 | -1.69E-46 |
MS.gene050133 | MS.gene62631 | 0.805468 | 1.32E-49 | -1.69E-46 |
MS.gene050133 | MS.gene62885 | 0.808307 | 3.30E-50 | -1.69E-46 |
MS.gene050133 | MS.gene62886 | 0.808556 | 2.92E-50 | -1.69E-46 |
MS.gene050133 | MS.gene66702 | -0.833937 | 4.00E-56 | -1.69E-46 |
MS.gene050133 | MS.gene66922 | -0.825782 | 3.89E-54 | -1.69E-46 |
MS.gene050133 | MS.gene67371 | 0.805567 | 1.25E-49 | -1.69E-46 |
MS.gene050133 | MS.gene67670 | 0.821998 | 3.00E-53 | -1.69E-46 |
MS.gene050133 | MS.gene68339 | -0.806705 | 7.23E-50 | -1.69E-46 |
MS.gene050133 | MS.gene68525 | -0.801141 | 1.04E-48 | -1.69E-46 |
MS.gene050133 | MS.gene68526 | -0.818267 | 2.14E-52 | -1.69E-46 |
MS.gene050133 | MS.gene70233 | 0.816352 | 5.78E-52 | -1.69E-46 |
MS.gene050133 | MS.gene71924 | 0.809043 | 2.30E-50 | -1.69E-46 |
MS.gene050133 | MS.gene71927 | 0.807938 | 3.96E-50 | -1.69E-46 |
MS.gene050133 | MS.gene72924 | 0.812423 | 4.27E-51 | -1.69E-46 |
MS.gene050133 | MS.gene73446 | -0.829619 | 4.65E-55 | -1.69E-46 |
MS.gene050133 | MS.gene73515 | -0.817863 | 2.64E-52 | -1.69E-46 |
MS.gene050133 | MS.gene73995 | 0.830944 | 2.21E-55 | -1.69E-46 |
MS.gene050133 | MS.gene74253 | 0.839994 | 1.14E-57 | -1.69E-46 |
MS.gene050133 | MS.gene74553 | 0.804539 | 2.06E-49 | -1.69E-46 |
MS.gene050133 | MS.gene74594 | -0.839363 | 1.66E-57 | -1.69E-46 |
MS.gene050133 | MS.gene74809 | -0.800612 | 1.33E-48 | -1.69E-46 |
MS.gene050133 | MS.gene74964 | 0.810823 | 9.52E-51 | -1.69E-46 |
MS.gene050133 | MS.gene75660 | -0.803291 | 3.74E-49 | -1.69E-46 |
MS.gene050133 | MS.gene76219 | 0.819568 | 1.08E-52 | -1.69E-46 |
MS.gene050133 | MS.gene76350 | -0.802608 | 5.17E-49 | -1.69E-46 |
MS.gene050133 | MS.gene76534 | 0.805167 | 1.52E-49 | -1.69E-46 |
MS.gene050133 | MS.gene77877 | -0.807512 | 4.88E-50 | -1.69E-46 |
MS.gene050133 | MS.gene78467 | -0.806335 | 8.65E-50 | -1.69E-46 |
MS.gene050133 | MS.gene78643 | -0.827628 | 1.41E-54 | -1.69E-46 |
MS.gene050133 | MS.gene78896 | -0.800065 | 1.72E-48 | -1.69E-46 |
MS.gene050133 | MS.gene79585 | 0.803371 | 3.60E-49 | -1.69E-46 |
MS.gene050133 | MS.gene79744 | -0.819209 | 1.31E-52 | -1.69E-46 |
MS.gene050133 | MS.gene79903 | -0.805969 | 1.03E-49 | -1.69E-46 |
MS.gene050133 | MS.gene79962 | 0.851345 | 9.43E-61 | -1.69E-46 |
MS.gene050133 | MS.gene80172 | -0.804355 | 2.25E-49 | -1.69E-46 |
MS.gene050133 | MS.gene80293 | 0.825837 | 3.77E-54 | -1.69E-46 |
MS.gene050133 | MS.gene81254 | -0.803981 | 2.69E-49 | -1.69E-46 |
MS.gene050133 | MS.gene81770 | 0.800103 | 1.69E-48 | -1.69E-46 |
MS.gene050133 | MS.gene81774 | 0.814764 | 1.31E-51 | -1.69E-46 |
MS.gene050133 | MS.gene84143 | 0.819264 | 1.27E-52 | -1.69E-46 |
MS.gene050133 | MS.gene84307 | 0.808745 | 2.66E-50 | -1.69E-46 |
MS.gene050133 | MS.gene84544 | -0.832089 | 1.15E-55 | -1.69E-46 |
MS.gene050133 | MS.gene85150 | 0.800768 | 1.23E-48 | -1.69E-46 |
MS.gene050133 | MS.gene85276 | 0.839324 | 1.70E-57 | -1.69E-46 |
MS.gene050133 | MS.gene85750 | 0.816861 | 4.44E-52 | -1.69E-46 |
MS.gene050133 | MS.gene85860 | -0.801137 | 1.04E-48 | -1.69E-46 |
MS.gene050133 | MS.gene86331 | -0.804353 | 2.25E-49 | -1.69E-46 |
MS.gene050133 | MS.gene86339 | -0.861965 | 7.08E-64 | -1.69E-46 |
MS.gene050133 | MS.gene87043 | 0.801672 | 8.06E-49 | -1.69E-46 |
MS.gene050133 | MS.gene87400 | -0.811408 | 7.11E-51 | -1.69E-46 |
MS.gene050133 | MS.gene88173 | -0.81815 | 2.28E-52 | -1.69E-46 |
MS.gene050133 | MS.gene88498 | -0.832778 | 7.79E-56 | -1.69E-46 |
MS.gene050133 | MS.gene88577 | -0.837387 | 5.36E-57 | -1.69E-46 |
MS.gene050133 | MS.gene88938 | 0.855965 | 4.43E-62 | -1.69E-46 |
MS.gene050133 | MS.gene88971 | 0.838928 | 2.15E-57 | -1.69E-46 |
MS.gene050133 | MS.gene88984 | 0.842884 | 1.97E-58 | -1.69E-46 |
MS.gene050133 | MS.gene89074 | -0.857565 | 1.50E-62 | -1.69E-46 |
MS.gene050133 | MS.gene89225 | -0.822371 | 2.45E-53 | -1.69E-46 |
MS.gene050133 | MS.gene90104 | 0.866096 | 3.66E-65 | -1.69E-46 |
MS.gene050133 | MS.gene90673 | -0.802192 | 6.30E-49 | -1.69E-46 |
MS.gene050133 | MS.gene90899 | 0.841666 | 4.14E-58 | -1.69E-46 |
MS.gene050133 | MS.gene91098 | -0.842513 | 2.47E-58 | -1.69E-46 |
MS.gene050133 | MS.gene92106 | -0.85581 | 4.91E-62 | -1.69E-46 |
MS.gene050133 | MS.gene94221 | 0.811691 | 6.17E-51 | -1.69E-46 |
MS.gene050133 | MS.gene96069 | -0.811093 | 8.32E-51 | -1.69E-46 |
MS.gene050133 | MS.gene96193 | 0.823817 | 1.13E-53 | -1.69E-46 |
MS.gene050133 | MS.gene97024 | 0.812762 | 3.60E-51 | -1.69E-46 |
MS.gene050133 | MS.gene98609 | -0.853347 | 2.54E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050133.t1 | MTR_4g059390 | 98.246 | 285 | 5 | 0 | 1 | 285 | 1 | 285 | 0.0 | 571 |
MS.gene050133.t1 | MTR_2g094270 | 85.017 | 287 | 41 | 2 | 1 | 285 | 1 | 287 | 1.31e-180 | 499 |
MS.gene050133.t1 | MTR_7g101190 | 80.702 | 285 | 55 | 0 | 1 | 285 | 1 | 285 | 2.12e-173 | 480 |
MS.gene050133.t1 | MTR_3g118010 | 77.695 | 269 | 54 | 1 | 16 | 284 | 14 | 276 | 1.50e-155 | 435 |
MS.gene050133.t1 | MTR_2g094270 | 84.000 | 250 | 38 | 2 | 1 | 248 | 1 | 250 | 2.06e-154 | 432 |
MS.gene050133.t1 | MTR_4g059390 | 99.010 | 202 | 2 | 0 | 1 | 202 | 1 | 202 | 6.67e-147 | 410 |
MS.gene050133.t1 | MTR_8g098375 | 67.293 | 266 | 80 | 2 | 12 | 276 | 25 | 284 | 7.04e-132 | 375 |
MS.gene050133.t1 | MTR_5g082070 | 68.015 | 272 | 80 | 3 | 7 | 277 | 23 | 288 | 4.96e-131 | 373 |
MS.gene050133.t1 | MTR_5g010150 | 68.165 | 267 | 78 | 2 | 12 | 277 | 25 | 285 | 7.32e-131 | 373 |
MS.gene050133.t1 | MTR_4g415300 | 66.171 | 269 | 85 | 1 | 9 | 277 | 26 | 288 | 1.22e-130 | 372 |
MS.gene050133.t1 | MTR_3g070210 | 65.217 | 276 | 89 | 2 | 3 | 277 | 19 | 288 | 2.71e-130 | 371 |
MS.gene050133.t1 | MTR_1g095070 | 83.163 | 196 | 33 | 0 | 89 | 284 | 23 | 218 | 1.40e-119 | 342 |
MS.gene050133.t1 | MTR_3g070210 | 66.000 | 250 | 78 | 2 | 3 | 251 | 19 | 262 | 2.36e-116 | 336 |
MS.gene050133.t1 | MTR_1g095070 | 84.375 | 160 | 25 | 0 | 89 | 248 | 23 | 182 | 8.32e-97 | 283 |
MS.gene050133.t1 | MTR_8g098375 | 62.085 | 211 | 71 | 3 | 12 | 219 | 25 | 229 | 7.83e-90 | 267 |
MS.gene050133.t1 | MTR_3g070210 | 64.179 | 201 | 65 | 2 | 3 | 202 | 19 | 213 | 4.05e-88 | 261 |
MS.gene050133.t1 | MTR_5g010150 | 67.188 | 192 | 56 | 2 | 12 | 202 | 25 | 210 | 4.99e-87 | 259 |
MS.gene050133.t1 | MTR_4g415300 | 64.948 | 194 | 62 | 1 | 9 | 202 | 26 | 213 | 5.54e-87 | 259 |
MS.gene050133.t1 | MTR_2g101370 | 38.494 | 239 | 125 | 6 | 39 | 273 | 20 | 240 | 3.52e-39 | 137 |
MS.gene050133.t1 | MTR_8g013680 | 39.224 | 232 | 119 | 6 | 39 | 266 | 19 | 232 | 3.64e-36 | 130 |
MS.gene050133.t1 | MTR_5g012810 | 37.712 | 236 | 130 | 5 | 39 | 273 | 19 | 238 | 1.03e-34 | 126 |
MS.gene050133.t1 | MTR_1g077540 | 36.052 | 233 | 133 | 6 | 39 | 270 | 21 | 238 | 3.87e-32 | 119 |
MS.gene050133.t1 | MTR_7g103030 | 33.600 | 250 | 149 | 6 | 30 | 278 | 12 | 245 | 1.22e-31 | 118 |
MS.gene050133.t1 | MTR_1g115405 | 35.366 | 246 | 135 | 7 | 30 | 270 | 12 | 238 | 2.74e-31 | 117 |
MS.gene050133.t1 | MTR_4g063090 | 33.610 | 241 | 135 | 7 | 44 | 278 | 26 | 247 | 2.51e-30 | 114 |
MS.gene050133.t1 | MTR_6g069040 | 36.179 | 246 | 135 | 6 | 29 | 270 | 11 | 238 | 4.45e-30 | 114 |
MS.gene050133.t1 | MTR_1g006590 | 33.462 | 260 | 134 | 11 | 30 | 278 | 10 | 241 | 3.47e-29 | 111 |
MS.gene050133.t1 | MTR_1g006490 | 34.263 | 251 | 130 | 11 | 30 | 271 | 10 | 234 | 4.28e-28 | 108 |
MS.gene050133.t1 | MTR_7g023350 | 34.728 | 239 | 132 | 7 | 39 | 272 | 21 | 240 | 4.75e-27 | 106 |
MS.gene050133.t1 | MTR_2g060360 | 34.426 | 244 | 138 | 8 | 30 | 270 | 11 | 235 | 4.39e-23 | 95.5 |
MS.gene050133.t1 | MTR_5g079570 | 30.208 | 192 | 114 | 5 | 82 | 269 | 73 | 248 | 2.69e-19 | 85.5 |
MS.gene050133.t1 | MTR_8g087710 | 30.222 | 225 | 132 | 7 | 37 | 259 | 37 | 238 | 5.83e-19 | 84.7 |
MS.gene050133.t1 | MTR_4g075570 | 26.641 | 259 | 156 | 8 | 22 | 259 | 27 | 272 | 9.05e-18 | 82.4 |
MS.gene050133.t1 | MTR_4g075590 | 27.309 | 249 | 154 | 8 | 27 | 261 | 25 | 260 | 1.11e-17 | 81.6 |
MS.gene050133.t1 | MTR_5g063930 | 29.381 | 194 | 124 | 4 | 78 | 269 | 65 | 247 | 1.40e-17 | 80.9 |
MS.gene050133.t1 | MTR_2g017660 | 29.487 | 234 | 138 | 7 | 39 | 269 | 39 | 248 | 2.81e-17 | 80.1 |
MS.gene050133.t1 | MTR_4g084880 | 30.220 | 182 | 107 | 4 | 82 | 259 | 71 | 236 | 4.35e-17 | 79.7 |
MS.gene050133.t1 | MTR_3g008920 | 28.646 | 192 | 117 | 5 | 82 | 269 | 59 | 234 | 3.56e-16 | 77.0 |
MS.gene050133.t1 | MTR_8g087720 | 28.452 | 239 | 143 | 7 | 36 | 271 | 35 | 248 | 7.75e-16 | 75.9 |
MS.gene050133.t1 | MTR_2g104940 | 28.899 | 218 | 131 | 7 | 43 | 259 | 84 | 278 | 1.70e-15 | 75.5 |
MS.gene050133.t1 | MTR_7g010650 | 27.753 | 227 | 134 | 6 | 37 | 259 | 35 | 235 | 2.64e-15 | 74.7 |
MS.gene050133.t1 | MTR_4g006730 | 27.206 | 272 | 153 | 9 | 21 | 282 | 68 | 304 | 2.71e-15 | 75.1 |
MS.gene050133.t1 | MTR_2g017620 | 28.444 | 225 | 136 | 6 | 37 | 259 | 22 | 223 | 6.78e-15 | 73.2 |
MS.gene050133.t1 | MTR_2g017620 | 28.444 | 225 | 136 | 6 | 37 | 259 | 36 | 237 | 8.40e-15 | 73.2 |
MS.gene050133.t1 | MTR_2g017590 | 29.412 | 238 | 140 | 8 | 37 | 271 | 34 | 246 | 1.34e-14 | 72.4 |
MS.gene050133.t1 | MTR_4g006630 | 28.889 | 180 | 115 | 4 | 80 | 259 | 20 | 186 | 1.84e-13 | 68.6 |
MS.gene050133.t1 | MTR_4g006730 | 28.889 | 180 | 115 | 4 | 80 | 259 | 20 | 186 | 1.84e-13 | 68.6 |
MS.gene050133.t1 | MTR_2g017610 | 30.928 | 194 | 113 | 7 | 82 | 271 | 72 | 248 | 2.12e-13 | 68.9 |
MS.gene050133.t1 | MTR_1g097840 | 26.506 | 249 | 160 | 7 | 36 | 283 | 71 | 297 | 2.94e-13 | 68.9 |
MS.gene050133.t1 | MTR_2g017570 | 29.534 | 193 | 117 | 6 | 82 | 271 | 72 | 248 | 4.73e-13 | 68.2 |
MS.gene050133.t1 | MTR_2g017620 | 30.588 | 170 | 102 | 4 | 92 | 259 | 1 | 156 | 9.15e-13 | 65.9 |
MS.gene050133.t1 | MTR_1g070385 | 26.050 | 238 | 149 | 6 | 36 | 271 | 59 | 271 | 3.66e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050133.t1 | AT2G37170 | 79.649 | 285 | 56 | 1 | 1 | 285 | 44 | 326 | 1.30e-168 | 470 |
MS.gene050133.t1 | AT5G60660 | 79.152 | 283 | 59 | 0 | 1 | 283 | 1 | 283 | 1.43e-168 | 468 |
MS.gene050133.t1 | AT2G37170 | 79.649 | 285 | 56 | 1 | 1 | 285 | 1 | 283 | 5.46e-168 | 467 |
MS.gene050133.t1 | AT2G37180 | 78.596 | 285 | 59 | 1 | 1 | 285 | 1 | 283 | 3.79e-165 | 459 |
MS.gene050133.t1 | AT3G53420 | 77.895 | 285 | 63 | 0 | 1 | 285 | 1 | 285 | 1.14e-163 | 456 |
MS.gene050133.t1 | AT3G53420 | 77.895 | 285 | 63 | 0 | 1 | 285 | 1 | 285 | 1.14e-163 | 456 |
MS.gene050133.t1 | AT4G35100 | 77.224 | 281 | 57 | 2 | 6 | 285 | 4 | 278 | 4.50e-159 | 444 |
MS.gene050133.t1 | AT4G35100 | 77.224 | 281 | 57 | 2 | 6 | 285 | 4 | 278 | 4.50e-159 | 444 |
MS.gene050133.t1 | AT2G39010 | 74.296 | 284 | 72 | 1 | 1 | 284 | 1 | 283 | 9.75e-159 | 443 |
MS.gene050133.t1 | AT3G54820 | 74.648 | 284 | 71 | 1 | 1 | 284 | 1 | 283 | 4.15e-158 | 442 |
MS.gene050133.t1 | AT2G16850 | 76.344 | 279 | 59 | 2 | 6 | 284 | 4 | 275 | 5.01e-155 | 434 |
MS.gene050133.t1 | AT4G00430 | 67.897 | 271 | 81 | 1 | 7 | 277 | 21 | 285 | 9.23e-133 | 377 |
MS.gene050133.t1 | AT2G45960 | 68.182 | 264 | 78 | 1 | 14 | 277 | 27 | 284 | 3.10e-130 | 371 |
MS.gene050133.t1 | AT4G23400 | 67.669 | 266 | 80 | 1 | 12 | 277 | 26 | 285 | 3.70e-124 | 356 |
MS.gene050133.t1 | AT1G01620 | 69.084 | 262 | 75 | 1 | 16 | 277 | 29 | 284 | 5.36e-124 | 355 |
MS.gene050133.t1 | AT3G61430 | 67.424 | 264 | 80 | 1 | 14 | 277 | 27 | 284 | 1.94e-122 | 351 |
MS.gene050133.t1 | AT3G61430 | 67.424 | 264 | 80 | 1 | 14 | 277 | 27 | 284 | 1.94e-122 | 351 |
MS.gene050133.t1 | AT2G45960 | 70.213 | 235 | 64 | 1 | 14 | 248 | 27 | 255 | 2.91e-117 | 338 |
MS.gene050133.t1 | AT2G45960 | 70.213 | 235 | 64 | 1 | 14 | 248 | 27 | 255 | 3.73e-116 | 336 |
MS.gene050133.t1 | AT1G01620 | 73.892 | 203 | 53 | 0 | 75 | 277 | 10 | 212 | 2.23e-107 | 310 |
MS.gene050133.t1 | AT2G39010 | 72.772 | 202 | 54 | 1 | 1 | 202 | 1 | 201 | 4.78e-106 | 307 |
MS.gene050133.t1 | AT4G00430 | 67.692 | 195 | 57 | 1 | 12 | 206 | 26 | 214 | 6.80e-90 | 266 |
MS.gene050133.t1 | AT3G16240 | 39.669 | 242 | 120 | 7 | 39 | 274 | 19 | 240 | 5.27e-37 | 132 |
MS.gene050133.t1 | AT5G47450 | 37.959 | 245 | 124 | 7 | 36 | 273 | 16 | 239 | 4.55e-36 | 129 |
MS.gene050133.t1 | AT3G26520 | 35.510 | 245 | 136 | 8 | 30 | 270 | 13 | 239 | 4.81e-33 | 122 |
MS.gene050133.t1 | AT1G73190 | 36.290 | 248 | 135 | 7 | 30 | 270 | 15 | 246 | 1.06e-32 | 121 |
MS.gene050133.t1 | AT4G17340 | 36.842 | 247 | 118 | 7 | 39 | 273 | 19 | 239 | 2.81e-32 | 119 |
MS.gene050133.t1 | AT4G01470 | 34.677 | 248 | 138 | 6 | 31 | 273 | 13 | 241 | 8.54e-32 | 118 |
MS.gene050133.t1 | AT1G17810 | 35.484 | 248 | 137 | 7 | 30 | 270 | 15 | 246 | 5.03e-31 | 117 |
MS.gene050133.t1 | AT2G36830 | 34.156 | 243 | 136 | 7 | 30 | 267 | 12 | 235 | 1.21e-30 | 115 |
MS.gene050133.t1 | AT2G25810 | 35.081 | 248 | 129 | 11 | 30 | 270 | 10 | 232 | 3.20e-26 | 103 |
MS.gene050133.t1 | AT3G47440 | 31.780 | 236 | 138 | 7 | 39 | 270 | 23 | 239 | 4.25e-24 | 98.6 |
MS.gene050133.t1 | AT4G19030 | 28.030 | 264 | 159 | 8 | 3 | 259 | 22 | 261 | 3.47e-17 | 80.1 |
MS.gene050133.t1 | AT1G31885 | 28.794 | 257 | 148 | 8 | 24 | 273 | 34 | 262 | 4.04e-17 | 80.5 |
MS.gene050133.t1 | AT5G37820 | 28.571 | 189 | 121 | 4 | 82 | 269 | 77 | 252 | 6.96e-15 | 73.6 |
MS.gene050133.t1 | AT5G37810 | 27.128 | 188 | 125 | 3 | 82 | 269 | 77 | 252 | 8.38e-15 | 73.2 |
MS.gene050133.t1 | AT5G37820 | 28.571 | 189 | 121 | 4 | 82 | 269 | 113 | 288 | 1.05e-14 | 73.6 |
MS.gene050133.t1 | AT1G31885 | 29.557 | 203 | 123 | 6 | 78 | 273 | 19 | 208 | 4.76e-14 | 70.9 |
MS.gene050133.t1 | AT2G34390 | 26.616 | 263 | 155 | 10 | 15 | 269 | 31 | 263 | 5.27e-14 | 71.2 |
MS.gene050133.t1 | AT4G10380 | 26.877 | 253 | 155 | 9 | 36 | 282 | 75 | 303 | 7.32e-14 | 70.9 |
MS.gene050133.t1 | AT2G34390 | 28.141 | 199 | 123 | 5 | 78 | 269 | 36 | 221 | 1.83e-13 | 68.9 |
MS.gene050133.t1 | AT3G06100 | 28.205 | 234 | 141 | 8 | 39 | 269 | 46 | 255 | 4.53e-12 | 65.5 |
MS.gene050133.t1 | AT4G18910 | 25.483 | 259 | 171 | 6 | 5 | 259 | 18 | 258 | 6.47e-12 | 65.1 |
MS.gene050133.t1 | AT3G06100 | 29.185 | 233 | 134 | 10 | 42 | 269 | 1 | 207 | 7.69e-11 | 61.2 |
Find 89 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGGTATTGCTTGGGCTTT+TGG | 0.189425 | 4.2:+44220311 | MS.gene050133:CDS |
CTGTGATGGTGTTGGAATTT+TGG | 0.191069 | 4.2:+44220292 | MS.gene050133:CDS |
TCTACAACGACGGCAAAATT+TGG | 0.232790 | 4.2:+44221464 | MS.gene050133:CDS |
GAGTCCCTAGCGTTTCTCTT+AGG | 0.240191 | 4.2:-44221219 | None:intergenic |
GAAGGATCCAAGAGCTTTAA+TGG | 0.276736 | 4.2:-44222166 | None:intergenic |
GTGATGAACAGTGGATATTC+TGG | 0.300046 | 4.2:+44222079 | MS.gene050133:intron |
ATCAACCCTGCCGTGACATT+CGG | 0.320599 | 4.2:+44220964 | MS.gene050133:CDS |
ATTAACCCGGCAAGAAGTTT+CGG | 0.346372 | 4.2:+44221430 | MS.gene050133:CDS |
TTCTGGGTTGGTCCAATGAT+TGG | 0.360668 | 4.2:+44222096 | MS.gene050133:CDS |
AAAGCATACTTTGACAGATA+TGG | 0.361824 | 4.2:+44221090 | MS.gene050133:CDS |
TTAAAGCTCTTGGATCCTTC+AGG | 0.374939 | 4.2:+44222169 | MS.gene050133:CDS |
CAGTCAGTACCACCAGCTTT+AGG | 0.379125 | 4.2:-44220272 | None:intergenic |
ACGGAAGGTGTCCTTGATTA+GGG | 0.379672 | 4.2:+44220999 | MS.gene050133:CDS |
GACGGAAGGTGTCCTTGATT+AGG | 0.381530 | 4.2:+44220998 | MS.gene050133:CDS |
TTAATACCGGTGCCGGTAAT+CGG | 0.383368 | 4.2:-44221412 | None:intergenic |
TACAACAAAGGCACAGCTTT+AGG | 0.394600 | 4.2:+44221141 | MS.gene050133:CDS |
GCTGATCCGAAACTTCTTGC+CGG | 0.395043 | 4.2:-44221436 | None:intergenic |
GCCACAGCAGCTCCAATCAT+TGG | 0.399751 | 4.2:-44222108 | None:intergenic |
TACTGCACCGCCGGTATCTC+TGG | 0.401254 | 4.2:+44220356 | MS.gene050133:CDS |
AGTCCCTAGCGTTTCTCTTA+GGG | 0.401907 | 4.2:-44221218 | None:intergenic |
CTACAACGACGGCAAAATTT+GGG | 0.406415 | 4.2:+44221465 | MS.gene050133:CDS |
TGGTCAAAACAGTGACATAA+AGG | 0.409034 | 4.2:-44220223 | None:intergenic |
GGTTCAGCCATTAAAGCTCT+TGG | 0.411321 | 4.2:+44222159 | MS.gene050133:CDS |
TAATACCGGTGCCGGTAATC+GGG | 0.412842 | 4.2:-44221411 | None:intergenic |
TCAACCCTGCCGTGACATTC+GGG | 0.414133 | 4.2:+44220965 | MS.gene050133:CDS |
ATGATTGGAGCTGCTGTGGC+TGG | 0.418679 | 4.2:+44222111 | MS.gene050133:CDS |
CGGCAAAATTTGGGATGATC+AGG | 0.438644 | 4.2:+44221474 | MS.gene050133:CDS |
TTGGAAACCTTTGGCAAGTC+CGG | 0.439461 | 4.2:-44221067 | None:intergenic |
TTGGCTACTATCCCGATTAC+CGG | 0.446732 | 4.2:+44221400 | MS.gene050133:CDS |
TCTATCAATGGTGCTGGAGG+TGG | 0.446868 | 4.2:-44220131 | None:intergenic |
GCTTTAGGTGCTGAAATCAT+TGG | 0.457763 | 4.2:+44221156 | MS.gene050133:CDS |
ACTTCTTGCCGGGTTAATAC+CGG | 0.464164 | 4.2:-44221425 | None:intergenic |
ATTCATGATGGCTACAACAA+AGG | 0.473294 | 4.2:+44221129 | MS.gene050133:CDS |
TGATGAACAGTGGATATTCT+GGG | 0.485567 | 4.2:+44222080 | MS.gene050133:intron |
CTGAACCTCTTAGAATGTAT+TGG | 0.489928 | 4.2:-44222143 | None:intergenic |
TACATGGCAGCACAGTGTGC+CGG | 0.490463 | 4.2:+44221030 | MS.gene050133:CDS |
CTGATCCGAAACTTCTTGCC+GGG | 0.491559 | 4.2:-44221435 | None:intergenic |
CTGGTGACTATAACCAATAA+TGG | 0.494832 | 4.2:-44220243 | None:intergenic |
ATCCTTGTTTACTGCACCGC+CGG | 0.495855 | 4.2:+44220347 | MS.gene050133:CDS |
TGCCGGGTTAATACCGGTGC+CGG | 0.514335 | 4.2:-44221419 | None:intergenic |
GCCGGCGCAATCTGTGGTAC+CGG | 0.516181 | 4.2:+44221048 | MS.gene050133:CDS |
CGTGACATTCGGGCTATTCG+TGG | 0.516571 | 4.2:+44220975 | MS.gene050133:CDS |
AACTCCTCAACATCTATCAA+TGG | 0.521123 | 4.2:-44220143 | None:intergenic |
TCAACATCTATCAATGGTGC+TGG | 0.524124 | 4.2:-44220137 | None:intergenic |
GTAAAACACTGCCCTAATCA+AGG | 0.525985 | 4.2:-44221010 | None:intergenic |
TACCACCAATACATTCTAAG+AGG | 0.529657 | 4.2:+44222138 | MS.gene050133:CDS |
TCCAATGATTGGAGCTGCTG+TGG | 0.531304 | 4.2:+44222107 | MS.gene050133:CDS |
GTAGCCATCATGAATAAAGT+TGG | 0.531597 | 4.2:-44221121 | None:intergenic |
GGTGCCAACTTTATTCATGA+TGG | 0.535166 | 4.2:+44221117 | MS.gene050133:CDS |
TTATAGCATACCAGAGATAC+CGG | 0.539251 | 4.2:-44220366 | None:intergenic |
CTATCAATGGTGCTGGAGGT+GGG | 0.552912 | 4.2:-44220130 | None:intergenic |
AATAGCCCGAATGTCACGGC+AGG | 0.553742 | 4.2:-44220970 | None:intergenic |
ATGAAAACAGCAAATCCAAT+GGG | 0.555341 | 4.2:-44221370 | None:intergenic |
CACCAGTCTGATCCTAAAGC+TGG | 0.557436 | 4.2:+44220260 | MS.gene050133:CDS |
TAATTAAGCATTGCTCCTGA+AGG | 0.559103 | 4.2:-44222184 | None:intergenic |
AACCTCTTAGAATGTATTGG+TGG | 0.561973 | 4.2:-44222140 | None:intergenic |
CGGGCTATTCGTGGGACGGA+AGG | 0.562748 | 4.2:+44220984 | MS.gene050133:CDS |
GGTACTGACTGTGATGGTGT+TGG | 0.572709 | 4.2:+44220284 | MS.gene050133:CDS |
ACAGCAAATCCAATGGGAAG+TGG | 0.574194 | 4.2:-44221364 | None:intergenic |
AGCACCATTGATAGATGTTG+AGG | 0.575497 | 4.2:+44220139 | MS.gene050133:CDS |
TACCGGCGGTGCAGTAAACA+AGG | 0.576199 | 4.2:-44220349 | None:intergenic |
GATGTTGAGGTTCAAGAACA+AGG | 0.576725 | 4.2:+44220080 | MS.gene050133:CDS |
CAGTGTGCCGGCGCAATCTG+TGG | 0.577018 | 4.2:+44221042 | MS.gene050133:CDS |
TTTGCCGTCGTTGTAGATCA+CGG | 0.578627 | 4.2:-44221458 | None:intergenic |
CACGAATAGCCCGAATGTCA+CGG | 0.582521 | 4.2:-44220974 | None:intergenic |
ATTATATGCTTACAGGAACA+TGG | 0.583004 | 4.2:-44221242 | None:intergenic |
CAATATGGCTAAAGATGTTG+AGG | 0.583700 | 4.2:+44220067 | None:intergenic |
ACATCTATCAATGGTGCTGG+AGG | 0.589837 | 4.2:-44220134 | None:intergenic |
TACCGGCACCGGTATTAACC+CGG | 0.590468 | 4.2:+44221417 | MS.gene050133:CDS |
TGTGGTACCGGACTTGCCAA+AGG | 0.598591 | 4.2:+44221060 | MS.gene050133:CDS |
CATGAAAACAGCAAATCCAA+TGG | 0.600094 | 4.2:-44221371 | None:intergenic |
TACTTTGACAGATATGGAGG+TGG | 0.607215 | 4.2:+44221096 | MS.gene050133:CDS |
GTGACATTCGGGCTATTCGT+GGG | 0.608893 | 4.2:+44220976 | MS.gene050133:CDS |
CACCAGCTTTAGGATCAGAC+TGG | 0.622507 | 4.2:-44220262 | None:intergenic |
CTGACCCTAAGAGAAACGCT+AGG | 0.623716 | 4.2:+44221214 | MS.gene050133:CDS |
TCCGGTACCACAGATTGCGC+CGG | 0.626783 | 4.2:-44221049 | None:intergenic |
TCAGCCGTGATCTACAACGA+CGG | 0.628333 | 4.2:+44221454 | MS.gene050133:CDS |
GACAGTGTAGACAAGAACAA+AGG | 0.629321 | 4.2:-44221181 | None:intergenic |
GCATACTTTGACAGATATGG+AGG | 0.633916 | 4.2:+44221093 | MS.gene050133:CDS |
CATTCGGGCTATTCGTGGGA+CGG | 0.637960 | 4.2:+44220980 | MS.gene050133:CDS |
TTATATGCTTACAGGAACAT+GGG | 0.643732 | 4.2:-44221241 | None:intergenic |
CAGTCTGATCCTAAAGCTGG+TGG | 0.645930 | 4.2:+44220263 | MS.gene050133:CDS |
TGACCCTAAGAGAAACGCTA+GGG | 0.652651 | 4.2:+44221215 | MS.gene050133:CDS |
GCTGGTGGTACTGACTGTGA+TGG | 0.654915 | 4.2:+44220278 | MS.gene050133:CDS |
ACTATCCCGATTACCGGCAC+CGG | 0.654923 | 4.2:+44221406 | MS.gene050133:CDS |
GAACAGTGGATATTCTGGGT+TGG | 0.667916 | 4.2:+44222084 | MS.gene050133:intron |
ATAGCCCGAATGTCACGGCA+GGG | 0.681726 | 4.2:-44220969 | None:intergenic |
ATGTTGAGGAGTTAACAAAG+TGG | 0.737517 | 4.2:+44220153 | MS.gene050133:CDS |
TAGCATACCAGAGATACCGG+CGG | 0.755151 | 4.2:-44220363 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAATTTGCTATTAAATT+TGG | + | chr4.2:44220423-44220442 | MS.gene050133:intron | 10.0% |
!!! | ATAAATTTACTAGTATTTTA+TGG | + | chr4.2:44220873-44220892 | MS.gene050133:intron | 10.0% |
!! | TGATAAAATACAAACAAATA+TGG | - | chr4.2:44220714-44220733 | None:intergenic | 15.0% |
!!! | TAGTCTAGAATTTATTTTTA+AGG | + | chr4.2:44221673-44221692 | MS.gene050133:intron | 15.0% |
!! | AGTACTTATTATGAAGAAAA+AGG | - | chr4.2:44221294-44221313 | None:intergenic | 20.0% |
!! | CATTCAATTAATGATGTATA+TGG | + | chr4.2:44221925-44221944 | MS.gene050133:intron | 20.0% |
!! | CATTCATTAAATGATGTATA+TGG | - | chr4.2:44221964-44221983 | None:intergenic | 20.0% |
!! | GTTTATAATTATATGCTTAC+AGG | - | chr4.2:44221252-44221271 | None:intergenic | 20.0% |
!!! | ATTTTACAACCGTTTATTTA+AGG | + | chr4.2:44221544-44221563 | MS.gene050133:intron | 20.0% |
!!! | ATTTTGCTTATATAAATGAC+CGG | + | chr4.2:44221999-44222018 | MS.gene050133:intron | 20.0% |
!!! | TCACAATATGAAAGTTTTAT+AGG | + | chr4.2:44220649-44220668 | MS.gene050133:intron | 20.0% |
!!! | TTTTATGGATAAATGTTAGT+TGG | + | chr4.2:44220888-44220907 | MS.gene050133:intron | 20.0% |
! | TATATTAACGAGTTTATGTG+TGG | + | chr4.2:44220919-44220938 | MS.gene050133:intron | 25.0% |
AAAGCATACTTTGACAGATA+TGG | + | chr4.2:44221090-44221109 | MS.gene050133:CDS | 30.0% | |
AGCATAACTAACTATGTGTT+TGG | + | chr4.2:44221317-44221336 | MS.gene050133:intron | 30.0% | |
ATGAAAACAGCAAATCCAAT+GGG | - | chr4.2:44221373-44221392 | None:intergenic | 30.0% | |
ATTATATGCTTACAGGAACA+TGG | - | chr4.2:44221245-44221264 | None:intergenic | 30.0% | |
ATTTAAGGAGACTTAGGTTT+AGG | + | chr4.2:44221559-44221578 | MS.gene050133:intron | 30.0% | |
CAAAATGAGCAACTTTACAT+TGG | - | chr4.2:44221806-44221825 | None:intergenic | 30.0% | |
CCTAAGTCTCCTTAAATAAA+CGG | - | chr4.2:44221556-44221575 | None:intergenic | 30.0% | |
GTTGTAGTTACAATTAAGCT+AGG | - | chr4.2:44220750-44220769 | None:intergenic | 30.0% | |
TGAAGCATAATTCCATATTG+CGG | + | chr4.2:44220626-44220645 | MS.gene050133:intron | 30.0% | |
TTATATGCTTACAGGAACAT+GGG | - | chr4.2:44221244-44221263 | None:intergenic | 30.0% | |
! | ATCTGTCAAAGTATGCTTTT+TGG | - | chr4.2:44221089-44221108 | None:intergenic | 30.0% |
! | CAATGTAAAGTTGCTCATTT+TGG | + | chr4.2:44221804-44221823 | MS.gene050133:intron | 30.0% |
! | GGAGGGTGTATTTAAAAATA+GGG | - | chr4.2:44221869-44221888 | None:intergenic | 30.0% |
! | GTGAAATGATGAAAAGGTTT+TGG | + | chr4.2:44221339-44221358 | MS.gene050133:intron | 30.0% |
! | GTTTTGCTTATAATAGTGAC+CGG | - | chr4.2:44221890-44221909 | None:intergenic | 30.0% |
! | TGTTTGGTGAAATGATGAAA+AGG | + | chr4.2:44221333-44221352 | MS.gene050133:intron | 30.0% |
!!! | ATTGTTTTTGTGATGAACAG+TGG | + | chr4.2:44222070-44222089 | MS.gene050133:intron | 30.0% |
!!! | CTATTTTTAAATACACCCTC+CGG | + | chr4.2:44221868-44221887 | MS.gene050133:intron | 30.0% |
!!! | TTCATCTTCTTTTTCGATCA+GGG | - | chr4.2:44220554-44220573 | None:intergenic | 30.0% |
!!! | TTTCATCTTCTTTTTCGATC+AGG | - | chr4.2:44220555-44220574 | None:intergenic | 30.0% |
AACCTCTTAGAATGTATTGG+TGG | - | chr4.2:44222143-44222162 | None:intergenic | 35.0% | |
AACTCCTCAACATCTATCAA+TGG | - | chr4.2:44220146-44220165 | None:intergenic | 35.0% | |
ATGTTGAGGAGTTAACAAAG+TGG | + | chr4.2:44220153-44220172 | MS.gene050133:CDS | 35.0% | |
ATTCATGATGGCTACAACAA+AGG | + | chr4.2:44221129-44221148 | MS.gene050133:CDS | 35.0% | |
CATGAAAACAGCAAATCCAA+TGG | - | chr4.2:44221374-44221393 | None:intergenic | 35.0% | |
CCGTTTATTTAAGGAGACTT+AGG | + | chr4.2:44221553-44221572 | MS.gene050133:intron | 35.0% | |
CTGAACCTCTTAGAATGTAT+TGG | - | chr4.2:44222146-44222165 | None:intergenic | 35.0% | |
CTGAGATAGTAAAAGATTGC+AGG | + | chr4.2:44220509-44220528 | MS.gene050133:intron | 35.0% | |
CTGGTGACTATAACCAATAA+TGG | - | chr4.2:44220246-44220265 | None:intergenic | 35.0% | |
GTAGCCATCATGAATAAAGT+TGG | - | chr4.2:44221124-44221143 | None:intergenic | 35.0% | |
TACCACCAATACATTCTAAG+AGG | + | chr4.2:44222138-44222157 | MS.gene050133:CDS | 35.0% | |
TGATGAACAGTGGATATTCT+GGG | + | chr4.2:44222080-44222099 | MS.gene050133:intron | 35.0% | |
TGGTCAAAACAGTGACATAA+AGG | - | chr4.2:44220226-44220245 | None:intergenic | 35.0% | |
TTATAGCATACCAGAGATAC+CGG | - | chr4.2:44220369-44220388 | None:intergenic | 35.0% | |
TTATTATCACATACAGCCTC+CGG | - | chr4.2:44222021-44222040 | None:intergenic | 35.0% | |
TTCATATTGTGACCGCAATA+TGG | - | chr4.2:44220641-44220660 | None:intergenic | 35.0% | |
TTCCTTAACATGTGCATCAA+GGG | - | chr4.2:44221715-44221734 | None:intergenic | 35.0% | |
TTGCTTATATAAATGACCGG+AGG | + | chr4.2:44222002-44222021 | MS.gene050133:intron | 35.0% | |
! | CGGAGGGTGTATTTAAAAAT+AGG | - | chr4.2:44221870-44221889 | None:intergenic | 35.0% |
!! | GTATGCTTTTTGGAAACCTT+TGG | - | chr4.2:44221079-44221098 | None:intergenic | 35.0% |
!! | TGGAATTTTGGGTATTGCTT+GGG | + | chr4.2:44220304-44220323 | MS.gene050133:CDS | 35.0% |
!! | TGTGATGGTGTTGGAATTTT+GGG | + | chr4.2:44220293-44220312 | MS.gene050133:CDS | 35.0% |
!! | TTGGAATTTTGGGTATTGCT+TGG | + | chr4.2:44220303-44220322 | MS.gene050133:CDS | 35.0% |
!!! | CATTGGATTTGCTGTTTTCA+TGG | + | chr4.2:44221372-44221391 | MS.gene050133:CDS | 35.0% |
!!! | GTCACTGTTTTGACCATTAT+TGG | + | chr4.2:44220230-44220249 | MS.gene050133:CDS | 35.0% |
AGCACCATTGATAGATGTTG+AGG | + | chr4.2:44220139-44220158 | MS.gene050133:CDS | 40.0% | |
ATGGCATGCAACCACAATTA+GGG | - | chr4.2:44220695-44220714 | None:intergenic | 40.0% | |
ATTAACCCGGCAAGAAGTTT+CGG | + | chr4.2:44221430-44221449 | MS.gene050133:CDS | 40.0% | |
CTACAACGACGGCAAAATTT+GGG | + | chr4.2:44221465-44221484 | MS.gene050133:CDS | 40.0% | |
GACAGTGTAGACAAGAACAA+AGG | - | chr4.2:44221184-44221203 | None:intergenic | 40.0% | |
GATGTTGAGGTTCAAGAACA+AGG | + | chr4.2:44220080-44220099 | MS.gene050133:CDS | 40.0% | |
GCATACTTTGACAGATATGG+AGG | + | chr4.2:44221093-44221112 | MS.gene050133:CDS | 40.0% | |
GGTGCCAACTTTATTCATGA+TGG | + | chr4.2:44221117-44221136 | MS.gene050133:CDS | 40.0% | |
GTAAAACACTGCCCTAATCA+AGG | - | chr4.2:44221013-44221032 | None:intergenic | 40.0% | |
GTGATGAACAGTGGATATTC+TGG | + | chr4.2:44222079-44222098 | MS.gene050133:intron | 40.0% | |
GTTCCTTAACATGTGCATCA+AGG | - | chr4.2:44221716-44221735 | None:intergenic | 40.0% | |
TACTTTGACAGATATGGAGG+TGG | + | chr4.2:44221096-44221115 | MS.gene050133:CDS | 40.0% | |
TATGGCATGCAACCACAATT+AGG | - | chr4.2:44220696-44220715 | None:intergenic | 40.0% | |
TCAACATCTATCAATGGTGC+TGG | - | chr4.2:44220140-44220159 | None:intergenic | 40.0% | |
TCTACAACGACGGCAAAATT+TGG | + | chr4.2:44221464-44221483 | MS.gene050133:CDS | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr4.2:44221886-44221905 | None:intergenic | 40.0% | |
TTAAAGCTCTTGGATCCTTC+AGG | + | chr4.2:44222169-44222188 | MS.gene050133:CDS | 40.0% | |
TTCCTTAACATGTGCCCTTA+GGG | + | chr4.2:44221828-44221847 | MS.gene050133:intron | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr4.2:44221887-44221906 | None:intergenic | 40.0% | |
TTTCCTTAACATGTGCCCTT+AGG | + | chr4.2:44221827-44221846 | MS.gene050133:intron | 40.0% | |
! | GAAGGATCCAAGAGCTTTAA+TGG | - | chr4.2:44222169-44222188 | None:intergenic | 40.0% |
! | GATTAGGGCAGTGTTTTACA+TGG | + | chr4.2:44221014-44221033 | MS.gene050133:CDS | 40.0% |
! | TACAACAAAGGCACAGCTTT+AGG | + | chr4.2:44221141-44221160 | MS.gene050133:CDS | 40.0% |
!! | CATGTTAACTTGTGCCCTAA+GGG | - | chr4.2:44221845-44221864 | None:intergenic | 40.0% |
!! | CTGTGATGGTGTTGGAATTT+TGG | + | chr4.2:44220292-44220311 | MS.gene050133:CDS | 40.0% |
!! | GCTTTAGGTGCTGAAATCAT+TGG | + | chr4.2:44221156-44221175 | MS.gene050133:CDS | 40.0% |
!! | TCATGTTAACTTGTGCCCTA+AGG | - | chr4.2:44221846-44221865 | None:intergenic | 40.0% |
!!! | TGCTGTTTTCATGGTTCACT+TGG | + | chr4.2:44221381-44221400 | MS.gene050133:CDS | 40.0% |
ACAGCAAATCCAATGGGAAG+TGG | - | chr4.2:44221367-44221386 | None:intergenic | 45.0% | |
ACTTCTTGCCGGGTTAATAC+CGG | - | chr4.2:44221428-44221447 | None:intergenic | 45.0% | |
AGTCCCTAGCGTTTCTCTTA+GGG | - | chr4.2:44221221-44221240 | None:intergenic | 45.0% | |
ATGTGTGGAATTGTGATCCC+AGG | + | chr4.2:44220934-44220953 | MS.gene050133:intron | 45.0% | |
CGACATAGCAACCCTAATTG+TGG | + | chr4.2:44220681-44220700 | MS.gene050133:intron | 45.0% | |
GAACAGTGGATATTCTGGGT+TGG | + | chr4.2:44222084-44222103 | MS.gene050133:intron | 45.0% | |
GGTTCAGCCATTAAAGCTCT+TGG | + | chr4.2:44222159-44222178 | MS.gene050133:CDS | 45.0% | |
TGACCCTAAGAGAAACGCTA+GGG | + | chr4.2:44221215-44221234 | MS.gene050133:CDS | 45.0% | |
TGCCCTTGATGCACATGTTA+AGG | + | chr4.2:44221710-44221729 | MS.gene050133:intron | 45.0% | |
TTGGAAACCTTTGGCAAGTC+CGG | - | chr4.2:44221070-44221089 | None:intergenic | 45.0% | |
TTGGCTACTATCCCGATTAC+CGG | + | chr4.2:44221400-44221419 | MS.gene050133:CDS | 45.0% | |
TTTGCCGTCGTTGTAGATCA+CGG | - | chr4.2:44221461-44221480 | None:intergenic | 45.0% | |
! | ACATCTATCAATGGTGCTGG+AGG | - | chr4.2:44220137-44220156 | None:intergenic | 45.0% |
! | CGGCAAAATTTGGGATGATC+AGG | + | chr4.2:44221474-44221493 | MS.gene050133:CDS | 45.0% |
!! | ACGGAAGGTGTCCTTGATTA+GGG | + | chr4.2:44220999-44221018 | MS.gene050133:CDS | 45.0% |
!! | TTAATACCGGTGCCGGTAAT+CGG | - | chr4.2:44221415-44221434 | None:intergenic | 45.0% |
!! | TTCTGGGTTGGTCCAATGAT+TGG | + | chr4.2:44222096-44222115 | MS.gene050133:CDS | 45.0% |
!! | TTGGGTATTGCTTGGGCTTT+TGG | + | chr4.2:44220311-44220330 | MS.gene050133:CDS | 45.0% |
!! | TAATTAATAATTTAATGATA+TGG | - | chr4.2:44221507-44221526 | None:intergenic | 5.0% |
ATCAACCCTGCCGTGACATT+CGG | + | chr4.2:44220964-44220983 | MS.gene050133:CDS | 50.0% | |
CACCAGTCTGATCCTAAAGC+TGG | + | chr4.2:44220260-44220279 | MS.gene050133:CDS | 50.0% | |
CACGAATAGCCCGAATGTCA+CGG | - | chr4.2:44220977-44220996 | None:intergenic | 50.0% | |
CAGTCAGTACCACCAGCTTT+AGG | - | chr4.2:44220275-44220294 | None:intergenic | 50.0% | |
CAGTCTGATCCTAAAGCTGG+TGG | + | chr4.2:44220263-44220282 | MS.gene050133:CDS | 50.0% | |
CTGACCCTAAGAGAAACGCT+AGG | + | chr4.2:44221214-44221233 | MS.gene050133:CDS | 50.0% | |
CTGATCCGAAACTTCTTGCC+GGG | - | chr4.2:44221438-44221457 | None:intergenic | 50.0% | |
GAGTCCCTAGCGTTTCTCTT+AGG | - | chr4.2:44221222-44221241 | None:intergenic | 50.0% | |
GCTGATCCGAAACTTCTTGC+CGG | - | chr4.2:44221439-44221458 | None:intergenic | 50.0% | |
GTGACATTCGGGCTATTCGT+GGG | + | chr4.2:44220976-44220995 | MS.gene050133:CDS | 50.0% | |
TAGCATACCAGAGATACCGG+CGG | - | chr4.2:44220366-44220385 | None:intergenic | 50.0% | |
TCAGCCGTGATCTACAACGA+CGG | + | chr4.2:44221454-44221473 | MS.gene050133:CDS | 50.0% | |
TCCAATGATTGGAGCTGCTG+TGG | + | chr4.2:44222107-44222126 | MS.gene050133:CDS | 50.0% | |
TGTGGAATTGTGATCCCAGG+AGG | + | chr4.2:44220937-44220956 | MS.gene050133:intron | 50.0% | |
! | ATCCTTGTTTACTGCACCGC+CGG | + | chr4.2:44220347-44220366 | MS.gene050133:CDS | 50.0% |
! | CTATCAATGGTGCTGGAGGT+GGG | - | chr4.2:44220133-44220152 | None:intergenic | 50.0% |
! | GGTATTGCTTGGGCTTTTGG+TGG | + | chr4.2:44220314-44220333 | MS.gene050133:CDS | 50.0% |
! | TCTATCAATGGTGCTGGAGG+TGG | - | chr4.2:44220134-44220153 | None:intergenic | 50.0% |
! | TGCCCTAAGGGCACATGTTA+AGG | - | chr4.2:44221833-44221852 | None:intergenic | 50.0% |
!! | CACCAGCTTTAGGATCAGAC+TGG | - | chr4.2:44220265-44220284 | None:intergenic | 50.0% |
!! | GACGGAAGGTGTCCTTGATT+AGG | + | chr4.2:44220998-44221017 | MS.gene050133:CDS | 50.0% |
!! | GGTACTGACTGTGATGGTGT+TGG | + | chr4.2:44220284-44220303 | MS.gene050133:CDS | 50.0% |
!! | GTTTTGGCACCACTTCCCAT+TGG | + | chr4.2:44221355-44221374 | MS.gene050133:CDS | 50.0% |
!! | TAATACCGGTGCCGGTAATC+GGG | - | chr4.2:44221414-44221433 | None:intergenic | 50.0% |
AATAGCCCGAATGTCACGGC+AGG | - | chr4.2:44220973-44220992 | None:intergenic | 55.0% | |
ACTATCCCGATTACCGGCAC+CGG | + | chr4.2:44221406-44221425 | MS.gene050133:CDS | 55.0% | |
ATAGCCCGAATGTCACGGCA+GGG | - | chr4.2:44220972-44220991 | None:intergenic | 55.0% | |
ATGATTGGAGCTGCTGTGGC+TGG | + | chr4.2:44222111-44222130 | MS.gene050133:CDS | 55.0% | |
CATTCGGGCTATTCGTGGGA+CGG | + | chr4.2:44220980-44220999 | MS.gene050133:CDS | 55.0% | |
CGTGACATTCGGGCTATTCG+TGG | + | chr4.2:44220975-44220994 | MS.gene050133:CDS | 55.0% | |
GCCACAGCAGCTCCAATCAT+TGG | - | chr4.2:44222111-44222130 | None:intergenic | 55.0% | |
TACATGGCAGCACAGTGTGC+CGG | + | chr4.2:44221030-44221049 | MS.gene050133:CDS | 55.0% | |
TACCGGCGGTGCAGTAAACA+AGG | - | chr4.2:44220352-44220371 | None:intergenic | 55.0% | |
TCAACCCTGCCGTGACATTC+GGG | + | chr4.2:44220965-44220984 | MS.gene050133:CDS | 55.0% | |
! | TGTGGTACCGGACTTGCCAA+AGG | + | chr4.2:44221060-44221079 | MS.gene050133:CDS | 55.0% |
!! | CAGGGTTGATGTGTCCTCCT+GGG | - | chr4.2:44220954-44220973 | None:intergenic | 55.0% |
!! | GCTGGTGGTACTGACTGTGA+TGG | + | chr4.2:44220278-44220297 | MS.gene050133:CDS | 55.0% |
!! | TACCGGCACCGGTATTAACC+CGG | + | chr4.2:44221417-44221436 | MS.gene050133:CDS | 55.0% |
TACTGCACCGCCGGTATCTC+TGG | + | chr4.2:44220356-44220375 | MS.gene050133:CDS | 60.0% | |
TCCGGTACCACAGATTGCGC+CGG | - | chr4.2:44221052-44221071 | None:intergenic | 60.0% | |
TGCCGGGTTAATACCGGTGC+CGG | - | chr4.2:44221422-44221441 | None:intergenic | 60.0% | |
!! | GCAGGGTTGATGTGTCCTCC+TGG | - | chr4.2:44220955-44220974 | None:intergenic | 60.0% |
CGGGCTATTCGTGGGACGGA+AGG | + | chr4.2:44220984-44221003 | MS.gene050133:CDS | 65.0% | |
GCCGGCGCAATCTGTGGTAC+CGG | + | chr4.2:44221048-44221067 | MS.gene050133:CDS | 65.0% | |
! | CAGTGTGCCGGCGCAATCTG+TGG | + | chr4.2:44221042-44221061 | MS.gene050133:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 44220071 | 44222203 | 44220071 | ID=MS.gene050133 |
chr4.2 | mRNA | 44220071 | 44222203 | 44220071 | ID=MS.gene050133.t1;Parent=MS.gene050133 |
chr4.2 | exon | 44220071 | 44220377 | 44220071 | ID=MS.gene050133.t1.exon1;Parent=MS.gene050133.t1 |
chr4.2 | CDS | 44220071 | 44220377 | 44220071 | ID=cds.MS.gene050133.t1;Parent=MS.gene050133.t1 |
chr4.2 | exon | 44220956 | 44221251 | 44220956 | ID=MS.gene050133.t1.exon2;Parent=MS.gene050133.t1 |
chr4.2 | CDS | 44220956 | 44221251 | 44220956 | ID=cds.MS.gene050133.t1;Parent=MS.gene050133.t1 |
chr4.2 | exon | 44221355 | 44221495 | 44221355 | ID=MS.gene050133.t1.exon3;Parent=MS.gene050133.t1 |
chr4.2 | CDS | 44221355 | 44221495 | 44221355 | ID=cds.MS.gene050133.t1;Parent=MS.gene050133.t1 |
chr4.2 | exon | 44222090 | 44222203 | 44222090 | ID=MS.gene050133.t1.exon4;Parent=MS.gene050133.t1 |
chr4.2 | CDS | 44222090 | 44222203 | 44222090 | ID=cds.MS.gene050133.t1;Parent=MS.gene050133.t1 |
Gene Sequence |
Protein sequence |