Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35871.t1 | XP_003615861.1 | 97.5 | 560 | 13 | 1 | 1 | 559 | 1 | 560 | 0.00E+00 | 1148.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35871.t1 | Q56YT0 | 70.3 | 563 | 158 | 2 | 5 | 559 | 9 | 570 | 2.1e-246 | 852.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35871.t1 | G7JZP3 | 97.5 | 560 | 13 | 1 | 1 | 559 | 1 | 560 | 0.0e+00 | 1148.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene35871 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene35871 | 0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene35871 | 0.815101 | 1.10E-51 | -1.69E-46 |
| MS.gene050338 | MS.gene35871 | 0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene050809 | MS.gene35871 | 0.847152 | 1.39E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene35871 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene35871 | 0.805038 | 1.62E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene35871 | 0.801741 | 7.80E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene35871 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene051863 | MS.gene35871 | 0.800747 | 1.25E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene35871 | 0.817475 | 3.23E-52 | -1.69E-46 |
| MS.gene052702 | MS.gene35871 | 0.85818 | 9.83E-63 | -1.69E-46 |
| MS.gene054181 | MS.gene35871 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene054290 | MS.gene35871 | 0.811444 | 6.98E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene35871 | 0.819273 | 1.27E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene35871 | 0.835591 | 1.54E-56 | -1.69E-46 |
| MS.gene055959 | MS.gene35871 | 0.806798 | 6.91E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene35871 | 0.822281 | 2.58E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene35871 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene056688 | MS.gene35871 | 0.836446 | 9.31E-57 | -1.69E-46 |
| MS.gene056697 | MS.gene35871 | 0.847933 | 8.45E-60 | -1.69E-46 |
| MS.gene056748 | MS.gene35871 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene35871 | 0.84353 | 1.32E-58 | -1.69E-46 |
| MS.gene056920 | MS.gene35871 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene056922 | MS.gene35871 | 0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene35871 | 0.812707 | 3.70E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene35871 | 0.847906 | 8.59E-60 | -1.69E-46 |
| MS.gene057549 | MS.gene35871 | 0.809743 | 1.63E-50 | -1.69E-46 |
| MS.gene057717 | MS.gene35871 | 0.840469 | 8.53E-58 | -1.69E-46 |
| MS.gene057768 | MS.gene35871 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene35871 | 0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene058068 | MS.gene35871 | 0.820986 | 5.13E-53 | -1.69E-46 |
| MS.gene058093 | MS.gene35871 | 0.810392 | 1.18E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene35871 | 0.816018 | 6.86E-52 | -1.69E-46 |
| MS.gene058158 | MS.gene35871 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene059069 | MS.gene35871 | 0.805949 | 1.04E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene35871 | 0.831892 | 1.29E-55 | -1.69E-46 |
| MS.gene059315 | MS.gene35871 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene35871 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene35871 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene35871 | 0.823659 | 1.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35871 | MS.gene068376 | PPI |
| MS.gene84742 | MS.gene35871 | PPI |
| MS.gene060530 | MS.gene35871 | PPI |
| MS.gene35871 | MS.gene067288 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35871.t1 | MTR_5g073210 | 97.500 | 560 | 13 | 1 | 1 | 559 | 1 | 560 | 0.0 | 1126 |
| MS.gene35871.t1 | MTR_5g083360 | 60.494 | 567 | 216 | 3 | 1 | 559 | 1 | 567 | 0.0 | 738 |
| MS.gene35871.t1 | MTR_3g071890 | 58.427 | 534 | 214 | 4 | 3 | 534 | 12 | 539 | 0.0 | 660 |
| MS.gene35871.t1 | MTR_5g020620 | 52.847 | 562 | 251 | 6 | 3 | 559 | 9 | 561 | 0.0 | 602 |
| MS.gene35871.t1 | MTR_5g020600 | 52.035 | 565 | 252 | 7 | 3 | 559 | 13 | 566 | 0.0 | 583 |
| MS.gene35871.t1 | MTR_2g008330 | 48.592 | 568 | 279 | 7 | 2 | 559 | 15 | 579 | 0.0 | 582 |
| MS.gene35871.t1 | MTR_7g060460 | 51.687 | 563 | 246 | 8 | 16 | 559 | 26 | 581 | 0.0 | 572 |
| MS.gene35871.t1 | MTR_7g062310 | 51.273 | 550 | 249 | 6 | 25 | 559 | 48 | 593 | 0.0 | 567 |
| MS.gene35871.t1 | MTR_7g062250 | 52.021 | 569 | 252 | 10 | 7 | 559 | 15 | 578 | 0.0 | 566 |
| MS.gene35871.t1 | MTR_7g458880 | 50.259 | 579 | 259 | 10 | 1 | 559 | 11 | 580 | 0.0 | 563 |
| MS.gene35871.t1 | MTR_5g069680 | 49.470 | 566 | 266 | 8 | 4 | 559 | 3 | 558 | 0.0 | 563 |
| MS.gene35871.t1 | MTR_4g015120 | 50.179 | 558 | 264 | 6 | 8 | 559 | 8 | 557 | 0.0 | 561 |
| MS.gene35871.t1 | MTR_7g058690 | 50.347 | 576 | 257 | 10 | 4 | 559 | 14 | 580 | 0.0 | 561 |
| MS.gene35871.t1 | MTR_3g462760 | 51.095 | 548 | 252 | 7 | 17 | 559 | 20 | 556 | 0.0 | 551 |
| MS.gene35871.t1 | MTR_3g101635 | 49.814 | 538 | 262 | 5 | 11 | 542 | 14 | 549 | 0.0 | 548 |
| MS.gene35871.t1 | MTR_3g101640 | 49.725 | 545 | 265 | 6 | 22 | 559 | 29 | 571 | 0.0 | 546 |
| MS.gene35871.t1 | MTR_4g064530 | 50.536 | 560 | 256 | 12 | 1 | 547 | 22 | 573 | 0.0 | 535 |
| MS.gene35871.t1 | MTR_7g065970 | 49.648 | 568 | 270 | 8 | 4 | 559 | 7 | 570 | 0.0 | 531 |
| MS.gene35871.t1 | MTR_7g065980 | 45.754 | 577 | 289 | 10 | 1 | 559 | 1 | 571 | 0.0 | 531 |
| MS.gene35871.t1 | MTR_5g081810 | 49.074 | 540 | 256 | 10 | 26 | 559 | 3 | 529 | 0.0 | 530 |
| MS.gene35871.t1 | MTR_4g019225 | 48.446 | 547 | 267 | 6 | 26 | 559 | 28 | 572 | 0.0 | 527 |
| MS.gene35871.t1 | MTR_8g027375 | 44.144 | 555 | 299 | 7 | 12 | 559 | 21 | 571 | 3.96e-175 | 507 |
| MS.gene35871.t1 | MTR_4g064530 | 49.908 | 543 | 250 | 13 | 1 | 530 | 22 | 555 | 4.15e-173 | 501 |
| MS.gene35871.t1 | MTR_8g091390 | 31.338 | 568 | 330 | 18 | 16 | 550 | 24 | 564 | 2.18e-68 | 231 |
| MS.gene35871.t1 | MTR_3g078700 | 31.373 | 561 | 301 | 21 | 4 | 534 | 9 | 515 | 9.30e-66 | 223 |
| MS.gene35871.t1 | MTR_5g081790 | 44.203 | 276 | 136 | 9 | 248 | 517 | 157 | 420 | 1.86e-63 | 214 |
| MS.gene35871.t1 | MTR_5g081790 | 46.405 | 153 | 75 | 1 | 18 | 163 | 18 | 170 | 7.99e-43 | 159 |
| MS.gene35871.t1 | MTR_3g078740 | 30.268 | 598 | 336 | 22 | 4 | 549 | 9 | 577 | 1.57e-62 | 216 |
| MS.gene35871.t1 | MTR_3g078730 | 29.840 | 563 | 334 | 19 | 4 | 549 | 9 | 527 | 5.77e-57 | 200 |
| MS.gene35871.t1 | MTR_3g008580 | 27.617 | 554 | 356 | 16 | 5 | 541 | 8 | 533 | 1.80e-46 | 172 |
| MS.gene35871.t1 | MTR_4g101650 | 26.761 | 568 | 380 | 15 | 4 | 559 | 6 | 549 | 7.72e-45 | 167 |
| MS.gene35871.t1 | MTR_1g090707 | 28.281 | 541 | 327 | 19 | 38 | 559 | 38 | 536 | 8.71e-45 | 167 |
| MS.gene35871.t1 | MTR_4g075690 | 28.272 | 573 | 340 | 21 | 8 | 559 | 10 | 532 | 4.61e-44 | 164 |
| MS.gene35871.t1 | MTR_3g083400 | 26.381 | 561 | 341 | 16 | 4 | 541 | 6 | 517 | 2.71e-43 | 162 |
| MS.gene35871.t1 | MTR_4g049390 | 28.120 | 569 | 349 | 18 | 6 | 559 | 7 | 530 | 3.47e-43 | 162 |
| MS.gene35871.t1 | MTR_3g083430 | 27.289 | 557 | 341 | 19 | 4 | 541 | 6 | 517 | 3.54e-43 | 162 |
| MS.gene35871.t1 | MTR_3g083390 | 27.289 | 557 | 341 | 19 | 4 | 541 | 6 | 517 | 6.03e-43 | 161 |
| MS.gene35871.t1 | MTR_3g083440 | 27.289 | 557 | 341 | 19 | 4 | 541 | 6 | 517 | 6.66e-43 | 161 |
| MS.gene35871.t1 | MTR_3g115050 | 28.049 | 574 | 353 | 20 | 1 | 559 | 5 | 533 | 4.92e-42 | 159 |
| MS.gene35871.t1 | MTR_4g083190 | 27.768 | 551 | 321 | 19 | 2 | 525 | 3 | 503 | 6.57e-42 | 159 |
| MS.gene35871.t1 | MTR_3g083450 | 27.205 | 533 | 331 | 18 | 25 | 541 | 27 | 518 | 7.25e-42 | 158 |
| MS.gene35871.t1 | MTR_4g048350 | 29.412 | 527 | 315 | 19 | 45 | 559 | 48 | 529 | 4.60e-41 | 156 |
| MS.gene35871.t1 | MTR_4g083210 | 26.345 | 539 | 329 | 19 | 8 | 525 | 6 | 497 | 4.69e-41 | 156 |
| MS.gene35871.t1 | MTR_5g018270 | 27.063 | 521 | 322 | 19 | 17 | 525 | 22 | 496 | 1.05e-39 | 152 |
| MS.gene35871.t1 | MTR_3g083410 | 26.667 | 525 | 314 | 15 | 40 | 541 | 5 | 481 | 1.44e-39 | 151 |
| MS.gene35871.t1 | MTR_1g026410 | 26.353 | 573 | 358 | 15 | 4 | 559 | 7 | 532 | 1.48e-39 | 152 |
| MS.gene35871.t1 | MTR_8g479380 | 27.135 | 527 | 336 | 16 | 8 | 525 | 10 | 497 | 2.04e-39 | 151 |
| MS.gene35871.t1 | MTR_2g088080 | 29.268 | 533 | 320 | 18 | 39 | 559 | 46 | 533 | 2.58e-38 | 148 |
| MS.gene35871.t1 | MTR_8g479390 | 26.419 | 511 | 333 | 16 | 21 | 525 | 26 | 499 | 3.44e-38 | 148 |
| MS.gene35871.t1 | MTR_8g073840 | 40.000 | 200 | 80 | 4 | 17 | 214 | 23 | 184 | 2.25e-37 | 140 |
| MS.gene35871.t1 | MTR_4g075690 | 29.158 | 487 | 275 | 21 | 8 | 473 | 10 | 447 | 5.96e-36 | 140 |
| MS.gene35871.t1 | MTR_7g051440 | 27.734 | 512 | 331 | 18 | 25 | 524 | 30 | 514 | 6.48e-36 | 142 |
| MS.gene35871.t1 | MTR_4g132320 | 27.562 | 566 | 354 | 20 | 7 | 559 | 12 | 534 | 4.12e-32 | 130 |
| MS.gene35871.t1 | MTR_2g088080 | 28.807 | 486 | 300 | 17 | 81 | 559 | 6 | 452 | 3.21e-29 | 120 |
| MS.gene35871.t1 | MTR_7g058670 | 59.259 | 81 | 32 | 1 | 81 | 160 | 13 | 93 | 3.17e-27 | 105 |
| MS.gene35871.t1 | MTR_3g079660 | 37.363 | 91 | 52 | 2 | 469 | 559 | 5 | 90 | 9.95e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35871.t1 | AT2G30210 | 70.337 | 563 | 158 | 2 | 5 | 559 | 9 | 570 | 0.0 | 832 |
| MS.gene35871.t1 | AT5G07130 | 65.439 | 570 | 185 | 5 | 1 | 559 | 1 | 569 | 0.0 | 765 |
| MS.gene35871.t1 | AT5G05390 | 60.606 | 561 | 214 | 5 | 3 | 559 | 8 | 565 | 0.0 | 720 |
| MS.gene35871.t1 | AT2G40370 | 58.333 | 576 | 222 | 4 | 2 | 559 | 5 | 580 | 0.0 | 714 |
| MS.gene35871.t1 | AT5G07130 | 68.041 | 485 | 143 | 5 | 86 | 559 | 1 | 484 | 0.0 | 669 |
| MS.gene35871.t1 | AT5G07130 | 68.041 | 485 | 143 | 5 | 86 | 559 | 1 | 484 | 0.0 | 669 |
| MS.gene35871.t1 | AT2G29130 | 52.705 | 573 | 250 | 9 | 4 | 559 | 5 | 573 | 0.0 | 582 |
| MS.gene35871.t1 | AT5G09360 | 49.378 | 563 | 273 | 7 | 1 | 559 | 15 | 569 | 0.0 | 575 |
| MS.gene35871.t1 | AT5G03260 | 51.337 | 561 | 257 | 7 | 4 | 559 | 8 | 557 | 0.0 | 570 |
| MS.gene35871.t1 | AT5G60020 | 51.964 | 560 | 236 | 10 | 25 | 559 | 26 | 577 | 0.0 | 568 |
| MS.gene35871.t1 | AT5G60020 | 52.727 | 550 | 227 | 10 | 35 | 559 | 4 | 545 | 0.0 | 565 |
| MS.gene35871.t1 | AT2G38080 | 50.088 | 567 | 266 | 8 | 1 | 559 | 1 | 558 | 0.0 | 558 |
| MS.gene35871.t1 | AT5G58910 | 49.470 | 566 | 267 | 6 | 4 | 559 | 11 | 567 | 0.0 | 549 |
| MS.gene35871.t1 | AT5G58910 | 49.470 | 566 | 266 | 7 | 4 | 559 | 11 | 566 | 0.0 | 548 |
| MS.gene35871.t1 | AT5G01190 | 50.000 | 560 | 267 | 6 | 5 | 559 | 7 | 558 | 0.0 | 540 |
| MS.gene35871.t1 | AT2G46570 | 46.263 | 562 | 291 | 7 | 5 | 559 | 12 | 569 | 0.0 | 530 |
| MS.gene35871.t1 | AT5G58910 | 50.281 | 533 | 240 | 6 | 37 | 559 | 6 | 523 | 0.0 | 528 |
| MS.gene35871.t1 | AT5G01190 | 51.527 | 524 | 242 | 5 | 41 | 559 | 28 | 544 | 0.0 | 525 |
| MS.gene35871.t1 | AT3G09220 | 49.457 | 552 | 257 | 9 | 4 | 542 | 8 | 550 | 0.0 | 522 |
| MS.gene35871.t1 | AT1G18140 | 47.788 | 565 | 267 | 9 | 17 | 559 | 23 | 581 | 1.71e-179 | 518 |
| MS.gene35871.t1 | AT5G60020 | 51.931 | 518 | 216 | 10 | 25 | 517 | 26 | 535 | 3.04e-178 | 514 |
| MS.gene35871.t1 | AT5G01040 | 45.714 | 560 | 285 | 7 | 11 | 559 | 15 | 566 | 2.71e-173 | 503 |
| MS.gene35871.t1 | AT5G01050 | 45.018 | 562 | 288 | 7 | 11 | 559 | 15 | 568 | 3.44e-168 | 490 |
| MS.gene35871.t1 | AT5G48100 | 45.336 | 536 | 279 | 9 | 24 | 549 | 22 | 553 | 3.99e-168 | 489 |
| MS.gene35871.t1 | AT2G46570 | 46.392 | 485 | 250 | 6 | 81 | 559 | 4 | 484 | 6.77e-158 | 460 |
| MS.gene35871.t1 | AT3G09220 | 49.673 | 459 | 211 | 8 | 97 | 542 | 2 | 453 | 9.36e-149 | 436 |
| MS.gene35871.t1 | AT5G21100 | 31.332 | 533 | 304 | 17 | 39 | 538 | 39 | 542 | 3.96e-69 | 233 |
| MS.gene35871.t1 | AT4G39830 | 31.351 | 555 | 302 | 21 | 39 | 549 | 51 | 570 | 3.39e-68 | 231 |
| MS.gene35871.t1 | AT5G21105 | 30.823 | 571 | 323 | 22 | 5 | 537 | 22 | 558 | 8.82e-65 | 222 |
| MS.gene35871.t1 | AT5G21105 | 30.309 | 551 | 312 | 22 | 5 | 517 | 22 | 538 | 2.57e-55 | 195 |
| MS.gene35871.t1 | AT4G39830 | 30.315 | 508 | 276 | 20 | 85 | 549 | 1 | 473 | 9.97e-51 | 182 |
| MS.gene35871.t1 | AT4G39830 | 30.357 | 504 | 273 | 20 | 89 | 549 | 7 | 475 | 4.87e-50 | 180 |
| MS.gene35871.t1 | AT1G75790 | 28.224 | 535 | 328 | 16 | 1 | 519 | 1 | 495 | 1.50e-49 | 180 |
| MS.gene35871.t1 | AT4G25240 | 29.247 | 571 | 357 | 18 | 4 | 559 | 12 | 550 | 6.64e-48 | 176 |
| MS.gene35871.t1 | AT4G25240 | 29.247 | 571 | 357 | 18 | 4 | 559 | 12 | 550 | 6.64e-48 | 176 |
| MS.gene35871.t1 | AT4G39830 | 29.622 | 503 | 265 | 19 | 89 | 549 | 7 | 462 | 2.64e-46 | 169 |
| MS.gene35871.t1 | AT4G12420 | 27.664 | 535 | 351 | 14 | 5 | 527 | 6 | 516 | 3.02e-46 | 171 |
| MS.gene35871.t1 | AT4G12420 | 27.664 | 535 | 351 | 14 | 5 | 527 | 6 | 516 | 3.02e-46 | 171 |
| MS.gene35871.t1 | AT5G66920 | 27.748 | 555 | 327 | 17 | 25 | 559 | 38 | 538 | 5.57e-45 | 167 |
| MS.gene35871.t1 | AT1G21850 | 28.676 | 544 | 303 | 18 | 8 | 525 | 12 | 496 | 9.09e-44 | 164 |
| MS.gene35871.t1 | AT5G51480 | 26.916 | 561 | 369 | 17 | 14 | 559 | 16 | 550 | 2.81e-43 | 163 |
| MS.gene35871.t1 | AT5G48450 | 27.013 | 559 | 355 | 19 | 8 | 556 | 13 | 528 | 4.65e-43 | 162 |
| MS.gene35871.t1 | AT5G48450 | 27.128 | 564 | 348 | 20 | 8 | 556 | 13 | 528 | 8.43e-43 | 162 |
| MS.gene35871.t1 | AT1G21860 | 27.083 | 528 | 333 | 16 | 8 | 525 | 11 | 496 | 2.55e-41 | 157 |
| MS.gene35871.t1 | AT4G22010 | 27.207 | 555 | 363 | 15 | 11 | 559 | 11 | 530 | 5.73e-41 | 155 |
| MS.gene35871.t1 | AT1G76160 | 27.419 | 558 | 360 | 17 | 8 | 559 | 12 | 530 | 2.94e-40 | 154 |
| MS.gene35871.t1 | AT1G41830 | 26.018 | 565 | 367 | 16 | 3 | 559 | 10 | 531 | 3.85e-39 | 150 |
| MS.gene35871.t1 | AT4G28090 | 25.788 | 539 | 332 | 15 | 6 | 524 | 9 | 499 | 1.10e-38 | 149 |
| MS.gene35871.t1 | AT1G55570 | 25.967 | 543 | 326 | 16 | 4 | 519 | 7 | 500 | 5.71e-37 | 144 |
| MS.gene35871.t1 | AT2G23630 | 29.412 | 527 | 321 | 19 | 42 | 559 | 53 | 537 | 6.62e-36 | 141 |
| MS.gene35871.t1 | AT2G23630 | 29.412 | 527 | 321 | 19 | 42 | 559 | 48 | 532 | 7.17e-36 | 141 |
| MS.gene35871.t1 | AT4G38420 | 26.208 | 538 | 336 | 18 | 6 | 524 | 9 | 504 | 3.65e-35 | 139 |
| MS.gene35871.t1 | AT4G37160 | 27.402 | 562 | 367 | 17 | 2 | 559 | 10 | 534 | 1.28e-33 | 135 |
| MS.gene35871.t1 | AT5G21105 | 30.205 | 341 | 202 | 11 | 209 | 537 | 51 | 367 | 5.55e-33 | 130 |
| MS.gene35871.t1 | AT3G13390 | 25.479 | 522 | 311 | 17 | 25 | 519 | 29 | 499 | 2.30e-32 | 131 |
| MS.gene35871.t1 | AT1G55560 | 25.281 | 534 | 339 | 19 | 4 | 519 | 5 | 496 | 1.18e-31 | 129 |
| MS.gene35871.t1 | AT3G13400 | 25.607 | 535 | 336 | 20 | 4 | 519 | 6 | 497 | 8.58e-31 | 126 |
| MS.gene35871.t1 | AT3G13400 | 25.607 | 535 | 336 | 20 | 4 | 519 | 6 | 497 | 8.58e-31 | 126 |
| MS.gene35871.t1 | AT4G38420 | 25.977 | 512 | 318 | 18 | 6 | 498 | 9 | 478 | 3.49e-30 | 124 |
| MS.gene35871.t1 | AT4G38420 | 31.408 | 277 | 177 | 7 | 6 | 278 | 9 | 276 | 1.13e-29 | 122 |
| MS.gene35871.t1 | AT4G37160 | 28.990 | 307 | 197 | 6 | 2 | 305 | 10 | 298 | 1.42e-25 | 110 |
Find 146 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCGAAACACTTTAATTT+TGG | 0.112254 | 5.1:+56418815 | None:intergenic |
| TTTCATTATTTATCCGAAAA+TGG | 0.151993 | 5.1:-56420010 | MS.gene35871:CDS |
| CCTTGACACCTTGGACTATT+AGG | 0.188458 | 5.1:+56418738 | None:intergenic |
| TTTATAGTTGGTTCAGGTTT+TGG | 0.199584 | 5.1:-56418417 | MS.gene35871:CDS |
| GCCACCATAGTGTTCCTTCT+TGG | 0.231177 | 5.1:+56420073 | None:intergenic |
| CGAAGGATACTCACCGTAAA+TGG | 0.256488 | 5.1:-56421045 | MS.gene35871:CDS |
| GTCTTGAAGGTGGTCTATTT+TGG | 0.257321 | 5.1:+56418913 | None:intergenic |
| ATTGTTGTGAATCAGGAATT+TGG | 0.267922 | 5.1:-56417997 | MS.gene35871:intron |
| AGAGAATTTCCCATTCTTCT+TGG | 0.298450 | 5.1:-56419958 | MS.gene35871:intron |
| AAGTTGTTCAAGTTGAAATA+TGG | 0.300472 | 5.1:-56418522 | MS.gene35871:CDS |
| TTTCTAAGAGCCACTGTCTA+TGG | 0.305951 | 5.1:-56420036 | MS.gene35871:CDS |
| TTAATGCAAGCTTACTATAA+TGG | 0.307661 | 5.1:-56418648 | MS.gene35871:CDS |
| AATGGTAAAGCCGGCAAAAT+AGG | 0.318344 | 5.1:+56418891 | None:intergenic |
| CATTTCTTTATAGTTGGTTC+AGG | 0.332092 | 5.1:-56418423 | MS.gene35871:CDS |
| AACGTAGCAGGATCAGTTCT+TGG | 0.335909 | 5.1:+56418384 | None:intergenic |
| ACATAGATTCACATCTCAAT+TGG | 0.345519 | 5.1:-56417961 | MS.gene35871:CDS |
| GCCAGGAAACTGTCCATTTA+CGG | 0.347312 | 5.1:+56421032 | None:intergenic |
| CCGTCCCTCGCTTCGATCGT+TGG | 0.351478 | 5.1:+56421009 | None:intergenic |
| ATTATAGTAAGCTTGCATTA+AGG | 0.353120 | 5.1:+56418650 | None:intergenic |
| GGGTTTGGCAACAGCACTTT+TGG | 0.375326 | 5.1:-56417939 | MS.gene35871:CDS |
| TTCACATCTCAATTGGGGTT+TGG | 0.376065 | 5.1:-56417954 | MS.gene35871:CDS |
| GGGTTCCATTTCTTTATAGT+TGG | 0.378042 | 5.1:-56418429 | MS.gene35871:CDS |
| CATAGATTCACATCTCAATT+GGG | 0.380545 | 5.1:-56417960 | MS.gene35871:CDS |
| CCATTTGGTCCTTGACACCT+TGG | 0.385637 | 5.1:+56418729 | None:intergenic |
| GCTGCAAATCTTGTTCCATT+TGG | 0.386553 | 5.1:+56418714 | None:intergenic |
| TGCATTAAGGAAGTTGTTCT+AGG | 0.389050 | 5.1:+56418663 | None:intergenic |
| ATGCATTATACCTGGATTAT+CGG | 0.389442 | 5.1:+56418287 | None:intergenic |
| GCTTACTATAATGGTGTTCC+TGG | 0.390895 | 5.1:-56418639 | MS.gene35871:CDS |
| ACCGTAAATGGACAGTTTCC+TGG | 0.396378 | 5.1:-56421033 | MS.gene35871:CDS |
| TTGAAGATTACCAAGAAGAA+TGG | 0.396806 | 5.1:+56419948 | None:intergenic |
| TTCATTATTTATCCGAAAAT+GGG | 0.397106 | 5.1:-56420009 | MS.gene35871:CDS |
| GTTGTCAAATGCAGCATTCA+TGG | 0.401840 | 5.1:+56418962 | None:intergenic |
| GAATGATTTCAAACCTTGGC+TGG | 0.402430 | 5.1:+56419441 | None:intergenic |
| ATGGGTCGCCATTCGTTTCA+AGG | 0.412325 | 5.1:-56418310 | MS.gene35871:CDS |
| CCACCTGTGAGGAATACTAT+TGG | 0.412353 | 5.1:-56418348 | MS.gene35871:CDS |
| ATCTCCTGGTTGACCGTTCA+TGG | 0.413530 | 5.1:+56419477 | None:intergenic |
| CGTCCCTCGCTTCGATCGTT+GGG | 0.413929 | 5.1:+56421010 | None:intergenic |
| TGTGCAACAGGCATGGGCTT+AGG | 0.415052 | 5.1:-56420191 | MS.gene35871:intron |
| GCATTCACATCAAGGATTAG+AGG | 0.421253 | 5.1:-56418843 | MS.gene35871:CDS |
| TTATTGTTCACTGTAGGGTT+AGG | 0.421636 | 5.1:-56418780 | MS.gene35871:CDS |
| CTGAACCAACTATAAAGAAA+TGG | 0.426203 | 5.1:+56418424 | None:intergenic |
| TAACTTCCTCCTGGTTGGAT+TGG | 0.434515 | 5.1:+56420120 | None:intergenic |
| ATGCAGCATTCATGGCGGTT+TGG | 0.436299 | 5.1:+56418970 | None:intergenic |
| GAGGTATCACTGACTGTAAT+GGG | 0.438774 | 5.1:+56417900 | None:intergenic |
| TTGAACTGTATAGGAGGAAC+AGG | 0.439285 | 5.1:+56418594 | None:intergenic |
| GATCACCCTATGCATGTTCA+TGG | 0.442341 | 5.1:-56418450 | MS.gene35871:CDS |
| GAAATGTTCCTAGGGGTTTG+TGG | 0.445135 | 5.1:-56418563 | MS.gene35871:CDS |
| CTATGGTGGCATGCTCATAC+TGG | 0.446683 | 5.1:-56420060 | MS.gene35871:CDS |
| TCTCTAGTTGGCTTAGAGAA+AGG | 0.447045 | 5.1:+56419976 | None:intergenic |
| CTCGCTTCGATCGTTGGGCC+AGG | 0.448652 | 5.1:+56421015 | None:intergenic |
| ATTACACAGGAAATGTTCCT+AGG | 0.452764 | 5.1:-56418572 | MS.gene35871:CDS |
| TGAAGATTACCAAGAAGAAT+GGG | 0.457331 | 5.1:+56419949 | None:intergenic |
| CGTTTCAAGGCCGATAATCC+AGG | 0.464778 | 5.1:-56418297 | MS.gene35871:intron |
| AGAATGGGAAATTCTCTAGT+TGG | 0.466112 | 5.1:+56419964 | None:intergenic |
| CCTGTGTAATTGAACTGTAT+AGG | 0.466472 | 5.1:+56418585 | None:intergenic |
| GTTTGTCTTAAGAGAGCCAT+TGG | 0.471023 | 5.1:+56419541 | None:intergenic |
| CCAAGGTGTCAAGGACCAAA+TGG | 0.477385 | 5.1:-56418729 | MS.gene35871:CDS |
| GCCGGCAAAATAGGTCTTGA+AGG | 0.477836 | 5.1:+56418900 | None:intergenic |
| GTTGGCTTAGAGAAAGGATA+AGG | 0.479975 | 5.1:+56419982 | None:intergenic |
| GTGTATGCAACAGATACATT+TGG | 0.482818 | 5.1:+56419499 | None:intergenic |
| GTGAGTTTATTGTTCACTGT+AGG | 0.484623 | 5.1:-56418786 | MS.gene35871:CDS |
| TCTTAAGAGAATTGTTTCTC+CGG | 0.491448 | 5.1:+56419187 | None:intergenic |
| TCGACAAGGTTGAACGTAGC+AGG | 0.491890 | 5.1:+56418372 | None:intergenic |
| GTGATCAAAGTAACAAATGC+TGG | 0.495378 | 5.1:-56420976 | MS.gene35871:CDS |
| TGAGTTTATTGTTCACTGTA+GGG | 0.502703 | 5.1:-56418785 | MS.gene35871:CDS |
| AACACTAGAGTCCTCATGAT+AGG | 0.504563 | 5.1:-56419068 | MS.gene35871:CDS |
| GGAGGTATCACTGACTGTAA+TGG | 0.504892 | 5.1:+56417899 | None:intergenic |
| TTGGAACACCTCCTGGTGGA+TGG | 0.505700 | 5.1:-56418329 | MS.gene35871:CDS |
| AATACTATTGGAACACCTCC+TGG | 0.507986 | 5.1:-56418336 | MS.gene35871:CDS |
| CTCTATAGATGTTCCAGCCA+AGG | 0.510832 | 5.1:-56419454 | MS.gene35871:intron |
| TTGAGAAATCCATGGGCTGA+TGG | 0.512347 | 5.1:-56420165 | MS.gene35871:CDS |
| TGGAACACCTCCTGGTGGAT+GGG | 0.516621 | 5.1:-56418328 | MS.gene35871:CDS |
| AAAACCAAGAAGGAACACTA+TGG | 0.519751 | 5.1:-56420077 | MS.gene35871:CDS |
| CAGTGGATGGAGATGTTGTA+AGG | 0.523772 | 5.1:+56420952 | None:intergenic |
| ATGTGTAACTTCCTCCTGGT+TGG | 0.527858 | 5.1:+56420115 | None:intergenic |
| GCCGCCATGTAGTATCGGCC+AGG | 0.532008 | 5.1:+56419002 | None:intergenic |
| CTGCAAAACAATCTGAACAT+TGG | 0.532115 | 5.1:+56418497 | None:intergenic |
| CTGCAACTGCATTCACATCA+AGG | 0.532127 | 5.1:-56418851 | MS.gene35871:CDS |
| GAACATCTATAGAGATCTCC+TGG | 0.536997 | 5.1:+56419463 | None:intergenic |
| TGAGGTAGATCTGGTGGTGG+AGG | 0.538755 | 5.1:+56417881 | None:intergenic |
| GGACATTGTGTCACATAACT+AGG | 0.539105 | 5.1:+56420141 | None:intergenic |
| TGGAACCCATGAACATGCAT+AGG | 0.539781 | 5.1:+56418444 | None:intergenic |
| ACCACCTGGCCGATACTACA+TGG | 0.540545 | 5.1:-56419006 | MS.gene35871:CDS |
| TAGCATTGAGGTAGATCTGG+TGG | 0.543913 | 5.1:+56417875 | None:intergenic |
| TTTACAATTCAAAACCAAGA+AGG | 0.543934 | 5.1:-56420087 | MS.gene35871:CDS |
| CGGTATGTGTAACTTCCTCC+TGG | 0.545222 | 5.1:+56420111 | None:intergenic |
| TGTTTCATTTGCTGCAGCAG+AGG | 0.548223 | 5.1:-56421212 | MS.gene35871:CDS |
| CGATGATAGTTACCAGTGGA+TGG | 0.549490 | 5.1:+56420939 | None:intergenic |
| TATCATGAGGACTCTAGTGT+TGG | 0.554372 | 5.1:+56419070 | None:intergenic |
| CGCGTGCCGCCATGTAGTAT+CGG | 0.555822 | 5.1:+56418997 | None:intergenic |
| CTAGGTGTCCACAAACCCCT+AGG | 0.555841 | 5.1:+56418555 | None:intergenic |
| TTACACAGGAAATGTTCCTA+GGG | 0.560206 | 5.1:-56418571 | MS.gene35871:CDS |
| CCTAATAGTCCAAGGTGTCA+AGG | 0.568344 | 5.1:-56418738 | MS.gene35871:CDS |
| GTCACAGCTGATCAACCACC+TGG | 0.575678 | 5.1:-56419020 | MS.gene35871:CDS |
| CGAATGGCGACCCATCCACC+AGG | 0.580203 | 5.1:+56418318 | None:intergenic |
| ATGGTTTGATAGAGATCCAA+TGG | 0.580804 | 5.1:-56419557 | MS.gene35871:CDS |
| GGTTTGTGGACACCTAGAAA+AGG | 0.582031 | 5.1:-56418549 | MS.gene35871:CDS |
| TACTAGTATAGTAACAATTG+AGG | 0.584246 | 5.1:-56418472 | MS.gene35871:CDS |
| TTAAGACAAACACAGTTCAC+AGG | 0.584771 | 5.1:-56419529 | MS.gene35871:CDS |
| TACACCATGAACGGTCAACC+AGG | 0.586391 | 5.1:-56419481 | MS.gene35871:CDS |
| ATGAGGACTCTAGTGTTGGA+AGG | 0.587715 | 5.1:+56419074 | None:intergenic |
| TATGCAACAGATACATTTGG+AGG | 0.588595 | 5.1:+56419502 | None:intergenic |
| GGCATAGACTTGAAAACGTA+CGG | 0.589109 | 5.1:+56419208 | None:intergenic |
| TTCAAACTGCAACAGTGAAG+AGG | 0.591115 | 5.1:-56421080 | MS.gene35871:CDS |
| ATCACCCTATGCATGTTCAT+GGG | 0.594471 | 5.1:-56418449 | MS.gene35871:CDS |
| ATAGATTCACATCTCAATTG+GGG | 0.596176 | 5.1:-56417959 | MS.gene35871:CDS |
| CCAACGATCGAAGCGAGGGA+CGG | 0.596308 | 5.1:-56421009 | MS.gene35871:CDS |
| TTAGGATGTTGAGAAATCCA+TGG | 0.598180 | 5.1:-56420173 | MS.gene35871:CDS |
| CAGAATGACTGTTGTTGCTA+CGG | 0.601727 | 5.1:-56419114 | MS.gene35871:CDS |
| TGGCCCAACGATCGAAGCGA+GGG | 0.604197 | 5.1:-56421013 | MS.gene35871:CDS |
| AGGACATTGATTGTTTGACC+TGG | 0.607085 | 5.1:+56419044 | None:intergenic |
| AAACACTTACAACAAACTGA+TGG | 0.608462 | 5.1:+56421182 | None:intergenic |
| CATTGAGGTAGATCTGGTGG+TGG | 0.610540 | 5.1:+56417878 | None:intergenic |
| GCACAAATCCTAATAGTCCA+AGG | 0.611114 | 5.1:-56418746 | MS.gene35871:CDS |
| TTTGACCTGGTCCTATCATG+AGG | 0.614547 | 5.1:+56419057 | None:intergenic |
| GTGTAATTGAACTGTATAGG+AGG | 0.616090 | 5.1:+56418588 | None:intergenic |
| CTGGCCCAACGATCGAAGCG+AGG | 0.616399 | 5.1:-56421014 | MS.gene35871:CDS |
| GGAACCCATGAACATGCATA+GGG | 0.618003 | 5.1:+56418445 | None:intergenic |
| CCTATACAGTTCAATTACAC+AGG | 0.618962 | 5.1:-56418585 | MS.gene35871:CDS |
| TAGGATGTTGAGAAATCCAT+GGG | 0.621362 | 5.1:-56420172 | MS.gene35871:CDS |
| ATTATCGGCCTTGAAACGAA+TGG | 0.624949 | 5.1:+56418302 | None:intergenic |
| CCAATAGTATTCCTCACAGG+TGG | 0.626541 | 5.1:+56418348 | None:intergenic |
| GTGGTTGATCAGCTGTGACA+AGG | 0.626930 | 5.1:+56419024 | None:intergenic |
| CTTACAACATCTCCATCCAC+TGG | 0.628162 | 5.1:-56420951 | MS.gene35871:intron |
| TCCTCACAGGTGGATCGACA+AGG | 0.628411 | 5.1:+56418358 | None:intergenic |
| AGAGTCCTCATGATAGGACC+AGG | 0.629037 | 5.1:-56419062 | MS.gene35871:CDS |
| GTTCCAATAGTATTCCTCAC+AGG | 0.630506 | 5.1:+56418345 | None:intergenic |
| AACTGTATAGGAGGAACAGG+AGG | 0.636960 | 5.1:+56418597 | None:intergenic |
| TAACTAGGTCCATCAGCCCA+TGG | 0.645673 | 5.1:+56420156 | None:intergenic |
| ACACAATGTCCAATCCAACC+AGG | 0.647093 | 5.1:-56420129 | MS.gene35871:CDS |
| TCTGTTGCATACACCATGAA+CGG | 0.651763 | 5.1:-56419490 | MS.gene35871:CDS |
| TACACAGGAAATGTTCCTAG+GGG | 0.663460 | 5.1:-56418570 | MS.gene35871:CDS |
| GCCATGTAGTATCGGCCAGG+TGG | 0.665400 | 5.1:+56419005 | None:intergenic |
| TGATGTGAATGCAGTTGCAG+TGG | 0.665699 | 5.1:+56418854 | None:intergenic |
| ACCAAGAAGGAACACTATGG+TGG | 0.666226 | 5.1:-56420074 | MS.gene35871:CDS |
| TAGCAACAACAGTCATTCTG+TGG | 0.668466 | 5.1:+56419117 | None:intergenic |
| AATGAAAGCTCCATAGACAG+TGG | 0.677360 | 5.1:+56420026 | None:intergenic |
| ACTATTGGAACACCTCCTGG+TGG | 0.679776 | 5.1:-56418333 | MS.gene35871:CDS |
| ACCTTGTCGATCCACCTGTG+AGG | 0.686020 | 5.1:-56418359 | MS.gene35871:CDS |
| GTCAAATGCAGCATTCATGG+CGG | 0.689483 | 5.1:+56418965 | None:intergenic |
| GGCAAAATAGGTCTTGAAGG+TGG | 0.702577 | 5.1:+56418903 | None:intergenic |
| ATGGCGACCCATCCACCAGG+AGG | 0.719284 | 5.1:+56418321 | None:intergenic |
| AGAGGCTGTGCAAAACACGA+AGG | 0.719687 | 5.1:-56421062 | MS.gene35871:CDS |
| AGGAACAGGAGGAAAATCTG+TGG | 0.731627 | 5.1:+56418608 | None:intergenic |
| CAATGTCCAATCCAACCAGG+AGG | 0.746956 | 5.1:-56420126 | MS.gene35871:CDS |
| ACCTGGCCGATACTACATGG+CGG | 0.772870 | 5.1:-56419003 | MS.gene35871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGAGTATTTTTTTTT+AGG | + | chr5.1:56419458-56419477 | None:intergenic | 10.0% |
| !!! | TTTTTGAGTATTTTTTTTTA+GGG | + | chr5.1:56419457-56419476 | None:intergenic | 10.0% |
| !! | AAATTATGATCTGCAAATAA+AGG | + | chr5.1:56419854-56419873 | None:intergenic | 20.0% |
| !! | TTCATTATTTATCCGAAAAT+GGG | - | chr5.1:56419121-56419140 | MS.gene35871:CDS | 20.0% |
| !! | TTTCATTATTTATCCGAAAA+TGG | - | chr5.1:56419120-56419139 | MS.gene35871:CDS | 20.0% |
| !!! | AGTATTTTTTTTTAGGGATT+TGG | + | chr5.1:56419451-56419470 | None:intergenic | 20.0% |
| !!! | ATACCTTTAGAATGAAAAAT+AGG | + | chr5.1:56419881-56419900 | None:intergenic | 20.0% |
| !!! | ATAGCTTTTTGTATAAGTAA+AGG | - | chr5.1:56419507-56419526 | MS.gene35871:CDS | 20.0% |
| !!! | ATATTTTATTTAGACTCGTA+TGG | + | chr5.1:56418427-56418446 | None:intergenic | 20.0% |
| !!! | ATTTCGAAACACTTTAATTT+TGG | + | chr5.1:56420318-56420337 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTTTAGGGATTT+GGG | + | chr5.1:56419450-56419469 | None:intergenic | 20.0% |
| ! | AAAAACACATTCTGTCAATA+TGG | + | chr5.1:56419538-56419557 | None:intergenic | 25.0% |
| ! | AAAACGATGTATGAAAGTAA+TGG | + | chr5.1:56419722-56419741 | None:intergenic | 25.0% |
| ! | ACATTAATAGTGAAAACATG+TGG | + | chr5.1:56418719-56418738 | None:intergenic | 25.0% |
| ! | ATTAGAATGATTTCAAACCT+TGG | + | chr5.1:56419696-56419715 | None:intergenic | 25.0% |
| ! | ATTATAGTAAGCTTGCATTA+AGG | + | chr5.1:56420483-56420502 | None:intergenic | 25.0% |
| ! | GTATAAAACAATTACAATGC+AGG | - | chr5.1:56419897-56419916 | MS.gene35871:intron | 25.0% |
| ! | TAACATAAATGCATTATACC+TGG | + | chr5.1:56420854-56420873 | None:intergenic | 25.0% |
| ! | TAACTAACTTTAATGATTGC+TGG | - | chr5.1:56418020-56418039 | MS.gene35871:intron | 25.0% |
| ! | TACTAGTATAGTAACAATTG+AGG | - | chr5.1:56420658-56420677 | MS.gene35871:intron | 25.0% |
| ! | TAGTTAATACAGTTGCAAAT+TGG | + | chr5.1:56418006-56418025 | None:intergenic | 25.0% |
| ! | TATAATTATATCCATATCCC+TGG | - | chr5.1:56418516-56418535 | MS.gene35871:CDS | 25.0% |
| ! | TGAATTCAAAAATCAGCATT+TGG | + | chr5.1:56421114-56421133 | None:intergenic | 25.0% |
| ! | TTAATGCAAGCTTACTATAA+TGG | - | chr5.1:56420482-56420501 | MS.gene35871:intron | 25.0% |
| ! | TTTACAATTCAAAACCAAGA+AGG | - | chr5.1:56419043-56419062 | MS.gene35871:CDS | 25.0% |
| ! | TTTGATAAACCTTTCGAAAT+AGG | - | chr5.1:56419228-56419247 | MS.gene35871:intron | 25.0% |
| !! | CTAAATACGAGTTTGAAATA+TGG | - | chr5.1:56419352-56419371 | MS.gene35871:intron | 25.0% |
| !! | TTTTTGTATAAGTAAAGGCA+GGG | - | chr5.1:56419512-56419531 | MS.gene35871:CDS | 25.0% |
| !!! | AAGTTGTTCAAGTTGAAATA+TGG | - | chr5.1:56420608-56420627 | MS.gene35871:intron | 25.0% |
| !!! | AATGTGTTTTTATGATGCAT+AGG | - | chr5.1:56419547-56419566 | MS.gene35871:CDS | 25.0% |
| !!! | ACTATTTTATGCTACTTACT+TGG | - | chr5.1:56417880-56417899 | MS.gene35871:CDS | 25.0% |
| !!! | ATGTGTTTTTATGATGCATA+GGG | - | chr5.1:56419548-56419567 | MS.gene35871:CDS | 25.0% |
| !!! | GAACCTATTTTTCATTCTAA+AGG | - | chr5.1:56419875-56419894 | MS.gene35871:intron | 25.0% |
| !!! | TTTACCATTTTTTAACGACA+CGG | - | chr5.1:56420253-56420272 | MS.gene35871:intron | 25.0% |
| AAACACTTACAACAAACTGA+TGG | + | chr5.1:56417951-56417970 | None:intergenic | 30.0% | |
| ACATAGATTCACATCTCAAT+TGG | - | chr5.1:56421169-56421188 | MS.gene35871:intron | 30.0% | |
| ATAGATTCACATCTCAATTG+GGG | - | chr5.1:56421171-56421190 | MS.gene35871:intron | 30.0% | |
| ATGCATTATACCTGGATTAT+CGG | + | chr5.1:56420846-56420865 | None:intergenic | 30.0% | |
| ATTGTTGTGAATCAGGAATT+TGG | - | chr5.1:56421133-56421152 | MS.gene35871:intron | 30.0% | |
| CATAGATTCACATCTCAATT+GGG | - | chr5.1:56421170-56421189 | MS.gene35871:intron | 30.0% | |
| CATTCAAATCCTATTTCGAA+AGG | + | chr5.1:56419240-56419259 | None:intergenic | 30.0% | |
| CTGAACCAACTATAAAGAAA+TGG | + | chr5.1:56420709-56420728 | None:intergenic | 30.0% | |
| CTTTATATTGCAGCAAAATG+TGG | - | chr5.1:56419776-56419795 | MS.gene35871:intron | 30.0% | |
| CTTTCGAAATAGGATTTGAA+TGG | - | chr5.1:56419238-56419257 | MS.gene35871:intron | 30.0% | |
| TAAAACACTGACACAAACAT+CGG | + | chr5.1:56421002-56421021 | None:intergenic | 30.0% | |
| TCCAAAACCGAATTGAAATT+TGG | + | chr5.1:56419316-56419335 | None:intergenic | 30.0% | |
| TCGTTAAAAAATGGTAAAGC+CGG | + | chr5.1:56420251-56420270 | None:intergenic | 30.0% | |
| TGAAGATTACCAAGAAGAAT+GGG | + | chr5.1:56419184-56419203 | None:intergenic | 30.0% | |
| TGAATTCATTGTTGTGAATC+AGG | - | chr5.1:56421126-56421145 | MS.gene35871:intron | 30.0% | |
| TGAGTTTATTGTTCACTGTA+GGG | - | chr5.1:56420345-56420364 | MS.gene35871:intron | 30.0% | |
| TTGAAGATTACCAAGAAGAA+TGG | + | chr5.1:56419185-56419204 | None:intergenic | 30.0% | |
| ! | AACAACTTTGTTCCTTTTCT+AGG | + | chr5.1:56420596-56420615 | None:intergenic | 30.0% |
| ! | AAGTGTTTAAGACCATAATG+AGG | + | chr5.1:56418225-56418244 | None:intergenic | 30.0% |
| ! | CATTTCTTTATAGTTGGTTC+AGG | - | chr5.1:56420707-56420726 | MS.gene35871:intron | 30.0% |
| ! | CTTTTTGTATAAGTAAAGGC+AGG | - | chr5.1:56419511-56419530 | MS.gene35871:CDS | 30.0% |
| ! | TCCAAATTTCAATTCGGTTT+TGG | - | chr5.1:56419312-56419331 | MS.gene35871:intron | 30.0% |
| ! | TCTTAAGAGAATTGTTTCTC+CGG | + | chr5.1:56419946-56419965 | None:intergenic | 30.0% |
| ! | TGTTTGTGTCAGTGTTTTAT+AGG | - | chr5.1:56421003-56421022 | MS.gene35871:CDS | 30.0% |
| !! | TGTGTTTTTATGATGCATAG+GGG | - | chr5.1:56419549-56419568 | MS.gene35871:CDS | 30.0% |
| !! | TTCGTAACTTTTGAAGAACT+CGG | + | chr5.1:56418819-56418838 | None:intergenic | 30.0% |
| !! | TTTATAGTTGGTTCAGGTTT+TGG | - | chr5.1:56420713-56420732 | MS.gene35871:intron | 30.0% |
| !!! | CTTGGTTTTGAATTGTAAAG+CGG | + | chr5.1:56419042-56419061 | None:intergenic | 30.0% |
| AAAACCAAGAAGGAACACTA+TGG | - | chr5.1:56419053-56419072 | MS.gene35871:CDS | 35.0% | |
| AAATCTGTGGTAAAAACACC+AGG | + | chr5.1:56420512-56420531 | None:intergenic | 35.0% | |
| ACCAACGAATTATGTGACTA+TGG | + | chr5.1:56418283-56418302 | None:intergenic | 35.0% | |
| ACCATAGTCACATAATTCGT+TGG | - | chr5.1:56418279-56418298 | MS.gene35871:intron | 35.0% | |
| AGAATGGGAAATTCTCTAGT+TGG | + | chr5.1:56419169-56419188 | None:intergenic | 35.0% | |
| AGACACATAAGAAGATTGTG+AGG | + | chr5.1:56418918-56418937 | None:intergenic | 35.0% | |
| AGAGAATTTCCCATTCTTCT+TGG | - | chr5.1:56419172-56419191 | MS.gene35871:CDS | 35.0% | |
| ATGGTTTGATAGAGATCCAA+TGG | - | chr5.1:56419573-56419592 | MS.gene35871:intron | 35.0% | |
| ATGTTTGGATCATAGTCACA+TGG | + | chr5.1:56418885-56418904 | None:intergenic | 35.0% | |
| ATTACACAGGAAATGTTCCT+AGG | - | chr5.1:56420558-56420577 | MS.gene35871:intron | 35.0% | |
| ATTATATCTCTTCCCAACAG+TGG | + | chr5.1:56418502-56418521 | None:intergenic | 35.0% | |
| CCTATACAGTTCAATTACAC+AGG | - | chr5.1:56420545-56420564 | MS.gene35871:intron | 35.0% | |
| CCTGTGTAATTGAACTGTAT+AGG | + | chr5.1:56420548-56420567 | None:intergenic | 35.0% | |
| CGAATTATGTGACTATGGTT+TGG | + | chr5.1:56418278-56418297 | None:intergenic | 35.0% | |
| CGACGATCCAAATTTCAATT+CGG | - | chr5.1:56419306-56419325 | MS.gene35871:intron | 35.0% | |
| CTGCAAAACAATCTGAACAT+TGG | + | chr5.1:56420636-56420655 | None:intergenic | 35.0% | |
| GACAGTTCTTGCATATTGAA+AGG | + | chr5.1:56418628-56418647 | None:intergenic | 35.0% | |
| GACCATTCGATCTTTATCAA+TGG | - | chr5.1:56419374-56419393 | MS.gene35871:intron | 35.0% | |
| GGGTTCCATTTCTTTATAGT+TGG | - | chr5.1:56420701-56420720 | MS.gene35871:intron | 35.0% | |
| GTGAGTTTATTGTTCACTGT+AGG | - | chr5.1:56420344-56420363 | MS.gene35871:intron | 35.0% | |
| GTGATCAAAGTAACAAATGC+TGG | - | chr5.1:56418154-56418173 | MS.gene35871:intron | 35.0% | |
| GTGTAATTGAACTGTATAGG+AGG | + | chr5.1:56420545-56420564 | None:intergenic | 35.0% | |
| GTGTATGCAACAGATACATT+TGG | + | chr5.1:56419634-56419653 | None:intergenic | 35.0% | |
| TAGGATGTTGAGAAATCCAT+GGG | - | chr5.1:56418958-56418977 | MS.gene35871:CDS | 35.0% | |
| TAGGTCATGTGAATGTTTCA+TGG | - | chr5.1:56421022-56421041 | MS.gene35871:CDS | 35.0% | |
| TATGCAACAGATACATTTGG+AGG | + | chr5.1:56419631-56419650 | None:intergenic | 35.0% | |
| TATTTAGACTCGTATGGTGT+TGG | + | chr5.1:56418421-56418440 | None:intergenic | 35.0% | |
| TCTCTTGCATAGCTTATACT+AGG | - | chr5.1:56421064-56421083 | MS.gene35871:CDS | 35.0% | |
| TGAGGAACATAGTGAATGTT+TGG | + | chr5.1:56418900-56418919 | None:intergenic | 35.0% | |
| TGCATATTGAAAGGAAGAAG+TGG | + | chr5.1:56418619-56418638 | None:intergenic | 35.0% | |
| TGCATTAAGGAAGTTGTTCT+AGG | + | chr5.1:56420470-56420489 | None:intergenic | 35.0% | |
| TTAAGACAAACACAGTTCAC+AGG | - | chr5.1:56419601-56419620 | MS.gene35871:intron | 35.0% | |
| TTACACAGGAAATGTTCCTA+GGG | - | chr5.1:56420559-56420578 | MS.gene35871:intron | 35.0% | |
| TTAGGATGTTGAGAAATCCA+TGG | - | chr5.1:56418957-56418976 | MS.gene35871:CDS | 35.0% | |
| TTATATCTCTTCCCAACAGT+GGG | + | chr5.1:56418501-56418520 | None:intergenic | 35.0% | |
| TTATTGTTCACTGTAGGGTT+AGG | - | chr5.1:56420350-56420369 | MS.gene35871:intron | 35.0% | |
| ! | AACTAGCTCTCTTAAAGTGA+TGG | + | chr5.1:56419210-56419229 | None:intergenic | 35.0% |
| ! | TGACTATGGTTTGGATAAAC+AGG | + | chr5.1:56418269-56418288 | None:intergenic | 35.0% |
| ! | TTTTATGATGCATAGGGGAA+TGG | - | chr5.1:56419554-56419573 | MS.gene35871:CDS | 35.0% |
| !! | ACATCGTTTTAAATTGCAGC+TGG | - | chr5.1:56419732-56419751 | MS.gene35871:intron | 35.0% |
| !! | CAATGTTCAGATTGTTTTGC+AGG | - | chr5.1:56420634-56420653 | MS.gene35871:intron | 35.0% |
| !! | TTTTGAAGAACTCGGTACTT+GGG | + | chr5.1:56418811-56418830 | None:intergenic | 35.0% |
| !!! | CACATAATTCGTTGGTTTTG+AGG | - | chr5.1:56418287-56418306 | MS.gene35871:intron | 35.0% |
| AACACTAGAGTCCTCATGAT+AGG | - | chr5.1:56420062-56420081 | MS.gene35871:CDS | 40.0% | |
| AATACTATTGGAACACCTCC+TGG | - | chr5.1:56420794-56420813 | MS.gene35871:intron | 40.0% | |
| AATGAAAGCTCCATAGACAG+TGG | + | chr5.1:56419107-56419126 | None:intergenic | 40.0% | |
| AATGGTAAAGCCGGCAAAAT+AGG | + | chr5.1:56420242-56420261 | None:intergenic | 40.0% | |
| AGTGTTGTGTAGTGAATCAC+TGG | - | chr5.1:56418473-56418492 | MS.gene35871:CDS | 40.0% | |
| ATCACCCTATGCATGTTCAT+GGG | - | chr5.1:56420681-56420700 | MS.gene35871:intron | 40.0% | |
| ATGTGAATGTTTCATGGTCG+CGG | - | chr5.1:56421028-56421047 | MS.gene35871:CDS | 40.0% | |
| ATTATCGGCCTTGAAACGAA+TGG | + | chr5.1:56420831-56420850 | None:intergenic | 40.0% | |
| CAGAATGACTGTTGTTGCTA+CGG | - | chr5.1:56420016-56420035 | MS.gene35871:CDS | 40.0% | |
| CTTATGTGTCTTTGTGCAAC+AGG | - | chr5.1:56418927-56418946 | MS.gene35871:CDS | 40.0% | |
| GAACATCTATAGAGATCTCC+TGG | + | chr5.1:56419670-56419689 | None:intergenic | 40.0% | |
| GAATGATTTCAAACCTTGGC+TGG | + | chr5.1:56419692-56419711 | None:intergenic | 40.0% | |
| GCACAAATCCTAATAGTCCA+AGG | - | chr5.1:56420384-56420403 | MS.gene35871:intron | 40.0% | |
| GCATTCACATCAAGGATTAG+AGG | - | chr5.1:56420287-56420306 | MS.gene35871:intron | 40.0% | |
| GCTATGCAAGAGAGAGATAT+CGG | + | chr5.1:56421057-56421076 | None:intergenic | 40.0% | |
| GCTGCAAATCTTGTTCCATT+TGG | + | chr5.1:56420419-56420438 | None:intergenic | 40.0% | |
| GCTTACTATAATGGTGTTCC+TGG | - | chr5.1:56420491-56420510 | MS.gene35871:intron | 40.0% | |
| GGACATTGTGTCACATAACT+AGG | + | chr5.1:56418992-56419011 | None:intergenic | 40.0% | |
| GGCATAGACTTGAAAACGTA+CGG | + | chr5.1:56419925-56419944 | None:intergenic | 40.0% | |
| GGCCATTGATAAAGATCGAA+TGG | + | chr5.1:56419379-56419398 | None:intergenic | 40.0% | |
| GTTCCAATAGTATTCCTCAC+AGG | + | chr5.1:56420788-56420807 | None:intergenic | 40.0% | |
| GTTGTCAAATGCAGCATTCA+TGG | + | chr5.1:56420171-56420190 | None:intergenic | 40.0% | |
| GTTTGTCTTAAGAGAGCCAT+TGG | + | chr5.1:56419592-56419611 | None:intergenic | 40.0% | |
| TACACAGGAAATGTTCCTAG+GGG | - | chr5.1:56420560-56420579 | MS.gene35871:intron | 40.0% | |
| TAGCAACAACAGTCATTCTG+TGG | + | chr5.1:56420016-56420035 | None:intergenic | 40.0% | |
| TATATCTCTTCCCAACAGTG+GGG | + | chr5.1:56418500-56418519 | None:intergenic | 40.0% | |
| TATCATGAGGACTCTAGTGT+TGG | + | chr5.1:56420063-56420082 | None:intergenic | 40.0% | |
| TCTGTTGCATACACCATGAA+CGG | - | chr5.1:56419640-56419659 | MS.gene35871:intron | 40.0% | |
| TTCAAACTGCAACAGTGAAG+AGG | - | chr5.1:56418050-56418069 | MS.gene35871:intron | 40.0% | |
| TTCACATCTCAATTGGGGTT+TGG | - | chr5.1:56421176-56421195 | MS.gene35871:intron | 40.0% | |
| TTGAACTGTATAGGAGGAAC+AGG | + | chr5.1:56420539-56420558 | None:intergenic | 40.0% | |
| TTTATCAATGGCCACTGATG+TGG | - | chr5.1:56419386-56419405 | MS.gene35871:intron | 40.0% | |
| TTTGAAGAACTCGGTACTTG+GGG | + | chr5.1:56418810-56418829 | None:intergenic | 40.0% | |
| ! | ACAGCACTTTTGGTAGAGAA+TGG | - | chr5.1:56421201-56421220 | MS.gene35871:CDS | 40.0% |
| ! | ACCTTCAAGACCTATTTTGC+CGG | - | chr5.1:56420229-56420248 | MS.gene35871:intron | 40.0% |
| ! | AGGACATTGATTGTTTGACC+TGG | + | chr5.1:56420089-56420108 | None:intergenic | 40.0% |
| ! | CTTTTGGTAGAGAATGGAGT+TGG | - | chr5.1:56421207-56421226 | MS.gene35871:CDS | 40.0% |
| ! | GAGGTATCACTGACTGTAAT+GGG | + | chr5.1:56421233-56421252 | None:intergenic | 40.0% |
| ! | GGATAAGGAGAACCCATTTT+CGG | + | chr5.1:56419136-56419155 | None:intergenic | 40.0% |
| ! | GTCTTGAAGGTGGTCTATTT+TGG | + | chr5.1:56420220-56420239 | None:intergenic | 40.0% |
| ! | GTTGGCTTAGAGAAAGGATA+AGG | + | chr5.1:56419151-56419170 | None:intergenic | 40.0% |
| ! | TCTCTAGTTGGCTTAGAGAA+AGG | + | chr5.1:56419157-56419176 | None:intergenic | 40.0% |
| ! | TGTTTTCTGATGTCCCACAT+CGG | + | chr5.1:56418650-56418669 | None:intergenic | 40.0% |
| ! | TTTCTAAGAGCCACTGTCTA+TGG | - | chr5.1:56419094-56419113 | MS.gene35871:CDS | 40.0% |
| !! | CTTTTGAAGAACTCGGTACT+TGG | + | chr5.1:56418812-56418831 | None:intergenic | 40.0% |
| !!! | GTACGTTTTCAAGTCTATGC+CGG | - | chr5.1:56419924-56419943 | MS.gene35871:intron | 40.0% |
| AACGTAGCAGGATCAGTTCT+TGG | + | chr5.1:56420749-56420768 | None:intergenic | 45.0% | |
| AACTGTATAGGAGGAACAGG+AGG | + | chr5.1:56420536-56420555 | None:intergenic | 45.0% | |
| ACACAATGTCCAATCCAACC+AGG | - | chr5.1:56419001-56419020 | MS.gene35871:CDS | 45.0% | |
| ACCAAGAAGGAACACTATGG+TGG | - | chr5.1:56419056-56419075 | MS.gene35871:CDS | 45.0% | |
| ACCGTAAATGGACAGTTTCC+TGG | - | chr5.1:56418097-56418116 | MS.gene35871:intron | 45.0% | |
| AGGAACAGGAGGAAAATCTG+TGG | + | chr5.1:56420525-56420544 | None:intergenic | 45.0% | |
| ATCGTCACTCGTCCTCATTA+TGG | - | chr5.1:56418210-56418229 | MS.gene35871:intron | 45.0% | |
| ATGCAAGAACTGTCCGATGT+GGG | - | chr5.1:56418634-56418653 | MS.gene35871:CDS | 45.0% | |
| ATGCTTAGTCGGTACGCTAT+GGG | + | chr5.1:56418784-56418803 | None:intergenic | 45.0% | |
| ATGTGTAACTTCCTCCTGGT+TGG | + | chr5.1:56419018-56419037 | None:intergenic | 45.0% | |
| CACATATGCCAGTGTCGTAT+CGG | + | chr5.1:56420914-56420933 | None:intergenic | 45.0% | |
| CAGTGGATGGAGATGTTGTA+AGG | + | chr5.1:56418181-56418200 | None:intergenic | 45.0% | |
| CCAAGAATTCGTCAGAACTG+GGG | - | chr5.1:56418377-56418396 | MS.gene35871:CDS | 45.0% | |
| CCAATAGTATTCCTCACAGG+TGG | + | chr5.1:56420785-56420804 | None:intergenic | 45.0% | |
| CCACCTGTGAGGAATACTAT+TGG | - | chr5.1:56420782-56420801 | MS.gene35871:intron | 45.0% | |
| CCCAAGAATTCGTCAGAACT+GGG | - | chr5.1:56418376-56418395 | MS.gene35871:CDS | 45.0% | |
| CCTTGACACCTTGGACTATT+AGG | + | chr5.1:56420395-56420414 | None:intergenic | 45.0% | |
| CGAAGGATACTCACCGTAAA+TGG | - | chr5.1:56418085-56418104 | MS.gene35871:intron | 45.0% | |
| CGATGATAGTTACCAGTGGA+TGG | + | chr5.1:56418194-56418213 | None:intergenic | 45.0% | |
| CTATAGAACCGATACGACAC+TGG | - | chr5.1:56420903-56420922 | MS.gene35871:intron | 45.0% | |
| CTCTATAGATGTTCCAGCCA+AGG | - | chr5.1:56419676-56419695 | MS.gene35871:intron | 45.0% | |
| CTGCAACTGCATTCACATCA+AGG | - | chr5.1:56420279-56420298 | MS.gene35871:intron | 45.0% | |
| CTTACAACATCTCCATCCAC+TGG | - | chr5.1:56418179-56418198 | MS.gene35871:intron | 45.0% | |
| GAAATGTTCCTAGGGGTTTG+TGG | - | chr5.1:56420567-56420586 | MS.gene35871:intron | 45.0% | |
| GATCACCCTATGCATGTTCA+TGG | - | chr5.1:56420680-56420699 | MS.gene35871:intron | 45.0% | |
| GCCAGGAAACTGTCCATTTA+CGG | + | chr5.1:56418101-56418120 | None:intergenic | 45.0% | |
| GGAACCCATGAACATGCATA+GGG | + | chr5.1:56420688-56420707 | None:intergenic | 45.0% | |
| GGCAAAATAGGTCTTGAAGG+TGG | + | chr5.1:56420230-56420249 | None:intergenic | 45.0% | |
| GGTTCTATAGCTAGAGCACA+TGG | + | chr5.1:56420893-56420912 | None:intergenic | 45.0% | |
| GGTTTGTGGACACCTAGAAA+AGG | - | chr5.1:56420581-56420600 | MS.gene35871:intron | 45.0% | |
| GTCAAATGCAGCATTCATGG+CGG | + | chr5.1:56420168-56420187 | None:intergenic | 45.0% | |
| GTGACGATGATAGTTACCAG+TGG | + | chr5.1:56418198-56418217 | None:intergenic | 45.0% | |
| TAACTTCCTCCTGGTTGGAT+TGG | + | chr5.1:56419013-56419032 | None:intergenic | 45.0% | |
| TATGCAAGAACTGTCCGATG+TGG | - | chr5.1:56418633-56418652 | MS.gene35871:CDS | 45.0% | |
| TATGCTTAGTCGGTACGCTA+TGG | + | chr5.1:56418785-56418804 | None:intergenic | 45.0% | |
| TGATGTGAATGCAGTTGCAG+TGG | + | chr5.1:56420279-56420298 | None:intergenic | 45.0% | |
| TGGAACCCATGAACATGCAT+AGG | + | chr5.1:56420689-56420708 | None:intergenic | 45.0% | |
| TGGCTGCATGAGATTGTTGT+TGG | + | chr5.1:56419267-56419286 | None:intergenic | 45.0% | |
| TGTCTTTGTGCAACAGGCAT+GGG | - | chr5.1:56418933-56418952 | MS.gene35871:CDS | 45.0% | |
| TTGAAGAACTCGGTACTTGG+GGG | + | chr5.1:56418809-56418828 | None:intergenic | 45.0% | |
| TTTGACCTGGTCCTATCATG+AGG | + | chr5.1:56420076-56420095 | None:intergenic | 45.0% | |
| ! | ATGAGGACTCTAGTGTTGGA+AGG | + | chr5.1:56420059-56420078 | None:intergenic | 45.0% |
| ! | CCCAGTTCTGACGAATTCTT+GGG | + | chr5.1:56418379-56418398 | None:intergenic | 45.0% |
| ! | CCTAATAGTCCAAGGTGTCA+AGG | - | chr5.1:56420392-56420411 | MS.gene35871:intron | 45.0% |
| ! | GTGGCCGTGTCGTTAAAAAA+TGG | + | chr5.1:56420260-56420279 | None:intergenic | 45.0% |
| ! | TAGCATTGAGGTAGATCTGG+TGG | + | chr5.1:56421258-56421277 | None:intergenic | 45.0% |
| ! | TGTTTCATTTGCTGCAGCAG+AGG | - | chr5.1:56417918-56417937 | MS.gene35871:CDS | 45.0% |
| ! | TTAGACTCGTATGGTGTTGG+TGG | + | chr5.1:56418418-56418437 | None:intergenic | 45.0% |
| ! | TTGAGAAATCCATGGGCTGA+TGG | - | chr5.1:56418965-56418984 | MS.gene35871:CDS | 45.0% |
| !! | GGAGGTATCACTGACTGTAA+TGG | + | chr5.1:56421234-56421253 | None:intergenic | 45.0% |
| AATCACTGGTCCCCACTGTT+GGG | - | chr5.1:56418487-56418506 | MS.gene35871:CDS | 50.0% | |
| ACATGGTTCGCAATTCGCTC+CGG | + | chr5.1:56418868-56418887 | None:intergenic | 50.0% | |
| ACGTGCCTAGCATGGTTACT+TGG | + | chr5.1:56418547-56418566 | None:intergenic | 50.0% | |
| ACTATTGGAACACCTCCTGG+TGG | - | chr5.1:56420797-56420816 | MS.gene35871:intron | 50.0% | |
| AGAGGCTGTGCAAAACACGA+AGG | - | chr5.1:56418068-56418087 | MS.gene35871:intron | 50.0% | |
| AGAGTCCTCATGATAGGACC+AGG | - | chr5.1:56420068-56420087 | MS.gene35871:CDS | 50.0% | |
| ATCTCCTGGTTGACCGTTCA+TGG | + | chr5.1:56419656-56419675 | None:intergenic | 50.0% | |
| ATGCAGCATTCATGGCGGTT+TGG | + | chr5.1:56420163-56420182 | None:intergenic | 50.0% | |
| ATGGGTCGCCATTCGTTTCA+AGG | - | chr5.1:56420820-56420839 | MS.gene35871:intron | 50.0% | |
| CAAAAGCAACGTGCCTAGCA+TGG | + | chr5.1:56418555-56418574 | None:intergenic | 50.0% | |
| CAATGTCCAATCCAACCAGG+AGG | - | chr5.1:56419004-56419023 | MS.gene35871:CDS | 50.0% | |
| CATTGAGGTAGATCTGGTGG+TGG | + | chr5.1:56421255-56421274 | None:intergenic | 50.0% | |
| CCATTTGGTCCTTGACACCT+TGG | + | chr5.1:56420404-56420423 | None:intergenic | 50.0% | |
| CGGTATGTGTAACTTCCTCC+TGG | + | chr5.1:56419022-56419041 | None:intergenic | 50.0% | |
| CGTTTCAAGGCCGATAATCC+AGG | - | chr5.1:56420833-56420852 | MS.gene35871:intron | 50.0% | |
| CTATGGTGGCATGCTCATAC+TGG | - | chr5.1:56419070-56419089 | MS.gene35871:CDS | 50.0% | |
| GCCACCATAGTGTTCCTTCT+TGG | + | chr5.1:56419060-56419079 | None:intergenic | 50.0% | |
| GCCCAAGAATTCGTCAGAAC+TGG | - | chr5.1:56418375-56418394 | MS.gene35871:CDS | 50.0% | |
| GCCGGCAAAATAGGTCTTGA+AGG | + | chr5.1:56420233-56420252 | None:intergenic | 50.0% | |
| GCCTAGCATGGTTACTTGGT+GGG | + | chr5.1:56418543-56418562 | None:intergenic | 50.0% | |
| GGCTGACTGCGTGACTATAT+TGG | - | chr5.1:56419407-56419426 | MS.gene35871:intron | 50.0% | |
| GTCTTATCCAATCGACTGCG+TGG | + | chr5.1:56419287-56419306 | None:intergenic | 50.0% | |
| GTGGTTGATCAGCTGTGACA+AGG | + | chr5.1:56420109-56420128 | None:intergenic | 50.0% | |
| GTGTCTTTGTGCAACAGGCA+TGG | - | chr5.1:56418932-56418951 | MS.gene35871:CDS | 50.0% | |
| TAACTAGGTCCATCAGCCCA+TGG | + | chr5.1:56418977-56418996 | None:intergenic | 50.0% | |
| TACACCATGAACGGTCAACC+AGG | - | chr5.1:56419649-56419668 | MS.gene35871:intron | 50.0% | |
| TCCCACCAAGTAACCATGCT+AGG | - | chr5.1:56418539-56418558 | MS.gene35871:CDS | 50.0% | |
| TCGACAAGGTTGAACGTAGC+AGG | + | chr5.1:56420761-56420780 | None:intergenic | 50.0% | |
| TGAAGAACTCGGTACTTGGG+GGG | + | chr5.1:56418808-56418827 | None:intergenic | 50.0% | |
| TGCCTAGCATGGTTACTTGG+TGG | + | chr5.1:56418544-56418563 | None:intergenic | 50.0% | |
| ! | ACTTGGGGGGTATGCTTAGT+CGG | + | chr5.1:56418795-56418814 | None:intergenic | 50.0% |
| ! | AGCGAGGGACGGAGATTTTA+TGG | - | chr5.1:56418132-56418151 | MS.gene35871:intron | 50.0% |
| ! | ATGGTTACTTGGTGGGACCA+GGG | + | chr5.1:56418536-56418555 | None:intergenic | 50.0% |
| ! | CCAAGGTGTCAAGGACCAAA+TGG | - | chr5.1:56420401-56420420 | MS.gene35871:intron | 50.0% |
| ! | CCCCAGTTCTGACGAATTCT+TGG | + | chr5.1:56418380-56418399 | None:intergenic | 50.0% |
| ! | GGGTTTGGCAACAGCACTTT+TGG | - | chr5.1:56421191-56421210 | MS.gene35871:intron | 50.0% |
| !! | CATGCTAGGCACGTTGCTTT+TGG | - | chr5.1:56418553-56418572 | MS.gene35871:CDS | 50.0% |
| !! | TACTCCAAAGTACCGCGAAC+CGG | + | chr5.1:56418338-56418357 | None:intergenic | 50.0% |
| !! | TCGTATGGTGTTGGTGGTGT+GGG | + | chr5.1:56418412-56418431 | None:intergenic | 50.0% |
| !! | TTCGCGGTACTTTGGAGTAC+CGG | - | chr5.1:56418339-56418358 | MS.gene35871:CDS | 50.0% |
| !!! | TTTTGAGGTGAACCGCGAAC+TGG | - | chr5.1:56418302-56418321 | MS.gene35871:CDS | 50.0% |
| ACCACCTGGCCGATACTACA+TGG | - | chr5.1:56420124-56420143 | MS.gene35871:CDS | 55.0% | |
| ACCTGGCCGATACTACATGG+CGG | - | chr5.1:56420127-56420146 | MS.gene35871:CDS | 55.0% | |
| ACCTTGTCGATCCACCTGTG+AGG | - | chr5.1:56420771-56420790 | MS.gene35871:intron | 55.0% | |
| ATTCGCTCCGGTACGTGGTA+CGG | + | chr5.1:56418856-56418875 | None:intergenic | 55.0% | |
| CTAGGTGTCCACAAACCCCT+AGG | + | chr5.1:56420578-56420597 | None:intergenic | 55.0% | |
| GAATCACTGGTCCCCACTGT+TGG | - | chr5.1:56418486-56418505 | MS.gene35871:CDS | 55.0% | |
| GGAACGTACGAACCAGTTCG+CGG | + | chr5.1:56418317-56418336 | None:intergenic | 55.0% | |
| GTCACAGCTGATCAACCACC+TGG | - | chr5.1:56420110-56420129 | MS.gene35871:CDS | 55.0% | |
| TCCTCACAGGTGGATCGACA+AGG | + | chr5.1:56420775-56420794 | None:intergenic | 55.0% | |
| TGTGCAACAGGCATGGGCTT+AGG | - | chr5.1:56418939-56418958 | MS.gene35871:CDS | 55.0% | |
| TTGGAACACCTCCTGGTGGA+TGG | - | chr5.1:56420801-56420820 | MS.gene35871:intron | 55.0% | |
| TTGGGCGAACTGTAGCGAAC+CGG | + | chr5.1:56418361-56418380 | None:intergenic | 55.0% | |
| ! | ACTTGGTGGGACCAGGGATA+TGG | + | chr5.1:56418530-56418549 | None:intergenic | 55.0% |
| ! | CATGGTTACTTGGTGGGACC+AGG | + | chr5.1:56418537-56418556 | None:intergenic | 55.0% |
| ! | TGGAACACCTCCTGGTGGAT+GGG | - | chr5.1:56420802-56420821 | MS.gene35871:intron | 55.0% |
| !! | CTCGTATGGTGTTGGTGGTG+TGG | + | chr5.1:56418413-56418432 | None:intergenic | 55.0% |
| !! | GCGAACTGGTTCGTACGTTC+CGG | - | chr5.1:56418316-56418335 | MS.gene35871:CDS | 55.0% |
| !! | TGAGGTAGATCTGGTGGTGG+AGG | + | chr5.1:56421252-56421271 | None:intergenic | 55.0% |
| CACGCAGTCAGCCACATCAG+TGG | + | chr5.1:56419400-56419419 | None:intergenic | 60.0% | |
| CATGCAGCCACGCAGTCGAT+TGG | - | chr5.1:56419277-56419296 | MS.gene35871:intron | 60.0% | |
| CCAACGATCGAAGCGAGGGA+CGG | - | chr5.1:56418121-56418140 | MS.gene35871:intron | 60.0% | |
| CGCGTGCCGCCATGTAGTAT+CGG | + | chr5.1:56420136-56420155 | None:intergenic | 60.0% | |
| CGTCCCTCGCTTCGATCGTT+GGG | + | chr5.1:56418123-56418142 | None:intergenic | 60.0% | |
| TCCGGTACGTGGTACGGGTT+CGG | + | chr5.1:56418850-56418869 | None:intergenic | 60.0% | |
| TCGCAATTCGCTCCGGTACG+TGG | + | chr5.1:56418861-56418880 | None:intergenic | 60.0% | |
| TGGCCCAACGATCGAAGCGA+GGG | - | chr5.1:56418117-56418136 | MS.gene35871:intron | 60.0% | |
| TTCGCTCCGGTACGTGGTAC+GGG | + | chr5.1:56418855-56418874 | None:intergenic | 60.0% | |
| ! | CGTTCCGGTTCGCGGTACTT+TGG | - | chr5.1:56418331-56418350 | MS.gene35871:CDS | 60.0% |
| ! | GGTTCGTACGTTCCGGTTCG+CGG | - | chr5.1:56418323-56418342 | MS.gene35871:CDS | 60.0% |
| !! | GCCATGTAGTATCGGCCAGG+TGG | + | chr5.1:56420128-56420147 | None:intergenic | 60.0% |
| !! | GTGTTGGTGGTGTGGGTCTG+CGG | + | chr5.1:56418405-56418424 | None:intergenic | 60.0% |
| ATGGCGACCCATCCACCAGG+AGG | + | chr5.1:56420812-56420831 | None:intergenic | 65.0% | |
| CCCGAACCCGTACCACGTAC+CGG | - | chr5.1:56418846-56418865 | MS.gene35871:CDS | 65.0% | |
| CCGGTACGTGGTACGGGTTC+GGG | + | chr5.1:56418849-56418868 | None:intergenic | 65.0% | |
| CCGTCCCTCGCTTCGATCGT+TGG | + | chr5.1:56418124-56418143 | None:intergenic | 65.0% | |
| CGAATGGCGACCCATCCACC+AGG | + | chr5.1:56420815-56420834 | None:intergenic | 65.0% | |
| CTCGCTTCGATCGTTGGGCC+AGG | + | chr5.1:56418118-56418137 | None:intergenic | 65.0% | |
| CTGGCCCAACGATCGAAGCG+AGG | - | chr5.1:56418116-56418135 | MS.gene35871:intron | 65.0% | |
| GTGGTACGGGTTCGGGTACG+CGG | + | chr5.1:56418842-56418861 | None:intergenic | 65.0% | |
| !! | GCCGCCATGTAGTATCGGCC+AGG | + | chr5.1:56420131-56420150 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 56417874 | 56421278 | 56417874 | ID=MS.gene35871 |
| chr5.1 | mRNA | 56417874 | 56421278 | 56417874 | ID=MS.gene35871.t1;Parent=MS.gene35871 |
| chr5.1 | exon | 56421192 | 56421278 | 56421192 | ID=MS.gene35871.t1.exon1;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56421192 | 56421278 | 56421192 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| chr5.1 | exon | 56420952 | 56421103 | 56420952 | ID=MS.gene35871.t1.exon2;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56420952 | 56421103 | 56420952 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| chr5.1 | exon | 56419959 | 56420203 | 56419959 | ID=MS.gene35871.t1.exon3;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56419959 | 56420203 | 56419959 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| chr5.1 | exon | 56419455 | 56419583 | 56419455 | ID=MS.gene35871.t1.exon4;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56419455 | 56419583 | 56419455 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| chr5.1 | exon | 56418298 | 56419233 | 56418298 | ID=MS.gene35871.t1.exon5;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56418298 | 56419233 | 56418298 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| chr5.1 | exon | 56417874 | 56418004 | 56417874 | ID=MS.gene35871.t1.exon6;Parent=MS.gene35871.t1 |
| chr5.1 | CDS | 56417874 | 56418004 | 56417874 | ID=cds.MS.gene35871.t1;Parent=MS.gene35871.t1 |
| Gene Sequence |
| Protein sequence |
