Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065663.t1 | XP_003592540.2 | 76.5 | 51 | 12 | 0 | 38 | 88 | 155 | 205 | 2.10E-11 | 79 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065663.t1 | G7IAS0 | 76.5 | 51 | 12 | 0 | 38 | 88 | 155 | 205 | 1.5e-11 | 79.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene065663 | 0.801876 | 7.32E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene065663 | 0.821427 | 4.06E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene065663 | 0.849166 | 3.85E-60 | -1.69E-46 |
| MS.gene049850 | MS.gene065663 | 0.801341 | 9.42E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene065663 | 0.822972 | 1.78E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene065663 | 0.800306 | 1.53E-48 | -1.69E-46 |
| MS.gene052358 | MS.gene065663 | -0.804013 | 2.65E-49 | -1.69E-46 |
| MS.gene052384 | MS.gene065663 | 0.803773 | 2.97E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene065663 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene065663 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene065663 | 0.812596 | 3.92E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene065663 | 0.81675 | 4.71E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene065663 | 0.806768 | 7.01E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene065663 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene065663 | 0.839175 | 1.85E-57 | -1.69E-46 |
| MS.gene061040 | MS.gene065663 | -0.828557 | 8.42E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065663.t1 | MTR_1g108270 | 48.182 | 110 | 8 | 1 | 38 | 98 | 155 | 264 | 7.28e-23 | 93.6 |
| MS.gene065663.t1 | MTR_1g107580 | 86.667 | 30 | 4 | 0 | 1 | 30 | 1 | 30 | 2.73e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAACTTGTTCTTGTAAT+TGG | 0.085666 | 1.4:+83082875 | None:intergenic |
| CATTCTTGCTCTGGGTAATT+TGG | 0.193714 | 1.4:+83082797 | None:intergenic |
| TGGATTGAAGCCTCAAATAT+TGG | 0.265159 | 1.4:-83082686 | MS.gene065663:CDS |
| ATCAACTTGTTCTTGTAATT+GGG | 0.349026 | 1.4:+83082876 | None:intergenic |
| TGAAGGTTAATGAAGTTTGT+AGG | 0.377403 | 1.4:-83082524 | MS.gene065663:intron |
| AAGTGTCACCATTCTTGCTC+TGG | 0.406945 | 1.4:+83082788 | None:intergenic |
| CATTTAGCTTCTAACACTGT+TGG | 0.415082 | 1.4:-83082844 | MS.gene065663:CDS |
| TGAGCCTGACGCGGTTACTA+TGG | 0.420376 | 1.4:-83082481 | MS.gene065663:intron |
| TGTAGGGAGATGAAGGATGA+TGG | 0.433447 | 1.4:-83082507 | MS.gene065663:CDS |
| ATTTAGCTTCTAACACTGTT+GGG | 0.450437 | 1.4:-83082843 | MS.gene065663:CDS |
| TGAAGTTTGTAGGGAGATGA+AGG | 0.454618 | 1.4:-83082514 | MS.gene065663:CDS |
| ATCCTCTCAAACGTCTTCAA+TGG | 0.456070 | 1.4:+83082718 | None:intergenic |
| GAAGGTTAATGAAGTTTGTA+GGG | 0.457183 | 1.4:-83082523 | MS.gene065663:intron |
| ATTGAAGACGTTTGAGAGGA+TGG | 0.458694 | 1.4:-83082716 | MS.gene065663:CDS |
| CAAATTACCCAGAGCAAGAA+TGG | 0.474736 | 1.4:-83082796 | MS.gene065663:CDS |
| TTGGTAAAATCCAATATTTG+AGG | 0.488016 | 1.4:+83082676 | None:intergenic |
| TATACCATAGTAACCGCGTC+AGG | 0.499602 | 1.4:+83082477 | None:intergenic |
| CACATATCGCCGAGCAATGA+GGG | 0.514604 | 1.4:+83082762 | None:intergenic |
| CACTGTTGGGACATTGCAAA+GGG | 0.516775 | 1.4:-83082830 | MS.gene065663:CDS |
| CACGACTCCGTGACTTGACA+AGG | 0.528477 | 1.4:-83081741 | MS.gene065663:CDS |
| TGTGAGAGATAAGATTATCA+AGG | 0.555970 | 1.4:-83082743 | MS.gene065663:CDS |
| AGTGTCACCATTCTTGCTCT+GGG | 0.556388 | 1.4:+83082789 | None:intergenic |
| TGTCATACAAACTACAAAGC+AGG | 0.572105 | 1.4:+83080728 | None:intergenic |
| AACCATTGAAGACGTTTGAG+AGG | 0.577335 | 1.4:-83082720 | MS.gene065663:CDS |
| TTGCTCTGGGTAATTTGGCG+AGG | 0.583601 | 1.4:+83082802 | None:intergenic |
| CTTGTCAAGTCACGGAGTCG+TGG | 0.584700 | 1.4:+83081742 | None:intergenic |
| GACTTACCCTTGTCAAGTCA+CGG | 0.588220 | 1.4:+83081734 | None:intergenic |
| ACACTGTTGGGACATTGCAA+AGG | 0.594567 | 1.4:-83082831 | MS.gene065663:CDS |
| TCACATATCGCCGAGCAATG+AGG | 0.598991 | 1.4:+83082761 | None:intergenic |
| TTGTCAAGTCACGGAGTCGT+GGG | 0.627320 | 1.4:+83081743 | None:intergenic |
| ACGACTCCGTGACTTGACAA+GGG | 0.705194 | 1.4:-83081740 | MS.gene065663:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTGAATTTTATAAT+AGG | - | chr1.4:83081688-83081707 | MS.gene065663:intron | 10.0% |
| !!! | TTTATTTTTCTATAAAAATC+AGG | + | chr1.4:83081539-83081558 | None:intergenic | 10.0% |
| !!! | TTTTTAATGTTTTAAGTTTA+TGG | - | chr1.4:83081363-83081382 | MS.gene065663:intron | 10.0% |
| !! | AATATTACATAAGAATAAAG+GGG | + | chr1.4:83082290-83082309 | None:intergenic | 15.0% |
| !! | AGAATATTACATAAGAATAA+AGG | + | chr1.4:83082292-83082311 | None:intergenic | 15.0% |
| !! | GAATATTACATAAGAATAAA+GGG | + | chr1.4:83082291-83082310 | None:intergenic | 15.0% |
| !!! | GATAAATAGAAGTATAAAAT+TGG | + | chr1.4:83082587-83082606 | None:intergenic | 15.0% |
| !! | AAAGAGATAATAAATGCAAA+AGG | + | chr1.4:83082796-83082815 | None:intergenic | 20.0% |
| !! | AAGAGATAATAAATGCAAAA+GGG | + | chr1.4:83082795-83082814 | None:intergenic | 20.0% |
| !! | ATATATTAGTGGCAAAATAA+TGG | - | chr1.4:83082478-83082497 | MS.gene065663:intron | 20.0% |
| !! | ATATATTGTACTTTGATTAC+TGG | - | chr1.4:83081247-83081266 | MS.gene065663:intron | 20.0% |
| !! | ATCAGTTTGATCATTAAAAA+TGG | + | chr1.4:83082527-83082546 | None:intergenic | 20.0% |
| !! | GATAAGCATTTCATATATAA+TGG | + | chr1.4:83082765-83082784 | None:intergenic | 20.0% |
| !! | GTAAAGAGTTTAAATGATAA+TGG | + | chr1.4:83082378-83082397 | None:intergenic | 20.0% |
| !!! | AAATTTTACTACCTAAATCA+AGG | + | chr1.4:83081664-83081683 | None:intergenic | 20.0% |
| !!! | AATTTTACTACCTAAATCAA+GGG | + | chr1.4:83081663-83081682 | None:intergenic | 20.0% |
| !!! | ATTGATGATGATTAGATTAT+TGG | + | chr1.4:83082721-83082740 | None:intergenic | 20.0% |
| !!! | TTGATCATTAAAAATGGTTT+TGG | + | chr1.4:83082521-83082540 | None:intergenic | 20.0% |
| !!! | TTTTTCTATAAAAATCAGGA+TGG | + | chr1.4:83081535-83081554 | None:intergenic | 20.0% |
| ! | AAGGGAAATATTCATTTGTA+GGG | + | chr1.4:83081645-83081664 | None:intergenic | 25.0% |
| ! | AATATATCATACTAATGGAG+AGG | + | chr1.4:83082267-83082286 | None:intergenic | 25.0% |
| ! | AATCATCAATGCATATTGTA+TGG | - | chr1.4:83081154-83081173 | MS.gene065663:intron | 25.0% |
| ! | ACATTCTAACAAAATACTCA+AGG | + | chr1.4:83081043-83081062 | None:intergenic | 25.0% |
| ! | ATATATCATACTAATGGAGA+GGG | + | chr1.4:83082266-83082285 | None:intergenic | 25.0% |
| ! | ATGAATATTTCCCTTGATTT+AGG | - | chr1.4:83081650-83081669 | MS.gene065663:intron | 25.0% |
| ! | GCTCAAGCTATAAATATAAA+AGG | + | chr1.4:83081900-83081919 | None:intergenic | 25.0% |
| ! | GTACAATATATATGAAGACT+AGG | + | chr1.4:83081238-83081257 | None:intergenic | 25.0% |
| ! | TTGGTAAAATCCAATATTTG+AGG | + | chr1.4:83080936-83080955 | None:intergenic | 25.0% |
| ! | TTGTTTACCTTGTATTAACA+AGG | + | chr1.4:83081831-83081850 | None:intergenic | 25.0% |
| ! | TTTATCATGAGATACAATCA+AGG | - | chr1.4:83081203-83081222 | MS.gene065663:intron | 25.0% |
| !! | ATCAACTTGTTCTTGTAATT+GGG | + | chr1.4:83080736-83080755 | None:intergenic | 25.0% |
| !! | TATCAACTTGTTCTTGTAAT+TGG | + | chr1.4:83080737-83080756 | None:intergenic | 25.0% |
| !! | TCAAATATTGGATTTTACCA+AGG | - | chr1.4:83080935-83080954 | MS.gene065663:CDS | 25.0% |
| !! | TGAGTATTTTGTTAGAATGT+TGG | - | chr1.4:83081043-83081062 | MS.gene065663:intron | 25.0% |
| !!! | AATTTTGATGTGACTTTACA+TGG | + | chr1.4:83082210-83082229 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTGACTTTACAT+GGG | + | chr1.4:83082209-83082228 | None:intergenic | 25.0% |
| !!! | CATGGATTTGTTTGTTTTTT+TGG | - | chr1.4:83082411-83082430 | MS.gene065663:intron | 25.0% |
| !!! | TATCATTTATTTTGGTCATG+TGG | - | chr1.4:83082454-83082473 | MS.gene065663:intron | 25.0% |
| !!! | TTTGTTTTTTTGGTGAAAGA+TGG | - | chr1.4:83082421-83082440 | MS.gene065663:intron | 25.0% |
| AAAACTCAGTATTCCCTAAA+AGG | - | chr1.4:83081737-83081756 | MS.gene065663:intron | 30.0% | |
| AAATCCATGTCAGTAAAATC+TGG | + | chr1.4:83082400-83082419 | None:intergenic | 30.0% | |
| AAGTTTATCAGAGTCATAGA+AGG | + | chr1.4:83082819-83082838 | None:intergenic | 30.0% | |
| AGGGGAATATATCATACTAA+TGG | + | chr1.4:83082272-83082291 | None:intergenic | 30.0% | |
| ATTGCTAATTAGTGACTAAC+TGG | + | chr1.4:83081806-83081825 | None:intergenic | 30.0% | |
| CAAAATACTCAAGGTAGTAT+AGG | + | chr1.4:83081034-83081053 | None:intergenic | 30.0% | |
| CAAGGGAAATATTCATTTGT+AGG | + | chr1.4:83081646-83081665 | None:intergenic | 30.0% | |
| CTATGCAAAATGAAGAAGAA+GGG | - | chr1.4:83081299-83081318 | MS.gene065663:intron | 30.0% | |
| GAAGGTTAATGAAGTTTGTA+GGG | - | chr1.4:83081086-83081105 | MS.gene065663:intron | 30.0% | |
| TACTCACTAATACTTCTTAC+TGG | + | chr1.4:83082330-83082349 | None:intergenic | 30.0% | |
| TATAAAAATCAGGATGGTAG+TGG | + | chr1.4:83081529-83081548 | None:intergenic | 30.0% | |
| TATGACTCTGATAAACTTGT+AGG | - | chr1.4:83082821-83082840 | MS.gene065663:CDS | 30.0% | |
| TATGCAAAATGAAGAAGAAG+GGG | - | chr1.4:83081300-83081319 | MS.gene065663:intron | 30.0% | |
| TGAAGGTTAATGAAGTTTGT+AGG | - | chr1.4:83081085-83081104 | MS.gene065663:intron | 30.0% | |
| TGTGAGAGATAAGATTATCA+AGG | - | chr1.4:83080866-83080885 | MS.gene065663:intron | 30.0% | |
| TTTGAGAGGATGGAAAAATA+TGG | - | chr1.4:83080903-83080922 | MS.gene065663:intron | 30.0% | |
| ! | ATTTAGCTTCTAACACTGTT+GGG | - | chr1.4:83080766-83080785 | MS.gene065663:CDS | 30.0% |
| ! | TTTACCAGATTTTACTGACA+TGG | - | chr1.4:83082393-83082412 | MS.gene065663:intron | 30.0% |
| AAAAGGAAGAATCCAGTACA+AGG | - | chr1.4:83081754-83081773 | MS.gene065663:CDS | 35.0% | |
| ATTTAAGCACTAACCGATGT+GGG | - | chr1.4:83081931-83081950 | MS.gene065663:intron | 35.0% | |
| CTGATTATTGAGCAACTTGA+AGG | + | chr1.4:83082006-83082025 | None:intergenic | 35.0% | |
| GATAAAGCACAAGAACTGAT+CGG | - | chr1.4:83080994-83081013 | MS.gene065663:intron | 35.0% | |
| GCAATCTCCTTGTTAATACA+AGG | - | chr1.4:83081821-83081840 | MS.gene065663:intron | 35.0% | |
| GCTATGCAAAATGAAGAAGA+AGG | - | chr1.4:83081298-83081317 | MS.gene065663:intron | 35.0% | |
| GGTAGTATAGGACTTAAGAT+AGG | + | chr1.4:83081022-83081041 | None:intergenic | 35.0% | |
| TGATTCGAAACGTATGAAAG+TGG | + | chr1.4:83082090-83082109 | None:intergenic | 35.0% | |
| TGGATTGAAGCCTCAAATAT+TGG | - | chr1.4:83080923-83080942 | MS.gene065663:intron | 35.0% | |
| TGTCATACAAACTACAAAGC+AGG | + | chr1.4:83082884-83082903 | None:intergenic | 35.0% | |
| TTGCTAACAAATGACCAAAC+TGG | - | chr1.4:83081714-83081733 | MS.gene065663:intron | 35.0% | |
| ! | CATTTAGCTTCTAACACTGT+TGG | - | chr1.4:83080765-83080784 | MS.gene065663:CDS | 35.0% |
| ! | GAATACTGAGTTTTCCAGTT+TGG | + | chr1.4:83081731-83081750 | None:intergenic | 35.0% |
| ! | GTACTGGATTCTTCCTTTTA+GGG | + | chr1.4:83081753-83081772 | None:intergenic | 35.0% |
| ! | TGTACTGGATTCTTCCTTTT+AGG | + | chr1.4:83081754-83081773 | None:intergenic | 35.0% |
| ! | TGTACTTTGATTACTGGTCT+TGG | - | chr1.4:83081253-83081272 | MS.gene065663:intron | 35.0% |
| !! | CCAACAGCAAAATTTGTTGA+AGG | - | chr1.4:83081068-83081087 | MS.gene065663:intron | 35.0% |
| !! | CCTTCAACAAATTTTGCTGT+TGG | + | chr1.4:83081071-83081090 | None:intergenic | 35.0% |
| !! | CTTCAAGTTGCTCAATAATC+AGG | - | chr1.4:83082004-83082023 | MS.gene065663:intron | 35.0% |
| !! | TTGATTACTGGTCTTGGTAA+TGG | - | chr1.4:83081259-83081278 | MS.gene065663:intron | 35.0% |
| !!! | GCGTTCTCTCTTACATTTTT+TGG | - | chr1.4:83081337-83081356 | MS.gene065663:intron | 35.0% |
| AAATGAAGAAGAAGGGGCAA+AGG | - | chr1.4:83081306-83081325 | MS.gene065663:intron | 40.0% | |
| AACCATTGAAGACGTTTGAG+AGG | - | chr1.4:83080889-83080908 | MS.gene065663:intron | 40.0% | |
| ATCAGGGAACATTGTGAGAT+AGG | + | chr1.4:83082032-83082051 | None:intergenic | 40.0% | |
| ATCCTCTCAAACGTCTTCAA+TGG | + | chr1.4:83080894-83080913 | None:intergenic | 40.0% | |
| ATTGAAGACGTTTGAGAGGA+TGG | - | chr1.4:83080893-83080912 | MS.gene065663:intron | 40.0% | |
| CAAATTACCCAGAGCAAGAA+TGG | - | chr1.4:83080813-83080832 | MS.gene065663:intron | 40.0% | |
| CAATGTCCAAAACTTCTGCT+AGG | + | chr1.4:83082166-83082185 | None:intergenic | 40.0% | |
| CAGTACAAGGATTCTTCTAC+TGG | - | chr1.4:83081767-83081786 | MS.gene065663:CDS | 40.0% | |
| CAGTAGAAGAATCCTTGTAC+TGG | + | chr1.4:83081769-83081788 | None:intergenic | 40.0% | |
| GATTTAAGCACTAACCGATG+TGG | - | chr1.4:83081930-83081949 | MS.gene065663:intron | 40.0% | |
| GGTCATGTGGCATATATTAG+TGG | - | chr1.4:83082467-83082486 | MS.gene065663:intron | 40.0% | |
| TATCATACTAATGGAGAGGG+AGG | + | chr1.4:83082263-83082282 | None:intergenic | 40.0% | |
| TCGAAACGTATGAAAGTGGA+GGG | + | chr1.4:83082086-83082105 | None:intergenic | 40.0% | |
| TGAAGTTTGTAGGGAGATGA+AGG | - | chr1.4:83081095-83081114 | MS.gene065663:intron | 40.0% | |
| TGTGACTTTACATGGGAACT+AGG | + | chr1.4:83082202-83082221 | None:intergenic | 40.0% | |
| TTCGAAACGTATGAAAGTGG+AGG | + | chr1.4:83082087-83082106 | None:intergenic | 40.0% | |
| TTCGTTCTGCAAACATGAGA+AGG | + | chr1.4:83082239-83082258 | None:intergenic | 40.0% | |
| ! | ACAAGGGGTCGTGAAAATTT+TGG | - | chr1.4:83081593-83081612 | MS.gene065663:intron | 40.0% |
| ! | CAAGGGGTCGTGAAAATTTT+GGG | - | chr1.4:83081594-83081613 | MS.gene065663:intron | 40.0% |
| ! | CATTCTTGCTCTGGGTAATT+TGG | + | chr1.4:83080815-83080834 | None:intergenic | 40.0% |
| ! | GCACGAAACATTGATTACCT+TGG | + | chr1.4:83080955-83080974 | None:intergenic | 40.0% |
| ! | TTTCTGCCTAGCAGAAGTTT+TGG | - | chr1.4:83082157-83082176 | MS.gene065663:intron | 40.0% |
| !! | TCTTGGTAATGGTAGTCGAA+TGG | - | chr1.4:83081270-83081289 | MS.gene065663:intron | 40.0% |
| !!! | ACACTTTTTCCCTCATTGCT+CGG | - | chr1.4:83080838-83080857 | MS.gene065663:intron | 40.0% |
| AAGTGTCACCATTCTTGCTC+TGG | + | chr1.4:83080824-83080843 | None:intergenic | 45.0% | |
| ACACTGTTGGGACATTGCAA+AGG | - | chr1.4:83080778-83080797 | MS.gene065663:intron | 45.0% | |
| AGTGTCACCATTCTTGCTCT+GGG | + | chr1.4:83080823-83080842 | None:intergenic | 45.0% | |
| CACTGTTGGGACATTGCAAA+GGG | - | chr1.4:83080779-83080798 | MS.gene065663:intron | 45.0% | |
| CCATTTAACCCCAACACAAG+GGG | - | chr1.4:83081578-83081597 | MS.gene065663:intron | 45.0% | |
| CCCATTTAACCCCAACACAA+GGG | - | chr1.4:83081577-83081596 | MS.gene065663:intron | 45.0% | |
| CCCTTGTGTTGGGGTTAAAT+GGG | + | chr1.4:83081580-83081599 | None:intergenic | 45.0% | |
| GACTTACCCTTGTCAAGTCA+CGG | + | chr1.4:83081878-83081897 | None:intergenic | 45.0% | |
| TATACCATAGTAACCGCGTC+AGG | + | chr1.4:83081135-83081154 | None:intergenic | 45.0% | |
| TCCCATTTAACCCCAACACA+AGG | - | chr1.4:83081576-83081595 | MS.gene065663:intron | 45.0% | |
| TGTAGGGAGATGAAGGATGA+TGG | - | chr1.4:83081102-83081121 | MS.gene065663:intron | 45.0% | |
| TTTCCGACTAAAGCCCACAT+CGG | + | chr1.4:83081947-83081966 | None:intergenic | 45.0% | |
| ! | ATTTTCACGACCCCTTGTGT+TGG | + | chr1.4:83081591-83081610 | None:intergenic | 45.0% |
| ! | TAACCGATGTGGGCTTTAGT+CGG | - | chr1.4:83081941-83081960 | MS.gene065663:intron | 45.0% |
| ! | TTTTCACGACCCCTTGTGTT+GGG | + | chr1.4:83081590-83081609 | None:intergenic | 45.0% |
| !!! | TTAATTTATATCATTTATTT+TGG | - | chr1.4:83082446-83082465 | MS.gene065663:intron | 5.0% |
| ACGACTCCGTGACTTGACAA+GGG | - | chr1.4:83081869-83081888 | MS.gene065663:intron | 50.0% | |
| AGCAACTTGAAGGACCGTTG+AGG | + | chr1.4:83081996-83082015 | None:intergenic | 50.0% | |
| AGCATTTCAATGCGCGTGAG+TGG | + | chr1.4:83082055-83082074 | None:intergenic | 50.0% | |
| CACATATCGCCGAGCAATGA+GGG | + | chr1.4:83080850-83080869 | None:intergenic | 50.0% | |
| CCCCTTGTGTTGGGGTTAAA+TGG | + | chr1.4:83081581-83081600 | None:intergenic | 50.0% | |
| GCAACTTGAAGGACCGTTGA+GGG | + | chr1.4:83081995-83082014 | None:intergenic | 50.0% | |
| TCACATATCGCCGAGCAATG+AGG | + | chr1.4:83080851-83080870 | None:intergenic | 50.0% | |
| TTGTCAAGTCACGGAGTCGT+GGG | + | chr1.4:83081869-83081888 | None:intergenic | 50.0% | |
| TTTCACGACCCCTTGTGTTG+GGG | + | chr1.4:83081589-83081608 | None:intergenic | 50.0% | |
| ! | TTGCTCTGGGTAATTTGGCG+AGG | + | chr1.4:83080810-83080829 | None:intergenic | 50.0% |
| !!! | TGATGGTTTTGAGCCTGACG+CGG | - | chr1.4:83081119-83081138 | MS.gene065663:intron | 50.0% |
| CAATGCGCGTGAGTGGATCA+GGG | + | chr1.4:83082048-83082067 | None:intergenic | 55.0% | |
| CACGACTCCGTGACTTGACA+AGG | - | chr1.4:83081868-83081887 | MS.gene065663:intron | 55.0% | |
| CCACTCACTCACTCCCTCAA+CGG | - | chr1.4:83081979-83081998 | MS.gene065663:intron | 55.0% | |
| CTTGTCAAGTCACGGAGTCG+TGG | + | chr1.4:83081870-83081889 | None:intergenic | 55.0% | |
| TCAATGCGCGTGAGTGGATC+AGG | + | chr1.4:83082049-83082068 | None:intergenic | 55.0% | |
| TGAGCCTGACGCGGTTACTA+TGG | - | chr1.4:83081128-83081147 | MS.gene065663:intron | 55.0% | |
| CCGTTGAGGGAGTGAGTGAG+TGG | + | chr1.4:83081982-83082001 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83080720 | 83082911 | 83080720 | ID=MS.gene065663 |
| chr1.4 | mRNA | 83080720 | 83082911 | 83080720 | ID=MS.gene065663.t1;Parent=MS.gene065663 |
| chr1.4 | exon | 83082675 | 83082911 | 83082675 | ID=MS.gene065663.t1.exon1;Parent=MS.gene065663.t1 |
| chr1.4 | CDS | 83082675 | 83082911 | 83082675 | ID=cds.MS.gene065663.t1;Parent=MS.gene065663.t1 |
| chr1.4 | exon | 83082482 | 83082541 | 83082482 | ID=MS.gene065663.t1.exon2;Parent=MS.gene065663.t1 |
| chr1.4 | CDS | 83082482 | 83082541 | 83082482 | ID=cds.MS.gene065663.t1;Parent=MS.gene065663.t1 |
| chr1.4 | exon | 83081741 | 83081788 | 83081741 | ID=MS.gene065663.t1.exon3;Parent=MS.gene065663.t1 |
| chr1.4 | CDS | 83081741 | 83081788 | 83081741 | ID=cds.MS.gene065663.t1;Parent=MS.gene065663.t1 |
| chr1.4 | exon | 83080929 | 83080964 | 83080929 | ID=MS.gene065663.t1.exon4;Parent=MS.gene065663.t1 |
| chr1.4 | CDS | 83080929 | 83080964 | 83080929 | ID=cds.MS.gene065663.t1;Parent=MS.gene065663.t1 |
| chr1.4 | exon | 83080720 | 83080788 | 83080720 | ID=MS.gene065663.t1.exon5;Parent=MS.gene065663.t1 |
| chr1.4 | CDS | 83080720 | 83080788 | 83080720 | ID=cds.MS.gene065663.t1;Parent=MS.gene065663.t1 |
| Gene Sequence |
| Protein sequence |
