Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06526.t1 | XP_013461517.1 | 98 | 591 | 12 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1151.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06526.t1 | Q501D5 | 58.0 | 598 | 236 | 9 | 1 | 592 | 1 | 589 | 4.0e-187 | 656.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06526.t1 | A0A072V141 | 98.0 | 591 | 12 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1151.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene06526 | 0.94662 | 3.26E-105 | -1.69E-46 |
MS.gene049989 | MS.gene06526 | 0.87482 | 5.01E-68 | -1.69E-46 |
MS.gene050297 | MS.gene06526 | 0.864892 | 8.77E-65 | -1.69E-46 |
MS.gene05054 | MS.gene06526 | 0.806002 | 1.02E-49 | -1.69E-46 |
MS.gene050648 | MS.gene06526 | 0.810214 | 1.29E-50 | -1.69E-46 |
MS.gene051067 | MS.gene06526 | 0.815217 | 1.04E-51 | -1.69E-46 |
MS.gene051087 | MS.gene06526 | 0.810787 | 9.69E-51 | -1.69E-46 |
MS.gene051094 | MS.gene06526 | 0.81505 | 1.13E-51 | -1.69E-46 |
MS.gene052367 | MS.gene06526 | 0.830865 | 2.31E-55 | -1.69E-46 |
MS.gene053416 | MS.gene06526 | 0.829185 | 5.93E-55 | -1.69E-46 |
MS.gene053417 | MS.gene06526 | 0.827609 | 1.42E-54 | -1.69E-46 |
MS.gene055411 | MS.gene06526 | 0.801415 | 9.10E-49 | -1.69E-46 |
MS.gene055957 | MS.gene06526 | 0.821694 | 3.52E-53 | -1.69E-46 |
MS.gene056041 | MS.gene06526 | 0.837048 | 6.54E-57 | -1.69E-46 |
MS.gene056526 | MS.gene06526 | 0.81987 | 9.26E-53 | -1.69E-46 |
MS.gene058196 | MS.gene06526 | 0.816018 | 6.86E-52 | -1.69E-46 |
MS.gene058197 | MS.gene06526 | 0.809755 | 1.62E-50 | -1.69E-46 |
MS.gene058198 | MS.gene06526 | 0.811673 | 6.22E-51 | -1.69E-46 |
MS.gene059300 | MS.gene06526 | 0.847144 | 1.39E-59 | -1.69E-46 |
MS.gene060473 | MS.gene06526 | 0.844524 | 7.17E-59 | -1.69E-46 |
MS.gene060565 | MS.gene06526 | 0.852111 | 5.72E-61 | -1.69E-46 |
MS.gene06057 | MS.gene06526 | 0.845121 | 4.95E-59 | -1.69E-46 |
MS.gene061260 | MS.gene06526 | 0.858545 | 7.65E-63 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06526 | MS.gene58234 | PPI |
MS.gene06526 | MS.gene57751 | PPI |
MS.gene06526 | MS.gene58754 | PPI |
MS.gene041425 | MS.gene06526 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06526.t1 | MTR_3g094070 | 97.970 | 591 | 12 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1202 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06526.t1 | AT2G40550 | 58.027 | 598 | 236 | 9 | 1 | 592 | 1 | 589 | 0.0 | 689 |
Find 158 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTGACCAAGTCAGGTTT+TGG | 0.243841 | 3.2:+78847853 | None:intergenic |
GCTCTGCTGATACGCCTATT+TGG | 0.255149 | 3.2:-78849741 | MS.gene06526:CDS |
TCGGTTTCGTGGAATGATTC+AGG | 0.295728 | 3.2:-78849957 | MS.gene06526:CDS |
AGACATCTCTCAGCTGTTCT+AGG | 0.298551 | 3.2:-78847811 | MS.gene06526:CDS |
CTCTGCTGATACGCCTATTT+GGG | 0.305209 | 3.2:-78849740 | MS.gene06526:CDS |
TTCCCCTGCCTCTCAGTCTC+AGG | 0.325781 | 3.2:-78848603 | MS.gene06526:CDS |
CTGATGCCTTTGACCAAGTC+AGG | 0.332760 | 3.2:+78847847 | None:intergenic |
CTTCTTTAAACAACCGCGAC+TGG | 0.333640 | 3.2:-78850192 | MS.gene06526:CDS |
CGCCTCATGTGTTTAAGCTT+TGG | 0.337640 | 3.2:-78846138 | MS.gene06526:CDS |
AGTGATTTATCAAATGGATT+TGG | 0.344039 | 3.2:-78848271 | MS.gene06526:CDS |
TACATCTGATCCAGAGCTTC+AGG | 0.346600 | 3.2:-78848308 | MS.gene06526:CDS |
AAAAGAATTATGATACAAAT+AGG | 0.355812 | 3.2:-78847385 | MS.gene06526:intron |
TCACCAACCTGCTTAAATCT+TGG | 0.359173 | 3.2:+78846258 | None:intergenic |
GTTGTTTATGCATAGGTTCC+GGG | 0.372858 | 3.2:-78849508 | MS.gene06526:intron |
GAGATTGCTTTACTGTGTTC+CGG | 0.373047 | 3.2:-78849713 | MS.gene06526:intron |
CGAAACCGAACAAGAGTATT+GGG | 0.374415 | 3.2:+78849971 | None:intergenic |
GTGGAGGACCAATAAATTTA+CGG | 0.375012 | 3.2:-78849794 | MS.gene06526:CDS |
TTGGCAAATGACCAAGGAAT+TGG | 0.375411 | 3.2:-78846091 | MS.gene06526:CDS |
GAAGATAGTGATTTATCAAA+TGG | 0.389010 | 3.2:-78848277 | MS.gene06526:CDS |
AATACTCTTGTTCGGTTTCG+TGG | 0.391919 | 3.2:-78849968 | MS.gene06526:CDS |
AGCAGTTGGCAATCCATCTA+TGG | 0.394157 | 3.2:-78849455 | MS.gene06526:CDS |
AAGCAGAAGCTTTGGAAGCT+TGG | 0.402078 | 3.2:-78846804 | MS.gene06526:CDS |
AGCTGTGGAAGCAGAAGCTT+TGG | 0.407257 | 3.2:-78846812 | MS.gene06526:CDS |
AGCAATCTCCGTTCCCAAAT+AGG | 0.409820 | 3.2:+78849727 | None:intergenic |
GCCTTCTGCAACCATTTGCT+TGG | 0.413431 | 3.2:-78846836 | MS.gene06526:CDS |
TGAGTGGGTACCTCTATCAT+AGG | 0.419368 | 3.2:+78847989 | None:intergenic |
TCACAGGAAACTTTCAGTTC+AGG | 0.423033 | 3.2:-78848029 | MS.gene06526:CDS |
GGGATCGGAACCGGTGGCTA+TGG | 0.427343 | 3.2:+78850216 | None:intergenic |
TTCTTTAAACAACCGCGACT+GGG | 0.428429 | 3.2:-78850191 | MS.gene06526:CDS |
CACCAACCTGCTTAAATCTT+GGG | 0.428915 | 3.2:+78846259 | None:intergenic |
TTTGCCAATGTTCTAGTGAC+AGG | 0.430670 | 3.2:+78846106 | None:intergenic |
CTGACTTGGTCAAAGGCATC+AGG | 0.431219 | 3.2:-78847846 | MS.gene06526:CDS |
TTGCCAACTGCTTCTGCTGA+AGG | 0.443463 | 3.2:+78849466 | None:intergenic |
TGAAACCCAATACTCTTGTT+CGG | 0.443856 | 3.2:-78849976 | MS.gene06526:CDS |
AGTTTATTGTCTGGTCTCAA+TGG | 0.449278 | 3.2:-78848548 | MS.gene06526:CDS |
TTCCACAGCTTCCAAGCAAA+TGG | 0.452550 | 3.2:+78846825 | None:intergenic |
AGCAAAGAAACCGCGTCTAT+CGG | 0.458757 | 3.2:-78847503 | MS.gene06526:CDS |
CAATGCTCCAGATTAGAAAC+TGG | 0.460957 | 3.2:-78847280 | MS.gene06526:intron |
CAAGTACTACAAGATGGAAA+TGG | 0.463233 | 3.2:-78846935 | MS.gene06526:CDS |
ATGAATCATACCTTGTCAGC+TGG | 0.467749 | 3.2:+78848226 | None:intergenic |
TGTTCAAGTATTCCACTGTA+AGG | 0.468020 | 3.2:+78847426 | None:intergenic |
TCGTTGTCCTCCTGAAGCTC+TGG | 0.471222 | 3.2:+78848298 | None:intergenic |
TTCAGCTTCAGTTCAGACTC+TGG | 0.472343 | 3.2:+78848358 | None:intergenic |
CTCATCTAGTTGTATTGTAA+AGG | 0.476614 | 3.2:-78848522 | MS.gene06526:intron |
CTGATGTAATTGTACCTATC+CGG | 0.478429 | 3.2:-78846858 | MS.gene06526:CDS |
GATGTGATTGGTCGGAGAGA+AGG | 0.479336 | 3.2:+78850146 | None:intergenic |
TAAAGAAGTGGGATCGGAAC+CGG | 0.480096 | 3.2:+78850207 | None:intergenic |
CTTACAGCCAAAACCTGACT+TGG | 0.482514 | 3.2:-78847860 | MS.gene06526:intron |
GCGGAGTCTCTCCAATTCCT+TGG | 0.483490 | 3.2:+78846080 | None:intergenic |
GCTCCCTGAGACTGAGAGGC+AGG | 0.483876 | 3.2:+78848599 | None:intergenic |
TGAATACCCAAGATTTAAGC+AGG | 0.484782 | 3.2:-78846265 | MS.gene06526:intron |
GGGTTTCACGTATCTGATAG+TGG | 0.486104 | 3.2:+78849991 | None:intergenic |
TCTAGTATGAGTTTATTGTC+TGG | 0.486602 | 3.2:-78848557 | MS.gene06526:CDS |
GGCTATGGCGGCGTCGAAGG+TGG | 0.487183 | 3.2:+78850231 | None:intergenic |
ATACTAGAGCCAGCGATCTC+AGG | 0.490063 | 3.2:+78848572 | None:intergenic |
ACGAAACCGAACAAGAGTAT+TGG | 0.490164 | 3.2:+78849970 | None:intergenic |
CGACCAATCACATCTCTCTC+AGG | 0.491453 | 3.2:-78850137 | MS.gene06526:intron |
AAATGTAATGGAGTTGCAAA+AGG | 0.494363 | 3.2:-78847155 | MS.gene06526:intron |
TCAGATGTCCAATCCATAGA+TGG | 0.495292 | 3.2:+78849442 | None:intergenic |
CTGAACAGATTGGTAACAAT+GGG | 0.496519 | 3.2:-78846162 | MS.gene06526:intron |
AGCAAATGGTTGCAGAAGGC+CGG | 0.497324 | 3.2:+78846839 | None:intergenic |
GTCGCGGTTGTTTAAAGAAG+TGG | 0.500107 | 3.2:+78850195 | None:intergenic |
CAGAAGCTTTGGAAGCTTGG+AGG | 0.501052 | 3.2:-78846801 | MS.gene06526:CDS |
GGTGGCTATGGCGGCGTCGA+AGG | 0.503625 | 3.2:+78850228 | None:intergenic |
TTCTCCTAATACTAAAAGAA+TGG | 0.508460 | 3.2:-78849155 | MS.gene06526:intron |
TCCCCTGCCTCTCAGTCTCA+GGG | 0.509872 | 3.2:-78848602 | MS.gene06526:CDS |
TTGGCAATCCATCTATGGAT+TGG | 0.510275 | 3.2:-78849450 | MS.gene06526:CDS |
ATAGGTACAATTACATCAGC+TGG | 0.512462 | 3.2:+78846862 | None:intergenic |
TCAGAATAAGCCTATGATAG+AGG | 0.514223 | 3.2:-78847999 | MS.gene06526:intron |
TTCACGTATCTGATAGTGGC+TGG | 0.515371 | 3.2:+78849995 | None:intergenic |
ATGTATATTGAAGGATGGTT+CGG | 0.516199 | 3.2:-78849818 | MS.gene06526:intron |
CAAAGAGAAAAGAGGAGGAG+AGG | 0.518617 | 3.2:-78849418 | MS.gene06526:CDS |
TGAATCATACCTTGTCAGCT+GGG | 0.518687 | 3.2:+78848227 | None:intergenic |
GTTGAGGGTGATGAGGTTGA+AGG | 0.521584 | 3.2:-78849178 | MS.gene06526:CDS |
TCCTGTGAATAAAACAATGA+AGG | 0.523148 | 3.2:+78848044 | None:intergenic |
GAAGCTCTGGATCAGATGTA+AGG | 0.525588 | 3.2:+78848311 | None:intergenic |
GTTCAAGTATTCCACTGTAA+GGG | 0.527633 | 3.2:+78847427 | None:intergenic |
AGGGTAGATGCTCTTGCTGT+GGG | 0.529218 | 3.2:-78847554 | MS.gene06526:CDS |
GTATCAGCAGAGCAACCGAC+AGG | 0.531241 | 3.2:+78849751 | None:intergenic |
TTGCCGCAATACAAGCAGAT+AGG | 0.532247 | 3.2:-78846292 | MS.gene06526:CDS |
ATCGGAACCGGTGGCTATGG+CGG | 0.532256 | 3.2:+78850219 | None:intergenic |
AACCATTTGCTTGGAAGCTG+TGG | 0.536958 | 3.2:-78846827 | MS.gene06526:CDS |
GATGAGACACAATTAAAAGC+TGG | 0.537791 | 3.2:-78847220 | MS.gene06526:CDS |
AGGTTCCGGGACTGAATTCG+TGG | 0.538507 | 3.2:-78849495 | MS.gene06526:CDS |
AACTCACGATTCACGATGGT+GGG | 0.539632 | 3.2:-78850298 | None:intergenic |
TCCCTGAGACTGAGAGGCAG+GGG | 0.541900 | 3.2:+78848601 | None:intergenic |
CCACCCTGTCACTAGAACAT+TGG | 0.543609 | 3.2:-78846110 | MS.gene06526:CDS |
TTTATTTATTCACAGGTTGA+GGG | 0.544096 | 3.2:-78849193 | MS.gene06526:intron |
CCAAAACCTGACTTGGTCAA+AGG | 0.549483 | 3.2:-78847853 | MS.gene06526:CDS |
AGCTGGAACTCTCAATTCTG+TGG | 0.552721 | 3.2:-78847203 | MS.gene06526:CDS |
CTCCCTGAGACTGAGAGGCA+GGG | 0.556116 | 3.2:+78848600 | None:intergenic |
ATGGTTGCAGAAGGCCGGAT+AGG | 0.556436 | 3.2:+78846844 | None:intergenic |
AAGCTTTGGAAGCTTGGAGG+TGG | 0.559758 | 3.2:-78846798 | MS.gene06526:CDS |
CTATCATAGGCTTATTCTGA+AGG | 0.563882 | 3.2:+78848002 | None:intergenic |
TTACCTGAGAGAGATGTGAT+TGG | 0.564128 | 3.2:+78850134 | None:intergenic |
TTCACAGGTTGAGGGTGATG+AGG | 0.566027 | 3.2:-78849185 | MS.gene06526:intron |
TGAAGGATGGTTCGGTGTGG+AGG | 0.566388 | 3.2:-78849810 | MS.gene06526:intron |
TCTCAACATTCCATCCCTGT+CGG | 0.566421 | 3.2:-78849766 | MS.gene06526:CDS |
TCTGCCCACGAATTCAGTCC+CGG | 0.568498 | 3.2:+78849490 | None:intergenic |
CAGGGTAGATGCTCTTGCTG+TGG | 0.570066 | 3.2:-78847555 | MS.gene06526:CDS |
GCTGGAACTCTCAATTCTGT+GGG | 0.571225 | 3.2:-78847202 | MS.gene06526:CDS |
TGGCGAGGAGATCGTACTGT+GGG | 0.571872 | 3.2:+78850275 | None:intergenic |
GCACAAGGTTCTTGACAGCA+TGG | 0.575018 | 3.2:+78847468 | None:intergenic |
TCTGAACAGATTGGTAACAA+TGG | 0.575926 | 3.2:-78846163 | MS.gene06526:intron |
CCGCACCGAGTGGGTTGGCG+AGG | 0.576164 | 3.2:+78850260 | None:intergenic |
TCGCGGTTGTTTAAAGAAGT+GGG | 0.576680 | 3.2:+78850196 | None:intergenic |
GAACCTTCAGCAGAAGCAGT+TGG | 0.578192 | 3.2:-78849469 | MS.gene06526:CDS |
TGGAGAGACTCCGCAGAGAG+AGG | 0.581928 | 3.2:-78846071 | MS.gene06526:CDS |
TACAGCTCCCTGAGACTGAG+AGG | 0.582470 | 3.2:+78848595 | None:intergenic |
GATCTCCTCGCCAACCCACT+CGG | 0.583364 | 3.2:-78850265 | MS.gene06526:CDS |
AAGAACAGCATACCTTGGAT+AGG | 0.585323 | 3.2:+78847749 | None:intergenic |
GTCAGCTGGGAAATGATGCA+AGG | 0.588207 | 3.2:+78848240 | None:intergenic |
TGATTTCAAGTACTACAAGA+TGG | 0.589781 | 3.2:-78846941 | MS.gene06526:CDS |
TTCAAGTATTCCACTGTAAG+GGG | 0.590418 | 3.2:+78847428 | None:intergenic |
TTCGACGCCGCCATAGCCAC+CGG | 0.590506 | 3.2:-78850226 | MS.gene06526:CDS |
AGCAGAGCAACCGACAGGGA+TGG | 0.590945 | 3.2:+78849756 | None:intergenic |
GGAATGATTCAGGATATGCT+TGG | 0.591067 | 3.2:-78849947 | MS.gene06526:CDS |
CTGATACGCCTATTTGGGAA+CGG | 0.595457 | 3.2:-78849735 | MS.gene06526:CDS |
ACTCCTATCTGCTTGTATTG+CGG | 0.595846 | 3.2:+78846289 | None:intergenic |
CCTCAGACAAAACTAACAGT+TGG | 0.597317 | 3.2:+78846902 | None:intergenic |
GTTGTTTAAAGAAGTGGGAT+CGG | 0.598531 | 3.2:+78850201 | None:intergenic |
CTGAGAGAGATGTGATTGGT+CGG | 0.599783 | 3.2:+78850138 | None:intergenic |
GATCGATGACGCCCCAGTCG+CGG | 0.601677 | 3.2:+78850179 | None:intergenic |
TCCAAGCAAATGGTTGCAGA+AGG | 0.602079 | 3.2:+78846835 | None:intergenic |
TCTGACCGCACCGAGTGGGT+TGG | 0.603273 | 3.2:+78850255 | None:intergenic |
TCTTTAAACAACCGCGACTG+GGG | 0.604525 | 3.2:-78850190 | MS.gene06526:CDS |
GCATCATTTCCCAGCTGACA+AGG | 0.607337 | 3.2:-78848236 | MS.gene06526:intron |
AGGGGTATGCAATGTGTGAA+AGG | 0.607645 | 3.2:+78847446 | None:intergenic |
GTTGCTGCATCTCCTATCCA+AGG | 0.611677 | 3.2:-78847761 | MS.gene06526:intron |
TTGCCAATGTTCTAGTGACA+GGG | 0.613980 | 3.2:+78846107 | None:intergenic |
TCAGCTGGGAAATGATGCAA+GGG | 0.615707 | 3.2:+78848241 | None:intergenic |
GGAGCTGTACCTGAGATCGC+TGG | 0.616055 | 3.2:-78848581 | MS.gene06526:CDS |
TGACTTGGTCAAAGGCATCA+GGG | 0.616560 | 3.2:-78847845 | MS.gene06526:CDS |
CACAGCAAGAGCATCTACCC+TGG | 0.619097 | 3.2:+78847556 | None:intergenic |
CTGAGCAAAGAGAAAAGAGG+AGG | 0.626217 | 3.2:-78849423 | MS.gene06526:CDS |
TTCACTTTAACCTCTCTCTG+CGG | 0.632262 | 3.2:+78846061 | None:intergenic |
TGGATCTGACCGCACCGAGT+GGG | 0.633931 | 3.2:+78850251 | None:intergenic |
GGGTAGATGCTCTTGCTGTG+GGG | 0.634455 | 3.2:-78847553 | MS.gene06526:CDS |
GGTGTCTTGCAACTAGCTGA+AGG | 0.634721 | 3.2:-78847259 | MS.gene06526:CDS |
TGCAATGTGTGAAAGGCACA+AGG | 0.637195 | 3.2:+78847453 | None:intergenic |
ATTGGTCGGAGAGAAGGTTG+CGG | 0.638343 | 3.2:+78850152 | None:intergenic |
TTGGCGAGGAGATCGTACTG+TGG | 0.638733 | 3.2:+78850274 | None:intergenic |
AGAAGTGGGATCGGAACCGG+TGG | 0.644638 | 3.2:+78850210 | None:intergenic |
CCTCGCCAACCCACTCGGTG+CGG | 0.644714 | 3.2:-78850260 | MS.gene06526:CDS |
TGAATAAAACAATGAAGGCG+TGG | 0.644813 | 3.2:+78848049 | None:intergenic |
CTGTGGGTGTAGAGAATGCA+AGG | 0.645939 | 3.2:-78847186 | MS.gene06526:CDS |
GTTTCTGATTCAAAAGAGTG+TGG | 0.646460 | 3.2:+78846751 | None:intergenic |
CATCTGAGCAAAGAGAAAAG+AGG | 0.648196 | 3.2:-78849426 | MS.gene06526:CDS |
CACCAAAGCTTAAACACATG+AGG | 0.649903 | 3.2:+78846136 | None:intergenic |
CCAATGTTCTAGTGACAGGG+TGG | 0.654124 | 3.2:+78846110 | None:intergenic |
AGAACATTGGCAAATGACCA+AGG | 0.660030 | 3.2:-78846097 | MS.gene06526:CDS |
ATCTGATCCAGAGCTTCAGG+AGG | 0.667439 | 3.2:-78848305 | MS.gene06526:CDS |
ATAGTGGCTGGTGTGAGAAG+CGG | 0.674090 | 3.2:+78850007 | None:intergenic |
GTGGATCTGACCGCACCGAG+TGG | 0.677758 | 3.2:+78850250 | None:intergenic |
GGTTCCGGGACTGAATTCGT+GGG | 0.683130 | 3.2:-78849494 | MS.gene06526:CDS |
ACATTGCATACCCCTTACAG+TGG | 0.700005 | 3.2:-78847438 | MS.gene06526:CDS |
TATCAGCAGAGCAACCGACA+GGG | 0.700346 | 3.2:+78849752 | None:intergenic |
TATTGAAGGATGGTTCGGTG+TGG | 0.711545 | 3.2:-78849813 | MS.gene06526:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGAATTATGATACAAAT+AGG | - | chr3.2:78848960-78848979 | MS.gene06526:intron | 15.0% |
!! | AATGATTTCATAAATAAAAC+TGG | + | chr3.2:78847447-78847466 | None:intergenic | 15.0% |
!! | AATTAAATTCATAACACAAT+TGG | + | chr3.2:78847238-78847257 | None:intergenic | 15.0% |
!! | AGATACTAATATATTATTCT+AGG | + | chr3.2:78847277-78847296 | None:intergenic | 15.0% |
!! | TAGAGTTTAACTAATAATTA+GGG | + | chr3.2:78846288-78846307 | None:intergenic | 15.0% |
!! | TTAGAGTTTAACTAATAATT+AGG | + | chr3.2:78846289-78846308 | None:intergenic | 15.0% |
!!! | ATGTTTCTTTCATATATTTT+AGG | - | chr3.2:78846701-78846720 | MS.gene06526:intron | 15.0% |
!!! | TGTTTCTTTCATATATTTTA+GGG | - | chr3.2:78846702-78846721 | MS.gene06526:intron | 15.0% |
!!! | TTAACTTGTTTTTAATTTCA+TGG | - | chr3.2:78847904-78847923 | MS.gene06526:intron | 15.0% |
!!! | TTCAAAAATAGAGTTAATTT+TGG | - | chr3.2:78846496-78846515 | MS.gene06526:intron | 15.0% |
!!! | TTTAGATTTGTTAGAAATTA+TGG | - | chr3.2:78847301-78847320 | MS.gene06526:intron | 15.0% |
!!! | TTTAGTATTCTATTTAGTTT+AGG | - | chr3.2:78847476-78847495 | MS.gene06526:CDS | 15.0% |
!!! | TTTGTATCATAATTCTTTTT+TGG | + | chr3.2:78848959-78848978 | None:intergenic | 15.0% |
!! | AATGACATTTATTTATTCAC+AGG | - | chr3.2:78847145-78847164 | MS.gene06526:intron | 20.0% |
!! | AGAAAAATCCGTAAATTTAT+TGG | + | chr3.2:78846562-78846581 | None:intergenic | 20.0% |
!! | ATAAAACTGGTAAACTAAAT+AGG | + | chr3.2:78847434-78847453 | None:intergenic | 20.0% |
!! | ATGTACTTTCATTACTAAAT+TGG | - | chr3.2:78846741-78846760 | MS.gene06526:intron | 20.0% |
!! | ATTATGGATAACAAATATCT+TGG | + | chr3.2:78847378-78847397 | None:intergenic | 20.0% |
!! | GATGTATTCATTAAGAAAAA+TGG | + | chr3.2:78849948-78849967 | None:intergenic | 20.0% |
!! | GTGTTTACAAATAATAATGA+TGG | + | chr3.2:78849926-78849945 | None:intergenic | 20.0% |
!! | TAAAACTGGTAAACTAAATA+GGG | + | chr3.2:78847433-78847452 | None:intergenic | 20.0% |
!! | TGTAAACAATCAATAGAAAA+TGG | + | chr3.2:78849333-78849352 | None:intergenic | 20.0% |
!!! | TATTCTGTTCTTTTAAGAAT+TGG | - | chr3.2:78847684-78847703 | MS.gene06526:intron | 20.0% |
! | AACCTAATGAAGCATAATTA+GGG | + | chr3.2:78846318-78846337 | None:intergenic | 25.0% |
! | AACTGACTAATTTCAAAGTT+GGG | - | chr3.2:78849734-78849753 | MS.gene06526:CDS | 25.0% |
! | AGTATTTCCAATATATTCCT+GGG | - | chr3.2:78849840-78849859 | MS.gene06526:intron | 25.0% |
! | ATGAATAAATCCATTTGAGT+GGG | + | chr3.2:78848374-78848393 | None:intergenic | 25.0% |
! | ATTACAAACATTCTCAAGAA+TGG | + | chr3.2:78848738-78848757 | None:intergenic | 25.0% |
! | ATTACTAAATTGGAAAGAGA+TGG | - | chr3.2:78846751-78846770 | MS.gene06526:CDS | 25.0% |
! | ATTGAATAATAGTGTTTCCA+AGG | - | chr3.2:78846807-78846826 | MS.gene06526:CDS | 25.0% |
! | ATTTAGTCTCATCATTGTTT+AGG | - | chr3.2:78847850-78847869 | MS.gene06526:CDS | 25.0% |
! | ATTTATTTATTCACAGGTTG+AGG | - | chr3.2:78847151-78847170 | MS.gene06526:intron | 25.0% |
! | CAAAGTTAATGACAAACATT+TGG | - | chr3.2:78849361-78849380 | MS.gene06526:intron | 25.0% |
! | CATGTTAAAACTTATAAACC+AGG | + | chr3.2:78848243-78848262 | None:intergenic | 25.0% |
! | GAAGATAGTGATTTATCAAA+TGG | - | chr3.2:78848068-78848087 | MS.gene06526:intron | 25.0% |
! | GTAACCTAAAAATCTTTAAC+TGG | + | chr3.2:78849685-78849704 | None:intergenic | 25.0% |
! | GTCTATGGACATAAAAATTA+TGG | + | chr3.2:78847394-78847413 | None:intergenic | 25.0% |
! | GTGTTATGAATTTAATTGAC+TGG | - | chr3.2:78847241-78847260 | MS.gene06526:CDS | 25.0% |
! | GTTATGTCAATGTATATTGA+AGG | - | chr3.2:78846518-78846537 | MS.gene06526:intron | 25.0% |
! | TACTAAAAGAATGGTATGAA+TGG | - | chr3.2:78847199-78847218 | MS.gene06526:CDS | 25.0% |
! | TAGTATTTCCAATATATTCC+TGG | - | chr3.2:78849839-78849858 | MS.gene06526:intron | 25.0% |
! | TCATAAACTAAGGTTGTTTA+AGG | - | chr3.2:78849649-78849668 | MS.gene06526:intron | 25.0% |
! | TCTTAAAAGAACAGAATAGA+AGG | + | chr3.2:78847682-78847701 | None:intergenic | 25.0% |
! | TCTTGAGAATGTTTGTAATA+AGG | - | chr3.2:78848739-78848758 | MS.gene06526:intron | 25.0% |
! | TTCTCCTAATACTAAAAGAA+TGG | - | chr3.2:78847190-78847209 | MS.gene06526:CDS | 25.0% |
! | TTTAACAGTTGTTTATGCAT+AGG | - | chr3.2:78846830-78846849 | MS.gene06526:CDS | 25.0% |
!! | AACTACTTGAGTTTGATAAT+TGG | - | chr3.2:78847651-78847670 | MS.gene06526:intron | 25.0% |
!! | AGTGATTTATCAAATGGATT+TGG | - | chr3.2:78848074-78848093 | MS.gene06526:intron | 25.0% |
!! | CATACCATTCTTTTAGTATT+AGG | + | chr3.2:78847197-78847216 | None:intergenic | 25.0% |
!! | CTTGGAAATGAATTTTATGT+TGG | - | chr3.2:78846416-78846435 | MS.gene06526:intron | 25.0% |
!! | GTAACAGTTTTCATAAACTA+AGG | - | chr3.2:78849639-78849658 | MS.gene06526:intron | 25.0% |
!! | TGAACCAGTTAAAGATTTTT+AGG | - | chr3.2:78849678-78849697 | MS.gene06526:intron | 25.0% |
!! | TTTATTTATTCACAGGTTGA+GGG | - | chr3.2:78847152-78847171 | MS.gene06526:intron | 25.0% |
!!! | AATGACATTTTTGAGTTTGT+GGG | - | chr3.2:78848008-78848027 | MS.gene06526:CDS | 25.0% |
AAACATTTGGTATGTGTTTC+AGG | - | chr3.2:78849374-78849393 | MS.gene06526:intron | 30.0% | |
AACCCTAATTATGCTTCATT+AGG | - | chr3.2:78846313-78846332 | MS.gene06526:CDS | 30.0% | |
AAGGTTGCTGAAAAATGTAA+TGG | - | chr3.2:78849178-78849197 | MS.gene06526:CDS | 30.0% | |
AATGCATAAATCACATGTGT+AGG | + | chr3.2:78848699-78848718 | None:intergenic | 30.0% | |
AATTATTCACATTTCTCTCG+AGG | + | chr3.2:78847029-78847048 | None:intergenic | 30.0% | |
ACAAGGAATGAACTCAATTA+AGG | + | chr3.2:78846997-78847016 | None:intergenic | 30.0% | |
AGTTAAATGTGCGTAATAGT+TGG | - | chr3.2:78847588-78847607 | MS.gene06526:intron | 30.0% | |
ATAAACTGGAAAAATACCAC+TGG | + | chr3.2:78847567-78847586 | None:intergenic | 30.0% | |
ATGTATATTGAAGGATGGTT+CGG | - | chr3.2:78846527-78846546 | MS.gene06526:intron | 30.0% | |
ATTCATAACACAATTGGAGT+TGG | + | chr3.2:78847232-78847251 | None:intergenic | 30.0% | |
CAAGGAATGAACTCAATTAA+GGG | + | chr3.2:78846996-78847015 | None:intergenic | 30.0% | |
CAATGCTTGAAAAGATAGAA+AGG | + | chr3.2:78848633-78848652 | None:intergenic | 30.0% | |
CATAAACAACTGTTAAACCT+TGG | + | chr3.2:78846827-78846846 | None:intergenic | 30.0% | |
CTCATCTAGTTGTATTGTAA+AGG | - | chr3.2:78847823-78847842 | MS.gene06526:CDS | 30.0% | |
GAAAGAGATGGATAATTTAG+TGG | - | chr3.2:78846763-78846782 | MS.gene06526:CDS | 30.0% | |
GAACCTAATGAAGCATAATT+AGG | + | chr3.2:78846319-78846338 | None:intergenic | 30.0% | |
GAACTGACTAATTTCAAAGT+TGG | - | chr3.2:78849733-78849752 | MS.gene06526:CDS | 30.0% | |
GATGAATAAATCCATTTGAG+TGG | + | chr3.2:78848375-78848394 | None:intergenic | 30.0% | |
GGATAACAAATATCTTGGTT+TGG | + | chr3.2:78847373-78847392 | None:intergenic | 30.0% | |
TCCTGTGAATAAAACAATGA+AGG | + | chr3.2:78848304-78848323 | None:intergenic | 30.0% | |
TCTAGTATGAGTTTATTGTC+TGG | - | chr3.2:78847788-78847807 | MS.gene06526:CDS | 30.0% | |
TGAAATCCAACAAAATGACT+TGG | + | chr3.2:78847062-78847081 | None:intergenic | 30.0% | |
TGTCAATGTATATTGAAGGA+TGG | - | chr3.2:78846522-78846541 | MS.gene06526:intron | 30.0% | |
TTCATAACACAATTGGAGTT+GGG | + | chr3.2:78847231-78847250 | None:intergenic | 30.0% | |
! | AAATGTAATGGAGTTGCAAA+AGG | - | chr3.2:78849190-78849209 | MS.gene06526:intron | 30.0% |
! | ATTTTATGTTGGCGCTTTTA+AGG | - | chr3.2:78846427-78846446 | MS.gene06526:intron | 30.0% |
! | CGCACATTTAACTTATAAAC+TGG | + | chr3.2:78847581-78847600 | None:intergenic | 30.0% |
! | TCAAGCATTGTAAATGATCT+CGG | - | chr3.2:78848643-78848662 | MS.gene06526:intron | 30.0% |
! | TCTATTTAGTTTAGGAGTTC+TGG | - | chr3.2:78847484-78847503 | MS.gene06526:CDS | 30.0% |
! | TGATTTCAAGTACTACAAGA+TGG | - | chr3.2:78849404-78849423 | MS.gene06526:CDS | 30.0% |
!! | AACAAATATCTTGGTTTGGA+TGG | + | chr3.2:78847369-78847388 | None:intergenic | 30.0% |
!! | GTTTTAAGCTATGCATGTAT+AGG | + | chr3.2:78849804-78849823 | None:intergenic | 30.0% |
!! | TCAAGCATACTTAGTCTTTT+TGG | - | chr3.2:78849968-78849987 | MS.gene06526:CDS | 30.0% |
!!! | GAATGACATTTTTGAGTTTG+TGG | - | chr3.2:78848007-78848026 | MS.gene06526:CDS | 30.0% |
AACTAGAGAAATCAGCAAAG+AGG | + | chr3.2:78849903-78849922 | None:intergenic | 35.0% | |
AAGCACATGCTATCTTATCA+AGG | + | chr3.2:78848462-78848481 | None:intergenic | 35.0% | |
AATGAACTCAATTAAGGGCA+AGG | + | chr3.2:78846991-78847010 | None:intergenic | 35.0% | |
ACAAACATTCTCAAGAATGG+AGG | + | chr3.2:78848735-78848754 | None:intergenic | 35.0% | |
ACACAACCATCCAAAAAGAA+AGG | + | chr3.2:78849239-78849258 | None:intergenic | 35.0% | |
ACAGAGGAAAATGAGGAAAT+GGG | + | chr3.2:78847945-78847964 | None:intergenic | 35.0% | |
AGCAATTAGCGTCTTGAATT+GGG | - | chr3.2:78848415-78848434 | MS.gene06526:intron | 35.0% | |
AGTTGTTTATGCATAGGTTC+CGG | - | chr3.2:78846836-78846855 | MS.gene06526:CDS | 35.0% | |
AGTTTATTGTCTGGTCTCAA+TGG | - | chr3.2:78847797-78847816 | MS.gene06526:CDS | 35.0% | |
ATAAGCTCCCAGGAATATAT+TGG | + | chr3.2:78849850-78849869 | None:intergenic | 35.0% | |
ATAGGTACAATTACATCAGC+TGG | + | chr3.2:78849486-78849505 | None:intergenic | 35.0% | |
CAAACATTCTCAAGAATGGA+GGG | + | chr3.2:78848734-78848753 | None:intergenic | 35.0% | |
CAAGTACTACAAGATGGAAA+TGG | - | chr3.2:78849410-78849429 | MS.gene06526:CDS | 35.0% | |
CATTGATCAAGTATCCTCAA+GGG | + | chr3.2:78848145-78848164 | None:intergenic | 35.0% | |
CTATCATAGGCTTATTCTGA+AGG | + | chr3.2:78848346-78848365 | None:intergenic | 35.0% | |
CTATTAAGAACAGCATACCT+TGG | + | chr3.2:78848604-78848623 | None:intergenic | 35.0% | |
CTGATGTAATTGTACCTATC+CGG | - | chr3.2:78849487-78849506 | MS.gene06526:CDS | 35.0% | |
GAGTTTGTATGCTAAGAGTA+AGG | + | chr3.2:78849711-78849730 | None:intergenic | 35.0% | |
GATGAGACACAATTAAAAGC+TGG | - | chr3.2:78849125-78849144 | MS.gene06526:intron | 35.0% | |
GTGGAGGACCAATAAATTTA+CGG | - | chr3.2:78846551-78846570 | MS.gene06526:intron | 35.0% | |
GTTCAAGTATTCCACTGTAA+GGG | + | chr3.2:78848921-78848940 | None:intergenic | 35.0% | |
GTTGTTTAAAGAAGTGGGAT+CGG | + | chr3.2:78846147-78846166 | None:intergenic | 35.0% | |
GTTTCTGATTCAAAAGAGTG+TGG | + | chr3.2:78849597-78849616 | None:intergenic | 35.0% | |
TACAGAGGAAAATGAGGAAA+TGG | + | chr3.2:78847946-78847965 | None:intergenic | 35.0% | |
TACTCTTAGCATACAAACTC+AGG | - | chr3.2:78849711-78849730 | MS.gene06526:intron | 35.0% | |
TAGCAATTAGCGTCTTGAAT+TGG | - | chr3.2:78848414-78848433 | MS.gene06526:intron | 35.0% | |
TCAGAATAAGCCTATGATAG+AGG | - | chr3.2:78848346-78848365 | MS.gene06526:CDS | 35.0% | |
TCATTGATCAAGTATCCTCA+AGG | + | chr3.2:78848146-78848165 | None:intergenic | 35.0% | |
TGAAACCCAATACTCTTGTT+CGG | - | chr3.2:78846369-78846388 | MS.gene06526:intron | 35.0% | |
TGAATAAAACAATGAAGGCG+TGG | + | chr3.2:78848299-78848318 | None:intergenic | 35.0% | |
TGAATACCCAAGATTTAAGC+AGG | - | chr3.2:78850080-78850099 | MS.gene06526:intron | 35.0% | |
TGTTCAAGTATTCCACTGTA+AGG | + | chr3.2:78848922-78848941 | None:intergenic | 35.0% | |
TTATTACTACCTCCATGTGT+TGG | - | chr3.2:78847619-78847638 | MS.gene06526:intron | 35.0% | |
TTCAAGTATTCCACTGTAAG+GGG | + | chr3.2:78848920-78848939 | None:intergenic | 35.0% | |
! | AGCTTTCCTTTCTTTTTGGA+TGG | - | chr3.2:78849230-78849249 | MS.gene06526:intron | 35.0% |
! | ATAAGCCTTTGCACTGTTTT+GGG | - | chr3.2:78850003-78850022 | MS.gene06526:CDS | 35.0% |
! | CATTTTACCCTCTAAATTGC+AGG | - | chr3.2:78848271-78848290 | MS.gene06526:CDS | 35.0% |
! | CTGAACAGATTGGTAACAAT+GGG | - | chr3.2:78850183-78850202 | MS.gene06526:CDS | 35.0% |
! | GTACTGAATAACTGACTCAT+AGG | - | chr3.2:78847540-78847559 | MS.gene06526:CDS | 35.0% |
! | TATAAGCCTTTGCACTGTTT+TGG | - | chr3.2:78850002-78850021 | MS.gene06526:CDS | 35.0% |
! | TATGCATGTATAGGTTGAAG+TGG | + | chr3.2:78849795-78849814 | None:intergenic | 35.0% |
! | TATGGCTGATATTTTGCTCA+AGG | - | chr3.2:78847319-78847338 | MS.gene06526:intron | 35.0% |
! | TCTGAACAGATTGGTAACAA+TGG | - | chr3.2:78850182-78850201 | MS.gene06526:CDS | 35.0% |
! | TTTTGAATCAGAAACTCAGC+AGG | - | chr3.2:78849602-78849621 | MS.gene06526:intron | 35.0% |
!! | CCAACAAAATGACTTGGTAA+AGG | + | chr3.2:78847056-78847075 | None:intergenic | 35.0% |
!! | CCTTTACCAAGTCATTTTGT+TGG | - | chr3.2:78847053-78847072 | MS.gene06526:intron | 35.0% |
!! | CTCTTACTTTTACAGAGAGA+AGG | - | chr3.2:78847710-78847729 | MS.gene06526:intron | 35.0% |
!! | GCCTTCATTGTTTTATTCAC+AGG | - | chr3.2:78848300-78848319 | MS.gene06526:CDS | 35.0% |
!!! | AACTGTTAGTTTTGTCTGAG+GGG | - | chr3.2:78849445-78849464 | MS.gene06526:CDS | 35.0% |
!!! | CAACTGTTAGTTTTGTCTGA+GGG | - | chr3.2:78849444-78849463 | MS.gene06526:CDS | 35.0% |
!!! | GTCTAGCTTTCCTTTCTTTT+TGG | - | chr3.2:78849226-78849245 | MS.gene06526:intron | 35.0% |
AACAAAAGGTCAGGGAAGAA+AGG | + | chr3.2:78850151-78850170 | None:intergenic | 40.0% | |
AACATTAGAGCGACGAGAAA+TGG | + | chr3.2:78846666-78846685 | None:intergenic | 40.0% | |
AAGAACAGCATACCTTGGAT+AGG | + | chr3.2:78848599-78848618 | None:intergenic | 40.0% | |
AAGGGCAAGGAAGAAATTAC+AGG | + | chr3.2:78846978-78846997 | None:intergenic | 40.0% | |
AAGGTATGATTCATCCCTTG+AGG | - | chr3.2:78848128-78848147 | MS.gene06526:intron | 40.0% | |
AATACTCTTGTTCGGTTTCG+TGG | - | chr3.2:78846377-78846396 | MS.gene06526:intron | 40.0% | |
AATGCAAACTATAAGCTCCC+AGG | + | chr3.2:78849860-78849879 | None:intergenic | 40.0% | |
AGAACATTGGCAAATGACCA+AGG | - | chr3.2:78850248-78850267 | MS.gene06526:CDS | 40.0% | |
ATATACCTAGCATGGTACAG+AGG | + | chr3.2:78847961-78847980 | None:intergenic | 40.0% | |
ATGAATCATACCTTGTCAGC+TGG | + | chr3.2:78848122-78848141 | None:intergenic | 40.0% | |
ATTTCAAAGTTGGGCAGAAG+TGG | - | chr3.2:78849743-78849762 | MS.gene06526:CDS | 40.0% | |
CAAGACACCAGTTTCTAATC+TGG | + | chr3.2:78849075-78849094 | None:intergenic | 40.0% | |
CAATCTGTTCAGAGAAGGTA+GGG | + | chr3.2:78850175-78850194 | None:intergenic | 40.0% | |
CAATGCTCCAGATTAGAAAC+TGG | - | chr3.2:78849065-78849084 | MS.gene06526:intron | 40.0% | |
CACCAAAGCTTAAACACATG+AGG | + | chr3.2:78850212-78850231 | None:intergenic | 40.0% | |
CACCAACCTGCTTAAATCTT+GGG | + | chr3.2:78850089-78850108 | None:intergenic | 40.0% | |
CATCTGAGCAAAGAGAAAAG+AGG | - | chr3.2:78846919-78846938 | MS.gene06526:CDS | 40.0% | |
CATTTGGTATGTGTTTCAGG+TGG | - | chr3.2:78849377-78849396 | MS.gene06526:intron | 40.0% | |
CCTCAGACAAAACTAACAGT+TGG | + | chr3.2:78849446-78849465 | None:intergenic | 40.0% | |
CTAAATCACTTTCTACCACC+TGG | + | chr3.2:78850033-78850052 | None:intergenic | 40.0% | |
GAGATTGCTTTACTGTGTTC+CGG | - | chr3.2:78846632-78846651 | MS.gene06526:intron | 40.0% | |
GCATAAATCACATGTGTAGG+AGG | + | chr3.2:78848696-78848715 | None:intergenic | 40.0% | |
GGAATGATTCAGGATATGCT+TGG | - | chr3.2:78846398-78846417 | MS.gene06526:intron | 40.0% | |
GGGTTTGATGTGATTTGAAG+TGG | + | chr3.2:78846268-78846287 | None:intergenic | 40.0% | |
GTTACCAATCTGTTCAGAGA+AGG | + | chr3.2:78850180-78850199 | None:intergenic | 40.0% | |
GTTGTTTATGCATAGGTTCC+GGG | - | chr3.2:78846837-78846856 | MS.gene06526:CDS | 40.0% | |
TACCCAAGATTTAAGCAGGT+TGG | - | chr3.2:78850084-78850103 | MS.gene06526:intron | 40.0% | |
TCACAGGAAACTTTCAGTTC+AGG | - | chr3.2:78848316-78848335 | MS.gene06526:CDS | 40.0% | |
TCACCAACCTGCTTAAATCT+TGG | + | chr3.2:78850090-78850109 | None:intergenic | 40.0% | |
TCAGATGTCCAATCCATAGA+TGG | + | chr3.2:78846906-78846925 | None:intergenic | 40.0% | |
TCGCGGTTGTTTAAAGAAGT+GGG | + | chr3.2:78846152-78846171 | None:intergenic | 40.0% | |
TGAATCATACCTTGTCAGCT+GGG | + | chr3.2:78848121-78848140 | None:intergenic | 40.0% | |
TTACCTGAGAGAGATGTGAT+TGG | + | chr3.2:78846214-78846233 | None:intergenic | 40.0% | |
TTCTTTAAACAACCGCGACT+GGG | - | chr3.2:78846154-78846173 | MS.gene06526:CDS | 40.0% | |
TTGCCAATGTTCTAGTGACA+GGG | + | chr3.2:78850241-78850260 | None:intergenic | 40.0% | |
TTGGCAAATGACCAAGGAAT+TGG | - | chr3.2:78850254-78850273 | MS.gene06526:CDS | 40.0% | |
TTGGCAATCCATCTATGGAT+TGG | - | chr3.2:78846895-78846914 | MS.gene06526:CDS | 40.0% | |
TTGTATGCTAAGAGTAAGGC+AGG | + | chr3.2:78849707-78849726 | None:intergenic | 40.0% | |
TTTGCCAATGTTCTAGTGAC+AGG | + | chr3.2:78850242-78850261 | None:intergenic | 40.0% | |
! | ACGAAACCGAACAAGAGTAT+TGG | + | chr3.2:78846378-78846397 | None:intergenic | 40.0% |
! | ATTTTCCTCTGTACCATGCT+AGG | - | chr3.2:78847953-78847972 | MS.gene06526:intron | 40.0% |
!! | CGAAACCGAACAAGAGTATT+GGG | + | chr3.2:78846377-78846396 | None:intergenic | 40.0% |
!! | GTTTTGACGATTCCAACACA+TGG | + | chr3.2:78847634-78847653 | None:intergenic | 40.0% |
!! | TAGTTGTTTTCCGATAGACG+CGG | + | chr3.2:78848855-78848874 | None:intergenic | 40.0% |
!! | TTGGTTTGGATGGACTTGAT+TGG | + | chr3.2:78847359-78847378 | None:intergenic | 40.0% |
!!! | CCAACTGTTAGTTTTGTCTG+AGG | - | chr3.2:78849443-78849462 | MS.gene06526:CDS | 40.0% |
!!! | GGATTGATTTGCTTTTGACC+AGG | - | chr3.2:78848760-78848779 | MS.gene06526:intron | 40.0% |
!!! | TTGATTTGCTTTTGACCAGG+TGG | - | chr3.2:78848763-78848782 | MS.gene06526:intron | 40.0% |
AACCATTTGCTTGGAAGCTG+TGG | - | chr3.2:78849518-78849537 | MS.gene06526:intron | 45.0% | |
ACATTGCATACCCCTTACAG+TGG | - | chr3.2:78848907-78848926 | MS.gene06526:intron | 45.0% | |
AGACATCTCTCAGCTGTTCT+AGG | - | chr3.2:78848534-78848553 | MS.gene06526:CDS | 45.0% | |
AGAGAAGGTAGGGCAACAAA+AGG | + | chr3.2:78850165-78850184 | None:intergenic | 45.0% | |
AGCAAAGAAACCGCGTCTAT+CGG | - | chr3.2:78848842-78848861 | MS.gene06526:intron | 45.0% | |
AGCAATCTCCGTTCCCAAAT+AGG | + | chr3.2:78846621-78846640 | None:intergenic | 45.0% | |
AGCAGTTGGCAATCCATCTA+TGG | - | chr3.2:78846890-78846909 | MS.gene06526:CDS | 45.0% | |
AGCTGGAACTCTCAATTCTG+TGG | - | chr3.2:78849142-78849161 | MS.gene06526:intron | 45.0% | |
CAAAGAGAAAAGAGGAGGAG+AGG | - | chr3.2:78846927-78846946 | MS.gene06526:CDS | 45.0% | |
CCAATCTGTTCAGAGAAGGT+AGG | + | chr3.2:78850176-78850195 | None:intergenic | 45.0% | |
CCTACCTTCTCTGAACAGAT+TGG | - | chr3.2:78850173-78850192 | MS.gene06526:CDS | 45.0% | |
CGCCTCATGTGTTTAAGCTT+TGG | - | chr3.2:78850207-78850226 | MS.gene06526:CDS | 45.0% | |
CGTGGTACCTGCAATTTAGA+GGG | + | chr3.2:78848281-78848300 | None:intergenic | 45.0% | |
CTCTGCTGATACGCCTATTT+GGG | - | chr3.2:78846605-78846624 | MS.gene06526:intron | 45.0% | |
CTGAGAGAGATGTGATTGGT+CGG | + | chr3.2:78846210-78846229 | None:intergenic | 45.0% | |
CTGAGCAAAGAGAAAAGAGG+AGG | - | chr3.2:78846922-78846941 | MS.gene06526:CDS | 45.0% | |
CTGATACGCCTATTTGGGAA+CGG | - | chr3.2:78846610-78846629 | MS.gene06526:intron | 45.0% | |
CTTACAGCCAAAACCTGACT+TGG | - | chr3.2:78848485-78848504 | MS.gene06526:intron | 45.0% | |
CTTCTTTAAACAACCGCGAC+TGG | - | chr3.2:78846153-78846172 | MS.gene06526:CDS | 45.0% | |
GAACACCCAAAACAGTGCAA+AGG | + | chr3.2:78850011-78850030 | None:intergenic | 45.0% | |
GCATGGTACAGAGGAAAATG+AGG | + | chr3.2:78847952-78847971 | None:intergenic | 45.0% | |
GCTGGAACTCTCAATTCTGT+GGG | - | chr3.2:78849143-78849162 | MS.gene06526:intron | 45.0% | |
GGGTTTCACGTATCTGATAG+TGG | + | chr3.2:78846357-78846376 | None:intergenic | 45.0% | |
GGTGTGTCATATACCTAGCA+TGG | + | chr3.2:78847969-78847988 | None:intergenic | 45.0% | |
GGTTCAAGAGAAGAGAGTGA+AGG | + | chr3.2:78846247-78846266 | None:intergenic | 45.0% | |
GTCGCGGTTGTTTAAAGAAG+TGG | + | chr3.2:78846153-78846172 | None:intergenic | 45.0% | |
TAAAGAAGTGGGATCGGAAC+CGG | + | chr3.2:78846141-78846160 | None:intergenic | 45.0% | |
TACATCTGATCCAGAGCTTC+AGG | - | chr3.2:78848037-78848056 | MS.gene06526:CDS | 45.0% | |
TCAGCTGGGAAATGATGCAA+GGG | + | chr3.2:78848107-78848126 | None:intergenic | 45.0% | |
TCCAAGCAAATGGTTGCAGA+AGG | + | chr3.2:78849513-78849532 | None:intergenic | 45.0% | |
TCGGTTTCGTGGAATGATTC+AGG | - | chr3.2:78846388-78846407 | MS.gene06526:intron | 45.0% | |
TCTCAACATTCCATCCCTGT+CGG | - | chr3.2:78846579-78846598 | MS.gene06526:intron | 45.0% | |
TCTCAAGAATGGAGGGCAAT+GGG | + | chr3.2:78848727-78848746 | None:intergenic | 45.0% | |
TCTCGAGGCACAAAGAAACA+AGG | + | chr3.2:78847014-78847033 | None:intergenic | 45.0% | |
TCTTTAAACAACCGCGACTG+GGG | - | chr3.2:78846155-78846174 | MS.gene06526:CDS | 45.0% | |
TGAGTGGGTACCTCTATCAT+AGG | + | chr3.2:78848359-78848378 | None:intergenic | 45.0% | |
TTCAGCTTCAGTTCAGACTC+TGG | + | chr3.2:78847990-78848009 | None:intergenic | 45.0% | |
TTCCACAGCTTCCAAGCAAA+TGG | + | chr3.2:78849523-78849542 | None:intergenic | 45.0% | |
TTCTCAAGAATGGAGGGCAA+TGG | + | chr3.2:78848728-78848747 | None:intergenic | 45.0% | |
TTGACGATTCCAACACATGG+AGG | + | chr3.2:78847631-78847650 | None:intergenic | 45.0% | |
! | AGGGGTATGCAATGTGTGAA+AGG | + | chr3.2:78848902-78848921 | None:intergenic | 45.0% |
! | CCTTTGACCAAGTCAGGTTT+TGG | + | chr3.2:78848495-78848514 | None:intergenic | 45.0% |
! | CTTATAAACCAGGTGCTGTG+AGG | + | chr3.2:78848233-78848252 | None:intergenic | 45.0% |
! | TAACTGACTCATAGGTCCAG+TGG | - | chr3.2:78847548-78847567 | MS.gene06526:CDS | 45.0% |
! | TGCAATGTGTGAAAGGCACA+AGG | + | chr3.2:78848895-78848914 | None:intergenic | 45.0% |
!! | AAGCAGAAGCTTTGGAAGCT+TGG | - | chr3.2:78849541-78849560 | MS.gene06526:intron | 45.0% |
!! | AATAGGGTACTGACGACTTG+AGG | + | chr3.2:78847417-78847436 | None:intergenic | 45.0% |
!! | ATAGGGTACTGACGACTTGA+GGG | + | chr3.2:78847416-78847435 | None:intergenic | 45.0% |
!! | CCAAAACCTGACTTGGTCAA+AGG | - | chr3.2:78848492-78848511 | MS.gene06526:intron | 45.0% |
!! | GAAGCTCTGGATCAGATGTA+AGG | + | chr3.2:78848037-78848056 | None:intergenic | 45.0% |
!! | GATAGAGGTACCCACTCAAA+TGG | - | chr3.2:78848361-78848380 | MS.gene06526:CDS | 45.0% |
!! | TATTGAAGGATGGTTCGGTG+TGG | - | chr3.2:78846532-78846551 | MS.gene06526:intron | 45.0% |
!! | TGACTTGGTCAAAGGCATCA+GGG | - | chr3.2:78848500-78848519 | MS.gene06526:intron | 45.0% |
!! | TTCACGTATCTGATAGTGGC+TGG | + | chr3.2:78846353-78846372 | None:intergenic | 45.0% |
ACGAGAAATGGACAGCTCAC+CGG | + | chr3.2:78846654-78846673 | None:intergenic | 50.0% | |
ACTGACGACTTGAGGGTCTA+TGG | + | chr3.2:78847409-78847428 | None:intergenic | 50.0% | |
AGCAAATGGTTGCAGAAGGC+CGG | + | chr3.2:78849509-78849528 | None:intergenic | 50.0% | |
AGCTGTGGAAGCAGAAGCTT+TGG | - | chr3.2:78849533-78849552 | MS.gene06526:intron | 50.0% | |
AGGTAGGGCAACAAAAGGTC+AGG | + | chr3.2:78850160-78850179 | None:intergenic | 50.0% | |
ATACTAGAGCCAGCGATCTC+AGG | + | chr3.2:78847776-78847795 | None:intergenic | 50.0% | |
ATAGTGGCTGGTGTGAGAAG+CGG | + | chr3.2:78846341-78846360 | None:intergenic | 50.0% | |
ATCTGATCCAGAGCTTCAGG+AGG | - | chr3.2:78848040-78848059 | MS.gene06526:CDS | 50.0% | |
ATTGGTCGGAGAGAAGGTTG+CGG | + | chr3.2:78846196-78846215 | None:intergenic | 50.0% | |
CCAATGTTCTAGTGACAGGG+TGG | + | chr3.2:78850238-78850257 | None:intergenic | 50.0% | |
CCACCCTGTCACTAGAACAT+TGG | - | chr3.2:78850235-78850254 | MS.gene06526:CDS | 50.0% | |
CGACCAATCACATCTCTCTC+AGG | - | chr3.2:78846208-78846227 | MS.gene06526:intron | 50.0% | |
CTGATGCCTTTGACCAAGTC+AGG | + | chr3.2:78848501-78848520 | None:intergenic | 50.0% | |
CTGTGGGTGTAGAGAATGCA+AGG | - | chr3.2:78849159-78849178 | MS.gene06526:CDS | 50.0% | |
GAACCTTCAGCAGAAGCAGT+TGG | - | chr3.2:78846876-78846895 | MS.gene06526:CDS | 50.0% | |
GCACAAGGTTCTTGACAGCA+TGG | + | chr3.2:78848880-78848899 | None:intergenic | 50.0% | |
GCATCATTTCCCAGCTGACA+AGG | - | chr3.2:78848109-78848128 | MS.gene06526:intron | 50.0% | |
GCCTTCTGCAACCATTTGCT+TGG | - | chr3.2:78849509-78849528 | MS.gene06526:intron | 50.0% | |
GCGTGGTACCTGCAATTTAG+AGG | + | chr3.2:78848282-78848301 | None:intergenic | 50.0% | |
GCTCTGCTGATACGCCTATT+TGG | - | chr3.2:78846604-78846623 | MS.gene06526:intron | 50.0% | |
GGTAGGGCAACAAAAGGTCA+GGG | + | chr3.2:78850159-78850178 | None:intergenic | 50.0% | |
GGTGTCTTGCAACTAGCTGA+AGG | - | chr3.2:78849086-78849105 | MS.gene06526:intron | 50.0% | |
GTCAGCTGGGAAATGATGCA+AGG | + | chr3.2:78848108-78848127 | None:intergenic | 50.0% | |
GTTGAGGGTGATGAGGTTGA+AGG | - | chr3.2:78847167-78847186 | MS.gene06526:CDS | 50.0% | |
GTTGCTGCATCTCCTATCCA+AGG | - | chr3.2:78848584-78848603 | MS.gene06526:CDS | 50.0% | |
TATCAGCAGAGCAACCGACA+GGG | + | chr3.2:78846596-78846615 | None:intergenic | 50.0% | |
TTCTATGTCCTCACAGCACC+TGG | - | chr3.2:78848222-78848241 | MS.gene06526:intron | 50.0% | |
TTGCCAACTGCTTCTGCTGA+AGG | + | chr3.2:78846882-78846901 | None:intergenic | 50.0% | |
! | AGGGTAGATGCTCTTGCTGT+GGG | - | chr3.2:78848791-78848810 | MS.gene06526:intron | 50.0% |
! | GATGTGATTGGTCGGAGAGA+AGG | + | chr3.2:78846202-78846221 | None:intergenic | 50.0% |
! | TTCACAGGTTGAGGGTGATG+AGG | - | chr3.2:78847160-78847179 | MS.gene06526:CDS | 50.0% |
! | TTTTGACCAGGTGGAAGCCA+GGG | - | chr3.2:78848772-78848791 | MS.gene06526:intron | 50.0% |
!! | AAGCTTTGGAAGCTTGGAGG+TGG | - | chr3.2:78849547-78849566 | MS.gene06526:intron | 50.0% |
!! | ACTGTTTTGGGTGTTCCAGG+TGG | - | chr3.2:78850015-78850034 | MS.gene06526:intron | 50.0% |
!! | CAGAAGCTTTGGAAGCTTGG+AGG | - | chr3.2:78849544-78849563 | MS.gene06526:intron | 50.0% |
!! | CTGACTTGGTCAAAGGCATC+AGG | - | chr3.2:78848499-78848518 | MS.gene06526:intron | 50.0% |
!! | TGCACTGTTTTGGGTGTTCC+AGG | - | chr3.2:78850012-78850031 | MS.gene06526:CDS | 50.0% |
AGGTTCCGGGACTGAATTCG+TGG | - | chr3.2:78846850-78846869 | MS.gene06526:CDS | 55.0% | |
ATGGTTGCAGAAGGCCGGAT+AGG | + | chr3.2:78849504-78849523 | None:intergenic | 55.0% | |
CAGGGTAGATGCTCTTGCTG+TGG | - | chr3.2:78848790-78848809 | MS.gene06526:intron | 55.0% | |
GCGGAGTCTCTCCAATTCCT+TGG | + | chr3.2:78850268-78850287 | None:intergenic | 55.0% | |
GGTTCCGGGACTGAATTCGT+GGG | - | chr3.2:78846851-78846870 | MS.gene06526:CDS | 55.0% | |
GTATCAGCAGAGCAACCGAC+AGG | + | chr3.2:78846597-78846616 | None:intergenic | 55.0% | |
TACAGCTCCCTGAGACTGAG+AGG | + | chr3.2:78847753-78847772 | None:intergenic | 55.0% | |
TCGTTGTCCTCCTGAAGCTC+TGG | + | chr3.2:78848050-78848069 | None:intergenic | 55.0% | |
TCTGCCCACGAATTCAGTCC+CGG | + | chr3.2:78846858-78846877 | None:intergenic | 55.0% | |
TGGCGAGGAGATCGTACTGT+GGG | + | chr3.2:78846073-78846092 | None:intergenic | 55.0% | |
TTGGCGAGGAGATCGTACTG+TGG | + | chr3.2:78846074-78846093 | None:intergenic | 55.0% | |
! | CTTTTGACCAGGTGGAAGCC+AGG | - | chr3.2:78848771-78848790 | MS.gene06526:intron | 55.0% |
! | GGGTAGATGCTCTTGCTGTG+GGG | - | chr3.2:78848792-78848811 | MS.gene06526:intron | 55.0% |
!! | CACAGCAAGAGCATCTACCC+TGG | + | chr3.2:78848792-78848811 | None:intergenic | 55.0% |
!! | TGAAGGATGGTTCGGTGTGG+AGG | - | chr3.2:78846535-78846554 | MS.gene06526:intron | 55.0% |
AGAAGTGGGATCGGAACCGG+TGG | + | chr3.2:78846138-78846157 | None:intergenic | 60.0% | |
AGCAGAGCAACCGACAGGGA+TGG | + | chr3.2:78846592-78846611 | None:intergenic | 60.0% | |
ATCGGAACCGGTGGCTATGG+CGG | + | chr3.2:78846129-78846148 | None:intergenic | 60.0% | |
CATCTACCCTGGCTTCCACC+TGG | + | chr3.2:78848781-78848800 | None:intergenic | 60.0% | |
CTCCCTGAGACTGAGAGGCA+GGG | + | chr3.2:78847748-78847767 | None:intergenic | 60.0% | |
GATCTCCTCGCCAACCCACT+CGG | - | chr3.2:78846080-78846099 | MS.gene06526:CDS | 60.0% | |
GGAGCTGTACCTGAGATCGC+TGG | - | chr3.2:78847764-78847783 | MS.gene06526:CDS | 60.0% | |
TCCCCTGCCTCTCAGTCTCA+GGG | - | chr3.2:78847743-78847762 | MS.gene06526:intron | 60.0% | |
TCCCTGAGACTGAGAGGCAG+GGG | + | chr3.2:78847747-78847766 | None:intergenic | 60.0% | |
TGGAGAGACTCCGCAGAGAG+AGG | - | chr3.2:78850274-78850293 | MS.gene06526:CDS | 60.0% | |
TGGATCTGACCGCACCGAGT+GGG | + | chr3.2:78846097-78846116 | None:intergenic | 60.0% | |
TTCCCCTGCCTCTCAGTCTC+AGG | - | chr3.2:78847742-78847761 | MS.gene06526:intron | 60.0% | |
GATCGATGACGCCCCAGTCG+CGG | + | chr3.2:78846169-78846188 | None:intergenic | 65.0% | |
GCTCCCTGAGACTGAGAGGC+AGG | + | chr3.2:78847749-78847768 | None:intergenic | 65.0% | |
GGGATCGGAACCGGTGGCTA+TGG | + | chr3.2:78846132-78846151 | None:intergenic | 65.0% | |
GTGGATCTGACCGCACCGAG+TGG | + | chr3.2:78846098-78846117 | None:intergenic | 65.0% | |
TCTGACCGCACCGAGTGGGT+TGG | + | chr3.2:78846093-78846112 | None:intergenic | 65.0% | |
TTCGACGCCGCCATAGCCAC+CGG | - | chr3.2:78846119-78846138 | MS.gene06526:CDS | 65.0% | |
! | CCTCGCCAACCCACTCGGTG+CGG | - | chr3.2:78846085-78846104 | MS.gene06526:CDS | 70.0% |
! | GGCTATGGCGGCGTCGAAGG+TGG | + | chr3.2:78846117-78846136 | None:intergenic | 70.0% |
! | GGTGGCTATGGCGGCGTCGA+AGG | + | chr3.2:78846120-78846139 | None:intergenic | 70.0% |
!! | CCGCACCGAGTGGGTTGGCG+AGG | + | chr3.2:78846088-78846107 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 78846062 | 78850305 | 78846062 | ID=MS.gene06526 |
chr3.2 | mRNA | 78846062 | 78850305 | 78846062 | ID=MS.gene06526.t1;Parent=MS.gene06526 |
chr3.2 | exon | 78850138 | 78850305 | 78850138 | ID=MS.gene06526.t1.exon1;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78850138 | 78850305 | 78850138 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78849919 | 78850032 | 78849919 | ID=MS.gene06526.t1.exon2;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78849919 | 78850032 | 78849919 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78849714 | 78849827 | 78849714 | ID=MS.gene06526.t1.exon3;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78849714 | 78849827 | 78849714 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78849390 | 78849515 | 78849390 | ID=MS.gene06526.t1.exon4;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78849390 | 78849515 | 78849390 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78849156 | 78849200 | 78849156 | ID=MS.gene06526.t1.exon5;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78849156 | 78849200 | 78849156 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78848523 | 78848642 | 78848523 | ID=MS.gene06526.t1.exon6;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78848523 | 78848642 | 78848523 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78848237 | 78848392 | 78848237 | ID=MS.gene06526.t1.exon7;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78848237 | 78848392 | 78848237 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78848000 | 78848074 | 78848000 | ID=MS.gene06526.t1.exon8;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78848000 | 78848074 | 78848000 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78847762 | 78847875 | 78847762 | ID=MS.gene06526.t1.exon9;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78847762 | 78847875 | 78847762 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78847386 | 78847585 | 78847386 | ID=MS.gene06526.t1.exon10;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78847386 | 78847585 | 78847386 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78847156 | 78847291 | 78847156 | ID=MS.gene06526.t1.exon11;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78847156 | 78847291 | 78847156 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78846744 | 78846971 | 78846744 | ID=MS.gene06526.t1.exon12;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78846744 | 78846971 | 78846744 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78846266 | 78846333 | 78846266 | ID=MS.gene06526.t1.exon13;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78846266 | 78846333 | 78846266 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
chr3.2 | exon | 78846062 | 78846176 | 78846062 | ID=MS.gene06526.t1.exon14;Parent=MS.gene06526.t1 |
chr3.2 | CDS | 78846062 | 78846176 | 78846062 | ID=cds.MS.gene06526.t1;Parent=MS.gene06526.t1 |
Gene Sequence |
Protein sequence |