Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067703.t1 | XP_003605534.1 | 58.9 | 470 | 84 | 5 | 1 | 364 | 1 | 467 | 2.30E-128 | 468.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067703.t1 | Q9FM89 | 30.0 | 180 | 102 | 6 | 12 | 180 | 6 | 172 | 1.1e-09 | 65.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067703.t1 | G7JP66 | 58.9 | 470 | 84 | 5 | 1 | 364 | 1 | 467 | 1.7e-128 | 468.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067703 | MS.gene002112 | PPI |
| MS.gene067703 | MS.gene033695 | PPI |
| MS.gene072003 | MS.gene067703 | PPI |
| MS.gene067703 | MS.gene54959 | PPI |
| MS.gene072000 | MS.gene067703 | PPI |
| MS.gene065373 | MS.gene067703 | PPI |
| MS.gene51793 | MS.gene067703 | PPI |
| MS.gene071257 | MS.gene067703 | PPI |
| MS.gene54960 | MS.gene067703 | PPI |
| MS.gene033694 | MS.gene067703 | PPI |
| MS.gene067703 | MS.gene024262 | PPI |
| MS.gene01653 | MS.gene067703 | PPI |
| MS.gene047137 | MS.gene067703 | PPI |
| MS.gene067703 | MS.gene045772 | PPI |
| MS.gene047136 | MS.gene067703 | PPI |
| MS.gene067703 | MS.gene51795 | PPI |
| MS.gene78164 | MS.gene067703 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067703.t1 | MTR_4g032730 | 74.766 | 214 | 53 | 1 | 152 | 364 | 254 | 467 | 9.55e-112 | 334 |
| MS.gene067703.t1 | MTR_4g032730 | 72.222 | 162 | 33 | 3 | 1 | 153 | 1 | 159 | 9.98e-69 | 223 |
| MS.gene067703.t1 | MTR_8g077460 | 36.524 | 397 | 189 | 13 | 5 | 363 | 3 | 374 | 8.00e-57 | 189 |
| MS.gene067703.t1 | MTR_8g062270 | 50.233 | 215 | 87 | 4 | 150 | 363 | 258 | 453 | 1.81e-56 | 191 |
| MS.gene067703.t1 | MTR_8g062270 | 49.342 | 152 | 65 | 3 | 9 | 152 | 13 | 160 | 3.10e-38 | 142 |
| MS.gene067703.t1 | MTR_8g468840 | 43.223 | 273 | 134 | 4 | 93 | 364 | 198 | 450 | 5.66e-55 | 187 |
| MS.gene067703.t1 | MTR_8g468840 | 52.258 | 155 | 63 | 4 | 12 | 161 | 14 | 162 | 1.89e-42 | 154 |
| MS.gene067703.t1 | MTR_8g467800 | 46.460 | 226 | 99 | 3 | 141 | 363 | 246 | 452 | 6.88e-55 | 187 |
| MS.gene067703.t1 | MTR_8g467800 | 53.521 | 142 | 58 | 4 | 2 | 142 | 9 | 143 | 3.23e-36 | 137 |
| MS.gene067703.t1 | MTR_5g092960 | 48.485 | 231 | 92 | 4 | 141 | 364 | 252 | 462 | 1.07e-53 | 184 |
| MS.gene067703.t1 | MTR_5g092960 | 56.410 | 156 | 60 | 3 | 2 | 152 | 9 | 161 | 3.36e-48 | 169 |
| MS.gene067703.t1 | MTR_5g092960 | 55.769 | 156 | 61 | 2 | 2 | 152 | 9 | 161 | 1.39e-48 | 169 |
| MS.gene067703.t1 | MTR_5g092960 | 49.138 | 116 | 51 | 2 | 141 | 249 | 252 | 366 | 1.72e-18 | 86.3 |
| MS.gene067703.t1 | MTR_2g083840 | 40.143 | 279 | 134 | 7 | 93 | 363 | 203 | 456 | 5.43e-45 | 160 |
| MS.gene067703.t1 | MTR_2g083840 | 47.586 | 145 | 70 | 4 | 12 | 152 | 21 | 163 | 1.38e-29 | 119 |
| MS.gene067703.t1 | MTR_8g468760 | 55.346 | 159 | 56 | 5 | 3 | 152 | 2 | 154 | 4.29e-43 | 154 |
| MS.gene067703.t1 | MTR_8g468760 | 38.768 | 276 | 113 | 9 | 93 | 363 | 194 | 418 | 8.78e-33 | 127 |
| MS.gene067703.t1 | MTR_8g468810 | 37.324 | 284 | 138 | 8 | 93 | 363 | 206 | 462 | 1.10e-42 | 154 |
| MS.gene067703.t1 | MTR_8g468810 | 47.436 | 156 | 73 | 3 | 2 | 150 | 11 | 164 | 3.89e-35 | 134 |
| MS.gene067703.t1 | MTR_8g058970 | 39.161 | 286 | 133 | 9 | 93 | 363 | 217 | 476 | 1.18e-40 | 149 |
| MS.gene067703.t1 | MTR_8g058970 | 44.970 | 169 | 71 | 4 | 4 | 152 | 11 | 177 | 3.43e-31 | 123 |
| MS.gene067703.t1 | MTR_8g058965 | 50.943 | 159 | 72 | 3 | 3 | 159 | 4 | 158 | 3.17e-39 | 145 |
| MS.gene067703.t1 | MTR_8g058965 | 37.681 | 207 | 105 | 2 | 159 | 363 | 271 | 455 | 1.98e-29 | 118 |
| MS.gene067703.t1 | MTR_8g467800 | 53.521 | 142 | 58 | 4 | 2 | 142 | 9 | 143 | 3.25e-37 | 137 |
| MS.gene067703.t1 | MTR_8g467790 | 31.183 | 372 | 147 | 11 | 11 | 304 | 147 | 487 | 3.96e-37 | 140 |
| MS.gene067703.t1 | MTR_4g050250 | 41.778 | 225 | 112 | 5 | 3 | 221 | 12 | 223 | 6.73e-37 | 138 |
| MS.gene067703.t1 | MTR_4g050250 | 37.013 | 154 | 75 | 2 | 158 | 310 | 286 | 418 | 1.80e-18 | 86.7 |
| MS.gene067703.t1 | MTR_8g468810 | 47.436 | 156 | 73 | 3 | 2 | 150 | 11 | 164 | 3.22e-36 | 134 |
| MS.gene067703.t1 | MTR_8g468810 | 47.436 | 156 | 73 | 3 | 2 | 150 | 11 | 164 | 3.98e-36 | 134 |
| MS.gene067703.t1 | MTR_8g468810 | 47.436 | 156 | 73 | 3 | 2 | 150 | 11 | 164 | 5.52e-36 | 134 |
| MS.gene067703.t1 | MTR_2g086020 | 32.665 | 349 | 173 | 11 | 40 | 363 | 3 | 314 | 5.93e-36 | 133 |
| MS.gene067703.t1 | MTR_8g014160 | 32.817 | 387 | 222 | 14 | 12 | 363 | 41 | 424 | 1.37e-35 | 134 |
| MS.gene067703.t1 | MTR_8g468810 | 47.436 | 156 | 73 | 3 | 2 | 150 | 11 | 164 | 1.51e-35 | 133 |
| MS.gene067703.t1 | MTR_8g468810 | 37.952 | 166 | 91 | 5 | 93 | 250 | 206 | 367 | 2.68e-19 | 88.6 |
| MS.gene067703.t1 | MTR_8g014210 | 40.777 | 206 | 95 | 6 | 160 | 363 | 50 | 230 | 8.25e-35 | 128 |
| MS.gene067703.t1 | MTR_8g469020 | 41.237 | 194 | 111 | 2 | 12 | 203 | 7 | 199 | 1.01e-33 | 130 |
| MS.gene067703.t1 | MTR_8g469020 | 36.715 | 207 | 106 | 4 | 159 | 363 | 267 | 450 | 2.42e-32 | 126 |
| MS.gene067703.t1 | MTR_5g021550 | 49.359 | 156 | 68 | 6 | 2 | 152 | 13 | 162 | 1.28e-32 | 120 |
| MS.gene067703.t1 | MTR_8g014290 | 46.061 | 165 | 70 | 8 | 1 | 152 | 1 | 159 | 1.66e-30 | 114 |
| MS.gene067703.t1 | MTR_4g024710 | 39.806 | 206 | 97 | 5 | 160 | 363 | 166 | 346 | 3.18e-30 | 118 |
| MS.gene067703.t1 | MTR_8g014260 | 41.176 | 204 | 92 | 6 | 163 | 363 | 272 | 450 | 1.09e-29 | 119 |
| MS.gene067703.t1 | MTR_8g014260 | 40.588 | 170 | 94 | 5 | 12 | 176 | 16 | 183 | 8.94e-23 | 99.4 |
| MS.gene067703.t1 | MTR_8g062010 | 46.980 | 149 | 70 | 3 | 9 | 153 | 6 | 149 | 5.44e-29 | 116 |
| MS.gene067703.t1 | MTR_8g062010 | 33.816 | 207 | 113 | 3 | 159 | 363 | 245 | 429 | 1.61e-24 | 104 |
| MS.gene067703.t1 | MTR_8g445780 | 44.199 | 181 | 85 | 10 | 1 | 176 | 1 | 170 | 1.55e-27 | 112 |
| MS.gene067703.t1 | MTR_8g445780 | 35.780 | 218 | 109 | 7 | 103 | 318 | 201 | 389 | 3.46e-21 | 94.4 |
| MS.gene067703.t1 | MTR_8g062080 | 45.860 | 157 | 69 | 7 | 10 | 158 | 21 | 169 | 2.40e-26 | 109 |
| MS.gene067703.t1 | MTR_8g062080 | 31.308 | 214 | 116 | 4 | 159 | 363 | 253 | 444 | 5.66e-21 | 94.0 |
| MS.gene067703.t1 | MTR_8g062310 | 44.643 | 168 | 75 | 7 | 11 | 176 | 24 | 175 | 3.67e-26 | 108 |
| MS.gene067703.t1 | MTR_8g062310 | 31.401 | 207 | 118 | 3 | 159 | 363 | 243 | 427 | 6.32e-22 | 96.7 |
| MS.gene067703.t1 | MTR_8g070950 | 32.110 | 218 | 122 | 4 | 150 | 363 | 238 | 433 | 3.96e-26 | 108 |
| MS.gene067703.t1 | MTR_8g070950 | 47.097 | 155 | 65 | 5 | 2 | 153 | 11 | 151 | 2.70e-25 | 106 |
| MS.gene067703.t1 | MTR_8g062300 | 41.477 | 176 | 85 | 7 | 2 | 165 | 13 | 182 | 8.04e-26 | 108 |
| MS.gene067703.t1 | MTR_8g062300 | 30.702 | 228 | 118 | 4 | 154 | 363 | 271 | 476 | 2.74e-24 | 103 |
| MS.gene067703.t1 | MTR_4g024720 | 42.135 | 178 | 76 | 7 | 2 | 158 | 11 | 182 | 3.88e-24 | 99.0 |
| MS.gene067703.t1 | MTR_1089s0010 | 26.969 | 419 | 203 | 13 | 7 | 364 | 3 | 379 | 5.07e-24 | 102 |
| MS.gene067703.t1 | MTR_7g026500 | 26.392 | 413 | 215 | 15 | 10 | 363 | 12 | 394 | 1.46e-23 | 101 |
| MS.gene067703.t1 | MTR_4g024745 | 39.011 | 182 | 85 | 5 | 160 | 340 | 120 | 276 | 8.45e-22 | 94.4 |
| MS.gene067703.t1 | MTR_6g040270 | 28.365 | 416 | 183 | 20 | 14 | 361 | 10 | 378 | 1.07e-19 | 89.7 |
| MS.gene067703.t1 | MTR_5g073420 | 26.963 | 382 | 192 | 19 | 1 | 333 | 1 | 344 | 3.39e-19 | 88.2 |
| MS.gene067703.t1 | MTR_5g008950 | 25.187 | 401 | 212 | 15 | 14 | 363 | 1 | 364 | 1.37e-18 | 86.7 |
| MS.gene067703.t1 | MTR_7g098510 | 24.582 | 419 | 213 | 17 | 7 | 363 | 13 | 390 | 1.43e-18 | 86.7 |
| MS.gene067703.t1 | MTR_1g041245 | 23.601 | 411 | 223 | 14 | 10 | 363 | 9 | 385 | 2.17e-18 | 85.9 |
| MS.gene067703.t1 | MTR_7g032380 | 24.538 | 379 | 229 | 11 | 10 | 363 | 9 | 355 | 2.73e-18 | 85.5 |
| MS.gene067703.t1 | MTR_3g099830 | 26.044 | 407 | 225 | 17 | 1 | 364 | 1 | 374 | 3.60e-18 | 85.1 |
| MS.gene067703.t1 | MTR_3g105060 | 23.969 | 388 | 234 | 16 | 10 | 363 | 12 | 372 | 5.36e-18 | 84.7 |
| MS.gene067703.t1 | MTR_7g056433 | 25.238 | 420 | 225 | 19 | 1 | 363 | 1 | 388 | 1.19e-17 | 84.0 |
| MS.gene067703.t1 | MTR_5g039490 | 27.105 | 380 | 229 | 19 | 10 | 363 | 18 | 375 | 2.77e-17 | 82.8 |
| MS.gene067703.t1 | MTR_5g058000 | 27.384 | 409 | 208 | 14 | 7 | 363 | 3 | 374 | 3.72e-17 | 82.4 |
| MS.gene067703.t1 | MTR_1g085120 | 27.143 | 420 | 207 | 18 | 6 | 363 | 88 | 470 | 4.50e-17 | 82.8 |
| MS.gene067703.t1 | MTR_1g085120 | 27.143 | 420 | 207 | 18 | 6 | 363 | 163 | 545 | 4.86e-17 | 82.8 |
| MS.gene067703.t1 | MTR_5g080710 | 30.508 | 236 | 128 | 9 | 130 | 356 | 238 | 446 | 7.60e-16 | 79.0 |
| MS.gene067703.t1 | MTR_5g080710 | 31.646 | 158 | 91 | 5 | 4 | 158 | 25 | 168 | 7.72e-12 | 66.6 |
| MS.gene067703.t1 | MTR_7g098570 | 24.422 | 389 | 237 | 15 | 11 | 360 | 19 | 389 | 3.18e-15 | 77.0 |
| MS.gene067703.t1 | MTR_7g056420 | 25.562 | 356 | 199 | 13 | 12 | 333 | 9 | 332 | 2.46e-14 | 75.1 |
| MS.gene067703.t1 | MTR_7g056430 | 25.562 | 356 | 199 | 13 | 12 | 333 | 9 | 332 | 2.80e-14 | 74.7 |
| MS.gene067703.t1 | MTR_3g107100 | 33.987 | 153 | 94 | 5 | 1 | 153 | 1 | 146 | 1.14e-13 | 72.0 |
| MS.gene067703.t1 | MTR_5g031970 | 25.926 | 405 | 200 | 18 | 2 | 362 | 6 | 354 | 1.15e-13 | 71.6 |
| MS.gene067703.t1 | MTR_2g007550 | 25.984 | 381 | 213 | 13 | 1 | 361 | 1 | 332 | 1.27e-13 | 71.6 |
| MS.gene067703.t1 | MTR_8g014230 | 55.172 | 58 | 25 | 1 | 279 | 336 | 20 | 76 | 1.41e-13 | 66.6 |
| MS.gene067703.t1 | MTR_1g108800 | 26.440 | 382 | 213 | 18 | 7 | 363 | 3 | 341 | 1.69e-13 | 71.2 |
| MS.gene067703.t1 | MTR_7g056447 | 30.120 | 166 | 100 | 6 | 12 | 176 | 9 | 159 | 2.32e-13 | 70.1 |
| MS.gene067703.t1 | MTR_6g011460 | 27.089 | 395 | 239 | 17 | 6 | 363 | 38 | 420 | 2.94e-13 | 70.9 |
| MS.gene067703.t1 | MTR_7g034115 | 27.446 | 368 | 200 | 16 | 11 | 335 | 10 | 353 | 3.65e-13 | 70.5 |
| MS.gene067703.t1 | MTR_5g039450 | 23.678 | 397 | 211 | 15 | 11 | 361 | 5 | 355 | 3.96e-13 | 70.1 |
| MS.gene067703.t1 | MTR_5g073370 | 26.562 | 384 | 181 | 17 | 12 | 334 | 5 | 348 | 4.95e-13 | 70.1 |
| MS.gene067703.t1 | MTR_3g107160 | 23.902 | 410 | 223 | 12 | 7 | 361 | 5 | 380 | 6.59e-13 | 69.7 |
| MS.gene067703.t1 | MTR_7g115270 | 23.636 | 385 | 226 | 15 | 1 | 333 | 1 | 369 | 2.26e-12 | 68.2 |
| MS.gene067703.t1 | MTR_7g055943 | 25.000 | 416 | 223 | 19 | 8 | 364 | 36 | 421 | 5.24e-12 | 67.0 |
| MS.gene067703.t1 | MTR_5g084070 | 28.049 | 246 | 139 | 9 | 118 | 356 | 205 | 419 | 6.57e-12 | 67.0 |
| MS.gene067703.t1 | MTR_5g084070 | 28.477 | 151 | 94 | 4 | 8 | 158 | 9 | 145 | 8.13e-11 | 63.5 |
| MS.gene067703.t1 | MTR_3g108150 | 33.566 | 143 | 81 | 5 | 12 | 153 | 13 | 142 | 3.57e-11 | 64.3 |
| MS.gene067703.t1 | MTR_7g034120 | 30.645 | 186 | 99 | 8 | 200 | 363 | 130 | 307 | 5.89e-11 | 63.2 |
| MS.gene067703.t1 | MTR_5g012840 | 25.305 | 328 | 177 | 13 | 30 | 334 | 6 | 288 | 8.64e-11 | 62.8 |
| MS.gene067703.t1 | MTR_1g107385 | 25.962 | 416 | 221 | 17 | 12 | 364 | 32 | 423 | 9.52e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067703.t1 | AT5G56430 | 24.870 | 386 | 222 | 17 | 14 | 363 | 4 | 357 | 8.24e-13 | 69.3 |
| MS.gene067703.t1 | AT3G59200 | 33.058 | 121 | 72 | 3 | 12 | 127 | 7 | 123 | 1.96e-12 | 68.2 |
| MS.gene067703.t1 | AT3G59200 | 30.464 | 151 | 89 | 4 | 12 | 157 | 7 | 146 | 2.44e-12 | 68.6 |
Find 89 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTGGAAACTCTAAATA+TGG | 0.196642 | 4.1:-68204231 | None:intergenic |
| TTTAGCAATGCCAGTGCTTT+TGG | 0.221650 | 4.1:+68203962 | MS.gene067703:intron |
| GGTTGTTTGGATGGTGGTTT+TGG | 0.256692 | 4.1:-68202136 | None:intergenic |
| AAGAATTGCATCTCACTTTA+CGG | 0.270990 | 4.1:+68202406 | MS.gene067703:CDS |
| TGAAGCAGATAGCAAAATTC+TGG | 0.306632 | 4.1:-68204246 | None:intergenic |
| GGAGAGGATGTGGCGGAGTA+AGG | 0.321950 | 4.1:-68202103 | None:intergenic |
| CAGGAAAATCATGTTGAAAC+AGG | 0.324675 | 4.1:-68204286 | None:intergenic |
| TTGTATAATTCATCTAAATA+TGG | 0.327173 | 4.1:+68204462 | MS.gene067703:CDS |
| ACGTGTAGAACACGTCTTTA+CGG | 0.340572 | 4.1:-68202338 | None:intergenic |
| AAAATCTTTATAGTGAATAA+AGG | 0.355933 | 4.1:-68204589 | None:intergenic |
| TCTTCCAGAGGTTGCGATAA+TGG | 0.357302 | 4.1:-68202173 | None:intergenic |
| GGCCGTCGAAATTGAAGGTT+TGG | 0.358654 | 4.1:-68202200 | None:intergenic |
| GCTCGGAAGAGATTGAATAA+AGG | 0.391161 | 4.1:-68204052 | None:intergenic |
| CTCGGAAGAGATTGAATAAA+GGG | 0.395145 | 4.1:-68204051 | None:intergenic |
| ACGCTCGGTGTGCTTGTCTT+CGG | 0.422673 | 4.1:-68202226 | None:intergenic |
| AATCTCTTCCGAGCTCTCTC+TGG | 0.422765 | 4.1:+68204061 | MS.gene067703:CDS |
| AGACACTTAGGCACACTATC+AGG | 0.430855 | 4.1:-68204552 | None:intergenic |
| GAGAGGATGTGGCGGAGTAA+GGG | 0.431868 | 4.1:-68202102 | None:intergenic |
| AATTTATCTGCTGCAGCAAC+CGG | 0.438687 | 4.1:+68204692 | MS.gene067703:CDS |
| CGGTGTGCTTGTCTTCGGAT+TGG | 0.444201 | 4.1:-68202221 | None:intergenic |
| AAGTGAGATGCAATTCTTCA+AGG | 0.449824 | 4.1:-68202401 | None:intergenic |
| ATTTCTGAAGCATGTCGAAC+AGG | 0.454319 | 4.1:-68204305 | None:intergenic |
| ACAGATTGACTTTCAAGAAT+GGG | 0.461899 | 4.1:-68204025 | None:intergenic |
| AACAGATTGACTTTCAAGAA+TGG | 0.462740 | 4.1:-68204026 | None:intergenic |
| ATCACCTTTCTCTGAATGGC+TGG | 0.463238 | 4.1:+68204524 | MS.gene067703:CDS |
| TTGAAGACGATGGTTATTAG+TGG | 0.469778 | 4.1:+68204669 | MS.gene067703:CDS |
| GCGATAATGGCGGGAGATGA+GGG | 0.474032 | 4.1:-68202160 | None:intergenic |
| TTAGATGAATTATACAAGGC+TGG | 0.477804 | 4.1:-68204456 | None:intergenic |
| ATTCTGGAAACTCTAAATAT+GGG | 0.479414 | 4.1:-68204230 | None:intergenic |
| AGATGCAATTCTTCAAGGTC+TGG | 0.480288 | 4.1:-68202396 | None:intergenic |
| CATCTCAGTGAAATTGAAGT+TGG | 0.482703 | 4.1:-68204764 | None:intergenic |
| CCCGCCATTATCGCAACCTC+TGG | 0.489631 | 4.1:+68202169 | MS.gene067703:CDS |
| GTTTAATTCCAGAGAGAGCT+CGG | 0.491395 | 4.1:-68204069 | None:intergenic |
| ACTCCTCACTTGCTCTAACC+TGG | 0.496134 | 4.1:+68202470 | MS.gene067703:CDS |
| TCGAATCACCTTTCTCTGAA+TGG | 0.496325 | 4.1:+68204520 | MS.gene067703:CDS |
| TAGGGAGGAAGGAGAGGATG+TGG | 0.496425 | 4.1:-68202113 | None:intergenic |
| TATCTGCTTCATCTAGATGT+TGG | 0.496429 | 4.1:+68204258 | MS.gene067703:CDS |
| AGAGGATGTGGCGGAGTAAG+GGG | 0.498351 | 4.1:-68202101 | None:intergenic |
| TTCTTCAAGGTCTGGTCCAA+TGG | 0.505625 | 4.1:-68202388 | None:intergenic |
| ATGCTTCTTTCACGTTGCAC+AGG | 0.507644 | 4.1:-68203988 | None:intergenic |
| ATTATGAAAGTTTGTAGCAT+GGG | 0.510938 | 4.1:-68204330 | None:intergenic |
| GCTCTAACCTGGTCTTTCTC+CGG | 0.512531 | 4.1:+68202481 | MS.gene067703:CDS |
| CTCCAAACCTTCAATTTCGA+CGG | 0.512996 | 4.1:+68202198 | MS.gene067703:CDS |
| GGATTGGCCGTCGAAATTGA+AGG | 0.514033 | 4.1:-68202205 | None:intergenic |
| ATGAATTCCACCCACTCCTC+CGG | 0.515093 | 4.1:-68204711 | None:intergenic |
| TGCGATAATGGCGGGAGATG+AGG | 0.515129 | 4.1:-68202161 | None:intergenic |
| TTTCATAATTCTCCAATGCA+TGG | 0.518608 | 4.1:+68204344 | MS.gene067703:CDS |
| GGACATGGCAACAAGAAAGT+TGG | 0.526159 | 4.1:-68202317 | None:intergenic |
| GCTGGATCAATACTTAATAG+AGG | 0.527087 | 4.1:+68204099 | MS.gene067703:CDS |
| TGCTGCAGCAACCGGAGGAG+TGG | 0.531237 | 4.1:+68204700 | MS.gene067703:CDS |
| GCTGCAGCAACCGGAGGAGT+GGG | 0.537149 | 4.1:+68204701 | MS.gene067703:CDS |
| CCAGAGGTTGCGATAATGGC+GGG | 0.538761 | 4.1:-68202169 | None:intergenic |
| TTAACCAGCCATTCAGAGAA+AGG | 0.540945 | 4.1:-68204528 | None:intergenic |
| ATGTGGCGGAGTAAGGGGTT+TGG | 0.541441 | 4.1:-68202096 | None:intergenic |
| TGGCACATGGCAGATCCTCT+TGG | 0.542692 | 4.1:-68204744 | None:intergenic |
| GCACAGGTTTCCAAAAGCAC+TGG | 0.544418 | 4.1:-68203972 | None:intergenic |
| GCAGCAACCGGAGGAGTGGG+TGG | 0.547301 | 4.1:+68204704 | MS.gene067703:CDS |
| GGAGGAAGGAGAGGATGTGG+CGG | 0.549483 | 4.1:-68202110 | None:intergenic |
| ATAATTCATCTAAATATGGA+TGG | 0.557459 | 4.1:+68204466 | MS.gene067703:CDS |
| CATCTAAATATGGATGGGTG+TGG | 0.559222 | 4.1:+68204472 | MS.gene067703:CDS |
| AAGTGCGATGCAAGACACTT+AGG | 0.565053 | 4.1:-68204564 | None:intergenic |
| TAAAGGAAAGAGACACGAGC+TGG | 0.566292 | 4.1:+68204611 | MS.gene067703:CDS |
| CTTCTCCATCTTCGTCAACA+CGG | 0.570169 | 4.1:+68202257 | MS.gene067703:CDS |
| AAGTGAGGAGTGCGAGTGGG+AGG | 0.570468 | 4.1:-68202458 | None:intergenic |
| ACGTGGGTACGTACCGCCAT+TGG | 0.570838 | 4.1:+68202372 | MS.gene067703:CDS |
| TGGAATTAAACATCTAACGC+TGG | 0.578972 | 4.1:+68204081 | MS.gene067703:CDS |
| GAGGACCGTGTTGACGAAGA+TGG | 0.581049 | 4.1:-68202262 | None:intergenic |
| ATATTTAGATGAATTATACA+AGG | 0.582248 | 4.1:-68204460 | None:intergenic |
| GATAATGGCGGGAGATGAGG+GGG | 0.584709 | 4.1:-68202158 | None:intergenic |
| AATTATGAAAGTTTGTAGCA+TGG | 0.586276 | 4.1:-68204331 | None:intergenic |
| TAATTCATCTAAATATGGAT+GGG | 0.590376 | 4.1:+68204467 | MS.gene067703:CDS |
| AGACCAGGTTAGAGCAAGTG+AGG | 0.593011 | 4.1:-68202473 | None:intergenic |
| GAGCAAGTGAGGAGTGCGAG+TGG | 0.598414 | 4.1:-68202462 | None:intergenic |
| GAACTGGACAAACCATGCAT+TGG | 0.599849 | 4.1:-68204356 | None:intergenic |
| CGATAATGGCGGGAGATGAG+GGG | 0.602848 | 4.1:-68202159 | None:intergenic |
| GTGAAATTGAAGTTGGCACA+TGG | 0.610139 | 4.1:-68204757 | None:intergenic |
| AGCAAGTGAGGAGTGCGAGT+GGG | 0.612042 | 4.1:-68202461 | None:intergenic |
| GGAGAAGAACATGAAACGCT+CGG | 0.618731 | 4.1:-68202241 | None:intergenic |
| CACGTCTTCGATTGATACGT+GGG | 0.626901 | 4.1:+68202356 | MS.gene067703:CDS |
| TTCATTTCTAATCTGCCAAG+AGG | 0.631912 | 4.1:+68204729 | MS.gene067703:CDS |
| TTATCTGCTGCAGCAACCGG+AGG | 0.638782 | 4.1:+68204695 | MS.gene067703:CDS |
| AGAACACGTCTTTACGGACA+TGG | 0.642386 | 4.1:-68202332 | None:intergenic |
| TTCAAGGTCTGGTCCAATGG+CGG | 0.643389 | 4.1:-68202385 | None:intergenic |
| AGGTTTGGAGAGTCTTCCAG+AGG | 0.648623 | 4.1:-68202185 | None:intergenic |
| TCCAGAGGTTGCGATAATGG+CGG | 0.649590 | 4.1:-68202170 | None:intergenic |
| AGGAAAATCATGTTGAAACA+GGG | 0.649607 | 4.1:-68204285 | None:intergenic |
| ACACGTCTTCGATTGATACG+TGG | 0.666544 | 4.1:+68202355 | MS.gene067703:CDS |
| ATCGAGACTCACGTAGAGCG+AGG | 0.687325 | 4.1:-68202281 | None:intergenic |
| ATAATGGCGGGAGATGAGGG+GGG | 0.694795 | 4.1:-68202157 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATATAGAAAACTTTT+CGG | - | chr4.1:68204128-68204147 | None:intergenic | 10.0% |
| !! | AAAATCTTTATAGTGAATAA+AGG | - | chr4.1:68204592-68204611 | None:intergenic | 15.0% |
| !! | AAATGACAATAAGTATTTAT+AGG | - | chr4.1:68203433-68203452 | None:intergenic | 15.0% |
| !! | ATATTATAACTTAGATATGT+TGG | - | chr4.1:68203573-68203592 | None:intergenic | 15.0% |
| !! | ATATTTAGATGAATTATACA+AGG | - | chr4.1:68204463-68204482 | None:intergenic | 15.0% |
| !! | TTAATGTTGAAAAATGAAAA+TGG | + | chr4.1:68203669-68203688 | MS.gene067703:intron | 15.0% |
| !! | TTGTATAATTCATCTAAATA+TGG | + | chr4.1:68204462-68204481 | MS.gene067703:CDS | 15.0% |
| !!! | ATTCACTATAAAGATTTTAA+AGG | + | chr4.1:68204594-68204613 | MS.gene067703:CDS | 15.0% |
| !!! | TAAAAGTTTTGCTTAAAAAT+TGG | + | chr4.1:68203185-68203204 | MS.gene067703:intron | 15.0% |
| !! | ATAATTCATCTAAATATGGA+TGG | + | chr4.1:68204466-68204485 | MS.gene067703:CDS | 20.0% |
| !! | GATTTGAAGAAAAAAAAACA+GGG | - | chr4.1:68203819-68203838 | None:intergenic | 20.0% |
| !! | TAATTCATCTAAATATGGAT+GGG | + | chr4.1:68204467-68204486 | MS.gene067703:CDS | 20.0% |
| !! | TATAATATAGACCAAATACA+TGG | + | chr4.1:68203585-68203604 | MS.gene067703:intron | 20.0% |
| !! | TGATTTGAAGAAAAAAAAAC+AGG | - | chr4.1:68203820-68203839 | None:intergenic | 20.0% |
| ! | AAATGTTCTGTTAATTGTTG+AGG | + | chr4.1:68202694-68202713 | MS.gene067703:intron | 25.0% |
| ! | AATTATGAAAGTTTGTAGCA+TGG | - | chr4.1:68204334-68204353 | None:intergenic | 25.0% |
| ! | ATAACCCTAAACAACAATAA+GGG | - | chr4.1:68202519-68202538 | None:intergenic | 25.0% |
| ! | ATCTAATACTTCCATGTATT+TGG | - | chr4.1:68203599-68203618 | None:intergenic | 25.0% |
| ! | ATTATGAAAGTTTGTAGCAT+GGG | - | chr4.1:68204333-68204352 | None:intergenic | 25.0% |
| ! | CAATCTTATTGTCACATTTA+GGG | + | chr4.1:68203453-68203472 | MS.gene067703:intron | 25.0% |
| ! | TCAATCTTATTGTCACATTT+AGG | + | chr4.1:68203452-68203471 | MS.gene067703:intron | 25.0% |
| ! | TCTTAAAATAGTCTGATACA+AGG | + | chr4.1:68203149-68203168 | MS.gene067703:intron | 25.0% |
| !! | AATAACAGAAACGTATTTTC+TGG | - | chr4.1:68203223-68203242 | None:intergenic | 25.0% |
| !! | AATTCTGGAAACTCTAAATA+TGG | - | chr4.1:68204234-68204253 | None:intergenic | 25.0% |
| !! | ATTCTGGAAACTCTAAATAT+GGG | - | chr4.1:68204233-68204252 | None:intergenic | 25.0% |
| !!! | AAATACATGGAAGTATTAGA+TGG | + | chr4.1:68203598-68203617 | MS.gene067703:intron | 25.0% |
| !!! | ACTATTTTAAGAGAGATAGA+AGG | - | chr4.1:68203141-68203160 | None:intergenic | 25.0% |
| !!! | CTATTTTAAGAGAGATAGAA+GGG | - | chr4.1:68203140-68203159 | None:intergenic | 25.0% |
| !!! | TTTTAGAGTAATAGTCGTTT+TGG | + | chr4.1:68202561-68202580 | MS.gene067703:intron | 25.0% |
| AAGAATTGCATCTCACTTTA+CGG | + | chr4.1:68202406-68202425 | MS.gene067703:CDS | 30.0% | |
| AATGCAATGCCTTAATCTAT+GGG | + | chr4.1:68203894-68203913 | MS.gene067703:intron | 30.0% | |
| ACCAAAAAAGTTGTCAAGTT+CGG | + | chr4.1:68203792-68203811 | MS.gene067703:intron | 30.0% | |
| ACGTAATTCTAATTGTTCTG+TGG | - | chr4.1:68203633-68203652 | None:intergenic | 30.0% | |
| AGGAAAATCATGTTGAAACA+GGG | - | chr4.1:68204288-68204307 | None:intergenic | 30.0% | |
| CACATTTAATTACACATTCG+AGG | - | chr4.1:68202588-68202607 | None:intergenic | 30.0% | |
| CAGAACAATTAGAATTACGT+TGG | + | chr4.1:68203633-68203652 | MS.gene067703:intron | 30.0% | |
| CATAACCCTAAACAACAATA+AGG | - | chr4.1:68202520-68202539 | None:intergenic | 30.0% | |
| GTGAGAGTTAACTTAAAATC+AGG | - | chr4.1:68203356-68203375 | None:intergenic | 30.0% | |
| GTTCATCCTGTTGTTAAAAA+GGG | - | chr4.1:68204437-68204456 | None:intergenic | 30.0% | |
| TGTGTAAGTAAGTGTATTGA+AGG | - | chr4.1:68203399-68203418 | None:intergenic | 30.0% | |
| TTAGATGAATTATACAAGGC+TGG | - | chr4.1:68204459-68204478 | None:intergenic | 30.0% | |
| TTTCATAATTCTCCAATGCA+TGG | + | chr4.1:68204344-68204363 | MS.gene067703:CDS | 30.0% | |
| TTTGTATAGAGTTTGTCTCT+TGG | - | chr4.1:68203078-68203097 | None:intergenic | 30.0% | |
| ! | AACAGATTGACTTTCAAGAA+TGG | - | chr4.1:68204029-68204048 | None:intergenic | 30.0% |
| ! | ACAGATTGACTTTCAAGAAT+GGG | - | chr4.1:68204028-68204047 | None:intergenic | 30.0% |
| ! | ATTCGCTATGTTTTGCAAAA+TGG | + | chr4.1:68204639-68204658 | MS.gene067703:CDS | 30.0% |
| !! | TGTTCCATACACTTTGATTT+TGG | - | chr4.1:68202781-68202800 | None:intergenic | 30.0% |
| AAGTGAGATGCAATTCTTCA+AGG | - | chr4.1:68202404-68202423 | None:intergenic | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | + | chr4.1:68203022-68203041 | MS.gene067703:intron | 35.0% | |
| ACCAATAACAACTTGATGTG+TGG | + | chr4.1:68202735-68202754 | MS.gene067703:intron | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | - | chr4.1:68203014-68203033 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | - | chr4.1:68203102-68203121 | None:intergenic | 35.0% | |
| CAATGCAATGCCTTAATCTA+TGG | + | chr4.1:68203893-68203912 | MS.gene067703:intron | 35.0% | |
| CAGGAAAATCATGTTGAAAC+AGG | - | chr4.1:68204289-68204308 | None:intergenic | 35.0% | |
| CATATGGTGTCCTTTATGTT+TGG | + | chr4.1:68204395-68204414 | MS.gene067703:intron | 35.0% | |
| CGCATTAGAACCAAACATAA+AGG | - | chr4.1:68204408-68204427 | None:intergenic | 35.0% | |
| CTCGGAAGAGATTGAATAAA+GGG | - | chr4.1:68204054-68204073 | None:intergenic | 35.0% | |
| GAAAACAACAGCGAAAGAAA+AGG | + | chr4.1:68202821-68202840 | MS.gene067703:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | - | chr4.1:68203101-68203120 | None:intergenic | 35.0% | |
| GCAACCAAAATCAAAGTGTA+TGG | + | chr4.1:68202774-68202793 | MS.gene067703:intron | 35.0% | |
| GCTGGATCAATACTTAATAG+AGG | + | chr4.1:68204099-68204118 | MS.gene067703:CDS | 35.0% | |
| GGTTCATCCTGTTGTTAAAA+AGG | - | chr4.1:68204438-68204457 | None:intergenic | 35.0% | |
| TAACGCTACTCATCATATAG+TGG | - | chr4.1:68202924-68202943 | None:intergenic | 35.0% | |
| TATCTGCTTCATCTAGATGT+TGG | + | chr4.1:68204258-68204277 | MS.gene067703:CDS | 35.0% | |
| TCATTGCAACCCATAGATTA+AGG | - | chr4.1:68203906-68203925 | None:intergenic | 35.0% | |
| TGAAGCAGATAGCAAAATTC+TGG | - | chr4.1:68204249-68204268 | None:intergenic | 35.0% | |
| TGGAATTAAACATCTAACGC+TGG | + | chr4.1:68204081-68204100 | MS.gene067703:CDS | 35.0% | |
| TGGTCTCATGACATAAAACA+GGG | + | chr4.1:68203768-68203787 | MS.gene067703:intron | 35.0% | |
| TTCATTTCTAATCTGCCAAG+AGG | + | chr4.1:68204729-68204748 | MS.gene067703:CDS | 35.0% | |
| TTGAAGACGATGGTTATTAG+TGG | + | chr4.1:68204669-68204688 | MS.gene067703:CDS | 35.0% | |
| TTGTGACAAAAAGTTGTCTC+AGG | + | chr4.1:68203710-68203729 | MS.gene067703:intron | 35.0% | |
| ! | AACTAAAGCTTTGGTGCATA+TGG | + | chr4.1:68204379-68204398 | MS.gene067703:intron | 35.0% |
| ! | ACATCAAGTTGTTATTGGTG+TGG | - | chr4.1:68202734-68202753 | None:intergenic | 35.0% |
| ! | AGACACTTAGCAACAGTTTT+AGG | - | chr4.1:68204501-68204520 | None:intergenic | 35.0% |
| ! | ATAAGGGAAGGAAGTTTTAC+CGG | - | chr4.1:68202503-68202522 | None:intergenic | 35.0% |
| ! | CTACTCATCATATAGTGGAA+CGG | - | chr4.1:68202919-68202938 | None:intergenic | 35.0% |
| ! | TCCACACATCAAGTTGTTAT+TGG | - | chr4.1:68202739-68202758 | None:intergenic | 35.0% |
| ! | TTTTATGTCATGAGACCAGA+CGG | - | chr4.1:68203766-68203785 | None:intergenic | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | + | chr4.1:68202857-68202876 | MS.gene067703:intron | 35.0% |
| !! | ATTCATGTTTTTATCCCGTC+TGG | + | chr4.1:68203748-68203767 | MS.gene067703:intron | 35.0% |
| !! | CCTTCCCTTATTGTTGTTTA+GGG | + | chr4.1:68202512-68202531 | MS.gene067703:intron | 35.0% |
| !! | TCCTTCCCTTATTGTTGTTT+AGG | + | chr4.1:68202511-68202530 | MS.gene067703:intron | 35.0% |
| !! | TGGATTTCTTTTGAAGACGA+TGG | + | chr4.1:68204659-68204678 | MS.gene067703:CDS | 35.0% |
| !!! | ACCGAACTTGACAACTTTTT+TGG | - | chr4.1:68203796-68203815 | None:intergenic | 35.0% |
| AATTTATCTGCTGCAGCAAC+CGG | + | chr4.1:68204692-68204711 | MS.gene067703:CDS | 40.0% | |
| ACGAAATTCTTCAACCATCG+TGG | + | chr4.1:68203311-68203330 | MS.gene067703:intron | 40.0% | |
| ACGTGTAGAACACGTCTTTA+CGG | - | chr4.1:68202341-68202360 | None:intergenic | 40.0% | |
| AGATAGAAGGGCTGAAACAA+GGG | - | chr4.1:68203128-68203147 | None:intergenic | 40.0% | |
| AGATGCAATTCTTCAAGGTC+TGG | - | chr4.1:68202399-68202418 | None:intergenic | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | - | chr4.1:68203008-68203027 | None:intergenic | 40.0% | |
| CATCTAAATATGGATGGGTG+TGG | + | chr4.1:68204472-68204491 | MS.gene067703:CDS | 40.0% | |
| CCCTAAACAACAATAAGGGA+AGG | - | chr4.1:68202515-68202534 | None:intergenic | 40.0% | |
| CTCCAAACCTTCAATTTCGA+CGG | + | chr4.1:68202198-68202217 | MS.gene067703:CDS | 40.0% | |
| CTGGTCTCATGACATAAAAC+AGG | + | chr4.1:68203767-68203786 | MS.gene067703:intron | 40.0% | |
| GATGGTTGAAGAATTTCGTG+AGG | - | chr4.1:68203310-68203329 | None:intergenic | 40.0% | |
| GCAACAAAACTAGGGTTTGT+GGG | - | chr4.1:68203056-68203075 | None:intergenic | 40.0% | |
| GCTCGGAAGAGATTGAATAA+AGG | - | chr4.1:68204055-68204074 | None:intergenic | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | - | chr4.1:68203118-68203137 | None:intergenic | 40.0% | |
| GGACTACAGTGATATGTTCA+GGG | + | chr4.1:68203474-68203493 | MS.gene067703:intron | 40.0% | |
| GTCCAGTTCAACTAAAGCTT+TGG | + | chr4.1:68204370-68204389 | MS.gene067703:intron | 40.0% | |
| GTCTCTTGGCAACAAAACTA+GGG | - | chr4.1:68203064-68203083 | None:intergenic | 40.0% | |
| GTGAAATTGAAGTTGGCACA+TGG | - | chr4.1:68204760-68204779 | None:intergenic | 40.0% | |
| GTTTAATTCCAGAGAGAGCT+CGG | - | chr4.1:68204072-68204091 | None:intergenic | 40.0% | |
| TCACCTTGGGAAACACTATT+AGG | - | chr4.1:68203028-68203047 | None:intergenic | 40.0% | |
| TCGAATCACCTTTCTCTGAA+TGG | + | chr4.1:68204520-68204539 | MS.gene067703:CDS | 40.0% | |
| TGAGTAGCGTTACAAAGAGA+TGG | + | chr4.1:68202932-68202951 | MS.gene067703:intron | 40.0% | |
| TGTCTCTTGGCAACAAAACT+AGG | - | chr4.1:68203065-68203084 | None:intergenic | 40.0% | |
| TTAACCAGCCATTCAGAGAA+AGG | - | chr4.1:68204531-68204550 | None:intergenic | 40.0% | |
| TTTATGTCATGAGACCAGAC+GGG | - | chr4.1:68203765-68203784 | None:intergenic | 40.0% | |
| ! | AGCTGTCCCTTTTTAACAAC+AGG | + | chr4.1:68204428-68204447 | MS.gene067703:intron | 40.0% |
| ! | CACCAAAGCTTTAGTTGAAC+TGG | - | chr4.1:68204375-68204394 | None:intergenic | 40.0% |
| ! | TCATCATATAGTGGAACGGA+GGG | - | chr4.1:68202915-68202934 | None:intergenic | 40.0% |
| ! | TGTTTTGTGTGTACAAGCAG+AGG | + | chr4.1:68204196-68204215 | MS.gene067703:intron | 40.0% |
| ! | TTTAGCAATGCCAGTGCTTT+TGG | + | chr4.1:68203962-68203981 | MS.gene067703:intron | 40.0% |
| !! | ATTTCTGAAGCATGTCGAAC+AGG | - | chr4.1:68204308-68204327 | None:intergenic | 40.0% |
| !! | TGGATTTTTCGTGCCACTAT+GGG | - | chr4.1:68203279-68203298 | None:intergenic | 40.0% |
| !! | TTTGTGGGTTGATTCACCTT+GGG | - | chr4.1:68203041-68203060 | None:intergenic | 40.0% |
| !!! | TTTGGATGGTGGTTTTGGTA+GGG | - | chr4.1:68202134-68202153 | None:intergenic | 40.0% |
| AAGTGCGATGCAAGACACTT+AGG | - | chr4.1:68204567-68204586 | None:intergenic | 45.0% | |
| AATTTCGTGAGGCAAGTCAC+TGG | - | chr4.1:68203299-68203318 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | + | chr4.1:68202742-68202761 | MS.gene067703:intron | 45.0% | |
| ACACGTCTTCGATTGATACG+TGG | + | chr4.1:68202355-68202374 | MS.gene067703:CDS | 45.0% | |
| AGAACACGTCTTTACGGACA+TGG | - | chr4.1:68202335-68202354 | None:intergenic | 45.0% | |
| AGACACTTAGGCACACTATC+AGG | - | chr4.1:68204555-68204574 | None:intergenic | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | - | chr4.1:68202873-68202892 | None:intergenic | 45.0% | |
| ATCACCTTTCTCTGAATGGC+TGG | + | chr4.1:68204524-68204543 | MS.gene067703:CDS | 45.0% | |
| ATGCTTCTTTCACGTTGCAC+AGG | - | chr4.1:68203991-68204010 | None:intergenic | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | + | chr4.1:68202743-68202762 | MS.gene067703:intron | 45.0% | |
| CACGTCTTCGATTGATACGT+GGG | + | chr4.1:68202356-68202375 | MS.gene067703:CDS | 45.0% | |
| CTTCTCCATCTTCGTCAACA+CGG | + | chr4.1:68202257-68202276 | MS.gene067703:CDS | 45.0% | |
| GAACTGGACAAACCATGCAT+TGG | - | chr4.1:68204359-68204378 | None:intergenic | 45.0% | |
| GAATGTGTAACGAGTAGCCA+CGG | - | chr4.1:68203504-68203523 | None:intergenic | 45.0% | |
| GAGATAGAAGGGCTGAAACA+AGG | - | chr4.1:68203129-68203148 | None:intergenic | 45.0% | |
| GATATGTTCAGGGATTACCG+TGG | + | chr4.1:68203484-68203503 | MS.gene067703:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | - | chr4.1:68202979-68202998 | None:intergenic | 45.0% | |
| GGACATGGCAACAAGAAAGT+TGG | - | chr4.1:68202320-68202339 | None:intergenic | 45.0% | |
| GGAGAAGAACATGAAACGCT+CGG | - | chr4.1:68202244-68202263 | None:intergenic | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | - | chr4.1:68203007-68203026 | None:intergenic | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | - | chr4.1:68202975-68202994 | None:intergenic | 45.0% | |
| GGCAACAAAACTAGGGTTTG+TGG | - | chr4.1:68203057-68203076 | None:intergenic | 45.0% | |
| GGGACTACAGTGATATGTTC+AGG | + | chr4.1:68203473-68203492 | MS.gene067703:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | - | chr4.1:68202976-68202995 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | + | chr4.1:68202878-68202897 | MS.gene067703:intron | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | + | chr4.1:68202879-68202898 | MS.gene067703:intron | 45.0% | |
| TAAAGGAAAGAGACACGAGC+TGG | + | chr4.1:68204611-68204630 | MS.gene067703:CDS | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | - | chr4.1:68202874-68202893 | None:intergenic | 45.0% | |
| TCCAAATTGACCTAGTCTGG+GGG | + | chr4.1:68202880-68202899 | MS.gene067703:intron | 45.0% | |
| TCTTCCAGAGGTTGCGATAA+TGG | - | chr4.1:68202176-68202195 | None:intergenic | 45.0% | |
| TTCTTCAAGGTCTGGTCCAA+TGG | - | chr4.1:68202391-68202410 | None:intergenic | 45.0% | |
| ! | AGTTTTACCGGAGAAAGACC+AGG | - | chr4.1:68202491-68202510 | None:intergenic | 45.0% |
| ! | CTCATCATATAGTGGAACGG+AGG | - | chr4.1:68202916-68202935 | None:intergenic | 45.0% |
| !! | CTGGATTTTTCGTGCCACTA+TGG | - | chr4.1:68203280-68203299 | None:intergenic | 45.0% |
| !! | GGATTTTTCGTGCCACTATG+GGG | - | chr4.1:68203278-68203297 | None:intergenic | 45.0% |
| !! | GGTTGTTTGGATGGTGGTTT+TGG | - | chr4.1:68202139-68202158 | None:intergenic | 45.0% |
| !! | GTTTGTGGGTTGATTCACCT+TGG | - | chr4.1:68203042-68203061 | None:intergenic | 45.0% |
| !!! | GTTTGGATGGTGGTTTTGGT+AGG | - | chr4.1:68202135-68202154 | None:intergenic | 45.0% |
| AATCTCTTCCGAGCTCTCTC+TGG | + | chr4.1:68204061-68204080 | MS.gene067703:CDS | 50.0% | |
| ACTCCTCACTTGCTCTAACC+TGG | + | chr4.1:68202470-68202489 | MS.gene067703:CDS | 50.0% | |
| AGACCAGGTTAGAGCAAGTG+AGG | - | chr4.1:68202476-68202495 | None:intergenic | 50.0% | |
| AGGTTTGGAGAGTCTTCCAG+AGG | - | chr4.1:68202188-68202207 | None:intergenic | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | - | chr4.1:68203001-68203020 | None:intergenic | 50.0% | |
| ATGAATTCCACCCACTCCTC+CGG | - | chr4.1:68204714-68204733 | None:intergenic | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | + | chr4.1:68202877-68202896 | MS.gene067703:intron | 50.0% | |
| GGCCGTCGAAATTGAAGGTT+TGG | - | chr4.1:68202203-68202222 | None:intergenic | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | - | chr4.1:68202884-68202903 | None:intergenic | 50.0% | |
| TTCAAGGTCTGGTCCAATGG+CGG | - | chr4.1:68202388-68202407 | None:intergenic | 50.0% | |
| ! | GCACAGGTTTCCAAAAGCAC+TGG | - | chr4.1:68203975-68203994 | None:intergenic | 50.0% |
| ! | GCTCTAACCTGGTCTTTCTC+CGG | + | chr4.1:68202481-68202500 | MS.gene067703:CDS | 50.0% |
| ! | TCCAGAGGTTGCGATAATGG+CGG | - | chr4.1:68202173-68202192 | None:intergenic | 50.0% |
| ! | TTTTGGTAGGGAGGAAGGAG+AGG | - | chr4.1:68202122-68202141 | None:intergenic | 50.0% |
| !! | GGATTGGCCGTCGAAATTGA+AGG | - | chr4.1:68202208-68202227 | None:intergenic | 50.0% |
| ACGGGAAGAGGCTGGGATTT+GGG | - | chr4.1:68202989-68203008 | None:intergenic | 55.0% | |
| ATCGAGACTCACGTAGAGCG+AGG | - | chr4.1:68202284-68202303 | None:intergenic | 55.0% | |
| CGGTGTGCTTGTCTTCGGAT+TGG | - | chr4.1:68202224-68202243 | None:intergenic | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | - | chr4.1:68202996-68203015 | None:intergenic | 55.0% | |
| GATGAGGGGGGTTGTTTGGA+TGG | - | chr4.1:68202148-68202167 | None:intergenic | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | - | chr4.1:68202990-68203009 | None:intergenic | 55.0% | |
| TAGGGAGGAAGGAGAGGATG+TGG | - | chr4.1:68202116-68202135 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | - | chr4.1:68202997-68203016 | None:intergenic | 55.0% | |
| TGGCACATGGCAGATCCTCT+TGG | - | chr4.1:68204747-68204766 | None:intergenic | 55.0% | |
| TTATCTGCTGCAGCAACCGG+AGG | + | chr4.1:68204695-68204714 | MS.gene067703:CDS | 55.0% | |
| ! | AGAGGATGTGGCGGAGTAAG+GGG | - | chr4.1:68202104-68202123 | None:intergenic | 55.0% |
| ! | AGCAAGTGAGGAGTGCGAGT+GGG | - | chr4.1:68202464-68202483 | None:intergenic | 55.0% |
| ! | ATAATGGCGGGAGATGAGGG+GGG | - | chr4.1:68202160-68202179 | None:intergenic | 55.0% |
| ! | ATGTGGCGGAGTAAGGGGTT+TGG | - | chr4.1:68202099-68202118 | None:intergenic | 55.0% |
| ! | CCAGAGGTTGCGATAATGGC+GGG | - | chr4.1:68202172-68202191 | None:intergenic | 55.0% |
| ! | CGATAATGGCGGGAGATGAG+GGG | - | chr4.1:68202162-68202181 | None:intergenic | 55.0% |
| ! | GAGAGGATGTGGCGGAGTAA+GGG | - | chr4.1:68202105-68202124 | None:intergenic | 55.0% |
| ! | GAGGACCGTGTTGACGAAGA+TGG | - | chr4.1:68202265-68202284 | None:intergenic | 55.0% |
| ! | GATAATGGCGGGAGATGAGG+GGG | - | chr4.1:68202161-68202180 | None:intergenic | 55.0% |
| ! | GCGATAATGGCGGGAGATGA+GGG | - | chr4.1:68202163-68202182 | None:intergenic | 55.0% |
| ! | TGCGATAATGGCGGGAGATG+AGG | - | chr4.1:68202164-68202183 | None:intergenic | 55.0% |
| !! | ACGCTCGGTGTGCTTGTCTT+CGG | - | chr4.1:68202229-68202248 | None:intergenic | 55.0% |
| !!! | GGATGGTGGTTTTGGTAGGG+AGG | - | chr4.1:68202131-68202150 | None:intergenic | 55.0% |
| !!! | GGTGGTTTTGGTAGGGAGGA+AGG | - | chr4.1:68202127-68202146 | None:intergenic | 55.0% |
| AACGTGGCACGATGGTGTGC+TGG | - | chr4.1:68203251-68203270 | None:intergenic | 60.0% | |
| ACGTGGGTACGTACCGCCAT+TGG | + | chr4.1:68202372-68202391 | MS.gene067703:CDS | 60.0% | |
| CCCGCCATTATCGCAACCTC+TGG | + | chr4.1:68202169-68202188 | MS.gene067703:CDS | 60.0% | |
| GAGGGGGGTTGTTTGGATGG+TGG | - | chr4.1:68202145-68202164 | None:intergenic | 60.0% | |
| GCAGAAGCAACGTGCCACGA+TGG | - | chr4.1:68203328-68203347 | None:intergenic | 60.0% | |
| GGAGGAAGGAGAGGATGTGG+CGG | - | chr4.1:68202113-68202132 | None:intergenic | 60.0% | |
| GGGAGATGAGGGGGGTTGTT+TGG | - | chr4.1:68202152-68202171 | None:intergenic | 60.0% | |
| ! | AAGTGAGGAGTGCGAGTGGG+AGG | - | chr4.1:68202461-68202480 | None:intergenic | 60.0% |
| ! | GAGCAAGTGAGGAGTGCGAG+TGG | - | chr4.1:68202465-68202484 | None:intergenic | 60.0% |
| ! | GGAGAGGATGTGGCGGAGTA+AGG | - | chr4.1:68202106-68202125 | None:intergenic | 60.0% |
| GCCACGTTGCGACCCCATAG+TGG | + | chr4.1:68203263-68203282 | MS.gene067703:intron | 65.0% | |
| GCCACTATGGGGTCGCAACG+TGG | - | chr4.1:68203267-68203286 | None:intergenic | 65.0% | |
| GCTGCAGCAACCGGAGGAGT+GGG | + | chr4.1:68204701-68204720 | MS.gene067703:CDS | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | - | chr4.1:68202893-68202912 | None:intergenic | 65.0% | |
| TGCTGCAGCAACCGGAGGAG+TGG | + | chr4.1:68204700-68204719 | MS.gene067703:CDS | 65.0% | |
| GCAGCAACCGGAGGAGTGGG+TGG | + | chr4.1:68204704-68204723 | MS.gene067703:CDS | 70.0% | |
| GGGGTCGCAACGTGGCACGA+TGG | - | chr4.1:68203259-68203278 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 68202045 | 68204782 | 68202045 | ID=MS.gene067703 |
| chr4.1 | mRNA | 68202045 | 68204782 | 68202045 | ID=MS.gene067703.t1;Parent=MS.gene067703 |
| chr4.1 | exon | 68202045 | 68202502 | 68202045 | ID=MS.gene067703.t1.exon1;Parent=MS.gene067703.t1 |
| chr4.1 | CDS | 68202045 | 68202502 | 68202045 | ID=cds.MS.gene067703.t1;Parent=MS.gene067703.t1 |
| chr4.1 | exon | 68203967 | 68204120 | 68203967 | ID=MS.gene067703.t1.exon2;Parent=MS.gene067703.t1 |
| chr4.1 | CDS | 68203967 | 68204120 | 68203967 | ID=cds.MS.gene067703.t1;Parent=MS.gene067703.t1 |
| chr4.1 | exon | 68204216 | 68204365 | 68204216 | ID=MS.gene067703.t1.exon3;Parent=MS.gene067703.t1 |
| chr4.1 | CDS | 68204216 | 68204365 | 68204216 | ID=cds.MS.gene067703.t1;Parent=MS.gene067703.t1 |
| chr4.1 | exon | 68204450 | 68204782 | 68204450 | ID=MS.gene067703.t1.exon4;Parent=MS.gene067703.t1 |
| chr4.1 | CDS | 68204450 | 68204782 | 68204450 | ID=cds.MS.gene067703.t1;Parent=MS.gene067703.t1 |
| Gene Sequence |
| Protein sequence |