AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067288

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067288.t1 MTR_8g027375 97.628 548 13 0 1 548 24 571 0.0 1113
MS.gene067288.t1 MTR_3g462760 47.794 544 265 5 11 548 26 556 0.0 536
MS.gene067288.t1 MTR_5g069680 48.162 544 264 6 11 548 27 558 0.0 533
MS.gene067288.t1 MTR_4g015120 47.523 545 268 6 11 548 24 557 0.0 525
MS.gene067288.t1 MTR_7g062310 44.858 564 286 8 2 548 38 593 3.89e-179 518
MS.gene067288.t1 MTR_5g081810 46.852 540 264 8 17 548 5 529 2.23e-177 511
MS.gene067288.t1 MTR_7g062250 47.027 555 269 10 10 548 33 578 7.06e-177 511
MS.gene067288.t1 MTR_7g058690 46.499 557 272 9 10 548 32 580 5.06e-176 509
MS.gene067288.t1 MTR_7g060460 46.168 561 279 9 5 548 27 581 1.08e-175 508
MS.gene067288.t1 MTR_5g083360 45.688 545 284 4 13 548 26 567 1.52e-175 508
MS.gene067288.t1 MTR_4g064530 47.802 546 261 10 1 532 34 569 1.83e-175 508
MS.gene067288.t1 MTR_5g020620 45.421 546 280 6 9 548 28 561 1.29e-174 505
MS.gene067288.t1 MTR_5g073210 44.526 548 294 6 5 548 19 560 7.68e-174 503
MS.gene067288.t1 MTR_7g458880 44.662 562 285 9 5 548 27 580 4.00e-173 502
MS.gene067288.t1 MTR_5g020600 44.790 547 283 7 9 548 32 566 1.43e-172 500
MS.gene067288.t1 MTR_4g064530 46.768 526 256 10 1 512 34 549 2.40e-160 468
MS.gene067288.t1 MTR_2g008330 42.115 558 306 8 1 548 29 579 5.35e-157 461
MS.gene067288.t1 MTR_7g065970 44.059 547 292 8 13 548 27 570 6.52e-157 460
MS.gene067288.t1 MTR_3g101640 42.832 558 303 9 1 548 20 571 4.35e-153 450
MS.gene067288.t1 MTR_3g101635 44.216 536 283 10 7 533 23 551 1.11e-152 449
MS.gene067288.t1 MTR_4g019225 41.788 548 304 8 13 548 28 572 9.96e-152 447
MS.gene067288.t1 MTR_3g071890 45.291 499 265 5 10 504 32 526 1.92e-148 438
MS.gene067288.t1 MTR_7g065980 41.918 563 302 10 1 548 19 571 1.67e-147 436
MS.gene067288.t1 MTR_8g091390 31.139 562 335 14 11 548 34 567 1.38e-71 239
MS.gene067288.t1 MTR_3g078740 29.663 563 336 18 7 526 22 567 2.72e-63 218
MS.gene067288.t1 MTR_3g078700 30.129 541 315 20 5 526 22 518 7.45e-56 196
MS.gene067288.t1 MTR_3g078730 29.887 532 318 17 11 526 25 517 7.60e-56 197
MS.gene067288.t1 MTR_5g081790 53.061 147 62 1 11 150 24 170 3.89e-51 181
MS.gene067288.t1 MTR_5g081790 37.857 280 150 8 235 506 157 420 1.92e-49 176
MS.gene067288.t1 MTR_3g008580 28.240 517 336 14 7 513 25 516 6.55e-50 181
MS.gene067288.t1 MTR_4g101650 28.407 521 336 14 13 523 29 522 4.65e-49 179
MS.gene067288.t1 MTR_1g090707 27.767 515 325 14 25 529 38 515 1.40e-43 164
MS.gene067288.t1 MTR_4g075690 25.505 545 333 15 11 536 30 520 3.38e-41 156
MS.gene067288.t1 MTR_1g026410 26.177 531 318 14 11 521 29 505 3.30e-40 153
MS.gene067288.t1 MTR_4g049390 25.787 508 336 13 5 508 20 490 1.09e-38 149
MS.gene067288.t1 MTR_3g115050 26.121 513 341 11 11 521 30 506 1.43e-38 149
MS.gene067288.t1 MTR_8g479380 25.458 546 356 14 11 548 29 531 5.96e-38 147
MS.gene067288.t1 MTR_7g051440 27.190 548 318 21 7 523 25 522 9.24e-38 147
MS.gene067288.t1 MTR_4g048350 25.591 508 336 15 5 508 20 489 2.04e-35 140
MS.gene067288.t1 MTR_4g075690 25.523 478 284 14 5 464 24 447 7.96e-35 136
MS.gene067288.t1 MTR_8g073840 38.333 180 72 3 11 189 30 171 2.53e-34 132
MS.gene067288.t1 MTR_8g479390 24.864 551 353 16 11 548 31 533 3.67e-34 136
MS.gene067288.t1 MTR_3g083450 24.182 550 370 14 12 543 27 547 4.29e-34 136
MS.gene067288.t1 MTR_3g083430 24.150 559 359 16 12 543 26 546 7.24e-34 135
MS.gene067288.t1 MTR_4g132320 26.916 509 316 15 11 508 31 494 1.15e-33 135
MS.gene067288.t1 MTR_2g088080 25.349 501 334 10 11 508 30 493 1.20e-33 134
MS.gene067288.t1 MTR_4g083210 25.508 541 355 17 1 532 14 515 1.46e-33 134
MS.gene067288.t1 MTR_5g018270 24.905 526 349 15 11 532 31 514 1.75e-33 134
MS.gene067288.t1 MTR_3g083440 23.818 550 372 14 12 543 26 546 3.58e-33 133
MS.gene067288.t1 MTR_3g083400 23.818 550 372 14 12 543 26 546 3.82e-33 133
MS.gene067288.t1 MTR_3g083390 23.818 550 372 14 12 543 26 546 6.14e-33 132
MS.gene067288.t1 MTR_4g083190 24.190 525 337 16 29 536 45 525 1.67e-31 128
MS.gene067288.t1 MTR_3g083410 23.774 530 357 14 32 543 10 510 2.41e-30 124
MS.gene067288.t1 MTR_7g058670 54.118 85 38 1 68 151 13 97 1.09e-27 107
MS.gene067288.t1 MTR_2g088080 24.775 444 294 10 68 508 6 412 3.67e-24 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067288.t1 AT2G46570 65.146 548 191 0 1 548 22 569 0.0 782
MS.gene067288.t1 AT2G46570 65.904 481 164 0 68 548 4 484 0.0 692
MS.gene067288.t1 AT5G01190 47.826 552 268 5 3 548 21 558 0.0 530
MS.gene067288.t1 AT5G05390 47.407 540 277 4 13 548 29 565 0.0 526
MS.gene067288.t1 AT2G38080 46.606 545 271 8 11 548 27 558 1.06e-178 515
MS.gene067288.t1 AT5G58910 46.266 549 273 6 11 548 30 567 3.82e-177 511
MS.gene067288.t1 AT2G40370 44.563 561 291 6 5 548 23 580 4.79e-177 512
MS.gene067288.t1 AT5G03260 46.520 546 274 6 9 548 24 557 7.61e-177 510
MS.gene067288.t1 AT5G01190 48.000 525 257 4 30 548 30 544 1.25e-176 509
MS.gene067288.t1 AT5G58910 46.448 549 271 7 11 548 30 566 1.49e-176 510
MS.gene067288.t1 AT5G60020 45.098 561 279 11 10 548 24 577 2.14e-171 497
MS.gene067288.t1 AT5G07130 45.027 553 280 9 12 548 25 569 7.87e-170 493
MS.gene067288.t1 AT2G30210 44.059 547 289 7 13 548 30 570 9.90e-170 493
MS.gene067288.t1 AT5G58910 45.896 536 261 7 24 548 6 523 4.45e-169 489
MS.gene067288.t1 AT2G29130 46.333 559 278 11 4 548 23 573 2.47e-168 489
MS.gene067288.t1 AT5G60020 45.372 551 272 11 20 548 2 545 2.78e-168 488
MS.gene067288.t1 AT1G18140 44.483 571 278 12 5 548 23 581 9.82e-167 486
MS.gene067288.t1 AT5G09360 43.462 543 289 8 13 548 38 569 2.00e-153 451
MS.gene067288.t1 AT3G09220 43.178 535 276 9 13 531 28 550 5.55e-153 450
MS.gene067288.t1 AT5G60020 44.701 519 258 11 10 506 24 535 2.96e-151 445
MS.gene067288.t1 AT5G48100 43.609 532 280 9 13 532 24 547 1.30e-149 441
MS.gene067288.t1 AT5G01050 41.758 546 297 7 15 548 32 568 1.17e-148 439
MS.gene067288.t1 AT5G07130 46.107 488 239 9 77 548 5 484 2.73e-147 432
MS.gene067288.t1 AT5G07130 46.107 488 239 9 77 548 5 484 2.73e-147 432
MS.gene067288.t1 AT5G01040 40.625 544 304 7 15 548 32 566 8.85e-144 427
MS.gene067288.t1 AT3G09220 42.765 463 241 9 83 531 1 453 2.09e-125 376
MS.gene067288.t1 AT4G39830 31.729 561 326 17 11 539 36 571 1.16e-71 240
MS.gene067288.t1 AT5G21105 31.900 558 320 19 1 526 29 558 3.45e-68 231
MS.gene067288.t1 AT5G21100 31.373 561 313 19 2 527 19 542 1.47e-67 229
MS.gene067288.t1 AT5G21105 31.054 541 313 19 1 509 29 541 3.20e-58 203
MS.gene067288.t1 AT4G39830 31.111 495 283 16 77 539 6 474 2.18e-54 191
MS.gene067288.t1 AT4G39830 31.111 495 283 16 77 539 8 476 2.44e-54 191
MS.gene067288.t1 AT4G25240 28.440 545 356 13 13 548 31 550 1.82e-50 183
MS.gene067288.t1 AT4G25240 28.440 545 356 13 13 548 31 550 1.82e-50 183
MS.gene067288.t1 AT5G48450 28.467 548 335 18 12 543 30 536 8.68e-50 181
MS.gene067288.t1 AT5G48450 28.650 548 334 19 12 543 30 536 1.52e-49 181
MS.gene067288.t1 AT4G39830 29.960 494 277 15 77 539 8 463 2.03e-49 177
MS.gene067288.t1 AT4G12420 27.473 546 350 17 12 541 26 541 4.48e-49 179
MS.gene067288.t1 AT4G12420 27.473 546 350 17 12 541 26 541 4.48e-49 179
MS.gene067288.t1 AT5G51480 28.080 552 350 16 13 548 30 550 4.54e-49 179
MS.gene067288.t1 AT1G75790 26.412 549 332 19 13 539 29 527 1.62e-43 163
MS.gene067288.t1 AT1G21850 27.853 517 325 16 11 521 29 503 3.50e-42 159
MS.gene067288.t1 AT1G21860 25.536 513 342 9 11 521 29 503 1.43e-41 157
MS.gene067288.t1 AT5G66920 24.908 546 369 12 6 548 31 538 1.84e-41 157
MS.gene067288.t1 AT5G21105 33.235 340 195 12 196 526 51 367 1.97e-40 151
MS.gene067288.t1 AT4G28090 24.497 547 361 17 5 544 22 523 1.17e-37 146
MS.gene067288.t1 AT4G22010 26.173 554 344 18 11 548 26 530 1.31e-36 143
MS.gene067288.t1 AT4G38420 25.097 514 351 13 11 521 30 512 1.24e-35 140
MS.gene067288.t1 AT1G76160 24.125 514 349 12 11 521 28 503 6.99e-35 138
MS.gene067288.t1 AT2G23630 25.556 540 361 14 12 548 31 532 1.27e-33 134
MS.gene067288.t1 AT2G23630 26.015 542 356 15 12 548 36 537 1.30e-33 134
MS.gene067288.t1 AT1G41830 23.689 515 350 13 11 521 29 504 1.73e-33 134
MS.gene067288.t1 AT4G37160 25.461 542 360 16 12 548 32 534 5.33e-33 133
MS.gene067288.t1 AT4G38420 24.742 485 331 13 11 492 30 483 1.31e-31 128
MS.gene067288.t1 AT1G55570 26.139 505 297 16 29 508 47 500 3.18e-31 127
MS.gene067288.t1 AT4G38420 25.109 458 306 13 11 464 30 454 1.62e-30 124
MS.gene067288.t1 AT1G55560 24.138 522 329 16 7 508 22 496 8.73e-30 123
MS.gene067288.t1 AT3G13390 23.904 502 326 14 22 508 39 499 1.96e-29 122
MS.gene067288.t1 AT3G13400 23.077 520 341 16 5 508 21 497 3.35e-28 119
MS.gene067288.t1 AT3G13400 23.077 520 341 16 5 508 21 497 3.35e-28 119
MS.gene067288.t1 AT4G37160 24.726 457 301 14 12 464 32 449 7.18e-22 99.0

Find 147 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGGTACCTTTCCCATTTA+AGG 0.142601 8.2:+70600897 MS.gene067288:CDS
AACTACAACTGCTCAATTAA+TGG 0.196124 8.2:+70601156 MS.gene067288:CDS
TCTTGATAAGGAGCCTTAAA+TGG 0.196962 8.2:-70600910 None:intergenic
AACATTGAAAGGTGTCTTAT+TGG 0.207388 8.2:-70600584 None:intergenic
AAGTTCTACGACTTCGTTAA+TGG 0.217996 8.2:+70602318 MS.gene067288:CDS
TTTGGCATGCTCATGTTTCT+TGG 0.221846 8.2:+70600830 MS.gene067288:CDS
ACTCCAATTGTATTCATATA+TGG 0.236387 8.2:-70602558 None:intergenic
AACTGTCAAGCCATGAATAA+TGG 0.250740 8.2:+70602177 MS.gene067288:CDS
AAGCTTCTAGGATTGGAATA+TGG 0.271760 8.2:-70602242 None:intergenic
GGGAAAGGTACCCTATTCTT+TGG 0.277356 8.2:-70600889 None:intergenic
TTAATTGAGCAGTTGTAGTT+AGG 0.279435 8.2:-70601153 None:intergenic
GCTTATTATAAGAAAATAAA+TGG 0.283522 8.2:+70602261 MS.gene067288:CDS
ACTAACTGCACAATTCAATT+TGG 0.283999 8.2:+70602527 MS.gene067288:CDS
TGAAAACATTCACTTGATAT+AGG 0.309799 8.2:-70602080 None:intergenic
ATCAAAAGGGCACTTTCTTT+TGG 0.315039 8.2:+70600812 MS.gene067288:CDS
TAGCCTACTTCAATTATATA+GGG 0.322498 8.2:+70601968 MS.gene067288:CDS
AGGGCCTGGGTGACTGTTAA+TGG 0.326349 8.2:-70601133 None:intergenic
AATTGGACATTGTGTAATAA+AGG 0.339083 8.2:-70600749 None:intergenic
GAAGAATGGAGAAGGAGATC+TGG 0.340403 8.2:+70602906 MS.gene067288:CDS
GGAATATGGCAGGGGAATAT+TGG 0.340724 8.2:+70601037 MS.gene067288:intron
ACTGTCAAGCCATGAATAAT+GGG 0.347700 8.2:+70602178 MS.gene067288:CDS
AGAACTAAGGTCCTTGAATA+TGG 0.349233 8.2:+70602387 MS.gene067288:CDS
ATAGCCTACTTCAATTATAT+AGG 0.351392 8.2:+70601967 MS.gene067288:CDS
AGACAGTCATGGATGGATTA+AGG 0.352838 8.2:+70602055 MS.gene067288:CDS
AAACTCTGGCCTGCTTGAAT+TGG 0.356290 8.2:-70600766 None:intergenic
TGGCTGAGAGGAACGGTTCA+TGG 0.360623 8.2:+70600850 MS.gene067288:CDS
GTACCAACTTAACGTGATTC+CGG 0.363195 8.2:+70601690 MS.gene067288:CDS
CCTTAACATGATGGCAGATC+TGG 0.365511 8.2:-70602949 None:intergenic
TGTCAGCACCCCATTATTCA+TGG 0.370071 8.2:-70602187 None:intergenic
AAATTGAATTGTGCAGTTAG+TGG 0.377880 8.2:-70602525 None:intergenic
AGCTTCTAGGATTGGAATAT+GGG 0.387058 8.2:-70602241 None:intergenic
CTCCAATTGTATTCATATAT+GGG 0.391433 8.2:-70602557 None:intergenic
GCCAGCTTATCATCAGGTTT+AGG 0.392466 8.2:-70602027 None:intergenic
CTTAACAAGTAGGTCCTTCC+CGG 0.393276 8.2:-70601709 None:intergenic
TGATTGTTTATCCAAAGAAT+AGG 0.395265 8.2:+70600878 MS.gene067288:CDS
TATGAATACAATTGGAGTTC+CGG 0.398110 8.2:+70602563 MS.gene067288:CDS
TTCAATGACTCCGTGTCATA+TGG 0.413446 8.2:-70602357 None:intergenic
GAGCAGTTGTAGTTAGGGCC+TGG 0.413472 8.2:-70601147 None:intergenic
GATTGTTTATCCAAAGAATA+GGG 0.418861 8.2:+70600879 MS.gene067288:CDS
CCAGATCTGCCATCATGTTA+AGG 0.420312 8.2:+70602949 MS.gene067288:CDS
ATAATTAGTTGCTCTTGATA+AGG 0.422361 8.2:-70600922 None:intergenic
TTATAATAAGCTTCTAGGAT+TGG 0.425287 8.2:-70602249 None:intergenic
ACATTGATATACACCAATCA+TGG 0.429587 8.2:+70602860 MS.gene067288:CDS
AACGAAGTCGTAGAACTTAG+AGG 0.434172 8.2:-70602313 None:intergenic
AGCAGTTGTAGTTAGGGCCT+GGG 0.439354 8.2:-70601146 None:intergenic
CTGTAGCCATGGATGTGAAT+TGG 0.439868 8.2:-70602465 None:intergenic
AACTGCACAATTCAATTTGG+TGG 0.440435 8.2:+70602530 MS.gene067288:CDS
CTTTACAGTGGTGAATCAAA+AGG 0.446706 8.2:+70600798 MS.gene067288:CDS
TAATTGAGCAGTTGTAGTTA+GGG 0.447953 8.2:-70601152 None:intergenic
TACCAACTTAACGTGATTCC+GGG 0.449429 8.2:+70601691 MS.gene067288:CDS
TCTTCTTGTGCGTAAACAAC+AGG 0.450321 8.2:-70600538 None:intergenic
ACAATCCTGCCAGACTTGTA+AGG 0.451834 8.2:-70601922 None:intergenic
GTGTCATATGGAATGTTGTT+AGG 0.453148 8.2:-70602345 None:intergenic
ACCACAGACACGGTGATGCT+TGG 0.456206 8.2:+70601829 MS.gene067288:CDS
AAAGACATTGTCACAGTCAA+TGG 0.458479 8.2:+70600502 MS.gene067288:CDS
TTGGAGTTCCGGTCGGTGGA+TGG 0.462730 8.2:+70602574 MS.gene067288:CDS
TTAACAGCCAGCTTATCATC+AGG 0.463496 8.2:-70602033 None:intergenic
CAAGAGCAACTAATTATACT+AGG 0.466170 8.2:+70600928 MS.gene067288:CDS
ATTGAATGGAACTAGAACTA+AGG 0.468333 8.2:+70602374 MS.gene067288:CDS
CTGGTTGATCAGCTGAAACT+AGG 0.471483 8.2:-70601873 None:intergenic
ACCTAAACCTGATGATAAGC+TGG 0.474955 8.2:+70602026 MS.gene067288:CDS
CTTTCAATGTTACAATTCAC+TGG 0.476945 8.2:+70600596 MS.gene067288:CDS
GCTGTTGCACCTTACAAGTC+TGG 0.478773 8.2:+70601913 MS.gene067288:CDS
CTTGATAAGGAGCCTTAAAT+GGG 0.480376 8.2:-70600909 None:intergenic
TGTAGCCATGGATGTGAATT+GGG 0.485014 8.2:-70602464 None:intergenic
ATTAATTAGTCTTAACAAGT+AGG 0.486221 8.2:-70601719 None:intergenic
TAGAACTTAGAGGGTGCGTC+AGG 0.489021 8.2:-70602303 None:intergenic
CCATTCCTAGTCCCCATGAT+TGG 0.490748 8.2:-70602873 None:intergenic
TATGACACGGAGTCATTGAA+TGG 0.494839 8.2:+70602360 MS.gene067288:CDS
TGTGCGTAAACAACAGGTCC+TGG 0.500000 8.2:-70600532 None:intergenic
ATGGTATTTATAGTGAAGAA+TGG 0.501936 8.2:+70602892 MS.gene067288:CDS
TCAGGTTTAGGTAATTTAGC+TGG 0.504745 8.2:-70602015 None:intergenic
CAGTGAATTGTAACATTGAA+AGG 0.505375 8.2:-70600595 None:intergenic
TGGAGTTCCGGTCGGTGGAT+GGG 0.506523 8.2:+70602575 MS.gene067288:CDS
TTGTTAAGACTAATTAATGC+AGG 0.514126 8.2:+70601724 MS.gene067288:CDS
TTTACAGTGGTGAATCAAAA+GGG 0.516141 8.2:+70600799 MS.gene067288:CDS
GCACCTTGGTACCATATTCA+AGG 0.520129 8.2:-70602398 None:intergenic
TATATAATTGAAGTAGGCTA+TGG 0.522248 8.2:-70601965 None:intergenic
AACTTATGGCACATGGTGCA+AGG 0.522324 8.2:+70600291 None:intergenic
TGTTTCTTGGCTGAGAGGAA+CGG 0.529635 8.2:+70600843 MS.gene067288:CDS
GGCAGGGGAATATTGGCTGC+AGG 0.531339 8.2:+70601044 MS.gene067288:intron
TTAATGGTATATGCATCTGC+TGG 0.533299 8.2:-70601117 None:intergenic
TAAAGTTATAAGTGAAACTC+TGG 0.533846 8.2:-70600780 None:intergenic
TCCAATTGTATTCATATATG+GGG 0.536273 8.2:-70602556 None:intergenic
TTGCACCTTACAAGTCTGGC+AGG 0.539924 8.2:+70601917 MS.gene067288:CDS
TTCCCGGAATCACGTTAAGT+TGG 0.539938 8.2:-70601693 None:intergenic
CCAATCATGGGGACTAGGAA+TGG 0.541532 8.2:+70602873 MS.gene067288:CDS
ACAGTCAATGGTATGTATCC+AGG 0.543289 8.2:+70600514 MS.gene067288:CDS
GAGCATGCCACTCTAGTCAA+TGG 0.543397 8.2:+70601081 MS.gene067288:CDS
TTTATAGTGAAGAATGGAGA+AGG 0.543881 8.2:+70602898 MS.gene067288:CDS
CATTGATATACACCAATCAT+GGG 0.545051 8.2:+70602861 MS.gene067288:CDS
CTGGATTATCAGCCACAAAA+CGG 0.552403 8.2:-70602605 None:intergenic
ACTTATGGCACATGGTGCAA+GGG 0.559084 8.2:+70600292 None:intergenic
ACAGCTGCCCATCCACCGAC+CGG 0.565254 8.2:-70602582 None:intergenic
GTATATGCATCTGCTGGAGG+TGG 0.568362 8.2:-70601111 None:intergenic
TACGTTGTAGGATATGGCAC+AGG 0.570942 8.2:+70602492 MS.gene067288:CDS
CAACGTAAAAGCTGTAGCCA+TGG 0.572797 8.2:-70602476 None:intergenic
CTTGTAAGGTGCAACAGCCA+TGG 0.573214 8.2:-70601908 None:intergenic
TTTGTTTGGGTGTCTTTGAG+TGG 0.573318 8.2:-70602155 None:intergenic
TGTTAAGTTGTGATTTGCAA+TGG 0.574912 8.2:-70601770 None:intergenic
ACATGATGGCAGATCTGGAG+GGG 0.576890 8.2:-70602944 None:intergenic
GCTCATGTTTCTTGGCTGAG+AGG 0.578994 8.2:+70600838 MS.gene067288:CDS
ATACACCAATCATGGGGACT+AGG 0.580579 8.2:+70602868 MS.gene067288:CDS
TAACATGATGGCAGATCTGG+AGG 0.582078 8.2:-70602946 None:intergenic
GACACGGTGATGCTTGGACC+AGG 0.583332 8.2:+70601835 MS.gene067288:CDS
GCTGTTAAGACAGTCATGGA+TGG 0.584431 8.2:+70602048 MS.gene067288:CDS
CAGCTATCATGCTGGTACGA+CGG 0.584709 8.2:+70600721 MS.gene067288:CDS
AATCACCCAATTCACATCCA+TGG 0.590062 8.2:+70602459 MS.gene067288:CDS
ATCACCGTGTCTGTGGTGAA+TGG 0.592745 8.2:-70601823 None:intergenic
ACAATTGGAGTTCCGGTCGG+TGG 0.593840 8.2:+70602570 MS.gene067288:CDS
ACCAGTAGGAAAATATTCCA+TGG 0.595442 8.2:+70601891 MS.gene067288:CDS
TAAGGAGCCTTAAATGGGAA+AGG 0.596691 8.2:-70600904 None:intergenic
CTTATGGCACATGGTGCAAG+GGG 0.596985 8.2:+70600293 None:intergenic
ACACAATGTCCAATTCAAGC+AGG 0.599564 8.2:+70600757 MS.gene067288:CDS
AACATGATGGCAGATCTGGA+GGG 0.600329 8.2:-70602945 None:intergenic
ACCAGCATGATAGCTGCTGC+CGG 0.600993 8.2:-70600714 None:intergenic
TTAACAATCGTGGAAGCTGA+TGG 0.601200 8.2:+70601787 MS.gene067288:CDS
GTAGGTAGTCCTTAACATGA+TGG 0.605546 8.2:-70602958 None:intergenic
GTTTCAGCTGATCAACCAGT+AGG 0.611282 8.2:+70601877 MS.gene067288:CDS
TGCCCCTATATAATTGAAGT+AGG 0.615587 8.2:-70601971 None:intergenic
GCTTCTAGGATTGGAATATG+GGG 0.618602 8.2:-70602240 None:intergenic
TCCGGCAGCAGCTATCATGC+TGG 0.619502 8.2:+70600713 MS.gene067288:CDS
AGCCTACTTCAATTATATAG+GGG 0.623554 8.2:+70601969 MS.gene067288:CDS
ACGAAGTCGTAGAACTTAGA+GGG 0.623619 8.2:-70602312 None:intergenic
TCCAAGCATCACCGTGTCTG+TGG 0.628969 8.2:-70601830 None:intergenic
AGATGACAGAATCATAGTCA+AGG 0.630065 8.2:+70600558 MS.gene067288:CDS
AGCTCCTCCATTGACTAGAG+TGG 0.630206 8.2:-70601088 None:intergenic
CTGCAAAATGAGTTGCACCT+TGG 0.632460 8.2:-70602412 None:intergenic
GCTGGCTGTTAAGACAGTCA+TGG 0.632833 8.2:+70602044 MS.gene067288:CDS
CATGATGGCAGATCTGGAGG+GGG 0.636154 8.2:-70602943 None:intergenic
AGGACATTCAGTGTTTGACC+TGG 0.640728 8.2:-70601853 None:intergenic
AACTTAACGTGATTCCGGGA+AGG 0.644475 8.2:+70601695 MS.gene067288:CDS
GGACATTGTGTAATAAAGGA+CGG 0.648269 8.2:-70600745 None:intergenic
AAATCACAACTTAACAATCG+TGG 0.654458 8.2:+70601777 MS.gene067288:CDS
TATGTCAAACTTATGGCACA+TGG 0.655710 8.2:+70600284 None:intergenic
CCAATTGTATTCATATATGG+GGG 0.658094 8.2:-70602555 None:intergenic
ATGGTATATGCATCTGCTGG+AGG 0.664774 8.2:-70601114 None:intergenic
GGTCCTTGAATATGGTACCA+AGG 0.666302 8.2:+70602395 MS.gene067288:CDS
TTTCACTTATAACTTTACAG+TGG 0.669501 8.2:+70600786 MS.gene067288:CDS
AATACAATTGGAGTTCCGGT+CGG 0.670994 8.2:+70602567 MS.gene067288:CDS
GAAGCCATTCACCACAGACA+CGG 0.671173 8.2:+70601819 MS.gene067288:CDS
CATGCCACTCTAGTCAATGG+AGG 0.673164 8.2:+70601084 MS.gene067288:CDS
CTGTCAAGCCATGAATAATG+GGG 0.678450 8.2:+70602179 MS.gene067288:CDS
TAACAACATTCCATATGACA+CGG 0.689215 8.2:+70602347 MS.gene067288:CDS
TATACCATTAACAGTCACCC+AGG 0.695513 8.2:+70601129 MS.gene067288:CDS
GTGCAAGGGGAGAATCAACA+AGG 0.699031 8.2:+70600306 MS.gene067288:CDS
ATTGATATACACCAATCATG+GGG 0.716904 8.2:+70602862 MS.gene067288:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTGATTTCATTTAA+TGG + chr8.2:70601219-70601238 MS.gene067288:intron 10.0%
!!! AAAATATTTCTATTTATTTG+TGG + chr8.2:70600384-70600403 MS.gene067288:intron 10.0%
!!! AAACTTTATTTTCAAATTTT+AGG + chr8.2:70600683-70600702 MS.gene067288:intron 10.0%
!!! AAATATTGATTTCATTTAAT+GGG + chr8.2:70601220-70601239 MS.gene067288:intron 10.0%
!! GCTTATTATAAGAAAATAAA+TGG + chr8.2:70602261-70602280 MS.gene067288:CDS 15.0%
!! TTAAGTTACGTAAAATAATT+TGG + chr8.2:70601476-70601495 MS.gene067288:intron 15.0%
!!! AATATTGATTTCATTTAATG+GGG + chr8.2:70601221-70601240 MS.gene067288:intron 15.0%
!!! CTATTTTCTTAAATTATTAC+TGG + chr8.2:70601341-70601360 MS.gene067288:intron 15.0%
!!! TTGATTTCTTTTTTTCTTTT+TGG + chr8.2:70602768-70602787 MS.gene067288:intron 15.0%
!! AAAAATATATTCATCACCAT+TGG + chr8.2:70602114-70602133 MS.gene067288:CDS 20.0%
!! AAATGAAATATACATTGATG+AGG - chr8.2:70602638-70602657 None:intergenic 20.0%
!! ATAGGTTGTATACAATATTA+AGG - chr8.2:70601250-70601269 None:intergenic 20.0%
!! TATTCATTTCTTATAGTCAA+TGG + chr8.2:70602801-70602820 MS.gene067288:intron 20.0%
!!! ATATTGATTTCATTTAATGG+GGG + chr8.2:70601222-70601241 MS.gene067288:intron 20.0%
!!! ATTAATTAGTCTTAACAAGT+AGG - chr8.2:70601722-70601741 None:intergenic 20.0%
!!! GTCAGTGATTATTTTATAAA+GGG + chr8.2:70601439-70601458 MS.gene067288:intron 20.0%
!!! TATTTTTTCTACAAATGTGA+AGG - chr8.2:70600370-70600389 None:intergenic 20.0%
!!! TGTCAGTGATTATTTTATAA+AGG + chr8.2:70601438-70601457 MS.gene067288:intron 20.0%
!!! TTATTTTCAAATTTTAGGCA+TGG + chr8.2:70600688-70600707 MS.gene067288:intron 20.0%
!!! TTTTCTTATAATAAGCTTCT+AGG - chr8.2:70602257-70602276 None:intergenic 20.0%
!!! TTTTTTAACATTCAATCCAA+TGG - chr8.2:70602133-70602152 None:intergenic 20.0%
! AAACATTGAATTCAAACCAA+AGG - chr8.2:70600970-70600989 None:intergenic 25.0%
! AATTGGACATTGTGTAATAA+AGG - chr8.2:70600752-70600771 None:intergenic 25.0%
! ACTCCAATTGTATTCATATA+TGG - chr8.2:70602561-70602580 None:intergenic 25.0%
! ATAATTAGTTGCTCTTGATA+AGG - chr8.2:70600925-70600944 None:intergenic 25.0%
! ATAGCCTACTTCAATTATAT+AGG + chr8.2:70601967-70601986 MS.gene067288:CDS 25.0%
! ATGGTATTTATAGTGAAGAA+TGG + chr8.2:70602892-70602911 MS.gene067288:CDS 25.0%
! CTCCAATTGTATTCATATAT+GGG - chr8.2:70602560-70602579 None:intergenic 25.0%
! GATTGTTTATCCAAAGAATA+GGG + chr8.2:70600879-70600898 MS.gene067288:CDS 25.0%
! GTAAAATAATTTGGCTAACA+TGG + chr8.2:70601485-70601504 MS.gene067288:intron 25.0%
! TAAAGTTATAAGTGAAACTC+TGG - chr8.2:70600783-70600802 None:intergenic 25.0%
! TAGCCTACTTCAATTATATA+GGG + chr8.2:70601968-70601987 MS.gene067288:CDS 25.0%
! TATACTAGGTAACTTAAATG+TGG + chr8.2:70600942-70600961 MS.gene067288:intron 25.0%
! TATATAATTGAAGTAGGCTA+TGG - chr8.2:70601968-70601987 None:intergenic 25.0%
! TCCAATTGTATTCATATATG+GGG - chr8.2:70602559-70602578 None:intergenic 25.0%
! TGAAAACATTCACTTGATAT+AGG - chr8.2:70602083-70602102 None:intergenic 25.0%
! TGATTGTTTATCCAAAGAAT+AGG + chr8.2:70600878-70600897 MS.gene067288:CDS 25.0%
! TTGTTAAGACTAATTAATGC+AGG + chr8.2:70601724-70601743 MS.gene067288:CDS 25.0%
! TTTCACTTATAACTTTACAG+TGG + chr8.2:70600786-70600805 MS.gene067288:CDS 25.0%
!! AACAAGGTTCTATGATTTTA+AGG + chr8.2:70600322-70600341 MS.gene067288:CDS 25.0%
!! TCAATATTTTCACTATCACT+TGG - chr8.2:70601209-70601228 None:intergenic 25.0%
!! TTTCCATTTTACTAAACATC+CGG + chr8.2:70602657-70602676 MS.gene067288:intron 25.0%
!!! GTGATTATTTTATAAAGGGA+TGG + chr8.2:70601443-70601462 MS.gene067288:intron 25.0%
!!! TTATAATAAGCTTCTAGGAT+TGG - chr8.2:70602252-70602271 None:intergenic 25.0%
AAATCACAACTTAACAATCG+TGG + chr8.2:70601777-70601796 MS.gene067288:CDS 30.0%
AAATTGAATTGTGCAGTTAG+TGG - chr8.2:70602528-70602547 None:intergenic 30.0%
AACTACAACTGCTCAATTAA+TGG + chr8.2:70601156-70601175 MS.gene067288:CDS 30.0%
AATGAACTGCATTATGTATG+AGG - chr8.2:70600637-70600656 None:intergenic 30.0%
ACATTGATATACACCAATCA+TGG + chr8.2:70602860-70602879 MS.gene067288:CDS 30.0%
ACTAACTGCACAATTCAATT+TGG + chr8.2:70602527-70602546 MS.gene067288:CDS 30.0%
ACTAATGTTGTGAGCTAATT+CGG + chr8.2:70601016-70601035 MS.gene067288:intron 30.0%
ACTATTGTTGATGTGCTTAA+TGG + chr8.2:70600432-70600451 MS.gene067288:intron 30.0%
AGCCTACTTCAATTATATAG+GGG + chr8.2:70601969-70601988 MS.gene067288:CDS 30.0%
ATTGAATGGAACTAGAACTA+AGG + chr8.2:70602374-70602393 MS.gene067288:CDS 30.0%
ATTGATATACACCAATCATG+GGG + chr8.2:70602862-70602881 MS.gene067288:CDS 30.0%
CAAGAGCAACTAATTATACT+AGG + chr8.2:70600928-70600947 MS.gene067288:CDS 30.0%
CAGTGAATTGTAACATTGAA+AGG - chr8.2:70600598-70600617 None:intergenic 30.0%
CATTGATATACACCAATCAT+GGG + chr8.2:70602861-70602880 MS.gene067288:CDS 30.0%
CCAATTGTATTCATATATGG+GGG - chr8.2:70602558-70602577 None:intergenic 30.0%
CTTTCAATGTTACAATTCAC+TGG + chr8.2:70600596-70600615 MS.gene067288:CDS 30.0%
TAACAACATTCCATATGACA+CGG + chr8.2:70602347-70602366 MS.gene067288:CDS 30.0%
TAACTTAAATGTGGTTCCTT+TGG + chr8.2:70600951-70600970 MS.gene067288:intron 30.0%
TAATTGAGCAGTTGTAGTTA+GGG - chr8.2:70601155-70601174 None:intergenic 30.0%
TACAAATGTGAAGGTCAAAA+TGG - chr8.2:70600361-70600380 None:intergenic 30.0%
TATGAATACAATTGGAGTTC+CGG + chr8.2:70602563-70602582 MS.gene067288:CDS 30.0%
TTAATTGAGCAGTTGTAGTT+AGG - chr8.2:70601156-70601175 None:intergenic 30.0%
TTTACAGTGGTGAATCAAAA+GGG + chr8.2:70600799-70600818 MS.gene067288:CDS 30.0%
TTTATAGTGAAGAATGGAGA+AGG + chr8.2:70602898-70602917 MS.gene067288:CDS 30.0%
! ATGTTAGTGCTCAATTTGTT+AGG - chr8.2:70602718-70602737 None:intergenic 30.0%
! TCAATGGTATAACTTTTTGC+AGG + chr8.2:70602817-70602836 MS.gene067288:intron 30.0%
! TGTTAAGTTGTGATTTGCAA+TGG - chr8.2:70601773-70601792 None:intergenic 30.0%
! TTCCATTTTACTAAACATCC+GGG + chr8.2:70602658-70602677 MS.gene067288:intron 30.0%
!! AACATTGAAAGGTGTCTTAT+TGG - chr8.2:70600587-70600606 None:intergenic 30.0%
!! TGTTAGTGCTCAATTTGTTA+GGG - chr8.2:70602717-70602736 None:intergenic 30.0%
!!! CTTTTTTTCTTTTTGGCTGA+AGG + chr8.2:70602775-70602794 MS.gene067288:intron 30.0%
AAAGACATTGTCACAGTCAA+TGG + chr8.2:70600502-70600521 MS.gene067288:CDS 35.0%
AACTGCACAATTCAATTTGG+TGG + chr8.2:70602530-70602549 MS.gene067288:CDS 35.0%
AACTGTCAAGCCATGAATAA+TGG + chr8.2:70602177-70602196 MS.gene067288:CDS 35.0%
AAGTTCTACGACTTCGTTAA+TGG + chr8.2:70602318-70602337 MS.gene067288:CDS 35.0%
ACCAGTAGGAAAATATTCCA+TGG + chr8.2:70601891-70601910 MS.gene067288:CDS 35.0%
ACTGTCAAGCCATGAATAAT+GGG + chr8.2:70602178-70602197 MS.gene067288:CDS 35.0%
AGAACTAAGGTCCTTGAATA+TGG + chr8.2:70602387-70602406 MS.gene067288:CDS 35.0%
AGATGACAGAATCATAGTCA+AGG + chr8.2:70600558-70600577 MS.gene067288:CDS 35.0%
CAGTCTCATGGATATTGTTA+TGG - chr8.2:70601551-70601570 None:intergenic 35.0%
CCCCCATATATGAATACAAT+TGG + chr8.2:70602555-70602574 MS.gene067288:CDS 35.0%
CTTCATACTGAAAACATGTC+TGG + chr8.2:70601282-70601301 MS.gene067288:intron 35.0%
CTTGATAAGGAGCCTTAAAT+GGG - chr8.2:70600912-70600931 None:intergenic 35.0%
CTTTACAGTGGTGAATCAAA+AGG + chr8.2:70600798-70600817 MS.gene067288:CDS 35.0%
GGACATTGTGTAATAAAGGA+CGG - chr8.2:70600748-70600767 None:intergenic 35.0%
GTGTCATATGGAATGTTGTT+AGG - chr8.2:70602348-70602367 None:intergenic 35.0%
TCAGGTTTAGGTAATTTAGC+TGG - chr8.2:70602018-70602037 None:intergenic 35.0%
TCTTGATAAGGAGCCTTAAA+TGG - chr8.2:70600913-70600932 None:intergenic 35.0%
TGCCCCTATATAATTGAAGT+AGG - chr8.2:70601974-70601993 None:intergenic 35.0%
TTAATGGTATATGCATCTGC+TGG - chr8.2:70601120-70601139 None:intergenic 35.0%
TTGTGAGCTAATTCGGAATA+TGG + chr8.2:70601023-70601042 MS.gene067288:intron 35.0%
! AGCTTTTACGTTGTAGGATA+TGG + chr8.2:70602486-70602505 MS.gene067288:CDS 35.0%
! ATGAAGCACTAACACATACA+CGG - chr8.2:70601402-70601421 None:intergenic 35.0%
! CAAATTTTAGGCATGGTATC+CGG + chr8.2:70600695-70600714 MS.gene067288:intron 35.0%
! CTAAACCAGTCTAAGACAAT+TGG + chr8.2:70601587-70601606 MS.gene067288:intron 35.0%
! TATAACTTTTTGCAGGTGTG+TGG + chr8.2:70602824-70602843 MS.gene067288:intron 35.0%
! TCCATTTTACTAAACATCCG+GGG + chr8.2:70602659-70602678 MS.gene067288:intron 35.0%
! TTCAGTATGAAGTGTCAATG+TGG - chr8.2:70601274-70601293 None:intergenic 35.0%
!! AAGCTTCTAGGATTGGAATA+TGG - chr8.2:70602245-70602264 None:intergenic 35.0%
!! AGCTTCTAGGATTGGAATAT+GGG - chr8.2:70602244-70602263 None:intergenic 35.0%
!! GTTAGTGCTCAATTTGTTAG+GGG - chr8.2:70602716-70602735 None:intergenic 35.0%
!! TTAGTGCTCAATTTGTTAGG+GGG - chr8.2:70602715-70602734 None:intergenic 35.0%
!!! ATCAAAAGGGCACTTTCTTT+TGG + chr8.2:70600812-70600831 MS.gene067288:CDS 35.0%
!!! ATGGCTTGACAGTTTTGTTT+GGG - chr8.2:70602171-70602190 None:intergenic 35.0%
AACGAAGTCGTAGAACTTAG+AGG - chr8.2:70602316-70602335 None:intergenic 40.0%
AATACAATTGGAGTTCCGGT+CGG + chr8.2:70602567-70602586 MS.gene067288:CDS 40.0%
AATCACCCAATTCACATCCA+TGG + chr8.2:70602459-70602478 MS.gene067288:CDS 40.0%
AATTTGGCTAACATGGTGCA+TGG + chr8.2:70601492-70601511 MS.gene067288:intron 40.0%
ACACAATGTCCAATTCAAGC+AGG + chr8.2:70600757-70600776 MS.gene067288:CDS 40.0%
ACAGTCAATGGTATGTATCC+AGG + chr8.2:70600514-70600533 MS.gene067288:CDS 40.0%
ACATTGATGAGGTGTATACC+TGG - chr8.2:70602627-70602646 None:intergenic 40.0%
ACCCCGGATGTTTAGTAAAA+TGG - chr8.2:70602663-70602682 None:intergenic 40.0%
ACCTAAACCTGATGATAAGC+TGG + chr8.2:70602026-70602045 MS.gene067288:CDS 40.0%
ACGAAGTCGTAGAACTTAGA+GGG - chr8.2:70602315-70602334 None:intergenic 40.0%
AGCTAATTCGGAATATGGCA+GGG + chr8.2:70601028-70601047 MS.gene067288:intron 40.0%
AGTTGCCAATTGTCTTAGAC+TGG - chr8.2:70601595-70601614 None:intergenic 40.0%
CAATATCCATGAGACTGCAT+AGG + chr8.2:70601554-70601573 MS.gene067288:intron 40.0%
CTGGATTATCAGCCACAAAA+CGG - chr8.2:70602608-70602627 None:intergenic 40.0%
CTGTCAAGCCATGAATAATG+GGG + chr8.2:70602179-70602198 MS.gene067288:CDS 40.0%
GTACCAACTTAACGTGATTC+CGG + chr8.2:70601690-70601709 MS.gene067288:CDS 40.0%
GTGCTTAATGGTTACTGTAC+AGG + chr8.2:70600444-70600463 MS.gene067288:intron 40.0%
TAAGGAGCCTTAAATGGGAA+AGG - chr8.2:70600907-70600926 None:intergenic 40.0%
TACCAACTTAACGTGATTCC+GGG + chr8.2:70601691-70601710 MS.gene067288:CDS 40.0%
TATACCATTAACAGTCACCC+AGG + chr8.2:70601129-70601148 MS.gene067288:CDS 40.0%
TATGACACGGAGTCATTGAA+TGG + chr8.2:70602360-70602379 MS.gene067288:CDS 40.0%
TCTTCTTGTGCGTAAACAAC+AGG - chr8.2:70600541-70600560 None:intergenic 40.0%
TGTAGCCATGGATGTGAATT+GGG - chr8.2:70602467-70602486 None:intergenic 40.0%
TTAACAATCGTGGAAGCTGA+TGG + chr8.2:70601787-70601806 MS.gene067288:CDS 40.0%
TTAACAGCCAGCTTATCATC+AGG - chr8.2:70602036-70602055 None:intergenic 40.0%
TTCAATGACTCCGTGTCATA+TGG - chr8.2:70602360-70602379 None:intergenic 40.0%
TTTGGCATGCTCATGTTTCT+TGG + chr8.2:70600830-70600849 MS.gene067288:CDS 40.0%
TTTGTTTGGGTGTCTTTGAG+TGG - chr8.2:70602158-70602177 None:intergenic 40.0%
! ATGAAGTGTCAATGTGGCAT+AGG - chr8.2:70601268-70601287 None:intergenic 40.0%
! CAACTCATTTTGCAGAACAC+AGG + chr8.2:70602420-70602439 MS.gene067288:CDS 40.0%
! GCCATGGAATATTTTCCTAC+TGG - chr8.2:70601895-70601914 None:intergenic 40.0%
! TAGGGTACCTTTCCCATTTA+AGG + chr8.2:70600897-70600916 MS.gene067288:CDS 40.0%
!! AGACAGTCATGGATGGATTA+AGG + chr8.2:70602055-70602074 MS.gene067288:CDS 40.0%
!! GCTTCTAGGATTGGAATATG+GGG - chr8.2:70602243-70602262 None:intergenic 40.0%
!!! CATGGCTTGACAGTTTTGTT+TGG - chr8.2:70602172-70602191 None:intergenic 40.0%
AAACTCTGGCCTGCTTGAAT+TGG - chr8.2:70600769-70600788 None:intergenic 45.0%
AACATGATGGCAGATCTGGA+GGG - chr8.2:70602948-70602967 None:intergenic 45.0%
AACTTAACGTGATTCCGGGA+AGG + chr8.2:70601695-70601714 MS.gene067288:CDS 45.0%
ACAATCCTGCCAGACTTGTA+AGG - chr8.2:70601925-70601944 None:intergenic 45.0%
AGGACATTCAGTGTTTGACC+TGG - chr8.2:70601856-70601875 None:intergenic 45.0%
ATACACCAATCATGGGGACT+AGG + chr8.2:70602868-70602887 MS.gene067288:CDS 45.0%
ATGGTATATGCATCTGCTGG+AGG - chr8.2:70601117-70601136 None:intergenic 45.0%
CAACGTAAAAGCTGTAGCCA+TGG - chr8.2:70602479-70602498 None:intergenic 45.0%
CTGCAAAATGAGTTGCACCT+TGG - chr8.2:70602415-70602434 None:intergenic 45.0%
CTGGTTGATCAGCTGAAACT+AGG - chr8.2:70601876-70601895 None:intergenic 45.0%
CTGTAGCCATGGATGTGAAT+TGG - chr8.2:70602468-70602487 None:intergenic 45.0%
CTTAACAAGTAGGTCCTTCC+CGG - chr8.2:70601712-70601731 None:intergenic 45.0%
GAAGAATGGAGAAGGAGATC+TGG + chr8.2:70602906-70602925 MS.gene067288:CDS 45.0%
GAGCTAATTCGGAATATGGC+AGG + chr8.2:70601027-70601046 MS.gene067288:intron 45.0%
GCACCTTGGTACCATATTCA+AGG - chr8.2:70602401-70602420 None:intergenic 45.0%
GCCAGCTTATCATCAGGTTT+AGG - chr8.2:70602030-70602049 None:intergenic 45.0%
GCTAATTCGGAATATGGCAG+GGG + chr8.2:70601029-70601048 MS.gene067288:intron 45.0%
GCTGTTAAGACAGTCATGGA+TGG + chr8.2:70602048-70602067 MS.gene067288:CDS 45.0%
GGAATATGGCAGGGGAATAT+TGG + chr8.2:70601037-70601056 MS.gene067288:intron 45.0%
GGTCCTTGAATATGGTACCA+AGG + chr8.2:70602395-70602414 MS.gene067288:CDS 45.0%
GTTTCAGCTGATCAACCAGT+AGG + chr8.2:70601877-70601896 MS.gene067288:CDS 45.0%
TAACATGATGGCAGATCTGG+AGG - chr8.2:70602949-70602968 None:intergenic 45.0%
TACGTTGTAGGATATGGCAC+AGG + chr8.2:70602492-70602511 MS.gene067288:CDS 45.0%
TGTCAGCACCCCATTATTCA+TGG - chr8.2:70602190-70602209 None:intergenic 45.0%
TGTTTCTTGGCTGAGAGGAA+CGG + chr8.2:70600843-70600862 MS.gene067288:CDS 45.0%
TTCCCGGAATCACGTTAAGT+TGG - chr8.2:70601696-70601715 None:intergenic 45.0%
! CGTTTTGTGGCTGATAATCC+AGG + chr8.2:70602606-70602625 MS.gene067288:CDS 45.0%
! GGCTACAGCTTTTACGTTGT+AGG + chr8.2:70602480-70602499 MS.gene067288:CDS 45.0%
!! GGGAAAGGTACCCTATTCTT+TGG - chr8.2:70600892-70600911 None:intergenic 45.0%
!! TGCTCAATTTGTTAGGGGGA+GGG - chr8.2:70602711-70602730 None:intergenic 45.0%
ACATGATGGCAGATCTGGAG+GGG - chr8.2:70602947-70602966 None:intergenic 50.0%
AGCAGTTGTAGTTAGGGCCT+GGG - chr8.2:70601149-70601168 None:intergenic 50.0%
ATCACCGTGTCTGTGGTGAA+TGG - chr8.2:70601826-70601845 None:intergenic 50.0%
CAGCTATCATGCTGGTACGA+CGG + chr8.2:70600721-70600740 MS.gene067288:CDS 50.0%
CATGCCACTCTAGTCAATGG+AGG + chr8.2:70601084-70601103 MS.gene067288:CDS 50.0%
CCAATCATGGGGACTAGGAA+TGG + chr8.2:70602873-70602892 MS.gene067288:CDS 50.0%
CCATTCCTAGTCCCCATGAT+TGG - chr8.2:70602876-70602895 None:intergenic 50.0%
CTTGTAAGGTGCAACAGCCA+TGG - chr8.2:70601911-70601930 None:intergenic 50.0%
GAAGCCATTCACCACAGACA+CGG + chr8.2:70601819-70601838 MS.gene067288:CDS 50.0%
GAGCATGCCACTCTAGTCAA+TGG + chr8.2:70601081-70601100 MS.gene067288:CDS 50.0%
GCTCATGTTTCTTGGCTGAG+AGG + chr8.2:70600838-70600857 MS.gene067288:CDS 50.0%
GCTGGCTGTTAAGACAGTCA+TGG + chr8.2:70602044-70602063 MS.gene067288:CDS 50.0%
GCTGTTGCACCTTACAAGTC+TGG + chr8.2:70601913-70601932 MS.gene067288:CDS 50.0%
GTATATGCATCTGCTGGAGG+TGG - chr8.2:70601114-70601133 None:intergenic 50.0%
GTGCAAGGGGAGAATCAACA+AGG + chr8.2:70600306-70600325 MS.gene067288:CDS 50.0%
TAGTGGCAGAGATCAAACCC+CGG - chr8.2:70602679-70602698 None:intergenic 50.0%
TGTGCGTAAACAACAGGTCC+TGG - chr8.2:70600535-70600554 None:intergenic 50.0%
TTGCACCTTACAAGTCTGGC+AGG + chr8.2:70601917-70601936 MS.gene067288:CDS 50.0%
TTGGCTAACATGGTGCATGG+TGG + chr8.2:70601495-70601514 MS.gene067288:intron 50.0%
! AGCTCCTCCATTGACTAGAG+TGG - chr8.2:70601091-70601110 None:intergenic 50.0%
! TAGAACTTAGAGGGTGCGTC+AGG - chr8.2:70602306-70602325 None:intergenic 50.0%
!! GGGGAGGGAGAATTTGTTAG+TGG - chr8.2:70602696-70602715 None:intergenic 50.0%
!! GTGCTCAATTTGTTAGGGGG+AGG - chr8.2:70602712-70602731 None:intergenic 50.0%
ACAATTGGAGTTCCGGTCGG+TGG + chr8.2:70602570-70602589 MS.gene067288:CDS 55.0%
ACCACAGACACGGTGATGCT+TGG + chr8.2:70601829-70601848 MS.gene067288:CDS 55.0%
ACCAGCATGATAGCTGCTGC+CGG - chr8.2:70600717-70600736 None:intergenic 55.0%
AGGGCCTGGGTGACTGTTAA+TGG - chr8.2:70601136-70601155 None:intergenic 55.0%
CATGATGGCAGATCTGGAGG+GGG - chr8.2:70602946-70602965 None:intergenic 55.0%
CCAGTGCCTATGCAGTCTCA+TGG - chr8.2:70601563-70601582 None:intergenic 55.0%
CCATGAGACTGCATAGGCAC+TGG + chr8.2:70601560-70601579 MS.gene067288:intron 55.0%
GAGCAGTTGTAGTTAGGGCC+TGG - chr8.2:70601150-70601169 None:intergenic 55.0%
TCCAAGCATCACCGTGTCTG+TGG - chr8.2:70601833-70601852 None:intergenic 55.0%
TGGCTGAGAGGAACGGTTCA+TGG + chr8.2:70600850-70600869 MS.gene067288:CDS 55.0%
! ATGGGCAGCTGTCCGTTTTG+TGG + chr8.2:70602593-70602612 MS.gene067288:CDS 55.0%
GACACGGTGATGCTTGGACC+AGG + chr8.2:70601835-70601854 MS.gene067288:CDS 60.0%
TCCGGCAGCAGCTATCATGC+TGG + chr8.2:70600713-70600732 MS.gene067288:CDS 60.0%
TGGAGTTCCGGTCGGTGGAT+GGG + chr8.2:70602575-70602594 MS.gene067288:CDS 60.0%
TTGGAGTTCCGGTCGGTGGA+TGG + chr8.2:70602574-70602593 MS.gene067288:CDS 60.0%
! GGCAGGGGAATATTGGCTGC+AGG + chr8.2:70601044-70601063 MS.gene067288:intron 60.0%
ACAGCTGCCCATCCACCGAC+CGG - chr8.2:70602585-70602604 None:intergenic 65.0%
GGCAGATCTGGAGGGGGATG+TGG - chr8.2:70602940-70602959 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 70600296 70602969 70600296 ID=MS.gene067288
chr8.2 mRNA 70600296 70602969 70600296 ID=MS.gene067288.t1;Parent=MS.gene067288
chr8.2 exon 70600296 70600343 70600296 ID=MS.gene067288.t1.exon1;Parent=MS.gene067288.t1
chr8.2 CDS 70600296 70600343 70600296 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
chr8.2 exon 70600466 70600617 70600466 ID=MS.gene067288.t1.exon2;Parent=MS.gene067288.t1
chr8.2 CDS 70600466 70600617 70600466 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
chr8.2 exon 70600705 70600949 70600705 ID=MS.gene067288.t1.exon3;Parent=MS.gene067288.t1
chr8.2 CDS 70600705 70600949 70600705 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
chr8.2 exon 70601049 70601177 70601049 ID=MS.gene067288.t1.exon4;Parent=MS.gene067288.t1
chr8.2 CDS 70601049 70601177 70601049 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
chr8.2 exon 70601686 70602627 70601686 ID=MS.gene067288.t1.exon5;Parent=MS.gene067288.t1
chr8.2 CDS 70601686 70602627 70601686 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
chr8.2 exon 70602839 70602969 70602839 ID=MS.gene067288.t1.exon6;Parent=MS.gene067288.t1
chr8.2 CDS 70602839 70602969 70602839 ID=cds.MS.gene067288.t1;Parent=MS.gene067288.t1
Gene Sequence

>MS.gene067288

ATGGCACATGGTGCAAGGGGAGAATCAACAAGGTTCTATGATTTTAAGGTATTTTCTTTGTTCCATTTTGACCTTCACATTTGTAGAAAAAATATTTCTATTTATTTGTGGTTTTCAAAGTTCAAAAGCAATATTAACTATTGTTGATGTGCTTAATGGTTACTGTACAGGTTCAAACTAAAAGAGTTGCAAAACTTTGCAACTCAAAAGACATTGTCACAGTCAATGGTATGTATCCAGGACCTGTTGTTTACGCACAAGAAGATGACAGAATCATAGTCAAGGTTACCAATAAGACACCTTTCAATGTTACAATTCACTGGTAATTTCAAGCACAACCTCATACATAATGCAGTTCATTTAATTAAAAATGATAATTTAACTAACAAACTTTATTTTCAAATTTTAGGCATGGTATCCGGCAGCAGCTATCATGCTGGTACGACGGACCGTCCTTTATTACACAATGTCCAATTCAAGCAGGCCAGAGTTTCACTTATAACTTTACAGTGGTGAATCAAAAGGGCACTTTCTTTTGGCATGCTCATGTTTCTTGGCTGAGAGGAACGGTTCATGGAGCTATGATTGTTTATCCAAAGAATAGGGTACCTTTCCCATTTAAGGCTCCTTATCAAGAGCAACTAATTATACTAGGTAACTTAAATGTGGTTCCTTTGGTTTGAATTCAATGTTTCAAGTTGTATGTTTTCTCTATACAACACTAATGTTGTGAGCTAATTCGGAATATGGCAGGGGAATATTGGCTGCAGGATCTTCAACAAATTGAGCATGCCACTCTAGTCAATGGAGGAGCTCCACCTCCAGCAGATGCATATACCATTAACAGTCACCCAGGCCCTAACTACAACTGCTCAATTAATGGTATTTTTGAGATAAAAGAAGATAAATACCAAGTGATAGTGAAAATATTGATTTCATTTAATGGGGGTTCCTTAATATTGTATACAACCTATGCCACATTGACACTTCATACTGAAAACATGTCTGGTGTCAAACACTGACACAACTGACACGCTCAATCATTCTATTTTCTTAAATTATTACTGGTCTCTACGTGAATGTTTCAATGTGATTTTTTATGTCCGTGTATGTGTTAGTGCTTCATAGTATACAACTAACAATGTCAGTGATTATTTTATAAAGGGATGGCTCAATCAGATTAAGTTACGTAAAATAATTTGGCTAACATGGTGCATGGTGGTAATCTTTTTTCACTAAGAATCTATTGACACCATAACAATATCCATGAGACTGCATAGGCACTGGTCTTCTAAACCAGTCTAAGACAATTGGCAACTCACAACTTTGTAGTTTAAATTTTCTATCTTCAGTTTTCACTTACATGTTTCATTTTCTATTATCTTTTCAGATGTGTACCAACTTAACGTGATTCCGGGAAGGACCTACTTGTTAAGACTAATTAATGCAGGTTTAAACACTGAGAACTTCTTTGCCATTGCAAATCACAACTTAACAATCGTGGAAGCTGATGGTGAATACACGAAGCCATTCACCACAGACACGGTGATGCTTGGACCAGGTCAAACACTGAATGTCCTAGTTTCAGCTGATCAACCAGTAGGAAAATATTCCATGGCTGTTGCACCTTACAAGTCTGGCAGGATTGTCAAATATCAAAATGTTTCAGCCATAGCCTACTTCAATTATATAGGGGCAGAATCTAACTGTTCATATTTACCAGCTAAATTACCTAAACCTGATGATAAGCTGGCTGTTAAGACAGTCATGGATGGATTAAGGAGCCTATATCAAGTGAATGTTTTCAAAGAAATCGATAAAAATATATTCATCACCATTGGATTGAATGTTAAAAAATGCCACTCAAAGACACCCAAACAAAACTGTCAAGCCATGAATAATGGGGTGCTGACAGCTTCAATGAACAATATAAGTTTCGTTCATCCCCATATTCCAATCCTAGAAGCTTATTATAAGAAAATAAATGGATCGTACACTGAAGATTTTCCTGACGCACCCTCTAAGTTCTACGACTTCGTTAATGGTGCTCCTAACAACATTCCATATGACACGGAGTCATTGAATGGAACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTGCAACTCATTTTGCAGAACACAGGAACAGTCAACATTGAAAATCACCCAATTCACATCCATGGCTACAGCTTTTACGTTGTAGGATATGGCACAGGCAACTATAATCCACTAACTGCACAATTCAATTTGGTGGATCCCCCATATATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCTGTCCGTTTTGTGGCTGATAATCCAGGTATACACCTCATCAATGTATATTTCATTTTTCCATTTTACTAAACATCCGGGGTTTGATCTCTGCCACTAACAAATTCTCCCTCCCCCTAACAAATTGAGCACTAACATTTGCATATAAAAAAAAAAAACACGAAACTGTTGATTTCTTTTTTTCTTTTTGGCTGAAGGAATTATTCATTTCTTATAGTCAATGGTATAACTTTTTGCAGGTGTGTGGTACATGCACTGTCACATTGATATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAGAAGGAGATCTGGAGTCTTTACCACATCCCCCTCCAGATCTGCCATCATGTTAA
Protein sequence

>MS.gene067288.t1

MAHGARGESTRFYDFKVQTKRVAKLCNSKDIVTVNGMYPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGIRQQLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRVPFPFKAPYQEQLIILGEYWLQDLQQIEHATLVNGGAPPPADAYTINSHPGPNYNCSINDVYQLNVIPGRTYLLRLINAGLNTENFFAIANHNLTIVEADGEYTKPFTTDTVMLGPGQTLNVLVSADQPVGKYSMAVAPYKSGRIVKYQNVSAIAYFNYIGAESNCSYLPAKLPKPDDKLAVKTVMDGLRSLYQVNVFKEIDKNIFITIGLNVKKCHSKTPKQNCQAMNNGVLTASMNNISFVHPHIPILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYNPLTAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGEGDLESLPHPPPDLPSC