Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066330.t1 | XP_003615115.1 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 7.80E-156 | 559.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066330.t1 | Q9LME4 | 73.4 | 282 | 74 | 1 | 1 | 282 | 1 | 281 | 1.0e-116 | 421.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066330.t1 | A2Q6E4 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 5.6e-156 | 559.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051959 | MS.gene066330 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene051960 | MS.gene066330 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene052040 | MS.gene066330 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene066330 | 0.842211 | 2.97E-58 | -1.69E-46 |
| MS.gene052579 | MS.gene066330 | 0.838084 | 3.55E-57 | -1.69E-46 |
| MS.gene055150 | MS.gene066330 | 0.804468 | 2.13E-49 | -1.69E-46 |
| MS.gene05624 | MS.gene066330 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene057148 | MS.gene066330 | -0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene066330 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene059698 | MS.gene066330 | 0.810523 | 1.10E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene066330 | 0.831474 | 1.64E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066330.t1 | MTR_5g063940 | 99.645 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 0.0 | 580 |
| MS.gene066330.t1 | MTR_3g074610 | 81.560 | 282 | 52 | 0 | 1 | 282 | 1 | 282 | 2.04e-177 | 490 |
| MS.gene066330.t1 | MTR_5g063940 | 99.574 | 235 | 1 | 0 | 48 | 282 | 1 | 235 | 6.23e-174 | 479 |
| MS.gene066330.t1 | MTR_4g094208 | 75.532 | 282 | 64 | 1 | 1 | 282 | 1 | 277 | 1.54e-159 | 445 |
| MS.gene066330.t1 | MTR_2g008850 | 73.404 | 282 | 74 | 1 | 1 | 282 | 1 | 281 | 5.66e-151 | 423 |
| MS.gene066330.t1 | MTR_2g008850 | 78.298 | 235 | 51 | 0 | 48 | 282 | 1 | 235 | 4.85e-135 | 381 |
| MS.gene066330.t1 | MTR_2g078760 | 62.000 | 250 | 95 | 0 | 33 | 282 | 5 | 254 | 7.62e-110 | 318 |
| MS.gene066330.t1 | MTR_2g078760 | 60.377 | 265 | 104 | 1 | 19 | 282 | 69 | 333 | 1.76e-109 | 320 |
| MS.gene066330.t1 | MTR_8g463130 | 60.755 | 265 | 103 | 1 | 19 | 282 | 18 | 282 | 2.52e-109 | 318 |
| MS.gene066330.t1 | MTR_8g463130 | 62.400 | 250 | 94 | 0 | 33 | 282 | 5 | 254 | 1.03e-108 | 315 |
| MS.gene066330.t1 | MTR_4g094208 | 73.656 | 186 | 44 | 1 | 1 | 186 | 1 | 181 | 3.64e-98 | 287 |
| MS.gene066330.t1 | MTR_2g078760 | 61.991 | 221 | 83 | 1 | 19 | 238 | 69 | 289 | 1.95e-91 | 273 |
| MS.gene066330.t1 | MTR_4g094542 | 54.251 | 247 | 112 | 1 | 35 | 281 | 119 | 364 | 2.41e-87 | 265 |
| MS.gene066330.t1 | MTR_3g105730 | 41.901 | 284 | 158 | 5 | 1 | 281 | 1 | 280 | 4.06e-67 | 211 |
| MS.gene066330.t1 | MTR_1g014640 | 43.511 | 262 | 141 | 5 | 23 | 281 | 66 | 323 | 5.73e-67 | 212 |
| MS.gene066330.t1 | MTR_1g013400 | 43.511 | 262 | 141 | 5 | 23 | 281 | 66 | 323 | 5.73e-67 | 212 |
| MS.gene066330.t1 | MTR_3g105730 | 43.969 | 257 | 137 | 5 | 28 | 281 | 6 | 258 | 5.47e-66 | 207 |
| MS.gene066330.t1 | MTR_2g078760 | 59.649 | 171 | 68 | 1 | 19 | 188 | 69 | 239 | 3.15e-64 | 202 |
| MS.gene066330.t1 | MTR_1g115570 | 43.478 | 253 | 134 | 6 | 31 | 281 | 92 | 337 | 2.27e-61 | 197 |
| MS.gene066330.t1 | MTR_3g091060 | 40.149 | 269 | 154 | 5 | 16 | 281 | 76 | 340 | 1.32e-56 | 186 |
| MS.gene066330.t1 | MTR_5g071550 | 38.996 | 259 | 140 | 10 | 35 | 282 | 124 | 375 | 6.35e-45 | 156 |
| MS.gene066330.t1 | MTR_3g464650 | 37.692 | 260 | 142 | 11 | 36 | 282 | 63 | 315 | 6.85e-41 | 144 |
| MS.gene066330.t1 | MTR_3g464700 | 40.455 | 220 | 117 | 10 | 36 | 248 | 87 | 299 | 3.90e-38 | 137 |
| MS.gene066330.t1 | MTR_5g024340 | 37.118 | 229 | 126 | 5 | 65 | 281 | 123 | 345 | 7.25e-38 | 137 |
| MS.gene066330.t1 | MTR_1g086350 | 34.746 | 236 | 126 | 6 | 66 | 279 | 16 | 245 | 2.10e-37 | 134 |
| MS.gene066330.t1 | MTR_1g086350 | 34.583 | 240 | 129 | 6 | 62 | 279 | 98 | 331 | 9.45e-37 | 134 |
| MS.gene066330.t1 | MTR_1g086350 | 34.583 | 240 | 129 | 6 | 62 | 279 | 114 | 347 | 1.00e-36 | 134 |
| MS.gene066330.t1 | MTR_3g107880 | 35.019 | 257 | 140 | 8 | 48 | 282 | 37 | 288 | 2.12e-35 | 129 |
| MS.gene066330.t1 | MTR_3g107880 | 35.019 | 257 | 140 | 8 | 48 | 282 | 95 | 346 | 3.97e-35 | 130 |
| MS.gene066330.t1 | MTR_3g107880 | 35.019 | 257 | 140 | 8 | 48 | 282 | 94 | 345 | 4.15e-35 | 130 |
| MS.gene066330.t1 | MTR_4g123080 | 32.824 | 262 | 140 | 9 | 48 | 279 | 69 | 324 | 1.23e-33 | 125 |
| MS.gene066330.t1 | MTR_4g123080 | 32.824 | 262 | 140 | 9 | 48 | 279 | 87 | 342 | 1.59e-33 | 126 |
| MS.gene066330.t1 | MTR_5g071550 | 39.614 | 207 | 113 | 9 | 35 | 236 | 124 | 323 | 1.73e-33 | 125 |
| MS.gene066330.t1 | MTR_1g075730 | 32.743 | 226 | 131 | 4 | 58 | 281 | 71 | 277 | 4.16e-33 | 122 |
| MS.gene066330.t1 | MTR_1g075730 | 32.301 | 226 | 128 | 4 | 58 | 281 | 71 | 273 | 8.64e-33 | 121 |
| MS.gene066330.t1 | MTR_1g041475 | 35.398 | 226 | 121 | 4 | 58 | 281 | 71 | 273 | 1.34e-32 | 121 |
| MS.gene066330.t1 | MTR_4g116420 | 32.567 | 261 | 143 | 8 | 48 | 282 | 98 | 351 | 2.62e-32 | 122 |
| MS.gene066330.t1 | MTR_2g033000 | 32.061 | 262 | 142 | 8 | 48 | 279 | 74 | 329 | 1.45e-31 | 120 |
| MS.gene066330.t1 | MTR_6g081850 | 36.327 | 245 | 122 | 11 | 67 | 282 | 80 | 319 | 2.74e-31 | 119 |
| MS.gene066330.t1 | MTR_4g125810 | 36.822 | 258 | 116 | 8 | 66 | 282 | 253 | 504 | 4.65e-31 | 121 |
| MS.gene066330.t1 | MTR_3g105730 | 40.741 | 162 | 91 | 4 | 23 | 181 | 23 | 182 | 5.40e-31 | 115 |
| MS.gene066330.t1 | MTR_8g102550 | 32.686 | 309 | 157 | 11 | 17 | 282 | 89 | 389 | 6.47e-30 | 116 |
| MS.gene066330.t1 | MTR_4g007440 | 29.377 | 337 | 158 | 13 | 14 | 282 | 5 | 329 | 4.82e-29 | 113 |
| MS.gene066330.t1 | MTR_2g040500 | 33.750 | 320 | 136 | 12 | 35 | 282 | 221 | 536 | 3.98e-28 | 113 |
| MS.gene066330.t1 | MTR_1g050520 | 32.129 | 249 | 152 | 7 | 48 | 282 | 400 | 645 | 4.88e-28 | 113 |
| MS.gene066330.t1 | MTR_1g028300 | 34.400 | 250 | 137 | 7 | 56 | 282 | 135 | 380 | 3.02e-27 | 109 |
| MS.gene066330.t1 | MTR_5g080680 | 34.940 | 249 | 136 | 8 | 32 | 262 | 99 | 339 | 4.19e-27 | 108 |
| MS.gene066330.t1 | MTR_3g104710 | 33.969 | 262 | 129 | 7 | 62 | 282 | 282 | 540 | 6.56e-27 | 109 |
| MS.gene066330.t1 | MTR_1g015110 | 34.483 | 261 | 121 | 8 | 66 | 282 | 290 | 544 | 7.79e-27 | 109 |
| MS.gene066330.t1 | MTR_3g068200 | 31.081 | 296 | 154 | 8 | 30 | 282 | 88 | 376 | 1.93e-26 | 107 |
| MS.gene066330.t1 | MTR_1g014190 | 30.108 | 279 | 125 | 11 | 32 | 250 | 21 | 289 | 6.03e-26 | 105 |
| MS.gene066330.t1 | MTR_3g105880 | 27.900 | 319 | 151 | 13 | 33 | 282 | 22 | 330 | 7.05e-26 | 105 |
| MS.gene066330.t1 | MTR_1g014190 | 30.466 | 279 | 124 | 12 | 32 | 250 | 59 | 327 | 1.16e-25 | 105 |
| MS.gene066330.t1 | MTR_3g105880 | 29.856 | 278 | 125 | 12 | 33 | 250 | 22 | 289 | 1.34e-25 | 103 |
| MS.gene066330.t1 | MTR_7g100240 | 30.094 | 319 | 147 | 13 | 31 | 279 | 31 | 343 | 1.16e-22 | 96.3 |
| MS.gene066330.t1 | MTR_5g009370 | 32.900 | 231 | 135 | 9 | 35 | 249 | 53 | 279 | 3.69e-22 | 94.4 |
| MS.gene066330.t1 | MTR_4g118340 | 25.893 | 336 | 192 | 13 | 3 | 282 | 7 | 341 | 4.16e-22 | 95.1 |
| MS.gene066330.t1 | MTR_1g067210 | 27.848 | 316 | 158 | 12 | 31 | 279 | 36 | 348 | 4.45e-21 | 92.0 |
| MS.gene066330.t1 | MTR_6g087000 | 28.405 | 257 | 140 | 12 | 66 | 279 | 124 | 379 | 6.98e-21 | 92.8 |
| MS.gene066330.t1 | MTR_7g112490 | 38.202 | 178 | 85 | 9 | 126 | 279 | 201 | 377 | 1.12e-20 | 91.3 |
| MS.gene066330.t1 | MTR_7g112490 | 38.202 | 178 | 85 | 9 | 126 | 279 | 183 | 359 | 1.23e-20 | 90.9 |
| MS.gene066330.t1 | MTR_6g087000 | 28.405 | 257 | 140 | 12 | 66 | 279 | 124 | 379 | 1.57e-20 | 91.7 |
| MS.gene066330.t1 | MTR_1g083690 | 38.049 | 205 | 94 | 12 | 107 | 281 | 149 | 350 | 5.40e-20 | 88.6 |
| MS.gene066330.t1 | MTR_3g032700 | 30.742 | 283 | 140 | 12 | 35 | 271 | 39 | 311 | 1.30e-19 | 88.2 |
| MS.gene066330.t1 | MTR_1g116260 | 28.387 | 310 | 151 | 12 | 37 | 279 | 47 | 352 | 1.64e-19 | 87.8 |
| MS.gene066330.t1 | MTR_3g032660 | 30.389 | 283 | 141 | 12 | 35 | 271 | 39 | 311 | 5.33e-19 | 86.7 |
| MS.gene066330.t1 | MTR_7g090550 | 28.846 | 260 | 132 | 9 | 35 | 249 | 41 | 292 | 6.89e-19 | 86.3 |
| MS.gene066330.t1 | MTR_4g120410 | 37.073 | 205 | 100 | 11 | 103 | 281 | 151 | 352 | 9.08e-19 | 85.5 |
| MS.gene066330.t1 | MTR_3g491830 | 26.263 | 297 | 159 | 11 | 33 | 278 | 59 | 346 | 2.02e-18 | 84.7 |
| MS.gene066330.t1 | MTR_2g020970 | 27.444 | 266 | 151 | 11 | 58 | 282 | 78 | 342 | 3.09e-18 | 84.0 |
| MS.gene066330.t1 | MTR_1g110210 | 30.472 | 233 | 138 | 8 | 66 | 279 | 68 | 295 | 3.25e-18 | 83.6 |
| MS.gene066330.t1 | MTR_2g020970 | 27.444 | 266 | 151 | 11 | 58 | 282 | 78 | 342 | 4.13e-18 | 84.0 |
| MS.gene066330.t1 | MTR_5g071550 | 38.849 | 139 | 76 | 7 | 35 | 170 | 124 | 256 | 5.25e-18 | 82.4 |
| MS.gene066330.t1 | MTR_2g435550 | 38.537 | 205 | 97 | 12 | 103 | 281 | 138 | 339 | 9.45e-18 | 82.4 |
| MS.gene066330.t1 | MTR_2g435550 | 33.088 | 272 | 124 | 15 | 62 | 281 | 88 | 353 | 1.18e-17 | 82.0 |
| MS.gene066330.t1 | MTR_1g019760 | 28.755 | 233 | 142 | 8 | 66 | 279 | 65 | 292 | 3.58e-17 | 81.3 |
| MS.gene066330.t1 | MTR_2g435550 | 38.333 | 180 | 93 | 7 | 103 | 265 | 152 | 330 | 3.74e-17 | 80.9 |
| MS.gene066330.t1 | MTR_1g019760 | 28.755 | 233 | 142 | 8 | 66 | 279 | 65 | 292 | 4.57e-17 | 80.9 |
| MS.gene066330.t1 | MTR_7g090530 | 27.273 | 297 | 155 | 13 | 27 | 276 | 36 | 318 | 8.18e-17 | 80.1 |
| MS.gene066330.t1 | MTR_7g081020 | 28.467 | 274 | 135 | 10 | 66 | 279 | 76 | 348 | 9.31e-17 | 79.7 |
| MS.gene066330.t1 | MTR_7g112430 | 28.755 | 233 | 142 | 6 | 66 | 279 | 68 | 295 | 2.31e-16 | 79.0 |
| MS.gene066330.t1 | MTR_1g016620 | 31.799 | 239 | 122 | 10 | 54 | 252 | 55 | 292 | 3.88e-16 | 77.8 |
| MS.gene066330.t1 | MTR_1g083750 | 27.338 | 278 | 169 | 10 | 26 | 279 | 27 | 295 | 7.35e-16 | 77.4 |
| MS.gene066330.t1 | MTR_1g112840 | 28.626 | 262 | 132 | 10 | 37 | 249 | 48 | 303 | 7.53e-16 | 77.4 |
| MS.gene066330.t1 | MTR_7g081020 | 29.412 | 221 | 115 | 7 | 69 | 249 | 79 | 298 | 8.83e-16 | 76.3 |
| MS.gene066330.t1 | MTR_8g017240 | 39.106 | 179 | 83 | 8 | 126 | 281 | 164 | 339 | 1.34e-15 | 76.3 |
| MS.gene066330.t1 | MTR_7g070510 | 37.580 | 157 | 82 | 6 | 126 | 267 | 188 | 343 | 2.67e-15 | 75.9 |
| MS.gene066330.t1 | MTR_4g013295 | 31.200 | 250 | 127 | 10 | 62 | 267 | 74 | 322 | 2.95e-15 | 75.1 |
| MS.gene066330.t1 | MTR_5g080680 | 33.158 | 190 | 104 | 7 | 32 | 203 | 99 | 283 | 5.77e-15 | 73.6 |
| MS.gene066330.t1 | MTR_3g101540 | 28.085 | 235 | 141 | 9 | 66 | 279 | 66 | 293 | 8.09e-15 | 74.3 |
| MS.gene066330.t1 | MTR_3g101540 | 28.085 | 235 | 141 | 9 | 66 | 279 | 66 | 293 | 9.08e-15 | 74.3 |
| MS.gene066330.t1 | MTR_8g074930 | 27.206 | 272 | 135 | 10 | 69 | 279 | 82 | 351 | 1.02e-14 | 73.9 |
| MS.gene066330.t1 | MTR_1g106855 | 25.902 | 305 | 159 | 10 | 37 | 279 | 36 | 335 | 1.03e-14 | 73.9 |
| MS.gene066330.t1 | MTR_4g123080 | 36.667 | 120 | 61 | 3 | 170 | 279 | 115 | 229 | 1.39e-14 | 72.4 |
| MS.gene066330.t1 | MTR_2g090190 | 36.264 | 182 | 93 | 10 | 84 | 247 | 146 | 322 | 2.17e-14 | 73.2 |
| MS.gene066330.t1 | MTR_7g029240 | 31.933 | 238 | 136 | 12 | 64 | 279 | 66 | 299 | 9.50e-14 | 71.2 |
| MS.gene066330.t1 | MTR_7g080170 | 38.037 | 163 | 81 | 8 | 103 | 247 | 183 | 343 | 1.19e-13 | 71.2 |
| MS.gene066330.t1 | MTR_7g080170 | 38.037 | 163 | 81 | 8 | 103 | 247 | 75 | 235 | 1.21e-13 | 70.9 |
| MS.gene066330.t1 | MTR_5g005810 | 28.623 | 276 | 155 | 13 | 37 | 281 | 307 | 571 | 2.99e-13 | 70.1 |
| MS.gene066330.t1 | MTR_0015s0140 | 24.675 | 308 | 160 | 12 | 34 | 279 | 53 | 350 | 3.80e-12 | 66.2 |
| MS.gene066330.t1 | MTR_8g074930 | 28.390 | 236 | 107 | 9 | 104 | 279 | 6 | 239 | 8.12e-12 | 64.7 |
| MS.gene066330.t1 | MTR_1g083750 | 31.361 | 169 | 103 | 4 | 123 | 279 | 36 | 203 | 1.28e-11 | 64.3 |
| MS.gene066330.t1 | MTR_3g032590 | 27.615 | 239 | 111 | 8 | 99 | 279 | 116 | 350 | 1.51e-11 | 64.7 |
| MS.gene066330.t1 | MTR_1g071370 | 36.957 | 138 | 66 | 7 | 160 | 279 | 302 | 436 | 8.25e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066330.t1 | AT1G34750 | 73.050 | 282 | 76 | 0 | 1 | 282 | 1 | 282 | 2.97e-155 | 434 |
| MS.gene066330.t1 | AT1G34750 | 73.050 | 282 | 76 | 0 | 1 | 282 | 1 | 282 | 2.97e-155 | 434 |
| MS.gene066330.t1 | AT1G34750 | 73.050 | 282 | 76 | 0 | 1 | 282 | 1 | 282 | 2.97e-155 | 434 |
| MS.gene066330.t1 | AT1G22280 | 73.404 | 282 | 74 | 1 | 1 | 282 | 1 | 281 | 5.43e-151 | 423 |
| MS.gene066330.t1 | AT1G22280 | 71.875 | 288 | 74 | 2 | 1 | 282 | 1 | 287 | 2.52e-148 | 417 |
| MS.gene066330.t1 | AT1G78200 | 63.509 | 285 | 99 | 3 | 1 | 282 | 1 | 283 | 4.64e-132 | 375 |
| MS.gene066330.t1 | AT1G78200 | 63.509 | 285 | 99 | 3 | 1 | 282 | 1 | 283 | 4.64e-132 | 375 |
| MS.gene066330.t1 | AT1G78200 | 63.509 | 285 | 99 | 3 | 1 | 282 | 1 | 283 | 4.64e-132 | 375 |
| MS.gene066330.t1 | AT1G34750 | 70.040 | 247 | 72 | 1 | 1 | 247 | 1 | 245 | 4.47e-125 | 356 |
| MS.gene066330.t1 | AT2G20630 | 60.920 | 261 | 101 | 1 | 23 | 282 | 19 | 279 | 3.97e-114 | 330 |
| MS.gene066330.t1 | AT1G78200 | 66.387 | 238 | 77 | 2 | 48 | 282 | 1 | 238 | 1.62e-113 | 327 |
| MS.gene066330.t1 | AT1G78200 | 66.387 | 238 | 77 | 2 | 48 | 282 | 1 | 238 | 1.62e-113 | 327 |
| MS.gene066330.t1 | AT4G28400 | 60.385 | 260 | 102 | 1 | 24 | 282 | 2 | 261 | 2.36e-111 | 322 |
| MS.gene066330.t1 | AT3G15260 | 61.481 | 270 | 103 | 1 | 14 | 282 | 20 | 289 | 2.95e-111 | 323 |
| MS.gene066330.t1 | AT3G15260 | 61.481 | 270 | 103 | 1 | 14 | 282 | 20 | 289 | 2.95e-111 | 323 |
| MS.gene066330.t1 | AT2G20630 | 60.385 | 260 | 102 | 1 | 23 | 281 | 19 | 278 | 2.99e-111 | 323 |
| MS.gene066330.t1 | AT4G28400 | 59.623 | 265 | 106 | 1 | 19 | 282 | 19 | 283 | 3.24e-111 | 323 |
| MS.gene066330.t1 | AT1G22280 | 72.581 | 186 | 50 | 1 | 1 | 186 | 1 | 185 | 3.13e-92 | 271 |
| MS.gene066330.t1 | AT4G28400 | 59.729 | 221 | 88 | 1 | 19 | 238 | 19 | 239 | 1.34e-89 | 267 |
| MS.gene066330.t1 | AT2G34740 | 54.032 | 248 | 112 | 2 | 35 | 281 | 88 | 334 | 2.54e-85 | 259 |
| MS.gene066330.t1 | AT2G34740 | 54.146 | 205 | 92 | 2 | 35 | 238 | 102 | 305 | 3.93e-71 | 222 |
| MS.gene066330.t1 | AT2G34740 | 54.146 | 205 | 92 | 2 | 35 | 238 | 84 | 287 | 5.14e-71 | 221 |
| MS.gene066330.t1 | AT4G31750 | 44.275 | 262 | 139 | 5 | 23 | 281 | 22 | 279 | 1.52e-68 | 215 |
| MS.gene066330.t1 | AT4G31750 | 44.275 | 262 | 139 | 5 | 23 | 281 | 22 | 279 | 1.65e-68 | 215 |
| MS.gene066330.t1 | AT4G31750 | 44.275 | 262 | 139 | 5 | 23 | 281 | 22 | 279 | 1.65e-68 | 215 |
| MS.gene066330.t1 | AT5G10740 | 42.349 | 281 | 155 | 5 | 4 | 281 | 3 | 279 | 2.06e-68 | 216 |
| MS.gene066330.t1 | AT5G10740 | 42.349 | 281 | 155 | 5 | 4 | 281 | 3 | 279 | 2.06e-68 | 216 |
| MS.gene066330.t1 | AT5G24940 | 41.993 | 281 | 156 | 5 | 4 | 281 | 3 | 279 | 7.03e-67 | 215 |
| MS.gene066330.t1 | AT5G53140 | 38.931 | 262 | 153 | 5 | 24 | 282 | 91 | 348 | 7.00e-59 | 193 |
| MS.gene066330.t1 | AT5G53140 | 38.931 | 262 | 153 | 5 | 24 | 282 | 91 | 348 | 7.00e-59 | 193 |
| MS.gene066330.t1 | AT1G43900 | 41.270 | 252 | 140 | 6 | 33 | 281 | 122 | 368 | 6.91e-57 | 187 |
| MS.gene066330.t1 | AT2G33700 | 37.984 | 258 | 134 | 8 | 44 | 281 | 93 | 344 | 2.58e-42 | 149 |
| MS.gene066330.t1 | AT1G07160 | 40.081 | 247 | 130 | 8 | 48 | 281 | 135 | 376 | 3.77e-42 | 149 |
| MS.gene066330.t1 | AT2G40180 | 36.742 | 264 | 145 | 9 | 35 | 282 | 129 | 386 | 1.69e-40 | 144 |
| MS.gene066330.t1 | AT3G62260 | 35.950 | 242 | 128 | 6 | 62 | 281 | 23 | 259 | 1.98e-39 | 139 |
| MS.gene066330.t1 | AT2G30020 | 39.231 | 260 | 140 | 11 | 35 | 282 | 140 | 393 | 3.25e-39 | 141 |
| MS.gene066330.t1 | AT3G51470 | 35.600 | 250 | 138 | 9 | 48 | 281 | 41 | 283 | 4.04e-39 | 139 |
| MS.gene066330.t1 | AT3G62260 | 35.950 | 242 | 128 | 6 | 62 | 281 | 113 | 349 | 1.40e-38 | 139 |
| MS.gene066330.t1 | AT3G51470 | 35.600 | 250 | 138 | 9 | 48 | 281 | 85 | 327 | 1.40e-38 | 139 |
| MS.gene066330.t1 | AT3G62260 | 35.950 | 242 | 128 | 6 | 62 | 281 | 112 | 348 | 1.54e-38 | 139 |
| MS.gene066330.t1 | AT2G25620 | 36.293 | 259 | 132 | 9 | 48 | 279 | 102 | 354 | 1.72e-36 | 134 |
| MS.gene066330.t1 | AT2G25620 | 36.293 | 259 | 132 | 9 | 48 | 279 | 102 | 354 | 1.72e-36 | 134 |
| MS.gene066330.t1 | AT3G17250 | 31.290 | 310 | 166 | 9 | 12 | 281 | 91 | 393 | 1.27e-33 | 127 |
| MS.gene066330.t1 | AT1G48040 | 33.212 | 274 | 138 | 9 | 43 | 281 | 86 | 349 | 2.44e-32 | 123 |
| MS.gene066330.t1 | AT1G67820 | 35.268 | 224 | 135 | 5 | 48 | 266 | 97 | 315 | 3.96e-32 | 122 |
| MS.gene066330.t1 | AT5G57050 | 33.882 | 304 | 141 | 11 | 35 | 282 | 73 | 372 | 6.35e-32 | 122 |
| MS.gene066330.t1 | AT5G57050 | 33.882 | 304 | 141 | 11 | 35 | 282 | 113 | 412 | 7.77e-32 | 122 |
| MS.gene066330.t1 | AT1G67820 | 35.268 | 224 | 135 | 5 | 48 | 266 | 133 | 351 | 9.58e-32 | 122 |
| MS.gene066330.t1 | AT2G29380 | 33.108 | 296 | 146 | 12 | 31 | 282 | 74 | 361 | 1.46e-31 | 120 |
| MS.gene066330.t1 | AT4G26080 | 33.887 | 301 | 140 | 11 | 35 | 282 | 129 | 423 | 6.44e-31 | 120 |
| MS.gene066330.t1 | AT5G59220 | 35.391 | 243 | 128 | 7 | 30 | 249 | 107 | 343 | 5.11e-29 | 114 |
| MS.gene066330.t1 | AT2G40860 | 31.399 | 293 | 181 | 8 | 6 | 282 | 361 | 649 | 3.44e-28 | 114 |
| MS.gene066330.t1 | AT2G40860 | 31.399 | 293 | 181 | 8 | 6 | 282 | 263 | 551 | 3.68e-28 | 113 |
| MS.gene066330.t1 | AT5G51760 | 30.462 | 325 | 162 | 9 | 18 | 282 | 62 | 382 | 4.16e-28 | 111 |
| MS.gene066330.t1 | AT5G51760 | 30.818 | 318 | 156 | 9 | 25 | 282 | 99 | 412 | 6.88e-28 | 111 |
| MS.gene066330.t1 | AT1G07430 | 34.025 | 241 | 129 | 9 | 34 | 249 | 120 | 355 | 1.96e-27 | 110 |
| MS.gene066330.t1 | AT1G18030 | 32.245 | 245 | 132 | 11 | 67 | 282 | 110 | 349 | 7.85e-26 | 104 |
| MS.gene066330.t1 | AT4G31860 | 28.528 | 326 | 152 | 13 | 26 | 282 | 17 | 330 | 8.54e-26 | 104 |
| MS.gene066330.t1 | AT2G40860 | 31.071 | 280 | 173 | 8 | 6 | 269 | 361 | 636 | 2.27e-25 | 105 |
| MS.gene066330.t1 | AT3G23360 | 29.004 | 231 | 128 | 6 | 56 | 281 | 60 | 259 | 2.99e-25 | 101 |
| MS.gene066330.t1 | AT1G72770 | 32.103 | 271 | 124 | 9 | 66 | 282 | 238 | 502 | 8.13e-25 | 103 |
| MS.gene066330.t1 | AT1G72770 | 32.103 | 271 | 124 | 9 | 66 | 282 | 238 | 502 | 8.13e-25 | 103 |
| MS.gene066330.t1 | AT1G72770 | 32.103 | 271 | 124 | 9 | 66 | 282 | 238 | 502 | 8.13e-25 | 103 |
| MS.gene066330.t1 | AT4G31860 | 30.496 | 282 | 124 | 12 | 26 | 247 | 17 | 286 | 9.40e-25 | 100 |
| MS.gene066330.t1 | AT2G25070 | 27.900 | 319 | 151 | 13 | 33 | 282 | 22 | 330 | 1.52e-24 | 101 |
| MS.gene066330.t1 | AT2G25070 | 27.900 | 319 | 151 | 13 | 33 | 282 | 22 | 330 | 1.52e-24 | 101 |
| MS.gene066330.t1 | AT3G11410 | 32.245 | 245 | 132 | 8 | 34 | 249 | 104 | 343 | 1.59e-23 | 99.4 |
| MS.gene066330.t1 | AT1G17550 | 30.483 | 269 | 132 | 7 | 66 | 282 | 237 | 502 | 1.69e-23 | 100 |
| MS.gene066330.t1 | AT1G17550 | 30.483 | 269 | 132 | 7 | 66 | 282 | 237 | 502 | 1.69e-23 | 100 |
| MS.gene066330.t1 | AT2G20050 | 29.921 | 254 | 137 | 11 | 66 | 279 | 143 | 395 | 8.66e-23 | 98.6 |
| MS.gene066330.t1 | AT4G27800 | 29.667 | 300 | 145 | 13 | 33 | 278 | 58 | 345 | 9.13e-23 | 97.1 |
| MS.gene066330.t1 | AT2G20050 | 29.921 | 254 | 137 | 11 | 66 | 279 | 143 | 395 | 9.89e-23 | 98.2 |
| MS.gene066330.t1 | AT3G05640 | 40.223 | 179 | 83 | 7 | 126 | 281 | 172 | 349 | 5.62e-22 | 94.4 |
| MS.gene066330.t1 | AT3G05640 | 40.223 | 179 | 83 | 7 | 126 | 281 | 172 | 349 | 5.62e-22 | 94.4 |
| MS.gene066330.t1 | AT3G05640 | 40.223 | 179 | 83 | 7 | 126 | 281 | 172 | 349 | 5.62e-22 | 94.4 |
| MS.gene066330.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 116 | 282 | 65 | 254 | 8.12e-22 | 92.0 |
| MS.gene066330.t1 | AT3G16800 | 42.188 | 192 | 84 | 10 | 116 | 282 | 65 | 254 | 8.12e-22 | 92.0 |
| MS.gene066330.t1 | AT4G08260 | 31.250 | 224 | 116 | 7 | 65 | 282 | 18 | 209 | 8.30e-22 | 91.3 |
| MS.gene066330.t1 | AT4G31860 | 30.258 | 271 | 117 | 12 | 26 | 236 | 17 | 275 | 1.03e-21 | 92.4 |
| MS.gene066330.t1 | AT3G16800 | 42.487 | 193 | 82 | 11 | 116 | 282 | 160 | 349 | 2.59e-21 | 92.4 |
| MS.gene066330.t1 | AT3G16800 | 42.487 | 193 | 82 | 11 | 116 | 282 | 160 | 349 | 2.59e-21 | 92.4 |
| MS.gene066330.t1 | AT3G16800 | 42.487 | 193 | 82 | 11 | 116 | 282 | 160 | 349 | 2.59e-21 | 92.4 |
| MS.gene066330.t1 | AT5G27930 | 39.326 | 178 | 82 | 8 | 126 | 279 | 177 | 352 | 3.95e-21 | 92.0 |
| MS.gene066330.t1 | AT5G27930 | 39.326 | 178 | 82 | 8 | 126 | 279 | 177 | 352 | 3.95e-21 | 92.0 |
| MS.gene066330.t1 | AT1G18030 | 33.163 | 196 | 102 | 8 | 67 | 238 | 110 | 300 | 7.10e-21 | 90.5 |
| MS.gene066330.t1 | AT3G12620 | 29.545 | 308 | 150 | 12 | 37 | 279 | 50 | 355 | 1.26e-20 | 90.9 |
| MS.gene066330.t1 | AT3G12620 | 29.545 | 308 | 150 | 12 | 37 | 279 | 50 | 355 | 1.26e-20 | 90.9 |
| MS.gene066330.t1 | AT1G68410 | 32.051 | 234 | 133 | 10 | 66 | 279 | 73 | 300 | 2.67e-20 | 90.5 |
| MS.gene066330.t1 | AT1G68410 | 32.051 | 234 | 133 | 10 | 66 | 279 | 73 | 300 | 2.67e-20 | 90.5 |
| MS.gene066330.t1 | AT1G68410 | 32.051 | 234 | 133 | 10 | 66 | 279 | 73 | 300 | 2.67e-20 | 90.5 |
| MS.gene066330.t1 | AT1G68410 | 32.051 | 234 | 133 | 10 | 66 | 279 | 73 | 300 | 2.67e-20 | 90.5 |
| MS.gene066330.t1 | AT4G27800 | 29.682 | 283 | 138 | 13 | 33 | 266 | 58 | 328 | 3.91e-20 | 89.0 |
| MS.gene066330.t1 | AT4G27800 | 29.181 | 281 | 140 | 12 | 33 | 266 | 58 | 326 | 4.30e-20 | 88.6 |
| MS.gene066330.t1 | AT5G02760 | 31.679 | 262 | 118 | 10 | 37 | 247 | 39 | 290 | 6.30e-20 | 89.0 |
| MS.gene066330.t1 | AT1G09160 | 31.330 | 233 | 136 | 8 | 66 | 279 | 68 | 295 | 2.96e-19 | 87.4 |
| MS.gene066330.t1 | AT1G09160 | 31.330 | 233 | 136 | 8 | 66 | 279 | 68 | 295 | 2.96e-19 | 87.4 |
| MS.gene066330.t1 | AT3G55050 | 26.129 | 310 | 158 | 10 | 37 | 279 | 51 | 356 | 1.20e-18 | 85.1 |
| MS.gene066330.t1 | AT3G55050 | 26.129 | 310 | 158 | 10 | 37 | 279 | 51 | 356 | 1.20e-18 | 85.1 |
| MS.gene066330.t1 | AT3G27140 | 30.864 | 243 | 106 | 9 | 48 | 282 | 1 | 189 | 1.53e-18 | 83.2 |
| MS.gene066330.t1 | AT1G47380 | 27.839 | 273 | 164 | 11 | 26 | 279 | 33 | 291 | 2.38e-18 | 84.7 |
| MS.gene066330.t1 | AT3G51370 | 28.261 | 276 | 133 | 10 | 66 | 279 | 79 | 351 | 6.65e-18 | 83.2 |
| MS.gene066330.t1 | AT3G51370 | 28.261 | 276 | 133 | 10 | 66 | 279 | 79 | 351 | 6.65e-18 | 83.2 |
| MS.gene066330.t1 | AT5G66080 | 27.675 | 271 | 135 | 8 | 69 | 279 | 85 | 354 | 5.48e-17 | 80.5 |
| MS.gene066330.t1 | AT5G06750 | 28.522 | 291 | 142 | 11 | 37 | 273 | 57 | 335 | 6.30e-17 | 80.5 |
| MS.gene066330.t1 | AT5G06750 | 28.522 | 291 | 142 | 11 | 37 | 273 | 57 | 335 | 6.30e-17 | 80.5 |
| MS.gene066330.t1 | AT5G01700 | 38.217 | 157 | 81 | 6 | 126 | 267 | 112 | 267 | 1.35e-16 | 79.0 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 151 | 328 | 2.05e-16 | 79.0 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 151 | 328 | 2.05e-16 | 79.0 |
| MS.gene066330.t1 | AT1G79630 | 37.640 | 178 | 88 | 7 | 126 | 281 | 222 | 398 | 2.24e-16 | 79.3 |
| MS.gene066330.t1 | AT1G79630 | 37.640 | 178 | 88 | 7 | 126 | 281 | 218 | 394 | 2.52e-16 | 79.0 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 111 | 288 | 2.55e-16 | 78.6 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 111 | 288 | 2.55e-16 | 78.6 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 111 | 288 | 2.55e-16 | 78.6 |
| MS.gene066330.t1 | AT1G79630 | 37.430 | 179 | 89 | 7 | 125 | 281 | 111 | 288 | 2.55e-16 | 78.6 |
| MS.gene066330.t1 | AT5G01700 | 38.217 | 157 | 81 | 6 | 126 | 267 | 161 | 316 | 2.64e-16 | 78.6 |
| MS.gene066330.t1 | AT4G38520 | 25.566 | 309 | 165 | 9 | 37 | 281 | 48 | 355 | 3.77e-16 | 78.2 |
| MS.gene066330.t1 | AT4G38520 | 25.566 | 309 | 165 | 9 | 37 | 281 | 48 | 355 | 3.77e-16 | 78.2 |
| MS.gene066330.t1 | AT1G16220 | 36.517 | 178 | 90 | 7 | 126 | 281 | 199 | 375 | 2.99e-15 | 75.9 |
| MS.gene066330.t1 | AT3G17090 | 26.537 | 309 | 150 | 11 | 37 | 279 | 59 | 356 | 3.18e-15 | 75.5 |
| MS.gene066330.t1 | AT4G03415 | 37.634 | 186 | 92 | 10 | 84 | 247 | 148 | 331 | 4.13e-15 | 75.5 |
| MS.gene066330.t1 | AT4G03415 | 37.634 | 186 | 92 | 10 | 84 | 247 | 148 | 331 | 4.13e-15 | 75.5 |
| MS.gene066330.t1 | AT4G03415 | 37.634 | 186 | 92 | 10 | 84 | 247 | 148 | 331 | 4.13e-15 | 75.5 |
| MS.gene066330.t1 | AT5G59220 | 32.143 | 196 | 104 | 7 | 30 | 202 | 107 | 296 | 7.62e-15 | 73.6 |
| MS.gene066330.t1 | AT2G05050 | 42.424 | 99 | 51 | 2 | 190 | 282 | 92 | 190 | 1.63e-14 | 70.9 |
| MS.gene066330.t1 | AT3G51370 | 28.936 | 235 | 107 | 8 | 104 | 279 | 33 | 266 | 2.24e-14 | 72.0 |
| MS.gene066330.t1 | AT3G17090 | 26.641 | 259 | 133 | 9 | 37 | 249 | 59 | 306 | 2.54e-14 | 72.4 |
| MS.gene066330.t1 | AT3G02750 | 38.037 | 163 | 81 | 7 | 103 | 247 | 192 | 352 | 9.73e-14 | 71.2 |
| MS.gene066330.t1 | AT3G02750 | 38.037 | 163 | 81 | 7 | 103 | 247 | 192 | 352 | 9.73e-14 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.21e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.21e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.21e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.21e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.33e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.33e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.38e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.39e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.44e-13 | 71.2 |
| MS.gene066330.t1 | AT3G63340 | 26.966 | 267 | 124 | 10 | 76 | 282 | 191 | 446 | 1.68e-13 | 70.9 |
| MS.gene066330.t1 | AT5G36250 | 35.165 | 182 | 100 | 8 | 103 | 267 | 183 | 363 | 2.57e-13 | 70.1 |
| MS.gene066330.t1 | AT2G40860 | 28.033 | 239 | 153 | 7 | 6 | 229 | 361 | 595 | 4.34e-13 | 69.7 |
| MS.gene066330.t1 | AT3G63320 | 29.167 | 216 | 92 | 8 | 126 | 282 | 85 | 298 | 4.86e-13 | 68.9 |
| MS.gene066330.t1 | AT5G57050 | 31.156 | 199 | 103 | 9 | 35 | 203 | 113 | 307 | 1.01e-12 | 67.8 |
| MS.gene066330.t1 | AT5G26010 | 29.515 | 227 | 98 | 10 | 66 | 247 | 73 | 282 | 1.03e-12 | 67.8 |
| MS.gene066330.t1 | AT5G66080 | 28.085 | 235 | 109 | 7 | 104 | 279 | 17 | 250 | 1.06e-12 | 67.4 |
| MS.gene066330.t1 | AT3G63320 | 29.167 | 216 | 92 | 8 | 126 | 282 | 168 | 381 | 1.70e-12 | 67.4 |
| MS.gene066330.t1 | AT3G63340 | 34.752 | 141 | 75 | 5 | 158 | 282 | 340 | 479 | 1.79e-12 | 67.8 |
| MS.gene066330.t1 | AT5G06750 | 32.461 | 191 | 81 | 6 | 126 | 273 | 68 | 253 | 7.49e-12 | 65.1 |
| MS.gene066330.t1 | AT5G27930 | 40.945 | 127 | 56 | 7 | 126 | 235 | 177 | 301 | 2.28e-11 | 63.5 |
Find 54 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTACTTGCACAAAAT+TGG | 0.219610 | 5.4:-49715814 | None:intergenic |
| TCTTTCAAATAGTTCTGATT+TGG | 0.235348 | 5.4:+49716317 | MS.gene066330:CDS |
| CTTTCAAATAGTTCTGATTT+GGG | 0.264270 | 5.4:+49716318 | MS.gene066330:CDS |
| GGCGATGTCCCTAGAGTAAA+TGG | 0.299500 | 5.4:+49717640 | MS.gene066330:intron |
| CTGGCTGTTGCTCGTGCATT+TGG | 0.315037 | 5.4:+49717667 | MS.gene066330:CDS |
| CATGAAGGATCAATAAAGTA+TGG | 0.340178 | 5.4:+49715738 | MS.gene066330:CDS |
| GCAAGTACAAGGAAAAGAAT+TGG | 0.366641 | 5.4:+49715824 | MS.gene066330:CDS |
| TGCTTCAGCTGTTAATTGCT+TGG | 0.366726 | 5.4:-49718126 | None:intergenic |
| TCATCATGCAGCACCGGAAA+AGG | 0.368195 | 5.4:+49715708 | MS.gene066330:CDS |
| TAATCAATGGTCAAATGTTA+TGG | 0.372279 | 5.4:+49716373 | MS.gene066330:CDS |
| ATATATCTTGTGTTGTGGTT+AGG | 0.380847 | 5.4:+49718171 | MS.gene066330:CDS |
| TGCTATTTACGATGGCCACT+TGG | 0.387334 | 5.4:+49715854 | MS.gene066330:CDS |
| CGAGCGGTTCTTTCAAGAAA+AGG | 0.395093 | 5.4:+49716417 | MS.gene066330:CDS |
| CTTGTGTTGTGGTTAGGTTT+AGG | 0.413014 | 5.4:+49718177 | MS.gene066330:CDS |
| CAAGTACAAGGAAAAGAATT+GGG | 0.420606 | 5.4:+49715825 | MS.gene066330:CDS |
| GATTGGCTCGCCCTTTCACT+AGG | 0.421592 | 5.4:-49715767 | None:intergenic |
| CCCTAGAGTAAATGGACAAC+TGG | 0.433175 | 5.4:+49717648 | MS.gene066330:CDS |
| CGAGGCATCATTGAGAATAA+AGG | 0.442863 | 5.4:+49716483 | MS.gene066330:CDS |
| TTCTTGCAAGTGATGGACTT+TGG | 0.443247 | 5.4:+49717770 | MS.gene066330:CDS |
| ATGATGCCTCGTTCTGTGTT+AGG | 0.446979 | 5.4:-49716471 | None:intergenic |
| GCTATTTACGATGGCCACTT+GGG | 0.451919 | 5.4:+49715855 | MS.gene066330:CDS |
| ACATCAGTACTATGTACATC+GGG | 0.454693 | 5.4:-49717724 | None:intergenic |
| AAATACCTCCTTTAGAATGT+TGG | 0.457459 | 5.4:-49715916 | None:intergenic |
| GTAATCCTCCATCGGATGAT+TGG | 0.469421 | 5.4:-49715784 | None:intergenic |
| TTTCTAATTCTTGCAAGTGA+TGG | 0.473579 | 5.4:+49717763 | MS.gene066330:CDS |
| AATTGCTTGGCTGCTTTCAG+TGG | 0.490672 | 5.4:-49718113 | None:intergenic |
| CATCATGCAGCACCGGAAAA+GGG | 0.498344 | 5.4:+49715709 | MS.gene066330:CDS |
| AATAGTTCTGATTTGGGGCG+TGG | 0.501689 | 5.4:+49716324 | MS.gene066330:CDS |
| GCCAGTTGTCCATTTACTCT+AGG | 0.508307 | 5.4:-49717649 | None:intergenic |
| TGCAAGTGATGGACTTTGGA+AGG | 0.511963 | 5.4:+49717774 | MS.gene066330:CDS |
| AGCATATCTGAACACAGATC+AGG | 0.521538 | 5.4:+49716290 | MS.gene066330:CDS |
| CTATTTACGATGGCCACTTG+GGG | 0.537349 | 5.4:+49715856 | MS.gene066330:CDS |
| GTTACTGCAATATTAATCAA+TGG | 0.538044 | 5.4:+49716360 | MS.gene066330:CDS |
| TATGGATTCACCCTAGTGAA+AGG | 0.544774 | 5.4:+49715756 | MS.gene066330:CDS |
| CCAGTTGTCCATTTACTCTA+GGG | 0.544818 | 5.4:-49717648 | None:intergenic |
| ATGGATTCACCCTAGTGAAA+GGG | 0.552190 | 5.4:+49715757 | MS.gene066330:CDS |
| GGTTTGTTTGCTATTTACGA+TGG | 0.579056 | 5.4:+49715846 | MS.gene066330:CDS |
| TTTCAAATAGTTCTGATTTG+GGG | 0.579147 | 5.4:+49716319 | MS.gene066330:CDS |
| ATTGGCTCGCCCTTTCACTA+GGG | 0.585955 | 5.4:-49715766 | None:intergenic |
| TACATCAGTACTATGTACAT+CGG | 0.588150 | 5.4:-49717725 | None:intergenic |
| ACGCGTTCATCATGCAGCAC+CGG | 0.596075 | 5.4:+49715702 | MS.gene066330:CDS |
| AGTTCTGATTTGGGGCGTGG+TGG | 0.597508 | 5.4:+49716327 | MS.gene066330:CDS |
| GCAACGTGGTAATCCTCCAT+CGG | 0.603187 | 5.4:-49715792 | None:intergenic |
| ATGTTATGGACAGCTAATGT+CGG | 0.606535 | 5.4:+49716387 | MS.gene066330:CDS |
| TCAGGTAATGGCAAATCAAG+AGG | 0.609971 | 5.4:+49718061 | MS.gene066330:intron |
| GGCATCATTGAGAATAAAGG+TGG | 0.625564 | 5.4:+49716486 | MS.gene066330:CDS |
| AGATGATATATCTTGTGTTG+TGG | 0.625754 | 5.4:+49718166 | MS.gene066330:CDS |
| TATTTACGATGGCCACTTGG+GGG | 0.638259 | 5.4:+49715857 | MS.gene066330:CDS |
| AGGGCGAGCCAATCATCCGA+TGG | 0.643114 | 5.4:+49715776 | MS.gene066330:CDS |
| GCGAGCCAATCATCCGATGG+AGG | 0.648560 | 5.4:+49715779 | MS.gene066330:CDS |
| CATGAGCCTAACACAGAACG+AGG | 0.661928 | 5.4:+49716465 | MS.gene066330:CDS |
| CTTGCACAAAATTGGCAACG+TGG | 0.667970 | 5.4:-49715806 | None:intergenic |
| CATCAGTACTATGTACATCG+GGG | 0.756382 | 5.4:-49717723 | None:intergenic |
| TAATGTCGGAGATTCACGAG+CGG | 0.779182 | 5.4:+49716401 | MS.gene066330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCAAAAAATTAAAACAAA+AGG | - | chr5.4:49715316-49715335 | None:intergenic | 15.0% |
| !! | TAAAAAAATGAAAAAAAGAG+AGG | - | chr5.4:49717091-49717110 | None:intergenic | 15.0% |
| !!! | AAAGAAACTATATTTTTTGT+TGG | + | chr5.4:49716647-49716666 | MS.gene066330:intron | 15.0% |
| !!! | AAATTTCACATTTTTCATAT+TGG | + | chr5.4:49714995-49715014 | MS.gene066330:intron | 15.0% |
| !!! | AATTTCACATTTTTCATATT+GGG | + | chr5.4:49714996-49715015 | MS.gene066330:intron | 15.0% |
| !!! | ATACTTATGATTTTTATCAT+AGG | + | chr5.4:49716230-49716249 | MS.gene066330:intron | 15.0% |
| !!! | ATTATGTTTTAATCTCTTAA+TGG | + | chr5.4:49715395-49715414 | MS.gene066330:intron | 15.0% |
| !!! | CAATGTAAATATTTTTTACA+CGG | + | chr5.4:49717353-49717372 | MS.gene066330:intron | 15.0% |
| !!! | TACTTATGATTTTTATCATA+GGG | + | chr5.4:49716231-49716250 | MS.gene066330:intron | 15.0% |
| !!! | TTCTTTAAAAACAAAGATTA+TGG | - | chr5.4:49715523-49715542 | None:intergenic | 15.0% |
| !! | AAAAATGTCAAAGATTAACT+TGG | - | chr5.4:49714789-49714808 | None:intergenic | 20.0% |
| !! | AAAATGTCAAAGATTAACTT+GGG | - | chr5.4:49714788-49714807 | None:intergenic | 20.0% |
| !! | ATGGAATAATAATACTAAGA+GGG | - | chr5.4:49715106-49715125 | None:intergenic | 20.0% |
| !! | CGTGTAAAAAATATTTACAT+TGG | - | chr5.4:49717355-49717374 | None:intergenic | 20.0% |
| !! | GTAATTTATTGTGTTACATT+TGG | + | chr5.4:49715215-49715234 | MS.gene066330:intron | 20.0% |
| !! | TTAACATTTGAATTCAGTTA+TGG | - | chr5.4:49716729-49716748 | None:intergenic | 20.0% |
| !!! | ATCTTTGACATTTTTCATTT+TGG | + | chr5.4:49714794-49714813 | MS.gene066330:intron | 20.0% |
| !!! | ATTTCACATTTTTCATATTG+GGG | + | chr5.4:49714997-49715016 | MS.gene066330:intron | 20.0% |
| !!! | TAATCCTTAATGTTTTGTTT+TGG | + | chr5.4:49715264-49715283 | MS.gene066330:intron | 20.0% |
| !!! | TATTGTTGTTGAAATAACTT+AGG | + | chr5.4:49715548-49715567 | MS.gene066330:intron | 20.0% |
| !!! | TATTTGAAATTATCAGTGAA+TGG | - | chr5.4:49717176-49717195 | None:intergenic | 20.0% |
| !!! | TCTTTGACATTTTTCATTTT+GGG | + | chr5.4:49714795-49714814 | MS.gene066330:intron | 20.0% |
| !!! | TGTTTTTGATAAAACTGAAT+TGG | - | chr5.4:49714695-49714714 | None:intergenic | 20.0% |
| !!! | TTTTACCAGTTTTTTGTTAT+TGG | + | chr5.4:49714592-49714611 | MS.gene066330:intron | 20.0% |
| ! | AAATTACAAGAAATACCAAG+AGG | - | chr5.4:49715202-49715221 | None:intergenic | 25.0% |
| ! | AATTACAAGAAATACCAAGA+GGG | - | chr5.4:49715201-49715220 | None:intergenic | 25.0% |
| ! | ATGTGAAATTTAATGAAGCA+CGG | - | chr5.4:49714986-49715005 | None:intergenic | 25.0% |
| ! | CAATTGTCTTTGATTATGTT+GGG | + | chr5.4:49715145-49715164 | MS.gene066330:intron | 25.0% |
| ! | CAGTTAAGTAACAAGTATTT+GGG | - | chr5.4:49717814-49717833 | None:intergenic | 25.0% |
| ! | CATGGAATAATAATACTAAG+AGG | - | chr5.4:49715107-49715126 | None:intergenic | 25.0% |
| ! | CATTAGATATGATTCATGAT+AGG | + | chr5.4:49716916-49716935 | MS.gene066330:intron | 25.0% |
| ! | GTTACTGCAATATTAATCAA+TGG | + | chr5.4:49716360-49716379 | MS.gene066330:CDS | 25.0% |
| ! | TAATCAATGGTCAAATGTTA+TGG | + | chr5.4:49716373-49716392 | MS.gene066330:CDS | 25.0% |
| ! | TAGATCTTAAAATACATACC+AGG | - | chr5.4:49715447-49715466 | None:intergenic | 25.0% |
| ! | TCAAACCAATAACAAAAAAC+TGG | - | chr5.4:49714600-49714619 | None:intergenic | 25.0% |
| ! | TCAATTGTCTTTGATTATGT+TGG | + | chr5.4:49715144-49715163 | MS.gene066330:intron | 25.0% |
| ! | TCAGTTAAGTAACAAGTATT+TGG | - | chr5.4:49717815-49717834 | None:intergenic | 25.0% |
| ! | TGTGTAAAAAATATTTACGC+TGG | - | chr5.4:49717429-49717448 | None:intergenic | 25.0% |
| ! | TTCAATGCAATTATAAGTGT+CGG | - | chr5.4:49714894-49714913 | None:intergenic | 25.0% |
| ! | TTTATTGTGTTACATTTGGT+TGG | + | chr5.4:49715219-49715238 | MS.gene066330:intron | 25.0% |
| !! | AGATTTTTCTGTAAGTATGA+AGG | - | chr5.4:49715891-49715910 | None:intergenic | 25.0% |
| !! | CTTTGACATTTTTCATTTTG+GGG | + | chr5.4:49714796-49714815 | MS.gene066330:intron | 25.0% |
| !! | TAGTAGAAAAAAGCTTTAGT+TGG | + | chr5.4:49716972-49716991 | MS.gene066330:intron | 25.0% |
| !! | TCTATTTTCCAACATTCTAA+AGG | + | chr5.4:49715908-49715927 | MS.gene066330:CDS | 25.0% |
| !! | TTCTTGTTTGTTGAATTTGA+AGG | + | chr5.4:49714501-49714520 | MS.gene066330:intron | 25.0% |
| !!! | AACTAAAGCTTTTTTCTACT+AGG | - | chr5.4:49716973-49716992 | None:intergenic | 25.0% |
| !!! | AGGCAATTCAATTTTTTGTA+TGG | + | chr5.4:49714521-49714540 | MS.gene066330:intron | 25.0% |
| !!! | AGTTTTTTGTTATTGGTTTG+AGG | + | chr5.4:49714599-49714618 | MS.gene066330:intron | 25.0% |
| !!! | ATTTGTGTTGATTTTTTGTC+AGG | + | chr5.4:49715033-49715052 | MS.gene066330:intron | 25.0% |
| !!! | CTTTCAAATAGTTCTGATTT+GGG | + | chr5.4:49716318-49716337 | MS.gene066330:CDS | 25.0% |
| !!! | GTCACAAATCATTACTTTTT+CGG | + | chr5.4:49715603-49715622 | MS.gene066330:intron | 25.0% |
| !!! | GTTTTTTGTTATTGGTTTGA+GGG | + | chr5.4:49714600-49714619 | MS.gene066330:intron | 25.0% |
| !!! | TAAGTTGTTTCTTTGTTACT+AGG | - | chr5.4:49717265-49717284 | None:intergenic | 25.0% |
| !!! | TCAGATTCTCATTTTTTGTT+TGG | + | chr5.4:49716584-49716603 | MS.gene066330:intron | 25.0% |
| !!! | TCTTTCAAATAGTTCTGATT+TGG | + | chr5.4:49716317-49716336 | MS.gene066330:CDS | 25.0% |
| !!! | TTAGAATTTTGATAAAGCAG+AGG | + | chr5.4:49716090-49716109 | MS.gene066330:intron | 25.0% |
| !!! | TTTAAAGTCTTCGTTTTCTA+AGG | + | chr5.4:49714445-49714464 | MS.gene066330:CDS | 25.0% |
| !!! | TTTCAAATAGTTCTGATTTG+GGG | + | chr5.4:49716319-49716338 | MS.gene066330:CDS | 25.0% |
| !!! | TTTGTGTTGATTTTTTGTCA+GGG | + | chr5.4:49715034-49715053 | MS.gene066330:intron | 25.0% |
| !!! | TTTTGATTAAGGATGATGAT+TGG | + | chr5.4:49714548-49714567 | MS.gene066330:intron | 25.0% |
| AGATGATATATCTTGTGTTG+TGG | + | chr5.4:49718166-49718185 | MS.gene066330:CDS | 30.0% | |
| AGGACCAAAACAAAACATTA+AGG | - | chr5.4:49715271-49715290 | None:intergenic | 30.0% | |
| ATACCAAGATACACTATACA+TGG | - | chr5.4:49715125-49715144 | None:intergenic | 30.0% | |
| ATATATCTTGTGTTGTGGTT+AGG | + | chr5.4:49718171-49718190 | MS.gene066330:CDS | 30.0% | |
| ATTCCATGTATAGTGTATCT+TGG | + | chr5.4:49715119-49715138 | MS.gene066330:intron | 30.0% | |
| CAAGTACAAGGAAAAGAATT+GGG | + | chr5.4:49715825-49715844 | MS.gene066330:CDS | 30.0% | |
| CATGAAGGATCAATAAAGTA+TGG | + | chr5.4:49715738-49715757 | MS.gene066330:CDS | 30.0% | |
| CCAAAACATTCAGAAACATT+AGG | - | chr5.4:49715291-49715310 | None:intergenic | 30.0% | |
| GTATGAAAATTGATGAAGCA+CGG | + | chr5.4:49714835-49714854 | MS.gene066330:intron | 30.0% | |
| TAAGTAACAAGTATTTGGGT+TGG | - | chr5.4:49717810-49717829 | None:intergenic | 30.0% | |
| TACATCAGTACTATGTACAT+CGG | - | chr5.4:49717728-49717747 | None:intergenic | 30.0% | |
| TCGTAATCGTCAAATCATTA+AGG | + | chr5.4:49717384-49717403 | MS.gene066330:intron | 30.0% | |
| TCTCAAATTATTAGCAGTGT+CGG | + | chr5.4:49714925-49714944 | MS.gene066330:intron | 30.0% | |
| TTTATGGTTGTGGTTTCAAT+TGG | + | chr5.4:49717026-49717045 | MS.gene066330:intron | 30.0% | |
| TTTCAAAACAGCAATCAGTT+TGG | - | chr5.4:49716056-49716075 | None:intergenic | 30.0% | |
| TTTCAACACCACAATAACAT+TGG | + | chr5.4:49717595-49717614 | MS.gene066330:intron | 30.0% | |
| TTTCTAATTCTTGCAAGTGA+TGG | + | chr5.4:49717763-49717782 | MS.gene066330:CDS | 30.0% | |
| ! | ACAATTTCATGGACTGAATT+GGG | - | chr5.4:49715972-49715991 | None:intergenic | 30.0% |
| ! | ATTGTGATGTTGTTTGTTAC+AGG | + | chr5.4:49717290-49717309 | MS.gene066330:intron | 30.0% |
| ! | CTAATGTTTGCTGAATAGTT+TGG | + | chr5.4:49715362-49715381 | MS.gene066330:intron | 30.0% |
| ! | GTGCTTCATCAATTTTCATA+CGG | - | chr5.4:49714836-49714855 | None:intergenic | 30.0% |
| ! | TCTACTATCTTTTGCACAAT+AGG | - | chr5.4:49716808-49716827 | None:intergenic | 30.0% |
| ! | TGCTTCATCAATTTTCATAC+GGG | - | chr5.4:49714835-49714854 | None:intergenic | 30.0% |
| ! | TTCATGATTTTTCCCTTTTC+CGG | - | chr5.4:49715724-49715743 | None:intergenic | 30.0% |
| ! | TTGCTGAATAGTTTGGAATT+TGG | + | chr5.4:49715369-49715388 | MS.gene066330:intron | 30.0% |
| ! | TTTAAGATCTATCACCATGT+AGG | + | chr5.4:49715456-49715475 | MS.gene066330:intron | 30.0% |
| ! | TTTATCATAGGGTGCATTTT+GGG | + | chr5.4:49716242-49716261 | MS.gene066330:intron | 30.0% |
| ! | TTTTATCATAGGGTGCATTT+TGG | + | chr5.4:49716241-49716260 | MS.gene066330:intron | 30.0% |
| !! | AAATACCTCCTTTAGAATGT+TGG | - | chr5.4:49715919-49715938 | None:intergenic | 30.0% |
| !! | ATTTTCCAACATTCTAAAGG+AGG | + | chr5.4:49715911-49715930 | MS.gene066330:CDS | 30.0% |
| !! | CCTAATGTTTCTGAATGTTT+TGG | + | chr5.4:49715288-49715307 | MS.gene066330:intron | 30.0% |
| !!! | TAAAGCTTTTTTCTACTAGG+CGG | - | chr5.4:49716970-49716989 | None:intergenic | 30.0% |
| !!! | TGTATGGTGTGTTTTGATTA+AGG | + | chr5.4:49714537-49714556 | MS.gene066330:intron | 30.0% |
| !!! | TTTTTAAGTACCTGGAATGT+TGG | - | chr5.4:49716520-49716539 | None:intergenic | 30.0% |
| AACATGCACTAGAGCATATT+TGG | + | chr5.4:49717964-49717983 | MS.gene066330:intron | 35.0% | |
| AATATGCTCTAGTGCATGTT+TGG | - | chr5.4:49717964-49717983 | None:intergenic | 35.0% | |
| AATGATCTCTGGTATTTCTC+AGG | + | chr5.4:49717619-49717638 | MS.gene066330:intron | 35.0% | |
| AATTGGTTATAAGCAGTCCA+TGG | + | chr5.4:49717043-49717062 | MS.gene066330:intron | 35.0% | |
| AATTTAATGAAGCACGGACA+CGG | - | chr5.4:49714980-49714999 | None:intergenic | 35.0% | |
| ACATCAGTACTATGTACATC+GGG | - | chr5.4:49717727-49717746 | None:intergenic | 35.0% | |
| AGAGGATCTGATTGATACAA+AGG | + | chr5.4:49716108-49716127 | MS.gene066330:intron | 35.0% | |
| ATAACATTGGCAATGATCTC+TGG | + | chr5.4:49717608-49717627 | MS.gene066330:intron | 35.0% | |
| ATGTTATGGACAGCTAATGT+CGG | + | chr5.4:49716387-49716406 | MS.gene066330:CDS | 35.0% | |
| CATATGCGAAAATCAGGTAA+TGG | + | chr5.4:49718049-49718068 | MS.gene066330:intron | 35.0% | |
| GAGGATCTGATTGATACAAA+GGG | + | chr5.4:49716109-49716128 | MS.gene066330:intron | 35.0% | |
| GATACAAAGGGACAATTTCA+GGG | + | chr5.4:49716121-49716140 | MS.gene066330:intron | 35.0% | |
| GATACTAGTGCACAATTTCA+TGG | - | chr5.4:49715983-49716002 | None:intergenic | 35.0% | |
| GATCATTGCCAATGTTATTG+TGG | - | chr5.4:49717606-49717625 | None:intergenic | 35.0% | |
| GATTGGAAACAGAGGAATAA+TGG | - | chr5.4:49716555-49716574 | None:intergenic | 35.0% | |
| GCAAGTACAAGGAAAAGAAT+TGG | + | chr5.4:49715824-49715843 | MS.gene066330:CDS | 35.0% | |
| GGAAAAGGGAAAAATCATGA+AGG | + | chr5.4:49715723-49715742 | MS.gene066330:CDS | 35.0% | |
| GGGTCATTATAGAATTGTCA+GGG | + | chr5.4:49715065-49715084 | MS.gene066330:intron | 35.0% | |
| GTCTTTGATTATGTTGGGAA+GGG | + | chr5.4:49715150-49715169 | MS.gene066330:intron | 35.0% | |
| TATAAGCAGTCCATGGAATT+AGG | + | chr5.4:49717050-49717069 | MS.gene066330:intron | 35.0% | |
| TCACCATGTAGGTTAAAAGT+CGG | + | chr5.4:49715467-49715486 | MS.gene066330:intron | 35.0% | |
| TCCTTGTACTTGCACAAAAT+TGG | - | chr5.4:49715817-49715836 | None:intergenic | 35.0% | |
| TCTTTGATTATGTTGGGAAG+GGG | + | chr5.4:49715151-49715170 | MS.gene066330:intron | 35.0% | |
| TGATACAAAGGGACAATTTC+AGG | + | chr5.4:49716120-49716139 | MS.gene066330:intron | 35.0% | |
| TGGGTCATTATAGAATTGTC+AGG | + | chr5.4:49715064-49715083 | MS.gene066330:intron | 35.0% | |
| TGTCTTTGATTATGTTGGGA+AGG | + | chr5.4:49715149-49715168 | MS.gene066330:intron | 35.0% | |
| TGTTTGCATATGCGAAAATC+AGG | + | chr5.4:49718043-49718062 | MS.gene066330:intron | 35.0% | |
| TTACTGCTGTACAATTTACC+TGG | + | chr5.4:49715426-49715445 | MS.gene066330:intron | 35.0% | |
| TTCTTCTCAACCTAATTCCA+TGG | - | chr5.4:49717063-49717082 | None:intergenic | 35.0% | |
| ! | ATGTTGTTTGTTACAGGCTT+AGG | + | chr5.4:49717296-49717315 | MS.gene066330:intron | 35.0% |
| ! | CACAATTTCATGGACTGAAT+TGG | - | chr5.4:49715973-49715992 | None:intergenic | 35.0% |
| ! | CATATTTTCCATAATCCACG+CGG | + | chr5.4:49717125-49717144 | MS.gene066330:intron | 35.0% |
| ! | CTAGTGCATGTTTGGAATTA+CGG | - | chr5.4:49717956-49717975 | None:intergenic | 35.0% |
| ! | CTGATCGCAAATGAGATTTT+AGG | - | chr5.4:49717702-49717721 | None:intergenic | 35.0% |
| ! | GCAATGCATTTGTTTCGTTT+TGG | + | chr5.4:49715576-49715595 | MS.gene066330:intron | 35.0% |
| ! | GCTTCATCAATTTTCATACG+GGG | - | chr5.4:49714834-49714853 | None:intergenic | 35.0% |
| ! | TAGTGCATGTTTGGAATTAC+GGG | - | chr5.4:49717955-49717974 | None:intergenic | 35.0% |
| ! | TGTTGTTTGTTACAGGCTTA+GGG | + | chr5.4:49717297-49717316 | MS.gene066330:intron | 35.0% |
| ! | TTTTTGTCAGGGACTGAATT+GGG | + | chr5.4:49715045-49715064 | MS.gene066330:intron | 35.0% |
| !! | AATCATGGCGTCATTGATTT+CGG | + | chr5.4:49717874-49717893 | MS.gene066330:intron | 35.0% |
| !! | GGTTTGTTTGCTATTTACGA+TGG | + | chr5.4:49715846-49715865 | MS.gene066330:CDS | 35.0% |
| !!! | CAAGAGCATTTTTAAGTACC+TGG | - | chr5.4:49716528-49716547 | None:intergenic | 35.0% |
| !!! | TTTTTTGTCAGCGACTGAAT+TGG | - | chr5.4:49714761-49714780 | None:intergenic | 35.0% |
| !!! | TTTTTTGTCAGGGACTGAAT+TGG | + | chr5.4:49715044-49715063 | MS.gene066330:intron | 35.0% |
| ACAACTAAAGCTCGTAGTTC+TGG | - | chr5.4:49717213-49717232 | None:intergenic | 40.0% | |
| AGAATTGTCAGGGACTGAAT+TGG | + | chr5.4:49715075-49715094 | MS.gene066330:intron | 40.0% | |
| AGCATATCTGAACACAGATC+AGG | + | chr5.4:49716290-49716309 | MS.gene066330:CDS | 40.0% | |
| ATGGATTCACCCTAGTGAAA+GGG | + | chr5.4:49715757-49715776 | MS.gene066330:CDS | 40.0% | |
| CATCAGTACTATGTACATCG+GGG | - | chr5.4:49717726-49717745 | None:intergenic | 40.0% | |
| CCAGTTGTCCATTTACTCTA+GGG | - | chr5.4:49717651-49717670 | None:intergenic | 40.0% | |
| CTTGTGTTGTGGTTAGGTTT+AGG | + | chr5.4:49718177-49718196 | MS.gene066330:CDS | 40.0% | |
| GAATCTGAAAGCAGACAGAT+TGG | - | chr5.4:49716572-49716591 | None:intergenic | 40.0% | |
| GAATTGTCAGGGACTGAATT+GGG | + | chr5.4:49715076-49715095 | MS.gene066330:intron | 40.0% | |
| GGACAGTGAGAAAATTGTGA+GGG | - | chr5.4:49714740-49714759 | None:intergenic | 40.0% | |
| GGCATCATTGAGAATAAAGG+TGG | + | chr5.4:49716486-49716505 | MS.gene066330:CDS | 40.0% | |
| GGGAGTTTGACAAAATCACA+AGG | - | chr5.4:49717934-49717953 | None:intergenic | 40.0% | |
| TAGATTAGTGACGAGTTCGA+TGG | + | chr5.4:49717851-49717870 | MS.gene066330:intron | 40.0% | |
| TATGGATTCACCCTAGTGAA+AGG | + | chr5.4:49715756-49715775 | MS.gene066330:CDS | 40.0% | |
| TGCTTCAGCTGTTAATTGCT+TGG | - | chr5.4:49718129-49718148 | None:intergenic | 40.0% | |
| TGGACAGTGAGAAAATTGTG+AGG | - | chr5.4:49714741-49714760 | None:intergenic | 40.0% | |
| ! | AGTCGGCTGTACAAAGTTTT+AGG | + | chr5.4:49715484-49715503 | MS.gene066330:intron | 40.0% |
| ! | AGTGCATGTTTGGAATTACG+GGG | - | chr5.4:49717954-49717973 | None:intergenic | 40.0% |
| ! | CGAGGCATCATTGAGAATAA+AGG | + | chr5.4:49716483-49716502 | MS.gene066330:CDS | 40.0% |
| ! | CGCGTGGATTATGGAAAATA+TGG | - | chr5.4:49717127-49717146 | None:intergenic | 40.0% |
| ! | CTGAAGATATGTAGAAGTGC+TGG | + | chr5.4:49716858-49716877 | MS.gene066330:intron | 40.0% |
| ! | GCCAATTTTGTGCAAGTACA+AGG | + | chr5.4:49715813-49715832 | MS.gene066330:CDS | 40.0% |
| ! | TCAGGTAATGGCAAATCAAG+AGG | + | chr5.4:49718061-49718080 | MS.gene066330:intron | 40.0% |
| ! | TCGCATTTTCGATAAAGCGT+AGG | - | chr5.4:49716013-49716032 | None:intergenic | 40.0% |
| !! | ATGTAGAAGTGCTGGAAAAG+AGG | + | chr5.4:49716866-49716885 | MS.gene066330:intron | 40.0% |
| !! | TTCTTGCAAGTGATGGACTT+TGG | + | chr5.4:49717770-49717789 | MS.gene066330:CDS | 40.0% |
| !!! | CTTTTGAGATAGATGCAGCA+GGG | - | chr5.4:49716272-49716291 | None:intergenic | 40.0% |
| AATCAGTTTGGTCCCTCTGT+TGG | - | chr5.4:49716044-49716063 | None:intergenic | 45.0% | |
| AGCAGACAGATTGGAAACAG+AGG | - | chr5.4:49716563-49716582 | None:intergenic | 45.0% | |
| ATAATCCACGCGGTATTTGG+CGG | + | chr5.4:49717135-49717154 | MS.gene066330:intron | 45.0% | |
| ATGATGCCTCGTTCTGTGTT+AGG | - | chr5.4:49716474-49716493 | None:intergenic | 45.0% | |
| ATTATGTTGGGAAGGGGACT+TGG | + | chr5.4:49715157-49715176 | MS.gene066330:intron | 45.0% | |
| CCCTAGAGTAAATGGACAAC+TGG | + | chr5.4:49717648-49717667 | MS.gene066330:CDS | 45.0% | |
| CGAGCGGTTCTTTCAAGAAA+AGG | + | chr5.4:49716417-49716436 | MS.gene066330:CDS | 45.0% | |
| CTATTTACGATGGCCACTTG+GGG | + | chr5.4:49715856-49715875 | MS.gene066330:CDS | 45.0% | |
| CTTGCACAAAATTGGCAACG+TGG | - | chr5.4:49715809-49715828 | None:intergenic | 45.0% | |
| GCCAGTTGTCCATTTACTCT+AGG | - | chr5.4:49717652-49717671 | None:intergenic | 45.0% | |
| GCTATTTACGATGGCCACTT+GGG | + | chr5.4:49715855-49715874 | MS.gene066330:CDS | 45.0% | |
| GTAATCCTCCATCGGATGAT+TGG | - | chr5.4:49715787-49715806 | None:intergenic | 45.0% | |
| TAATGTCGGAGATTCACGAG+CGG | + | chr5.4:49716401-49716420 | MS.gene066330:CDS | 45.0% | |
| TATTTACGATGGCCACTTGG+GGG | + | chr5.4:49715857-49715876 | MS.gene066330:CDS | 45.0% | |
| TCCATAATCCACGCGGTATT+TGG | + | chr5.4:49717132-49717151 | MS.gene066330:intron | 45.0% | |
| TGACGAGTTCGATGGAATCA+TGG | + | chr5.4:49717859-49717878 | MS.gene066330:intron | 45.0% | |
| TTACAGGCTTAGGGTGTAAG+TGG | + | chr5.4:49717306-49717325 | MS.gene066330:intron | 45.0% | |
| ! | AAATACCAAGAGGGCACATC+AGG | - | chr5.4:49715192-49715211 | None:intergenic | 45.0% |
| ! | AATTGCTTGGCTGCTTTCAG+TGG | - | chr5.4:49718116-49718135 | None:intergenic | 45.0% |
| ! | TGCTATTTACGATGGCCACT+TGG | + | chr5.4:49715854-49715873 | MS.gene066330:CDS | 45.0% |
| !! | AATAGTTCTGATTTGGGGCG+TGG | + | chr5.4:49716324-49716343 | MS.gene066330:CDS | 45.0% |
| !! | CAGCCGACTTTTAACCTACA+TGG | - | chr5.4:49715473-49715492 | None:intergenic | 45.0% |
| !! | GGTTTTGTCTCCAACATTCC+AGG | + | chr5.4:49716507-49716526 | MS.gene066330:CDS | 45.0% |
| !! | TATAAGTGTCGGTGTCGTAC+CGG | - | chr5.4:49714883-49714902 | None:intergenic | 45.0% |
| !! | TGCAAGTGATGGACTTTGGA+AGG | + | chr5.4:49717774-49717793 | MS.gene066330:CDS | 45.0% |
| !!! | GCTTTTGAGATAGATGCAGC+AGG | - | chr5.4:49716273-49716292 | None:intergenic | 45.0% |
| AGGCTTAGGGTGTAAGTGGT+AGG | + | chr5.4:49717310-49717329 | MS.gene066330:intron | 50.0% | |
| CATGAGCCTAACACAGAACG+AGG | + | chr5.4:49716465-49716484 | MS.gene066330:CDS | 50.0% | |
| CGCGAACTGCTTTATGGTTG+TGG | + | chr5.4:49717016-49717035 | MS.gene066330:intron | 50.0% | |
| GCAACGTGGTAATCCTCCAT+CGG | - | chr5.4:49715795-49715814 | None:intergenic | 50.0% | |
| GCGAAATAGCCACCAACAGA+GGG | + | chr5.4:49716029-49716048 | MS.gene066330:intron | 50.0% | |
| GGCGATGTCCCTAGAGTAAA+TGG | + | chr5.4:49717640-49717659 | MS.gene066330:intron | 50.0% | |
| GTGCATCGCGAACTGCTTTA+TGG | + | chr5.4:49717010-49717029 | MS.gene066330:intron | 50.0% | |
| TAATCCACGCGGTATTTGGC+GGG | + | chr5.4:49717136-49717155 | MS.gene066330:intron | 50.0% | |
| TGCGAAATAGCCACCAACAG+AGG | + | chr5.4:49716028-49716047 | MS.gene066330:intron | 50.0% | |
| TTCATCCTGATGTGCCCTCT+TGG | + | chr5.4:49715184-49715203 | MS.gene066330:intron | 50.0% | |
| ! | AAGAGGGCACATCAGGATGA+AGG | - | chr5.4:49715185-49715204 | None:intergenic | 50.0% |
| ! | CATCATGCAGCACCGGAAAA+GGG | + | chr5.4:49715709-49715728 | MS.gene066330:CDS | 50.0% |
| ! | GCCAAATACCGCGTGGATTA+TGG | - | chr5.4:49717136-49717155 | None:intergenic | 50.0% |
| ! | TCATCATGCAGCACCGGAAA+AGG | + | chr5.4:49715708-49715727 | MS.gene066330:CDS | 50.0% |
| !! | ATAAGTGTCGGTGTCGTACC+GGG | - | chr5.4:49714882-49714901 | None:intergenic | 50.0% |
| !! | ATTGGCTCGCCCTTTCACTA+GGG | - | chr5.4:49715769-49715788 | None:intergenic | 50.0% |
| AATCCACGCGGTATTTGGCG+GGG | + | chr5.4:49717137-49717156 | MS.gene066330:intron | 55.0% | |
| ACGCGTTCATCATGCAGCAC+CGG | + | chr5.4:49715702-49715721 | MS.gene066330:CDS | 55.0% | |
| CAGTTTGGTCCCTCTGTTGG+TGG | - | chr5.4:49716041-49716060 | None:intergenic | 55.0% | |
| CTGGCTGTTGCTCGTGCATT+TGG | + | chr5.4:49717667-49717686 | MS.gene066330:CDS | 55.0% | |
| GTTAGTGTCCGTGTCGTGTC+CGG | + | chr5.4:49714951-49714970 | MS.gene066330:intron | 55.0% | |
| ! | AAGGCACTTGATCCCCCAAG+TGG | - | chr5.4:49715872-49715891 | None:intergenic | 55.0% |
| !! | AGTTCTGATTTGGGGCGTGG+TGG | + | chr5.4:49716327-49716346 | MS.gene066330:CDS | 55.0% |
| !! | GATTGGCTCGCCCTTTCACT+AGG | - | chr5.4:49715770-49715789 | None:intergenic | 55.0% |
| AGGGCGAGCCAATCATCCGA+TGG | + | chr5.4:49715776-49715795 | MS.gene066330:CDS | 60.0% | |
| GCACGGACACTCCTCCGATT+AGG | + | chr5.4:49714852-49714871 | MS.gene066330:intron | 60.0% | |
| GCGAGCCAATCATCCGATGG+AGG | + | chr5.4:49715779-49715798 | MS.gene066330:CDS | 60.0% | |
| TCGTACCGGGCACGCCTAAT+CGG | - | chr5.4:49714869-49714888 | None:intergenic | 60.0% | |
| TGAAGCACGGACACGGACAC+CGG | - | chr5.4:49714973-49714992 | None:intergenic | 60.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr5.4:49714962-49714981 | None:intergenic | 65.0% | |
| CTCCTCCGATTAGGCGTGCC+CGG | + | chr5.4:49714861-49714880 | MS.gene066330:intron | 65.0% | |
| GTTCCCCGCCAAATACCGCG+TGG | - | chr5.4:49717143-49717162 | None:intergenic | 65.0% | |
| TACCGGGCACGCCTAATCGG+AGG | - | chr5.4:49714866-49714885 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 49714428 | 49718202 | 49714428 | ID=MS.gene066330 |
| chr5.4 | mRNA | 49714428 | 49718202 | 49714428 | ID=MS.gene066330.t1;Parent=MS.gene066330 |
| chr5.4 | exon | 49714428 | 49714466 | 49714428 | ID=MS.gene066330.t1.exon1;Parent=MS.gene066330.t1 |
| chr5.4 | CDS | 49714428 | 49714466 | 49714428 | ID=cds.MS.gene066330.t1;Parent=MS.gene066330.t1 |
| chr5.4 | exon | 49715693 | 49715932 | 49715693 | ID=MS.gene066330.t1.exon2;Parent=MS.gene066330.t1 |
| chr5.4 | CDS | 49715693 | 49715932 | 49715693 | ID=cds.MS.gene066330.t1;Parent=MS.gene066330.t1 |
| chr5.4 | exon | 49716252 | 49716528 | 49716252 | ID=MS.gene066330.t1.exon3;Parent=MS.gene066330.t1 |
| chr5.4 | CDS | 49716252 | 49716528 | 49716252 | ID=cds.MS.gene066330.t1;Parent=MS.gene066330.t1 |
| chr5.4 | exon | 49717641 | 49717795 | 49717641 | ID=MS.gene066330.t1.exon4;Parent=MS.gene066330.t1 |
| chr5.4 | CDS | 49717641 | 49717795 | 49717641 | ID=cds.MS.gene066330.t1;Parent=MS.gene066330.t1 |
| chr5.4 | exon | 49718065 | 49718202 | 49718065 | ID=MS.gene066330.t1.exon5;Parent=MS.gene066330.t1 |
| chr5.4 | CDS | 49718065 | 49718202 | 49718065 | ID=cds.MS.gene066330.t1;Parent=MS.gene066330.t1 |
| Gene Sequence |
| Protein sequence |
