AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047086

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047086.t1 MTR_2g008330 95.337 579 27 0 1 579 1 579 0.0 1134
MS.gene047086.t1 MTR_3g101640 55.026 567 246 6 19 579 8 571 0.0 634
MS.gene047086.t1 MTR_3g101635 54.137 556 241 5 13 562 2 549 0.0 613
MS.gene047086.t1 MTR_5g083360 50.000 568 269 6 19 579 8 567 0.0 595
MS.gene047086.t1 MTR_5g073210 49.020 561 274 6 22 579 9 560 0.0 583
MS.gene047086.t1 MTR_5g020620 49.462 558 272 5 22 579 14 561 0.0 567
MS.gene047086.t1 MTR_5g069680 49.023 563 277 4 17 579 6 558 0.0 563
MS.gene047086.t1 MTR_7g458880 47.304 575 285 7 20 579 9 580 0.0 551
MS.gene047086.t1 MTR_7g062310 48.182 550 274 5 38 579 47 593 0.0 547
MS.gene047086.t1 MTR_7g062250 47.295 573 289 7 14 579 12 578 0.0 545
MS.gene047086.t1 MTR_7g060460 47.079 582 289 8 14 579 3 581 0.0 540
MS.gene047086.t1 MTR_7g058690 46.540 578 294 8 14 579 6 580 0.0 538
MS.gene047086.t1 MTR_3g462760 48.540 548 271 5 32 579 20 556 0.0 538
MS.gene047086.t1 MTR_5g020600 46.771 573 289 7 14 579 3 566 0.0 537
MS.gene047086.t1 MTR_3g071890 50.000 522 247 6 19 535 14 526 0.0 531
MS.gene047086.t1 MTR_5g081810 48.983 541 261 7 40 579 3 529 0.0 527
MS.gene047086.t1 MTR_4g015120 47.978 544 275 4 36 579 22 557 0.0 527
MS.gene047086.t1 MTR_4g064530 44.708 548 295 6 19 562 25 568 4.27e-172 501
MS.gene047086.t1 MTR_7g065980 45.115 563 294 7 27 579 14 571 6.56e-172 499
MS.gene047086.t1 MTR_4g019225 44.102 551 293 6 39 579 27 572 6.34e-169 492
MS.gene047086.t1 MTR_7g065970 42.757 573 306 8 16 579 11 570 1.54e-160 471
MS.gene047086.t1 MTR_4g064530 44.423 529 286 6 19 543 25 549 4.21e-160 469
MS.gene047086.t1 MTR_8g027375 41.065 582 314 9 16 579 1 571 7.93e-156 458
MS.gene047086.t1 MTR_8g091390 32.437 558 314 18 30 557 26 550 1.64e-73 245
MS.gene047086.t1 MTR_5g081790 45.091 275 137 6 264 537 159 420 3.04e-67 225
MS.gene047086.t1 MTR_5g081790 45.509 167 84 1 18 177 4 170 1.57e-41 155
MS.gene047086.t1 MTR_3g078740 32.849 551 300 19 53 557 41 567 7.56e-64 220
MS.gene047086.t1 MTR_3g078700 30.986 568 306 20 19 557 8 518 5.45e-61 211
MS.gene047086.t1 MTR_3g078730 30.473 571 316 17 14 557 1 517 1.50e-60 210
MS.gene047086.t1 MTR_3g115050 28.489 523 332 15 59 579 51 533 2.26e-45 168
MS.gene047086.t1 MTR_1g090707 27.955 533 345 17 52 579 38 536 9.84e-42 159
MS.gene047086.t1 MTR_4g075690 27.186 526 334 14 59 579 51 532 3.74e-41 157
MS.gene047086.t1 MTR_8g479390 27.358 530 322 18 42 559 35 513 4.62e-40 153
MS.gene047086.t1 MTR_1g026410 26.616 526 338 13 59 579 50 532 6.35e-40 153
MS.gene047086.t1 MTR_3g008580 25.090 554 351 15 13 544 5 516 1.42e-38 150
MS.gene047086.t1 MTR_4g101650 25.565 575 385 16 17 579 6 549 3.40e-38 149
MS.gene047086.t1 MTR_8g479380 27.273 506 319 15 59 559 50 511 3.89e-38 148
MS.gene047086.t1 MTR_4g049390 25.475 526 344 14 59 579 48 530 1.32e-37 146
MS.gene047086.t1 MTR_2g088080 25.565 575 377 15 13 579 2 533 9.53e-37 144
MS.gene047086.t1 MTR_4g075690 27.955 440 269 13 59 493 51 447 5.36e-35 137
MS.gene047086.t1 MTR_4g048350 25.475 526 343 16 59 579 48 529 9.31e-35 138
MS.gene047086.t1 MTR_4g132320 27.725 523 336 15 59 579 52 534 3.97e-33 134
MS.gene047086.t1 MTR_8g073840 37.097 186 78 4 32 216 24 171 2.81e-32 126
MS.gene047086.t1 MTR_5g018270 25.954 524 314 18 52 559 45 510 4.61e-31 127
MS.gene047086.t1 MTR_3g083390 23.741 556 373 16 16 560 1 516 5.88e-31 127
MS.gene047086.t1 MTR_3g083400 24.237 557 369 16 16 560 1 516 1.41e-30 126
MS.gene047086.t1 MTR_3g083440 23.741 556 373 16 16 560 1 516 1.52e-30 126
MS.gene047086.t1 MTR_3g083450 23.917 531 355 15 39 560 27 517 2.46e-30 125
MS.gene047086.t1 MTR_3g083430 22.868 551 384 14 16 560 1 516 9.84e-30 124
MS.gene047086.t1 MTR_4g083210 25.227 551 356 18 21 559 5 511 2.28e-29 122
MS.gene047086.t1 MTR_3g083410 24.219 512 337 15 59 560 10 480 6.43e-29 120
MS.gene047086.t1 MTR_7g051440 24.748 497 337 14 56 544 47 514 8.16e-27 115
MS.gene047086.t1 MTR_2g088080 24.646 495 325 13 90 579 1 452 4.47e-26 112
MS.gene047086.t1 MTR_4g083190 24.758 517 332 17 56 559 45 517 2.33e-25 110
MS.gene047086.t1 MTR_7g058670 46.914 81 42 1 95 174 13 93 2.04e-19 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047086.t1 AT5G09360 66.961 566 177 4 15 579 13 569 0.0 808
MS.gene047086.t1 AT5G05390 49.479 576 276 5 8 579 1 565 0.0 595
MS.gene047086.t1 AT2G30210 48.705 579 281 9 8 579 1 570 0.0 578
MS.gene047086.t1 AT2G40370 46.632 579 291 4 15 579 6 580 0.0 575
MS.gene047086.t1 AT5G48100 50.269 557 261 11 18 566 4 552 0.0 561
MS.gene047086.t1 AT5G07130 47.461 571 281 10 19 579 8 569 0.0 553
MS.gene047086.t1 AT2G29130 47.028 572 292 7 16 579 5 573 0.0 544
MS.gene047086.t1 AT5G58910 46.903 565 291 4 16 579 11 567 0.0 541
MS.gene047086.t1 AT5G58910 46.903 565 290 5 16 579 11 566 0.0 539
MS.gene047086.t1 AT2G38080 46.986 564 289 5 16 579 5 558 0.0 539
MS.gene047086.t1 AT5G60020 47.130 575 287 7 19 579 6 577 0.0 538
MS.gene047086.t1 AT1G18140 47.368 551 275 5 42 579 33 581 0.0 535
MS.gene047086.t1 AT5G60020 48.346 544 264 7 50 579 5 545 0.0 528
MS.gene047086.t1 AT5G03260 47.059 561 287 5 19 579 7 557 0.0 526
MS.gene047086.t1 AT5G58910 47.646 531 265 4 50 579 5 523 9.47e-179 515
MS.gene047086.t1 AT5G01190 46.441 562 291 5 20 579 5 558 1.14e-178 516
MS.gene047086.t1 AT5G01190 47.810 525 266 4 55 579 28 544 1.41e-171 498
MS.gene047086.t1 AT2G46570 43.134 568 308 6 17 579 12 569 1.90e-167 488
MS.gene047086.t1 AT5G60020 46.717 533 267 7 19 537 6 535 1.82e-165 482
MS.gene047086.t1 AT3G09220 42.701 548 304 4 20 562 8 550 8.64e-164 479
MS.gene047086.t1 AT5G07130 47.143 490 243 9 100 579 1 484 5.19e-160 466
MS.gene047086.t1 AT5G07130 47.143 490 243 9 100 579 1 484 5.19e-160 466
MS.gene047086.t1 AT5G01050 41.696 566 309 7 24 579 14 568 1.09e-156 461
MS.gene047086.t1 AT5G01040 40.314 573 325 9 15 579 3 566 1.24e-151 448
MS.gene047086.t1 AT2G46570 43.265 490 264 5 95 579 4 484 3.91e-144 426
MS.gene047086.t1 AT3G09220 44.201 457 245 4 111 562 2 453 4.31e-137 407
MS.gene047086.t1 AT5G21105 31.250 592 338 18 1 557 1 558 8.56e-75 249
MS.gene047086.t1 AT4G39830 31.315 578 326 20 16 557 18 560 1.03e-73 246
MS.gene047086.t1 AT5G21100 31.059 557 324 17 31 558 17 542 4.81e-70 236
MS.gene047086.t1 AT5G21105 30.420 572 329 18 1 537 1 538 1.29e-65 224
MS.gene047086.t1 AT4G39830 29.757 494 281 18 99 557 3 465 5.17e-52 186
MS.gene047086.t1 AT4G39830 29.796 490 278 18 103 557 5 463 3.62e-51 183
MS.gene047086.t1 AT4G39830 29.412 493 271 17 99 557 3 452 4.55e-49 177
MS.gene047086.t1 AT5G21105 33.236 343 191 9 225 557 53 367 1.33e-42 157
MS.gene047086.t1 AT1G76160 25.565 575 380 16 8 579 1 530 2.24e-42 160
MS.gene047086.t1 AT5G66920 26.030 534 335 15 56 579 55 538 9.35e-40 153
MS.gene047086.t1 AT1G21850 26.168 535 344 13 20 548 11 500 2.19e-39 152
MS.gene047086.t1 AT1G75790 25.303 577 356 15 16 571 5 527 2.37e-39 152
MS.gene047086.t1 AT1G41830 26.326 528 336 16 59 579 50 531 2.99e-39 151
MS.gene047086.t1 AT4G22010 26.792 530 333 16 59 579 47 530 2.34e-37 146
MS.gene047086.t1 AT5G51480 26.186 527 351 15 56 572 46 544 2.92e-37 146
MS.gene047086.t1 AT1G21860 25.655 534 352 14 18 548 9 500 3.80e-35 139
MS.gene047086.t1 AT4G28090 24.203 533 345 13 59 579 49 534 4.25e-34 136
MS.gene047086.t1 AT4G12420 24.304 539 369 14 16 544 3 512 1.53e-33 135
MS.gene047086.t1 AT4G12420 24.304 539 369 14 16 544 3 512 1.53e-33 135
MS.gene047086.t1 AT4G25240 24.729 554 356 15 40 572 31 544 2.78e-33 134
MS.gene047086.t1 AT4G25240 24.729 554 356 15 40 572 31 544 2.78e-33 134
MS.gene047086.t1 AT5G48450 25.294 510 338 16 48 551 39 511 1.34e-32 132
MS.gene047086.t1 AT5G48450 25.296 506 335 16 52 551 43 511 1.85e-32 132
MS.gene047086.t1 AT4G37160 25.568 528 347 14 56 579 49 534 9.02e-32 129
MS.gene047086.t1 AT4G38420 26.078 487 326 13 59 544 51 504 5.93e-31 127
MS.gene047086.t1 AT2G23630 25.285 526 350 13 56 579 48 532 9.86e-30 124
MS.gene047086.t1 AT2G23630 25.285 526 350 13 56 579 53 537 9.98e-30 124
MS.gene047086.t1 AT3G13390 26.326 509 329 15 39 539 29 499 5.97e-29 121
MS.gene047086.t1 AT4G38420 25.847 472 300 14 59 521 51 481 6.67e-27 114
MS.gene047086.t1 AT1G55570 24.764 529 360 16 15 539 6 500 5.16e-26 112
MS.gene047086.t1 AT1G55560 23.738 535 373 14 15 547 4 505 7.26e-25 109
MS.gene047086.t1 AT4G38420 25.676 444 281 13 59 493 51 454 8.62e-25 108
MS.gene047086.t1 AT4G37160 25.566 442 284 13 56 493 49 449 4.42e-23 102
MS.gene047086.t1 AT3G13400 24.385 488 330 15 56 539 45 497 4.69e-22 100
MS.gene047086.t1 AT3G13400 24.385 488 330 15 56 539 45 497 4.69e-22 100

Find 124 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATGTTTCCTGGTTTAAT+TGG 0.126373 2.3:-74209725 None:intergenic
AAGAACATCTTGACGGTAAA+TGG 0.152634 2.3:+74208275 MS.gene047086:CDS
TATGTGGTTGGTTGGGGTTT+TGG 0.178246 2.3:+74211355 MS.gene047086:CDS
ATTGCAACCCAACCATTATT+TGG 0.185427 2.3:-74211451 None:intergenic
AATTCCCTTGTTGGAATTCT+TGG 0.186318 2.3:-74211172 None:intergenic
GTTGGGTTGCAATCAGATTC+AGG 0.246152 2.3:+74211461 MS.gene047086:CDS
AATCCCTGGTGTATTTGATA+TGG 0.281231 2.3:+74211144 MS.gene047086:CDS
TGGCACAAAGGTGTTGGTTT+TGG 0.288255 2.3:+74211243 MS.gene047086:CDS
ACTCCAACTGTAGTTTCTTC+TGG 0.301445 2.3:-74211427 None:intergenic
GGGCACTGTGTTATGTATTC+AGG 0.301563 2.3:-74209704 None:intergenic
AGCATTTGTGTTTGAGCATT+AGG 0.301879 2.3:-74211847 None:intergenic
TTACTACAAGTCTTAACATT+TGG 0.307789 2.3:-74211890 None:intergenic
AGATCATACTCTAGTGCTTT+TGG 0.308424 2.3:+74210776 MS.gene047086:CDS
TAGTTTCTATGTGGTTGGTT+GGG 0.309756 2.3:+74211348 MS.gene047086:CDS
ACCTCTTGGTCATTATTTCA+TGG 0.311028 2.3:+74210748 MS.gene047086:CDS
TTCAAGATGATTGTGGACTA+TGG 0.317009 2.3:+74210548 MS.gene047086:CDS
CTTCTGATTCATACTGCAAA+TGG 0.327732 2.3:+74208103 MS.gene047086:CDS
ACGGTAAATGGGCAATTTCC+TGG 0.329717 2.3:+74208287 MS.gene047086:CDS
GATCACACCTGGTCAATCTA+TGG 0.338540 2.3:+74210703 MS.gene047086:CDS
ATTTACCGTCAAGATGTTCT+TGG 0.347797 2.3:-74208273 None:intergenic
TACTACAAGTCTTAACATTT+GGG 0.349805 2.3:-74211889 None:intergenic
GAGTGAGTACCTAGTATAAT+TGG 0.350857 2.3:-74209896 None:intergenic
GTATATGCATTTGATAGAAT+TGG 0.350961 2.3:-74210304 None:intergenic
GCACTTAGAAAATCAATATA+TGG 0.356869 2.3:-74211109 None:intergenic
GCATTTGTGTTTGAGCATTA+GGG 0.362250 2.3:-74211846 None:intergenic
TCAATCTATGGACATTCTAA+TGG 0.365197 2.3:+74210715 MS.gene047086:CDS
ATAGTTTCTATGTGGTTGGT+TGG 0.375505 2.3:+74211347 MS.gene047086:CDS
GGGATAAGTGTGTCCAGGTT+TGG 0.377288 2.3:-74209849 None:intergenic
ATTTGTTTGAACATGTTTCC+TGG 0.392779 2.3:-74209734 None:intergenic
GGATAAGTGTGTCCAGGTTT+GGG 0.396428 2.3:-74209848 None:intergenic
CCAAATGTAGCAAACAAAAC+TGG 0.402762 2.3:+74210274 MS.gene047086:CDS
AGTTTCTATGTGGTTGGTTG+GGG 0.402880 2.3:+74211349 MS.gene047086:CDS
TTGACAGTAGTTGGTAAAGA+TGG 0.411673 2.3:+74210644 MS.gene047086:CDS
GCACCGGTCCGTTCGGCAAA+AGG 0.412322 2.3:+74211050 MS.gene047086:CDS
TGCTACTTGGGGAATGAGTA+TGG 0.412639 2.3:+74211804 MS.gene047086:CDS
TTTGCCGAACGGACCGGTGC+AGG 0.415932 2.3:-74211047 None:intergenic
GGAGGAAGTCGAGGAAGAAT+TGG 0.418765 2.3:-74210875 None:intergenic
CCTCTATGAGCTTTCAATGT+TGG 0.425691 2.3:-74208311 None:intergenic
ACATGTTTCCTGGTTTAATT+GGG 0.426379 2.3:-74209724 None:intergenic
ACATAGAACGACATGCTACT+TGG 0.436248 2.3:+74211791 MS.gene047086:CDS
ATCATTAGGCTAGGATCATA+TGG 0.438368 2.3:-74208025 None:intergenic
ACTTGTTGGAGACCATCATT+AGG 0.441748 2.3:-74208039 None:intergenic
ATAACCAGGTTGACCATTGA+TGG 0.442649 2.3:-74210326 None:intergenic
CTATATCCATGCAAATGAAC+AGG 0.445873 2.3:-74211328 None:intergenic
AATCACAAATTGACAGTAGT+TGG 0.450124 2.3:+74210635 MS.gene047086:CDS
TAACATTTGGGTAAATCCAC+AGG 0.451931 2.3:-74211877 None:intergenic
GGAACCTCAGCATGAGGTCT+AGG 0.453899 2.3:-74209875 None:intergenic
GTGTAATTGAATTCCCTTGT+TGG 0.454393 2.3:-74211181 None:intergenic
AAACCCTGCACCGGTCCGTT+CGG 0.454937 2.3:+74211043 MS.gene047086:CDS
TGGGCAAGAGCTACAGTTCA+TGG 0.456344 2.3:+74209809 MS.gene047086:CDS
ACAGTTGGAGTACCAAATAA+TGG 0.463114 2.3:+74211439 MS.gene047086:CDS
CATAGAACGACATGCTACTT+GGG 0.475889 2.3:+74211792 MS.gene047086:CDS
AGAACATCTTGACGGTAAAT+GGG 0.476613 2.3:+74208276 MS.gene047086:CDS
AATCATCCTGTTCATTTGCA+TGG 0.478004 2.3:+74211322 MS.gene047086:CDS
TCAAATGCATATACCATCAA+TGG 0.479246 2.3:+74210313 MS.gene047086:CDS
TTCTGATTCATACTGCAAAT+GGG 0.486110 2.3:+74208104 MS.gene047086:CDS
GGATATAGTTTCTATGTGGT+TGG 0.486226 2.3:+74211343 MS.gene047086:CDS
TTGTTATGTTATAATTTGCC+TGG 0.490301 2.3:-74208361 None:intergenic
TGGAGTACCAAATAATGGTT+GGG 0.492921 2.3:+74211444 MS.gene047086:CDS
CCACAGAAGAAGGAACAATA+TGG 0.493286 2.3:+74209768 MS.gene047086:CDS
GCCTATTACTATAAAATCCC+TGG 0.494025 2.3:+74211130 MS.gene047086:CDS
TTGCCGAACGGACCGGTGCA+GGG 0.495451 2.3:-74211046 None:intergenic
ATGGAAGCAAATCAACCTCT+TGG 0.497551 2.3:+74210734 MS.gene047086:CDS
CCATATTGTTCCTTCTTCTG+TGG 0.503475 2.3:-74209768 None:intergenic
ATCATTTGGCACAAAGGTGT+TGG 0.508419 2.3:+74211237 MS.gene047086:CDS
TTGGAGTACCAAATAATGGT+TGG 0.516173 2.3:+74211443 MS.gene047086:CDS
TTGGGTTGCAATCAGATTCA+GGG 0.517163 2.3:+74211462 MS.gene047086:CDS
GCTGAGGTTCCAATTATACT+AGG 0.523541 2.3:+74209887 MS.gene047086:CDS
GTACATTTGACCACAGAAGA+AGG 0.530014 2.3:+74209758 MS.gene047086:CDS
TTCATCATTGTGTAGGAGAG+TGG 0.531122 2.3:+74210227 MS.gene047086:intron
CCAACTGTAGTTTCTTCTGG+TGG 0.531712 2.3:-74211424 None:intergenic
GATTATTATGATCAGGTATG+TGG 0.532303 2.3:+74211755 MS.gene047086:intron
ATATGGTGGCATGCACATAA+TGG 0.535939 2.3:+74209785 MS.gene047086:CDS
AGATTCAGGGCTAATAATCC+AGG 0.536934 2.3:+74211475 MS.gene047086:CDS
AGATACTTTCAAGATGATTG+TGG 0.540499 2.3:+74210541 MS.gene047086:intron
TAATACCAAGAACATCTTGA+CGG 0.543194 2.3:+74208268 MS.gene047086:CDS
TTGGAGACCATCATTAGGCT+AGG 0.543627 2.3:-74208034 None:intergenic
TCAGCATGAGGTCTAGGAAA+GGG 0.546258 2.3:-74209869 None:intergenic
TAGAATAATCAATGCAGTAA+TGG 0.547126 2.3:+74210586 MS.gene047086:CDS
ATATGATCCTAGCCTAATGA+TGG 0.553978 2.3:+74208027 MS.gene047086:CDS
GTCATCATTTATCCCAAACC+TGG 0.555922 2.3:+74209836 MS.gene047086:CDS
GTGGCATGCACATAATGGTT+GGG 0.556314 2.3:+74209790 MS.gene047086:CDS
GGAAAGGGATAAGTGTGTCC+AGG 0.561390 2.3:-74209854 None:intergenic
GTGAGGAATCCATGGTCAGA+TGG 0.564085 2.3:+74209680 MS.gene047086:CDS
TTGTTGTAAGGAGGAAGTCG+AGG 0.567093 2.3:-74210884 None:intergenic
TGAGCTTTCAATGTTGGACC+AGG 0.567139 2.3:-74208305 None:intergenic
ATATATAAGTAAAGCTGTTG+TGG 0.568070 2.3:-74210819 None:intergenic
CAAGACAAGTGAGGAATCCA+TGG 0.569953 2.3:+74209672 MS.gene047086:CDS
AGTTCACCATCACAAGTTTG+TGG 0.574574 2.3:+74208129 MS.gene047086:CDS
GTGTTGAGCTTGTACTGCAA+GGG 0.574618 2.3:+74211278 MS.gene047086:CDS
TATACCATCAATGGTCAACC+TGG 0.579809 2.3:+74210322 MS.gene047086:CDS
ATGGTGTTTCTAGTGAAAGA+TGG 0.581000 2.3:+74211823 MS.gene047086:CDS
GAGCAGGGATATAGATAACC+AGG 0.581388 2.3:-74210340 None:intergenic
ATCATTGTGTAGGAGAGTGG+TGG 0.583215 2.3:+74210230 MS.gene047086:intron
ATTATAACATAACAATACAT+TGG 0.589097 2.3:+74208369 MS.gene047086:CDS
CACATACCACAAACTTGTGA+TGG 0.592974 2.3:-74208135 None:intergenic
GTGGTGGAAAGAACAAGTAA+TGG 0.600140 2.3:+74210246 MS.gene047086:CDS
AACATTTGGGTAAATCCACA+GGG 0.604694 2.3:-74211876 None:intergenic
AGGAGATACACTTATAGTCA+AGG 0.607058 2.3:+74208331 MS.gene047086:CDS
CTTTCCTAGACCTCATGCTG+AGG 0.607483 2.3:+74209871 MS.gene047086:CDS
CCAACATTGAAAGCTCATAG+AGG 0.607627 2.3:+74208311 MS.gene047086:CDS
CTCAGCATGAGGTCTAGGAA+AGG 0.608161 2.3:-74209870 None:intergenic
AGTGTTTGGTTGCAGGCATG+GGG 0.609053 2.3:+74209649 MS.gene047086:intron
CCACCAGAAGAAACTACAGT+TGG 0.610287 2.3:+74211424 MS.gene047086:CDS
GCATGGATATAGTTTCTATG+TGG 0.621455 2.3:+74211339 MS.gene047086:CDS
GGTGGCATGCACATAATGGT+TGG 0.624194 2.3:+74209789 MS.gene047086:CDS
GAGTACATCATTTGGCACAA+AGG 0.625602 2.3:+74211231 MS.gene047086:CDS
TATAGTCAAGGTCTATAACC+AGG 0.630200 2.3:+74208343 MS.gene047086:CDS
AAATCCATATCAAATACACC+AGG 0.642912 2.3:-74211148 None:intergenic
ATAGAACGACATGCTACTTG+GGG 0.646193 2.3:+74211793 MS.gene047086:CDS
AGTGTTGAGCTTGTACTGCA+AGG 0.646230 2.3:+74211277 MS.gene047086:CDS
GCCATGAAATAATGACCAAG+AGG 0.649971 2.3:-74210749 None:intergenic
ATAATTGGAACCTCAGCATG+AGG 0.653847 2.3:-74209881 None:intergenic
ACTCAAGATAAACCCTGCAC+CGG 0.659837 2.3:+74211034 MS.gene047086:CDS
ACACAGTGCCCAATTAAACC+AGG 0.662581 2.3:+74209716 MS.gene047086:CDS
TATTCAGGTCCATCTGACCA+TGG 0.664643 2.3:-74209689 None:intergenic
GATTACATAATGATCACACC+TGG 0.671979 2.3:+74210692 MS.gene047086:CDS
AATGTAGCAAACAAAACTGG+AGG 0.677923 2.3:+74210277 MS.gene047086:CDS
AGAATGTCCATAGATTGACC+AGG 0.687147 2.3:-74210710 None:intergenic
CAGAAGAAGGAACAATATGG+TGG 0.689108 2.3:+74209771 MS.gene047086:CDS
CATTTGGGTAAATCCACAGG+GGG 0.698591 2.3:-74211874 None:intergenic
AATCCATATCAAATACACCA+GGG 0.715174 2.3:-74211147 None:intergenic
GGCATGGGGCAAGACAAGTG+AGG 0.729322 2.3:+74209663 MS.gene047086:intron
ACATTTGGGTAAATCCACAG+GGG 0.779821 2.3:-74211875 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATGTACAAATTATA+TGG - chr2.3:74208411-74208430 None:intergenic 10.0%
!!! AGTATATCATTTTTATTTTT+AGG - chr2.3:74211645-74211664 None:intergenic 10.0%
!!! GTAATTTTAAAGAAATTAAT+GGG - chr2.3:74208579-74208598 None:intergenic 10.0%
!!! GTTTTCAAAAATAAAAATTT+GGG + chr2.3:74208486-74208505 MS.gene047086:intron 10.0%
!!! TAATTTTAAAGAAATTAATG+GGG - chr2.3:74208578-74208597 None:intergenic 10.0%
!!! TGTAATTTTAAAGAAATTAA+TGG - chr2.3:74208580-74208599 None:intergenic 10.0%
!!! TGTTTTCAAAAATAAAAATT+TGG + chr2.3:74208485-74208504 MS.gene047086:intron 10.0%
!!! TTTTAAACTCTTAAAAAATA+TGG + chr2.3:74208893-74208912 MS.gene047086:intron 10.0%
!! AATATTTGATTATTATGATC+AGG + chr2.3:74211748-74211767 MS.gene047086:intron 15.0%
!! ACAAAAAAAAAAAACTAAGA+CGG - chr2.3:74208807-74208826 None:intergenic 15.0%
!! ATGTAATTTAGTTATATCAA+TGG + chr2.3:74209581-74209600 MS.gene047086:intron 15.0%
!! ATTATAACATAACAATACAT+TGG + chr2.3:74208369-74208388 MS.gene047086:CDS 15.0%
!! CTAAAATAAGACAAAATATT+GGG + chr2.3:74210179-74210198 MS.gene047086:intron 15.0%
!! TGGTTTCTTAAAAAAAAAAT+TGG - chr2.3:74211692-74211711 None:intergenic 15.0%
!!! AATTTTAAAGAAATTAATGG+GGG - chr2.3:74208577-74208596 None:intergenic 15.0%
!!! ACAGTGTTATAATTTTAATT+TGG - chr2.3:74211712-74211731 None:intergenic 15.0%
!!! ATCAATAAGATTATAGTTTT+TGG - chr2.3:74211404-74211423 None:intergenic 15.0%
!!! ATTATGTAATCTGTTTTTAT+TGG - chr2.3:74210683-74210702 None:intergenic 15.0%
!!! GTTTTTATCTTTAATGTATT+TGG + chr2.3:74209520-74209539 MS.gene047086:intron 15.0%
!!! TCAATAAGATTATAGTTTTT+GGG - chr2.3:74211403-74211422 None:intergenic 15.0%
!!! TCTAAAATAAGACAAAATAT+TGG + chr2.3:74210178-74210197 MS.gene047086:intron 15.0%
!!! TGTTATTTTCACTAATAAAT+TGG + chr2.3:74209178-74209197 MS.gene047086:intron 15.0%
!!! TTAGTTTTTTTTTTTTGTAG+TGG + chr2.3:74208809-74208828 MS.gene047086:intron 15.0%
!!! TTTTGTCTTATTTTAGATTT+TGG - chr2.3:74210175-74210194 None:intergenic 15.0%
!!! TTTTTGAAAACAAATAACTT+TGG - chr2.3:74208477-74208496 None:intergenic 15.0%
!!! TTTTTTATGATGTGATATAA+AGG - chr2.3:74210099-74210118 None:intergenic 15.0%
!! AACACTTAGAGTAATTATTT+AGG + chr2.3:74209260-74209279 MS.gene047086:intron 20.0%
!! AATGTACAAATTATATGGTT+TGG - chr2.3:74208406-74208425 None:intergenic 20.0%
!! CATAAAATATTCATTCCTTT+AGG + chr2.3:74209021-74209040 MS.gene047086:intron 20.0%
!! TAGAAATAAAAAACGTGATT+AGG + chr2.3:74209401-74209420 MS.gene047086:intron 20.0%
!! TGATGTACTCAAAAAATATT+CGG - chr2.3:74211221-74211240 None:intergenic 20.0%
!!! AAAATATGATTTGATAGTGT+AGG - chr2.3:74210386-74210405 None:intergenic 20.0%
!!! ATTTTAAAGAAATTAATGGG+GGG - chr2.3:74208576-74208595 None:intergenic 20.0%
!!! GTTCAAGATGTTAAAATTTT+TGG + chr2.3:74208060-74208079 MS.gene047086:CDS 20.0%
!!! TATTTTTTGAGTACATCATT+TGG + chr2.3:74211223-74211242 MS.gene047086:CDS 20.0%
!!! TGATATAAAGGTACTTATAA+TGG - chr2.3:74210087-74210106 None:intergenic 20.0%
!!! TGTCAATTTGTGATTTTTAA+TGG - chr2.3:74210630-74210649 None:intergenic 20.0%
!!! TTTTTATCAGAGAACTTAAT+TGG - chr2.3:74209450-74209469 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTAGTGGT+CGG + chr2.3:74208813-74208832 MS.gene047086:intron 20.0%
! AAAATAACAAGTTCCAAATC+TGG - chr2.3:74209167-74209186 None:intergenic 25.0%
! AAGTATCTATAAACATCACA+AGG - chr2.3:74210529-74210548 None:intergenic 25.0%
! AATGCATTAGATTCATTTGA+AGG + chr2.3:74209098-74209117 MS.gene047086:intron 25.0%
! ACAAGGAAAAACTAATGTTT+AGG - chr2.3:74210512-74210531 None:intergenic 25.0%
! AGTAAACTGTAAAAATTTGG+TGG + chr2.3:74209074-74209093 MS.gene047086:intron 25.0%
! ATATATAAGTAAAGCTGTTG+TGG - chr2.3:74210822-74210841 None:intergenic 25.0%
! ATGCATTAGATTCATTTGAA+GGG + chr2.3:74209099-74209118 MS.gene047086:intron 25.0%
! ATGTATTCAGCCATATAAAA+AGG - chr2.3:74209927-74209946 None:intergenic 25.0%
! CAAGGAAAAACTAATGTTTA+GGG - chr2.3:74210511-74210530 None:intergenic 25.0%
! CTCTGATAAAAAATAGTCAT+CGG + chr2.3:74209458-74209477 MS.gene047086:intron 25.0%
! GAGAGTAAACTGTAAAAATT+TGG + chr2.3:74209071-74209090 MS.gene047086:intron 25.0%
! GATGTACTCAAAAAATATTC+GGG - chr2.3:74211220-74211239 None:intergenic 25.0%
! GCACTTAGAAAATCAATATA+TGG - chr2.3:74211112-74211131 None:intergenic 25.0%
! GTATATGCATTTGATAGAAT+TGG - chr2.3:74210307-74210326 None:intergenic 25.0%
! TAAATCACGTCTTAAACATT+AGG - chr2.3:74209297-74209316 None:intergenic 25.0%
! TAGAATAATCAATGCAGTAA+TGG + chr2.3:74210586-74210605 MS.gene047086:CDS 25.0%
! TGGCATAAAAATGAGTTATT+AGG - chr2.3:74210067-74210086 None:intergenic 25.0%
! TGTATTCAGCCATATAAAAA+GGG - chr2.3:74209926-74209945 None:intergenic 25.0%
!! ACTTTTGTAGGAACATTTAT+TGG - chr2.3:74210968-74210987 None:intergenic 25.0%
!! ATAAAAATTTGGGTTCAACT+TGG + chr2.3:74208496-74208515 MS.gene047086:intron 25.0%
!! TTGTTATGTTATAATTTGCC+TGG - chr2.3:74208364-74208383 None:intergenic 25.0%
!! TTTGCAAATATATCACCTTT+TGG - chr2.3:74211621-74211640 None:intergenic 25.0%
!! TTTGTTAGTCTGAGTTAAAT+TGG + chr2.3:74209339-74209358 MS.gene047086:intron 25.0%
!! TTTTAACATCTTGAACTTGT+TGG - chr2.3:74208056-74208075 None:intergenic 25.0%
!!! AAATTTTGAAAAAGTTCACC+TGG - chr2.3:74211496-74211515 None:intergenic 25.0%
!!! ACTTAATTGGTTACTTTTAG+TGG - chr2.3:74209437-74209456 None:intergenic 25.0%
!!! GTTGGACATTTTGAAAATTA+AGG + chr2.3:74210148-74210167 MS.gene047086:intron 25.0%
!!! TAGTTTTTGGGATCTTTTTT+AGG - chr2.3:74211391-74211410 None:intergenic 25.0%
!!! TATGATTGATTAGAAGTGTT+TGG + chr2.3:74209635-74209654 MS.gene047086:intron 25.0%
!!! TTTTTTTTTTTGTAGTGGTC+GGG + chr2.3:74208814-74208833 MS.gene047086:intron 25.0%
AAAATGTTGGGACATTAGAA+GGG - chr2.3:74209322-74209341 None:intergenic 30.0%
AAATCCATATCAAATACACC+AGG - chr2.3:74211151-74211170 None:intergenic 30.0%
AACATGTTTCCTGGTTTAAT+TGG - chr2.3:74209728-74209747 None:intergenic 30.0%
AACTCAGACTAACAAAATGT+TGG - chr2.3:74209335-74209354 None:intergenic 30.0%
AATCACAAATTGACAGTAGT+TGG + chr2.3:74210635-74210654 MS.gene047086:CDS 30.0%
AATCCATATCAAATACACCA+GGG - chr2.3:74211150-74211169 None:intergenic 30.0%
ACATGTTTCCTGGTTTAATT+GGG - chr2.3:74209727-74209746 None:intergenic 30.0%
ACTCAGACTAACAAAATGTT+GGG - chr2.3:74209334-74209353 None:intergenic 30.0%
AGATACTTTCAAGATGATTG+TGG + chr2.3:74210541-74210560 MS.gene047086:intron 30.0%
ATAAAACACCAAAGACCAAA+AGG + chr2.3:74211603-74211622 MS.gene047086:intron 30.0%
ATCGTAGAAAGTCAAAATTG+AGG - chr2.3:74209988-74210007 None:intergenic 30.0%
ATTTGTTTGAACATGTTTCC+TGG - chr2.3:74209737-74209756 None:intergenic 30.0%
CATAACAATACATTGGTATG+TGG + chr2.3:74208376-74208395 MS.gene047086:intron 30.0%
CATTACACAGTATATATGCA+AGG - chr2.3:74208853-74208872 None:intergenic 30.0%
CGTAAATGAGACAGAATAAA+AGG - chr2.3:74209957-74209976 None:intergenic 30.0%
CTAGTGCATTTGTATTCTTT+GGG + chr2.3:74208526-74208545 MS.gene047086:intron 30.0%
GATTATTATGATCAGGTATG+TGG + chr2.3:74211755-74211774 MS.gene047086:intron 30.0%
GTACATCTTTAGTAAAGTCT+AGG + chr2.3:74209366-74209385 MS.gene047086:intron 30.0%
GTATTCTTTGGGCATAATTT+GGG + chr2.3:74208537-74208556 MS.gene047086:intron 30.0%
TAATACCAAGAACATCTTGA+CGG + chr2.3:74208268-74208287 MS.gene047086:CDS 30.0%
TAATCATATATACCGACAAG+AGG - chr2.3:74210452-74210471 None:intergenic 30.0%
TCAAATGCATATACCATCAA+TGG + chr2.3:74210313-74210332 MS.gene047086:CDS 30.0%
TCAATCTATGGACATTCTAA+TGG + chr2.3:74210715-74210734 MS.gene047086:CDS 30.0%
TCTCTATCACTAACTTATGA+TGG + chr2.3:74208168-74208187 MS.gene047086:intron 30.0%
TGTATTCTTTGGGCATAATT+TGG + chr2.3:74208536-74208555 MS.gene047086:intron 30.0%
TTATTCTTATGAGCCAGATT+TGG + chr2.3:74209151-74209170 MS.gene047086:intron 30.0%
TTCTGATTCATACTGCAAAT+GGG + chr2.3:74208104-74208123 MS.gene047086:CDS 30.0%
! AAATGTGTGTCAACTTTTGT+AGG - chr2.3:74210980-74210999 None:intergenic 30.0%
! AATCAAAGAGAGTGTGTTAA+AGG + chr2.3:74210410-74210429 MS.gene047086:intron 30.0%
! ACCAGGGATTTTATAGTAAT+AGG - chr2.3:74211134-74211153 None:intergenic 30.0%
! ATTTTCCAAGAATTCCAACA+AGG + chr2.3:74211167-74211186 MS.gene047086:CDS 30.0%
! TGACATTTTCATCATTGTGT+AGG + chr2.3:74210220-74210239 MS.gene047086:intron 30.0%
! TTCTGTCTCATTTACGATTT+TGG + chr2.3:74209961-74209980 MS.gene047086:intron 30.0%
! TTTTCCAAGAATTCCAACAA+GGG + chr2.3:74211168-74211187 MS.gene047086:CDS 30.0%
! TTTTCCCATCTATGCATTTA+GGG - chr2.3:74210126-74210145 None:intergenic 30.0%
! TTTTTCCCATCTATGCATTT+AGG - chr2.3:74210127-74210146 None:intergenic 30.0%
!! ATATATCACCTTTTGGTCTT+TGG - chr2.3:74211614-74211633 None:intergenic 30.0%
!! ATATGATTTGATAGTGTAGG+AGG - chr2.3:74210383-74210402 None:intergenic 30.0%
!! TATGATTTGATAGTGTAGGA+GGG - chr2.3:74210382-74210401 None:intergenic 30.0%
!! TCTTTAAAATTACACCCTAC+CGG + chr2.3:74208586-74208605 MS.gene047086:intron 30.0%
!!! TTGGCTTTTTTTTGTGATGA+TGG - chr2.3:74210859-74210878 None:intergenic 30.0%
!!! TTTTTTTTTTGTAGTGGTCG+GGG + chr2.3:74208815-74208834 MS.gene047086:intron 30.0%
AAACTATTTGTGCTTTCTGC+AGG + chr2.3:74208217-74208236 MS.gene047086:intron 35.0%
AACATTTGGGTAAATCCACA+GGG - chr2.3:74211879-74211898 None:intergenic 35.0%
AAGAACATCTTGACGGTAAA+TGG + chr2.3:74208275-74208294 MS.gene047086:CDS 35.0%
AATCATCCTGTTCATTTGCA+TGG + chr2.3:74211322-74211341 MS.gene047086:CDS 35.0%
AATCCCTGGTGTATTTGATA+TGG + chr2.3:74211144-74211163 MS.gene047086:CDS 35.0%
AATGTAGCAAACAAAACTGG+AGG + chr2.3:74210277-74210296 MS.gene047086:CDS 35.0%
AATTCCCTTGTTGGAATTCT+TGG - chr2.3:74211175-74211194 None:intergenic 35.0%
ACCTCTTGGTCATTATTTCA+TGG + chr2.3:74210748-74210767 MS.gene047086:CDS 35.0%
AGAACATCTTGACGGTAAAT+GGG + chr2.3:74208276-74208295 MS.gene047086:CDS 35.0%
AGCATTTGTGTTTGAGCATT+AGG - chr2.3:74211850-74211869 None:intergenic 35.0%
AGGAGATACACTTATAGTCA+AGG + chr2.3:74208331-74208350 MS.gene047086:CDS 35.0%
ATAGTTTCTATGTGGTTGGT+TGG + chr2.3:74211347-74211366 MS.gene047086:CDS 35.0%
ATATGATCCTAGCCTAATGA+TGG + chr2.3:74208027-74208046 MS.gene047086:CDS 35.0%
ATCAACCCTAAATGCATAGA+TGG + chr2.3:74210118-74210137 MS.gene047086:intron 35.0%
ATCATTAGGCTAGGATCATA+TGG - chr2.3:74208028-74208047 None:intergenic 35.0%
ATTGCAACCCAACCATTATT+TGG - chr2.3:74211454-74211473 None:intergenic 35.0%
ATTTACCGTCAAGATGTTCT+TGG - chr2.3:74208276-74208295 None:intergenic 35.0%
CAAAATGTTGGGACATTAGA+AGG - chr2.3:74209323-74209342 None:intergenic 35.0%
CCAAATGTAGCAAACAAAAC+TGG + chr2.3:74210274-74210293 MS.gene047086:CDS 35.0%
CTATATCCATGCAAATGAAC+AGG - chr2.3:74211331-74211350 None:intergenic 35.0%
CTATCACTAACTTATGATGG+TGG + chr2.3:74208171-74208190 MS.gene047086:intron 35.0%
CTTCTGATTCATACTGCAAA+TGG + chr2.3:74208103-74208122 MS.gene047086:CDS 35.0%
GAGTGAGTACCTAGTATAAT+TGG - chr2.3:74209899-74209918 None:intergenic 35.0%
GATTACATAATGATCACACC+TGG + chr2.3:74210692-74210711 MS.gene047086:CDS 35.0%
GCATGGATATAGTTTCTATG+TGG + chr2.3:74211339-74211358 MS.gene047086:CDS 35.0%
GCATTTGTGTTTGAGCATTA+GGG - chr2.3:74211849-74211868 None:intergenic 35.0%
GCCTATTACTATAAAATCCC+TGG + chr2.3:74211130-74211149 MS.gene047086:CDS 35.0%
GCTAGTGCATTTGTATTCTT+TGG + chr2.3:74208525-74208544 MS.gene047086:intron 35.0%
GGATATAGTTTCTATGTGGT+TGG + chr2.3:74211343-74211362 MS.gene047086:CDS 35.0%
GTGTAATTGAATTCCCTTGT+TGG - chr2.3:74211184-74211203 None:intergenic 35.0%
TAACATTTGGGTAAATCCAC+AGG - chr2.3:74211880-74211899 None:intergenic 35.0%
TATAGTCAAGGTCTATAACC+AGG + chr2.3:74208343-74208362 MS.gene047086:CDS 35.0%
TCAACCCTAAATGCATAGAT+GGG + chr2.3:74210119-74210138 MS.gene047086:intron 35.0%
TCAGCCATATAAAAAGGGTA+AGG - chr2.3:74209921-74209940 None:intergenic 35.0%
TGCATAGATGGGAAAAATGT+TGG + chr2.3:74210130-74210149 MS.gene047086:intron 35.0%
! ACAGTTGGAGTACCAAATAA+TGG + chr2.3:74211439-74211458 MS.gene047086:CDS 35.0%
! AGATCATACTCTAGTGCTTT+TGG + chr2.3:74210776-74210795 MS.gene047086:CDS 35.0%
! CACTCCTTACCCTTTTTATA+TGG + chr2.3:74209914-74209933 MS.gene047086:intron 35.0%
! GTACATGTTTCTATGTATCG+TGG + chr2.3:74209605-74209624 MS.gene047086:intron 35.0%
! TAGTTTCTATGTGGTTGGTT+GGG + chr2.3:74211348-74211367 MS.gene047086:CDS 35.0%
! TCCTTTAGGAAAGAGTAAGT+CGG + chr2.3:74209035-74209054 MS.gene047086:intron 35.0%
! TGGAGTACCAAATAATGGTT+GGG + chr2.3:74211444-74211463 MS.gene047086:CDS 35.0%
! TTCAAGATGATTGTGGACTA+TGG + chr2.3:74210548-74210567 MS.gene047086:CDS 35.0%
! TTGGAGTACCAAATAATGGT+TGG + chr2.3:74211443-74211462 MS.gene047086:CDS 35.0%
! TTGGATGAGTTTTTGTAGCA+AGG - chr2.3:74210949-74210968 None:intergenic 35.0%
! TTTAAAATTACACCCTACCG+GGG + chr2.3:74208588-74208607 MS.gene047086:intron 35.0%
! TTTGGGTTCAACTTGGATAT+TGG + chr2.3:74208503-74208522 MS.gene047086:intron 35.0%
!! ATGATTTGATAGTGTAGGAG+GGG - chr2.3:74210381-74210400 None:intergenic 35.0%
!! ATGGTGTTTCTAGTGAAAGA+TGG + chr2.3:74211823-74211842 MS.gene047086:CDS 35.0%
!! CTTTAAAATTACACCCTACC+GGG + chr2.3:74208587-74208606 MS.gene047086:intron 35.0%
!! GATGCTTCTGTTTTGTTGTA+AGG - chr2.3:74210899-74210918 None:intergenic 35.0%
!! TTGACAGTAGTTGGTAAAGA+TGG + chr2.3:74210644-74210663 MS.gene047086:CDS 35.0%
!!! CCAGTTTTGTTTGCTACATT+TGG - chr2.3:74210277-74210296 None:intergenic 35.0%
ACAGTATATATGCAAGGTCC+AGG - chr2.3:74208847-74208866 None:intergenic 40.0%
ACATAGAACGACATGCTACT+TGG + chr2.3:74211791-74211810 MS.gene047086:CDS 40.0%
ACATTTGGGTAAATCCACAG+GGG - chr2.3:74211878-74211897 None:intergenic 40.0%
ACCGACAAGAGGAATGTTAA+AGG - chr2.3:74210441-74210460 None:intergenic 40.0%
ACTCCAACTGTAGTTTCTTC+TGG - chr2.3:74211430-74211449 None:intergenic 40.0%
AGAATGTCCATAGATTGACC+AGG - chr2.3:74210713-74210732 None:intergenic 40.0%
AGATTCAGGGCTAATAATCC+AGG + chr2.3:74211475-74211494 MS.gene047086:CDS 40.0%
AGTTCACCATCACAAGTTTG+TGG + chr2.3:74208129-74208148 MS.gene047086:CDS 40.0%
ATAATTGGAACCTCAGCATG+AGG - chr2.3:74209884-74209903 None:intergenic 40.0%
ATATGGTGGCATGCACATAA+TGG + chr2.3:74209785-74209804 MS.gene047086:CDS 40.0%
ATGGAAGCAAATCAACCTCT+TGG + chr2.3:74210734-74210753 MS.gene047086:CDS 40.0%
CACATACCACAAACTTGTGA+TGG - chr2.3:74208138-74208157 None:intergenic 40.0%
CAGAAGAAGGAACAATATGG+TGG + chr2.3:74209771-74209790 MS.gene047086:CDS 40.0%
CAGTATATATGCAAGGTCCA+GGG - chr2.3:74208846-74208865 None:intergenic 40.0%
CCAACATTGAAAGCTCATAG+AGG + chr2.3:74208311-74208330 MS.gene047086:CDS 40.0%
CCACAGAAGAAGGAACAATA+TGG + chr2.3:74209768-74209787 MS.gene047086:CDS 40.0%
CCATATTGTTCCTTCTTCTG+TGG - chr2.3:74209771-74209790 None:intergenic 40.0%
CCTCTATGAGCTTTCAATGT+TGG - chr2.3:74208314-74208333 None:intergenic 40.0%
CTATATCCCTGCTCCAAAAA+AGG + chr2.3:74210349-74210368 MS.gene047086:CDS 40.0%
GAGTACATCATTTGGCACAA+AGG + chr2.3:74211231-74211250 MS.gene047086:CDS 40.0%
GCCATGAAATAATGACCAAG+AGG - chr2.3:74210752-74210771 None:intergenic 40.0%
GCCTTTAACATTCCTCTTGT+CGG + chr2.3:74210437-74210456 MS.gene047086:intron 40.0%
GCTGAGGTTCCAATTATACT+AGG + chr2.3:74209887-74209906 MS.gene047086:CDS 40.0%
GTACATTTGACCACAGAAGA+AGG + chr2.3:74209758-74209777 MS.gene047086:CDS 40.0%
GTCATCATTTATCCCAAACC+TGG + chr2.3:74209836-74209855 MS.gene047086:CDS 40.0%
TATACCATCAATGGTCAACC+TGG + chr2.3:74210322-74210341 MS.gene047086:CDS 40.0%
TTCATCATTGTGTAGGAGAG+TGG + chr2.3:74210227-74210246 MS.gene047086:intron 40.0%
! ACAGTGTGTGAAGTATTCCT+CGG - chr2.3:74209489-74209508 None:intergenic 40.0%
! ACTTGTTGGAGACCATCATT+AGG - chr2.3:74208042-74208061 None:intergenic 40.0%
! AGTTTCTATGTGGTTGGTTG+GGG + chr2.3:74211349-74211368 MS.gene047086:CDS 40.0%
! ATAACCAGGTTGACCATTGA+TGG - chr2.3:74210329-74210348 None:intergenic 40.0%
! ATAGAACGACATGCTACTTG+GGG + chr2.3:74211793-74211812 MS.gene047086:CDS 40.0%
! ATCATTTGGCACAAAGGTGT+TGG + chr2.3:74211237-74211256 MS.gene047086:CDS 40.0%
! CATAGAACGACATGCTACTT+GGG + chr2.3:74211792-74211811 MS.gene047086:CDS 40.0%
! CCTTTAGGAAAGAGTAAGTC+GGG + chr2.3:74209036-74209055 MS.gene047086:intron 40.0%
! GTGGTGGAAAGAACAAGTAA+TGG + chr2.3:74210246-74210265 MS.gene047086:CDS 40.0%
! TTGGGTTGCAATCAGATTCA+GGG + chr2.3:74211462-74211481 MS.gene047086:CDS 40.0%
!! GATTAGAAGTGTTTGGTTGC+AGG + chr2.3:74209642-74209661 MS.gene047086:intron 40.0%
!! GCTTCTGTTTTGTTGTAAGG+AGG - chr2.3:74210896-74210915 None:intergenic 40.0%
AAGTGTTTGGTTGCAGGCAT+GGG + chr2.3:74209648-74209667 MS.gene047086:intron 45.0%
ACACAGTGCCCAATTAAACC+AGG + chr2.3:74209716-74209735 MS.gene047086:CDS 45.0%
ACGGTAAATGGGCAATTTCC+TGG + chr2.3:74208287-74208306 MS.gene047086:CDS 45.0%
ACTCAAGATAAACCCTGCAC+CGG + chr2.3:74211034-74211053 MS.gene047086:CDS 45.0%
ATCATTGTGTAGGAGAGTGG+TGG + chr2.3:74210230-74210249 MS.gene047086:intron 45.0%
ATGACGTGACATTGTCTTCG+AGG + chr2.3:74210034-74210053 MS.gene047086:intron 45.0%
CAAATTGACAAACCCCGGTA+GGG - chr2.3:74208603-74208622 None:intergenic 45.0%
CAAGACAAGTGAGGAATCCA+TGG + chr2.3:74209672-74209691 MS.gene047086:CDS 45.0%
CATTTGGGTAAATCCACAGG+GGG - chr2.3:74211877-74211896 None:intergenic 45.0%
CCAACTGTAGTTTCTTCTGG+TGG - chr2.3:74211427-74211446 None:intergenic 45.0%
CCACCAGAAGAAACTACAGT+TGG + chr2.3:74211424-74211443 MS.gene047086:CDS 45.0%
CCCGACTTACTCTTTCCTAA+AGG - chr2.3:74209039-74209058 None:intergenic 45.0%
GAGCAGGGATATAGATAACC+AGG - chr2.3:74210343-74210362 None:intergenic 45.0%
GATCACACCTGGTCAATCTA+TGG + chr2.3:74210703-74210722 MS.gene047086:CDS 45.0%
GGATAAGTGTGTCCAGGTTT+GGG - chr2.3:74209851-74209870 None:intergenic 45.0%
GTGGCATGCACATAATGGTT+GGG + chr2.3:74209790-74209809 MS.gene047086:CDS 45.0%
GTGTTGAGCTTGTACTGCAA+GGG + chr2.3:74211278-74211297 MS.gene047086:CDS 45.0%
TATTCAGGTCCATCTGACCA+TGG - chr2.3:74209692-74209711 None:intergenic 45.0%
TCAGCATGAGGTCTAGGAAA+GGG - chr2.3:74209872-74209891 None:intergenic 45.0%
TGAGCTTTCAATGTTGGACC+AGG - chr2.3:74208308-74208327 None:intergenic 45.0%
TTAGGAAAGAGTAAGTCGGG+TGG + chr2.3:74209039-74209058 MS.gene047086:intron 45.0%
TTGGAGACCATCATTAGGCT+AGG - chr2.3:74208037-74208056 None:intergenic 45.0%
TTGTTGTAAGGAGGAAGTCG+AGG - chr2.3:74210887-74210906 None:intergenic 45.0%
! AGTGTTGAGCTTGTACTGCA+AGG + chr2.3:74211277-74211296 MS.gene047086:CDS 45.0%
! GGGCACTGTGTTATGTATTC+AGG - chr2.3:74209707-74209726 None:intergenic 45.0%
! GTTGGGTTGCAATCAGATTC+AGG + chr2.3:74211461-74211480 MS.gene047086:CDS 45.0%
! TGCTACTTGGGGAATGAGTA+TGG + chr2.3:74211804-74211823 MS.gene047086:CDS 45.0%
!! ATGTGGTTGGTTGGGGTTTT+GGG + chr2.3:74211356-74211375 MS.gene047086:CDS 45.0%
!! TACTCTAGTGCTTTTGGTGC+TGG + chr2.3:74210782-74210801 MS.gene047086:CDS 45.0%
!! TATGTGGTTGGTTGGGGTTT+TGG + chr2.3:74211355-74211374 MS.gene047086:CDS 45.0%
!!! AGTGGACCTTTTTTGGAGCA+GGG - chr2.3:74210358-74210377 None:intergenic 45.0%
!!! TGGCACAAAGGTGTTGGTTT+TGG + chr2.3:74211243-74211262 MS.gene047086:CDS 45.0%
AATAGTCATCGGCAAAGCCG+AGG + chr2.3:74209469-74209488 MS.gene047086:intron 50.0%
AGTGTTTGGTTGCAGGCATG+GGG + chr2.3:74209649-74209668 MS.gene047086:intron 50.0%
CCAAATTGACAAACCCCGGT+AGG - chr2.3:74208604-74208623 None:intergenic 50.0%
CCGGGGTTTGTCAATTTGGA+CGG + chr2.3:74208605-74208624 MS.gene047086:intron 50.0%
CCGTCCAAATTGACAAACCC+CGG - chr2.3:74208608-74208627 None:intergenic 50.0%
CCTACCGGGGTTTGTCAATT+TGG + chr2.3:74208601-74208620 MS.gene047086:intron 50.0%
CTCAGCATGAGGTCTAGGAA+AGG - chr2.3:74209873-74209892 None:intergenic 50.0%
CTTTCCTAGACCTCATGCTG+AGG + chr2.3:74209871-74209890 MS.gene047086:CDS 50.0%
GGAAAGGGATAAGTGTGTCC+AGG - chr2.3:74209857-74209876 None:intergenic 50.0%
GGAGGAAGTCGAGGAAGAAT+TGG - chr2.3:74210878-74210897 None:intergenic 50.0%
GGGATAAGTGTGTCCAGGTT+TGG - chr2.3:74209852-74209871 None:intergenic 50.0%
GGTGGCATGCACATAATGGT+TGG + chr2.3:74209789-74209808 MS.gene047086:CDS 50.0%
GTGAGGAATCCATGGTCAGA+TGG + chr2.3:74209680-74209699 MS.gene047086:CDS 50.0%
TGGGCAAGAGCTACAGTTCA+TGG + chr2.3:74209809-74209828 MS.gene047086:CDS 50.0%
! AAACCTTTTGCCGAACGGAC+CGG - chr2.3:74211056-74211075 None:intergenic 50.0%
! GAAGTGTTTGGTTGCAGGCA+TGG + chr2.3:74209647-74209666 MS.gene047086:intron 50.0%
! GCTGCAAACCTTTTGCCGAA+CGG - chr2.3:74211061-74211080 None:intergenic 50.0%
!! TTGATAGTGTAGGAGGGGAG+TGG - chr2.3:74210376-74210395 None:intergenic 50.0%
!!! GAGTGGACCTTTTTTGGAGC+AGG - chr2.3:74210359-74210378 None:intergenic 50.0%
GGAACCTCAGCATGAGGTCT+AGG - chr2.3:74209878-74209897 None:intergenic 55.0%
TTGGGTAAATCCACAGGGGG+CGG - chr2.3:74211874-74211893 None:intergenic 55.0%
!!! GGAGGGGAGTGGACCTTTTT+TGG - chr2.3:74210365-74210384 None:intergenic 55.0%
ACAAATGCTTCCGCCCCCTG+TGG + chr2.3:74211861-74211880 MS.gene047086:CDS 60.0%
GGCATGGGGCAAGACAAGTG+AGG + chr2.3:74209663-74209682 MS.gene047086:intron 60.0%
TAGTGGTCGGGGTTGAACCC+TGG + chr2.3:74208826-74208845 MS.gene047086:intron 60.0%
! AAACCCTGCACCGGTCCGTT+CGG + chr2.3:74211043-74211062 MS.gene047086:CDS 60.0%
TTGCCGAACGGACCGGTGCA+GGG - chr2.3:74211049-74211068 None:intergenic 65.0%
TTTGCCGAACGGACCGGTGC+AGG - chr2.3:74211050-74211069 None:intergenic 65.0%
! GCACCGGTCCGTTCGGCAAA+AGG + chr2.3:74211050-74211069 MS.gene047086:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 74208022 74211900 74208022 ID=MS.gene047086
chr2.3 mRNA 74208022 74211900 74208022 ID=MS.gene047086.t1;Parent=MS.gene047086
chr2.3 exon 74208022 74208150 74208022 ID=MS.gene047086.t1.exon1;Parent=MS.gene047086.t1
chr2.3 CDS 74208022 74208150 74208022 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
chr2.3 exon 74208239 74208390 74208239 ID=MS.gene047086.t1.exon2;Parent=MS.gene047086.t1
chr2.3 CDS 74208239 74208390 74208239 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
chr2.3 exon 74209664 74209908 74209664 ID=MS.gene047086.t1.exon3;Parent=MS.gene047086.t1
chr2.3 CDS 74209664 74209908 74209664 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
chr2.3 exon 74210242 74210370 74210242 ID=MS.gene047086.t1.exon4;Parent=MS.gene047086.t1
chr2.3 CDS 74210242 74210370 74210242 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
chr2.3 exon 74210543 74211496 74210543 ID=MS.gene047086.t1.exon5;Parent=MS.gene047086.t1
chr2.3 CDS 74210543 74211496 74210543 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
chr2.3 exon 74211770 74211900 74211770 ID=MS.gene047086.t1.exon6;Parent=MS.gene047086.t1
chr2.3 CDS 74211770 74211900 74211770 ID=cds.MS.gene047086.t1;Parent=MS.gene047086.t1
Gene Sequence

>MS.gene047086

ATGCCATATGATCCTAGCCTAATGATGGTCTCCAACAAGTTCAAGATGTTAAAATTTTTGGCACTCTCTATACTATATGTTCTTCTGATTCATACTGCAAATGGGAAAGTTCACCATCACAAGTTTGTGGTATGTGCTTCTTAATTTCTCTATCACTAACTTATGATGGTGGTAATGCACAATTGATTTGTAAATAAACTATTTGTGCTTTCTGCAGGTAAAATCTTCATCTTTCACAAGACTATGTAATACCAAGAACATCTTGACGGTAAATGGGCAATTTCCTGGTCCAACATTGAAAGCTCATAGAGGAGATACACTTATAGTCAAGGTCTATAACCAGGCAAATTATAACATAACAATACATTGGTATGTGGCTTACCAAACCATATAATTTGTACATTTTTTTTTATTACTTTAGTTTAAACATTTATCTAGTAATTTGACATGTACCAAAGTTATTTGTTTTCAAAAATAAAAATTTGGGTTCAACTTGGATATTGGCTAGTGCATTTGTATTCTTTGGGCATAATTTGGGAGAGCTACTTTTACCCCCCATTAATTTCTTTAAAATTACACCCTACCGGGGTTTGTCAATTTGGACGGAAAAGAACGTTATTTTTCTCGCACATGAATGAATAAATGCAAATACAAATATTTGTTTTCATTTGAATGAGAGTAATTTCTCGCATACGAAGAAAATAGAACACTATTTTTCTCACATACAAATGAAAAAATGCAGTTAAAATGATTTACAGTAATATTCATTGATGTGTGCGATACCGTCTTAGTTTTTTTTTTTTGTAGTGGTCGGGGTTGAACCCTGGACCTTGCATATATACTGTGTAATGAGCATGACAGATTATCAGTTTTTTAAACTCTTAAAAAATATGGCAACACATAATTGTTTAAAAGATATTTTTACAGTATAAAATTAAATTCTAATATAATCTAATCATTTTTTTTTATTTACAAAATCAATATTTGCTGTTTCTTGTGCATAAAATATTCATTCCTTTAGGAAAGAGTAAGTCGGGTGGTGTGAGAGTGAGAGTAAACTGTAAAAATTTGGTGGAAATGCATTAGATTCATTTGAAGGGATTGACTTTCTTTCTTATAGTCATTATCATTATTCTTATGAGCCAGATTTGGAACTTGTTATTTTCACTAATAAATTGGATGAAGACGAGATGAAGATGAGATTGACATTGTACATGTTAAAGTGTAATATGCATATTAACACTTAGAGTAATTATTTAGGTATCAGTATAACCTAATGTTTAAGACGTGATTTAATCCCTTCTAATGTCCCAACATTTTGTTAGTCTGAGTTAAATTGGATTCGTACATCTTTAGTAAAGTCTAGGATTTTAATTTTGTAGAAATAAAAAACGTGATTAGGAAGAGAGACTCCACTAAAAGTAACCAATTAAGTTCTCTGATAAAAAATAGTCATCGGCAAAGCCGAGGAATACTTCACACACTGTATGTTATGAGTGTTTTTATCTTTAATGTATTTGGTTAAATAAAATATCTTTGTGTTATGAGTGTTTTTTATTATGTAATTTAGTTATATCAATGGTGTACATGTTTCTATGTATCGTGGTCTAGTATATGATTGATTAGAAGTGTTTGGTTGCAGGCATGGGGCAAGACAAGTGAGGAATCCATGGTCAGATGGACCTGAATACATAACACAGTGCCCAATTAAACCAGGAAACATGTTCAAACAAATTGTACATTTGACCACAGAAGAAGGAACAATATGGTGGCATGCACATAATGGTTGGGCAAGAGCTACAGTTCATGGAGCTGTCATCATTTATCCCAAACCTGGACACACTTATCCCTTTCCTAGACCTCATGCTGAGGTTCCAATTATACTAGGTACTCACTCCTTACCCTTTTTATATGGCTGAATACATCTTTAATCCTTTTATTCTGTCTCATTTACGATTTTGGTCCTCAATTTTGACTTTCTACGATAAAATACTTATGTAGCAACTCATTTGATGACGTGACATTGTCTTCGAGGATTCTCACCTAATAACTCATTTTTATGCCATTATAAGTACCTTTATATCACATCATAAAAAATCAACCCTAAATGCATAGATGGGAAAAATGTTGGACATTTTGAAAATTAAGGACCAAAATCTAAAATAAGACAAAATATTGGGATCAAAATTGTATTTAATTGACATTTTCATCATTGTGTAGGAGAGTGGTGGAAAGAACAAGTAATGGAAATTCCAAATGTAGCAAACAAAACTGGAGGAGAACCAATTCTATCAAATGCATATACCATCAATGGTCAACCTGGTTATCTATATCCCTGCTCCAAAAAAGGTCCACTCCCCTCCTACACTATCAAATCATATTTTAACGAATCAAAGAGAGTGTGTTAAAGGATGTGCCTTTAACATTCCTCTTGTCGGTATATATGATTATTAAACTCTACATATGTTATGTATCAAAAAATTCTTCCCTAAACATTAGTTTTTCCTTGTGATGTTTATAGATACTTTCAAGATGATTGTGGACTATGGAAAAACATATCTTCTTAGAATAATCAATGCAGTAATGGATGAAGAACTTTTCTTTGCCATTAAAAATCACAAATTGACAGTAGTTGGTAAAGATGGATTATACTTAAAACCAATAAAAACAGATTACATAATGATCACACCTGGTCAATCTATGGACATTCTAATGGAAGCAAATCAACCTCTTGGTCATTATTTCATGGCTGCAAGATCATACTCTAGTGCTTTTGGTGCTGGTTTTGACAACACAACCACAACAGCTTTACTTATATATAGTCATTCTCATCACCATCATCACAAAAAAAAGCCAATTCTTCCTCGACTTCCTCCTTACAACAAAACAGAAGCATCAACTAGCTTTACAAAGAAATTCAGAAGCCTTGCTACAAAAACTCATCCAATAAATGTTCCTACAAAAGTTGACACACATTTGTTGTTCACAATTTCTGTTAATTTGCTCAACTGTACTCAAGATAAACCCTGCACCGGTCCGTTCGGCAAAAGGTTTGCAGCTAGTGTGAACAACATTAGTCTTGTGCATCCATATATTGATTTTCTAAGTGCCTATTACTATAAAATCCCTGGTGTATTTGATATGGATTTTCCAAGAATTCCAACAAGGGAATTCAATTACACAGCTGATAAATTACCCGAATATTTTTTGAGTACATCATTTGGCACAAAGGTGTTGGTTTTGGACTATGATGCAAGTGTTGAGCTTGTACTGCAAGGGACTAATGTGTTAGCAAGTGATAATCATCCTGTTCATTTGCATGGATATAGTTTCTATGTGGTTGGTTGGGGTTTTGGGAATTTTGATCCTAAAAAAGATCCCAAAAACTATAATCTTATTGATCCACCAGAAGAAACTACAGTTGGAGTACCAAATAATGGTTGGGTTGCAATCAGATTCAGGGCTAATAATCCAGGTGAACTTTTTCAAAATTTATTCATATTGAAATTGATCGTAGAATATATGATTTTAGTCTCTCAACGTAAGTAATTTTAGTATAAGTAAATTTTACAAGAGCTAAAATAAAACACCAAAGACCAAAAGGTGATATATTTGCAAAGCCTAAAAATAAAAATGATATACTTGCTATGACTAAAAACAATTTAAACCAATTTTTTTTTTAAGAAACCAAATTAAAATTATAACACTGTATTTGATTTGTATCTTAATATTTGATTATTATGATCAGGTATGTGGTTGCTGCATTGTCACATAGAACGACATGCTACTTGGGGAATGAGTATGGTGTTTCTAGTGAAAGATGGCCCTAATGCTCAAACACAAATGCTTCCGCCCCCTGTGGATTTACCCAAATGTTAA
Protein sequence

>MS.gene047086.t1

MPYDPSLMMVSNKFKMLKFLALSILYVLLIHTANGKVHHHKFVVKSSSFTRLCNTKNILTVNGQFPGPTLKAHRGDTLIVKVYNQANYNITIHWHGARQVRNPWSDGPEYITQCPIKPGNMFKQIVHLTTEEGTIWWHAHNGWARATVHGAVIIYPKPGHTYPFPRPHAEVPIILGEWWKEQVMEIPNVANKTGGEPILSNAYTINGQPGYLYPCSKKDTFKMIVDYGKTYLLRIINAVMDEELFFAIKNHKLTVVGKDGLYLKPIKTDYIMITPGQSMDILMEANQPLGHYFMAARSYSSAFGAGFDNTTTTALLIYSHSHHHHHKKKPILPRLPPYNKTEASTSFTKKFRSLATKTHPINVPTKVDTHLLFTISVNLLNCTQDKPCTGPFGKRFAASVNNISLVHPYIDFLSAYYYKIPGVFDMDFPRIPTREFNYTADKLPEYFLSTSFGTKVLVLDYDASVELVLQGTNVLASDNHPVHLHGYSFYVVGWGFGNFDPKKDPKNYNLIDPPEETTVGVPNNGWVAIRFRANNPGMWLLHCHIERHATWGMSMVFLVKDGPNAQTQMLPPPVDLPKC