Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06819.t1 | XP_003602382.1 | 99.1 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 7.10E-63 | 249.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06819.t1 | Q94C60 | 80.0 | 115 | 23 | 0 | 1 | 115 | 1 | 115 | 5.7e-53 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06819.t1 | G7J900 | 99.1 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 5.1e-63 | 249.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06819 | MS.gene42075 | PPI |
| MS.gene06819 | MS.gene82237 | PPI |
| MS.gene06819 | MS.gene77045 | PPI |
| MS.gene76728 | MS.gene06819 | PPI |
| MS.gene06819 | MS.gene48819 | PPI |
| MS.gene06606 | MS.gene06819 | PPI |
| MS.gene87743 | MS.gene06819 | PPI |
| MS.gene06819 | MS.gene013499 | PPI |
| MS.gene057248 | MS.gene06819 | PPI |
| MS.gene87064 | MS.gene06819 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06819.t1 | MTR_3g092730 | 99.138 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 7.37e-86 | 245 |
| MS.gene06819.t1 | MTR_3g092770 | 99.138 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 7.37e-86 | 245 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06819.t1 | AT5G63670 | 80.000 | 115 | 23 | 0 | 1 | 115 | 1 | 115 | 2.36e-69 | 203 |
| MS.gene06819.t1 | AT5G08565 | 77.391 | 115 | 26 | 0 | 1 | 115 | 1 | 115 | 4.94e-66 | 195 |
| MS.gene06819.t1 | AT5G08565 | 66.087 | 115 | 39 | 0 | 1 | 115 | 1 | 115 | 1.25e-51 | 159 |
| MS.gene06819.t1 | AT5G63670 | 87.342 | 79 | 10 | 0 | 1 | 79 | 1 | 79 | 1.27e-49 | 153 |
Find 29 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGACAAACCCATTAAAAT+TGG | 0.225325 | 3.1:-74776510 | None:intergenic |
| GAACGTTTGGGAAGCGTATA+TGG | 0.267594 | 3.1:-74779728 | None:intergenic |
| TTACTTGTTTCACGAACGTT+TGG | 0.361888 | 3.1:-74779741 | None:intergenic |
| TTTCAGGATCATTTCTGTAA+TGG | 0.372050 | 3.1:+74776610 | MS.gene06819:intron |
| GGTTTGCAGTTTAGGGAGTC+AGG | 0.390331 | 3.1:+74776422 | MS.gene06819:intron |
| AATTCATGTCCAAAGCTTGT+AGG | 0.398605 | 3.1:-74776018 | None:intergenic |
| GCTCAAATTCCTACAAGCTT+TGG | 0.399271 | 3.1:+74776009 | MS.gene06819:CDS |
| AGGACAAACCCATTAAAATT+GGG | 0.418798 | 3.1:-74776509 | None:intergenic |
| TAATGGATCCAACTCGAAGC+TGG | 0.437009 | 3.1:+74776627 | MS.gene06819:CDS |
| CATACCAACGCGCAACCAAC+GGG | 0.439614 | 3.1:-74776654 | None:intergenic |
| GTTGCAGGAAAATTTGTTCC+TGG | 0.441087 | 3.1:+74779011 | MS.gene06819:intron |
| CTCGAAGCTGGGCCGCCCGT+TGG | 0.457054 | 3.1:+74776639 | MS.gene06819:CDS |
| AAGCTTTGGACATGAATTGA+GGG | 0.465856 | 3.1:+74776023 | MS.gene06819:CDS |
| ATACAAACCTGCATATCGTC+TGG | 0.468215 | 3.1:-74779065 | None:intergenic |
| TACTTGTTTCACGAACGTTT+GGG | 0.492974 | 3.1:-74779740 | None:intergenic |
| GGCTCTTCCAGACGATATGC+AGG | 0.493041 | 3.1:+74779058 | MS.gene06819:CDS |
| CAAGCTTTGGACATGAATTG+AGG | 0.494858 | 3.1:+74776022 | MS.gene06819:CDS |
| CCTTGTCAAAACCTACGATC+AGG | 0.523824 | 3.1:+74776062 | MS.gene06819:CDS |
| GCCGCCCGTTGGTTGCGCGT+TGG | 0.539318 | 3.1:+74776650 | MS.gene06819:CDS |
| CGGGCGGCCCAGCTTCGAGT+TGG | 0.547586 | 3.1:-74776635 | None:intergenic |
| ACATACCAACGCGCAACCAA+CGG | 0.564887 | 3.1:-74776655 | None:intergenic |
| AATGGATCCAACTCGAAGCT+GGG | 0.572441 | 3.1:+74776628 | MS.gene06819:CDS |
| GGACAAACCCATTAAAATTG+GGG | 0.590799 | 3.1:-74776508 | None:intergenic |
| AAGCTTGTAGGAATTTGAGC+AGG | 0.591537 | 3.1:-74776006 | None:intergenic |
| TTACACTCTTGCTGTCTCAG+AGG | 0.600043 | 3.1:+74779037 | MS.gene06819:CDS |
| ACCAACGCGCAACCAACGGG+CGG | 0.605443 | 3.1:-74776651 | None:intergenic |
| GGTCAGTAAGACCTGATCGT+AGG | 0.658939 | 3.1:-74776073 | None:intergenic |
| ACAGCAAGAGTGTAAACACC+AGG | 0.664978 | 3.1:-74779029 | None:intergenic |
| GACAAACCCATTAAAATTGG+GGG | 0.696118 | 3.1:-74776507 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATTATAATAATGTAAA+GGG | - | chr3.1:74776742-74776761 | None:intergenic | 10.0% |
| !! | ATAAGTATTATTCAATGTTT+AGG | - | chr3.1:74777226-74777245 | None:intergenic | 15.0% |
| !! | CTATCATTATAATAATGTAA+AGG | - | chr3.1:74776743-74776762 | None:intergenic | 15.0% |
| !! | TTTCAAAATTCAAATTTAAC+TGG | - | chr3.1:74778646-74778665 | None:intergenic | 15.0% |
| !!! | AAAATTACTTTTTGTGTATT+AGG | - | chr3.1:74779577-74779596 | None:intergenic | 15.0% |
| !!! | ACTATTTTTAGTATATTTAG+GGG | + | chr3.1:74776109-74776128 | MS.gene06819:intron | 15.0% |
| !!! | ATTTGACTTTAGTTTTTTTT+TGG | + | chr3.1:74779229-74779248 | MS.gene06819:intron | 15.0% |
| !!! | CACTATTTTTAGTATATTTA+GGG | + | chr3.1:74776108-74776127 | MS.gene06819:intron | 15.0% |
| !!! | TAATACTTATATTTTGTCTA+TGG | + | chr3.1:74777236-74777255 | MS.gene06819:intron | 15.0% |
| !!! | TCACTATTTTTAGTATATTT+AGG | + | chr3.1:74776107-74776126 | MS.gene06819:intron | 15.0% |
| !!! | TTTATTTTCTTTTAAAAGTC+TGG | + | chr3.1:74777843-74777862 | MS.gene06819:intron | 15.0% |
| !!! | TTTGACTTTAGTTTTTTTTT+GGG | + | chr3.1:74779230-74779249 | MS.gene06819:intron | 15.0% |
| !! | ACCTTTCTTTATAACAAAAA+AGG | - | chr3.1:74778703-74778722 | None:intergenic | 20.0% |
| !! | AGAATTGATTATGACATTAT+TGG | + | chr3.1:74776154-74776173 | MS.gene06819:intron | 20.0% |
| !! | CTAACAAAAATTAAGTTATG+TGG | + | chr3.1:74777131-74777150 | MS.gene06819:intron | 20.0% |
| !! | TATAGTACTGTTTAATGTTT+AGG | + | chr3.1:74777713-74777732 | MS.gene06819:intron | 20.0% |
| !!! | ATAAACTAATGATCTAAGAT+AGG | - | chr3.1:74778288-74778307 | None:intergenic | 20.0% |
| !!! | ATTCTGTAAAATTTTGATTC+TGG | - | chr3.1:74776321-74776340 | None:intergenic | 20.0% |
| !!! | CTTTTATCCATTAATTTAAC+TGG | + | chr3.1:74779274-74779293 | MS.gene06819:intron | 20.0% |
| !!! | GAAGAGTACAAAATTTAATT+AGG | - | chr3.1:74777272-74777291 | None:intergenic | 20.0% |
| !!! | GTTATACAATGTTTTGATTA+TGG | + | chr3.1:74778481-74778500 | MS.gene06819:intron | 20.0% |
| !!! | TCCTTTTTTGTTATAAAGAA+AGG | + | chr3.1:74778699-74778718 | MS.gene06819:intron | 20.0% |
| !!! | TCTAAAATAGAAAAACTAGA+CGG | - | chr3.1:74778921-74778940 | None:intergenic | 20.0% |
| !!! | TTATTCTTTTTCTTTTGCAA+AGG | + | chr3.1:74779320-74779339 | MS.gene06819:intron | 20.0% |
| !!! | TTGACTTTAGTTTTTTTTTG+GGG | + | chr3.1:74779231-74779250 | MS.gene06819:intron | 20.0% |
| ! | AAACAAAATCTGTGTATGTT+TGG | - | chr3.1:74776373-74776392 | None:intergenic | 25.0% |
| ! | AATAAGATGATACAAGAGAA+AGG | - | chr3.1:74779609-74779628 | None:intergenic | 25.0% |
| ! | ACACATGTAATACATAGATT+TGG | - | chr3.1:74777581-74777600 | None:intergenic | 25.0% |
| ! | ACACATGTAATCCATAAATT+TGG | - | chr3.1:74777008-74777027 | None:intergenic | 25.0% |
| ! | ACTAAAAATAGTGAGAGAAA+GGG | - | chr3.1:74776101-74776120 | None:intergenic | 25.0% |
| ! | AGAACAATATGGAAAATTAC+TGG | - | chr3.1:74778217-74778236 | None:intergenic | 25.0% |
| ! | ATTCGTATATGCTTCTTATA+AGG | - | chr3.1:74777411-74777430 | None:intergenic | 25.0% |
| ! | GAAATCTCTAGTACTTATTA+TGG | + | chr3.1:74778254-74778273 | MS.gene06819:intron | 25.0% |
| ! | GTGATTTCATGTTAGAATTT+GGG | - | chr3.1:74778367-74778386 | None:intergenic | 25.0% |
| ! | TACTAAAAATAGTGAGAGAA+AGG | - | chr3.1:74776102-74776121 | None:intergenic | 25.0% |
| ! | TATCCATTAATTTAACTGGT+CGG | + | chr3.1:74779278-74779297 | MS.gene06819:intron | 25.0% |
| ! | TGATGTAAATAGATATGACA+AGG | - | chr3.1:74776532-74776551 | None:intergenic | 25.0% |
| ! | TGTGATTTCATGTTAGAATT+TGG | - | chr3.1:74778368-74778387 | None:intergenic | 25.0% |
| ! | TTTGCCAATAATGTCTAATA+AGG | + | chr3.1:74778397-74778416 | MS.gene06819:intron | 25.0% |
| !! | AAACTGGTAATGTAATTTAG+TGG | + | chr3.1:74778748-74778767 | MS.gene06819:intron | 25.0% |
| !! | AACTGGTAATGTAATTTAGT+GGG | + | chr3.1:74778749-74778768 | MS.gene06819:intron | 25.0% |
| !! | AAGTTTTTCTTATATGTTGC+AGG | + | chr3.1:74778996-74779015 | MS.gene06819:intron | 25.0% |
| !! | AATTTTGTATTCCTCTTTCT+AGG | - | chr3.1:74777661-74777680 | None:intergenic | 25.0% |
| !! | ACCTACATCTAAAATGTTTA+AGG | - | chr3.1:74778463-74778482 | None:intergenic | 25.0% |
| !! | TCCTTAAACATTTTAGATGT+AGG | + | chr3.1:74778459-74778478 | MS.gene06819:intron | 25.0% |
| !!! | AATGTTTTGATTATGGAAGA+TGG | + | chr3.1:74778488-74778507 | MS.gene06819:intron | 25.0% |
| !!! | AATTATTGTTTTTGAGAGAG+TGG | - | chr3.1:74779212-74779231 | None:intergenic | 25.0% |
| !!! | ACTTTAGAATCAGATACAAA+TGG | + | chr3.1:74776855-74776874 | MS.gene06819:intron | 25.0% |
| !!! | ATGTTTTGATTATGGAAGAT+GGG | + | chr3.1:74778489-74778508 | MS.gene06819:intron | 25.0% |
| !!! | ATTACCAGTTTTTAATTCAG+AGG | - | chr3.1:74778739-74778758 | None:intergenic | 25.0% |
| !!! | ATTTTGATTCTGGTTAAAAG+TGG | - | chr3.1:74776311-74776330 | None:intergenic | 25.0% |
| !!! | CTTTAGAATCAGATACAAAT+GGG | + | chr3.1:74776856-74776875 | MS.gene06819:intron | 25.0% |
| !!! | GCAAAGGTGTTAAAAATTTA+GGG | + | chr3.1:74779336-74779355 | MS.gene06819:intron | 25.0% |
| !!! | TCTTCATCAATTTGATTTTC+AGG | + | chr3.1:74776594-74776613 | MS.gene06819:intron | 25.0% |
| !!! | TGACTTTAGTTTTTTTTTGG+GGG | + | chr3.1:74779232-74779251 | MS.gene06819:intron | 25.0% |
| !!! | TGCAAAGGTGTTAAAAATTT+AGG | + | chr3.1:74779335-74779354 | MS.gene06819:intron | 25.0% |
| !!! | TTTCAACCTTTTGGTTAAAA+GGG | + | chr3.1:74777051-74777070 | MS.gene06819:intron | 25.0% |
| !!! | TTTTGATTCTGGTTAAAAGT+GGG | - | chr3.1:74776310-74776329 | None:intergenic | 25.0% |
| AAAGAAAACTGAAAGGCAAT+GGG | - | chr3.1:74776719-74776738 | None:intergenic | 30.0% | |
| AAGGACAAACCCATTAAAAT+TGG | - | chr3.1:74776513-74776532 | None:intergenic | 30.0% | |
| AGGACAAACCCATTAAAATT+GGG | - | chr3.1:74776512-74776531 | None:intergenic | 30.0% | |
| AGTACCTCTGAATTAAAAAC+TGG | + | chr3.1:74778732-74778751 | MS.gene06819:intron | 30.0% | |
| ATTGAAAATCTCAACTCACA+AGG | - | chr3.1:74779403-74779422 | None:intergenic | 30.0% | |
| CACAAATAGAAAAACAGAGA+CGG | - | chr3.1:74778158-74778177 | None:intergenic | 30.0% | |
| CCAATAATGTCTAATAAGGA+AGG | + | chr3.1:74778401-74778420 | MS.gene06819:intron | 30.0% | |
| CCTTCCTTATTAGACATTAT+TGG | - | chr3.1:74778404-74778423 | None:intergenic | 30.0% | |
| CTGGTCGGATATAAAATATT+TGG | + | chr3.1:74779293-74779312 | MS.gene06819:intron | 30.0% | |
| CTTCTTCCATCTGTAAAAAT+GGG | - | chr3.1:74776460-74776479 | None:intergenic | 30.0% | |
| GATAGTAAGTTCAGATTGTT+GGG | + | chr3.1:74778548-74778567 | MS.gene06819:intron | 30.0% | |
| GTAATCCATAAATTTGGTTG+TGG | - | chr3.1:74777002-74777021 | None:intergenic | 30.0% | |
| GTATTACATGTGTTGAGTTA+TGG | + | chr3.1:74777588-74777607 | MS.gene06819:intron | 30.0% | |
| TAAAGGGAAAGAAAACTGAA+AGG | - | chr3.1:74776726-74776745 | None:intergenic | 30.0% | |
| TACTTGACCATTTAACCAAA+AGG | + | chr3.1:74777307-74777326 | MS.gene06819:intron | 30.0% | |
| TATAAATAATCCCTGTGTTC+TGG | + | chr3.1:74776401-74776420 | MS.gene06819:intron | 30.0% | |
| TATCCGACCAGTTAAATTAA+TGG | - | chr3.1:74779284-74779303 | None:intergenic | 30.0% | |
| TCAAATGCTGTTGAATGAAT+TGG | + | chr3.1:74777447-74777466 | MS.gene06819:intron | 30.0% | |
| TCTTCTTCCATCTGTAAAAA+TGG | - | chr3.1:74776461-74776480 | None:intergenic | 30.0% | |
| TGATAGTAAGTTCAGATTGT+TGG | + | chr3.1:74778547-74778566 | MS.gene06819:intron | 30.0% | |
| TTGATCAAAACGATTTACGA+CGG | - | chr3.1:74778011-74778030 | None:intergenic | 30.0% | |
| TTTCAGGATCATTTCTGTAA+TGG | + | chr3.1:74776610-74776629 | MS.gene06819:intron | 30.0% | |
| TTTGGTTAAATGGTCAAGTA+AGG | - | chr3.1:74777307-74777326 | None:intergenic | 30.0% | |
| ! | AAGTTATGGATTACATGTGT+TGG | - | chr3.1:74776791-74776810 | None:intergenic | 30.0% |
| ! | AATTTTGCATTCCTCTTTCT+AGG | - | chr3.1:74777089-74777108 | None:intergenic | 30.0% |
| ! | AGGAGTATATAACCATTTAG+TGG | + | chr3.1:74778421-74778440 | MS.gene06819:intron | 30.0% |
| ! | ATTTTCAATAAATGCCCAAG+TGG | + | chr3.1:74779414-74779433 | MS.gene06819:intron | 30.0% |
| ! | GTAATACATAGATTTGGTTG+TGG | - | chr3.1:74777575-74777594 | None:intergenic | 30.0% |
| ! | TAGTATGTTGTTTACACTCA+TGG | - | chr3.1:74777199-74777218 | None:intergenic | 30.0% |
| !! | GTTTCAACCTTTTGGTTAAA+AGG | + | chr3.1:74777050-74777069 | MS.gene06819:intron | 30.0% |
| !! | GTTTCTACCTTTTGGTTAAA+TGG | - | chr3.1:74777317-74777336 | None:intergenic | 30.0% |
| !! | TAATTCAGAGGTACTAATAC+AGG | - | chr3.1:74778727-74778746 | None:intergenic | 30.0% |
| !!! | GACTTTAGTTTTTTTTTGGG+GGG | + | chr3.1:74779233-74779252 | MS.gene06819:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | chr3.1:74778336-74778355 | MS.gene06819:intron | 30.0% |
| AAAATAGTGAGAGAAAGGGA+AGG | - | chr3.1:74776097-74776116 | None:intergenic | 35.0% | |
| AAATGGGAGACAACATTATG+TGG | + | chr3.1:74776872-74776891 | MS.gene06819:intron | 35.0% | |
| AATTCATGTCCAAAGCTTGT+AGG | - | chr3.1:74776021-74776040 | None:intergenic | 35.0% | |
| ACTAGAGATTTCTGCCATTA+AGG | - | chr3.1:74778246-74778265 | None:intergenic | 35.0% | |
| AGAAGCTTCAAAGGTGATTA+GGG | - | chr3.1:74776558-74776577 | None:intergenic | 35.0% | |
| AGACAATCTTAAGACTGCAA+GGG | - | chr3.1:74778183-74778202 | None:intergenic | 35.0% | |
| AGAGAGTGGCATAAAAAAAG+AGG | - | chr3.1:74779198-74779217 | None:intergenic | 35.0% | |
| AGCTTCAAGTGAATCAATTC+TGG | - | chr3.1:74776206-74776225 | None:intergenic | 35.0% | |
| ATGACATTCAGAAGCTTCAA+AGG | - | chr3.1:74776567-74776586 | None:intergenic | 35.0% | |
| ATTATGGAAGATGGGCATAA+AGG | + | chr3.1:74778497-74778516 | MS.gene06819:intron | 35.0% | |
| ATTGTTCTCATCGTCCTTAA+TGG | + | chr3.1:74778229-74778248 | MS.gene06819:intron | 35.0% | |
| CAATCTGAACTTACTATCAC+AGG | - | chr3.1:74778546-74778565 | None:intergenic | 35.0% | |
| CACAAATGAAAATTCTCTCC+AGG | - | chr3.1:74778799-74778818 | None:intergenic | 35.0% | |
| CTAAAGTAGTGCATCTACTA+TGG | - | chr3.1:74776842-74776861 | None:intergenic | 35.0% | |
| CTCAACCACAACCAAATTTA+TGG | + | chr3.1:74776994-74777013 | MS.gene06819:intron | 35.0% | |
| CTCACAAATAGCCTGAAAAT+GGG | - | chr3.1:74779696-74779715 | None:intergenic | 35.0% | |
| GAAAGAAAACTGAAAGGCAA+TGG | - | chr3.1:74776720-74776739 | None:intergenic | 35.0% | |
| GACAAACCCATTAAAATTGG+GGG | - | chr3.1:74776510-74776529 | None:intergenic | 35.0% | |
| GATTACATGTGTTGGAGTTA+TGG | - | chr3.1:74777352-74777371 | None:intergenic | 35.0% | |
| GCATTCACATCTTCTTGTTA+TGG | + | chr3.1:74777516-74777535 | MS.gene06819:intron | 35.0% | |
| GGACAAACCCATTAAAATTG+GGG | - | chr3.1:74776511-74776530 | None:intergenic | 35.0% | |
| GTAATCCATAACTTCGACTA+TGG | + | chr3.1:74776797-74776816 | MS.gene06819:intron | 35.0% | |
| GTAATCCATAACTTCGATTG+TGG | + | chr3.1:74777366-74777385 | MS.gene06819:intron | 35.0% | |
| GTGATTACCAATTCGTACAA+CGG | - | chr3.1:74776902-74776921 | None:intergenic | 35.0% | |
| TAAGGACGATGAGAACAATA+TGG | - | chr3.1:74778228-74778247 | None:intergenic | 35.0% | |
| TAGTACATTCTATACTCTCG+CGG | + | chr3.1:74777740-74777759 | MS.gene06819:intron | 35.0% | |
| TCTCTCATTCACATCTACTA+TGG | + | chr3.1:74776957-74776976 | MS.gene06819:intron | 35.0% | |
| TGGTTAAAAGGGTTCAAGTA+AGG | + | chr3.1:74777062-74777081 | MS.gene06819:intron | 35.0% | |
| TGTCAGATACAACCACTAAA+TGG | - | chr3.1:74778436-74778455 | None:intergenic | 35.0% | |
| TTATGGAAGATGGGCATAAA+GGG | + | chr3.1:74778498-74778517 | MS.gene06819:intron | 35.0% | |
| TTCAACCATAGTCGAAGTTA+TGG | - | chr3.1:74776805-74776824 | None:intergenic | 35.0% | |
| ! | AAGGTGAAGTGATTTGTGTT+TGG | - | chr3.1:74776285-74776304 | None:intergenic | 35.0% |
| ! | CTTGAACCCTTTTAACCAAA+AGG | - | chr3.1:74777060-74777079 | None:intergenic | 35.0% |
| ! | GAAGTGATTTGTGTTTGGAT+AGG | - | chr3.1:74776280-74776299 | None:intergenic | 35.0% |
| ! | GTTCTGTAGTTTCTACCTTT+TGG | - | chr3.1:74777325-74777344 | None:intergenic | 35.0% |
| ! | TAACAATCCGTCAGACTTTT+CGG | + | chr3.1:74777968-74777987 | MS.gene06819:intron | 35.0% |
| !! | AAAAGTCTGACGGATTGTTA+TGG | - | chr3.1:74777968-74777987 | None:intergenic | 35.0% |
| !! | AAGCTTTGGACATGAATTGA+GGG | + | chr3.1:74776023-74776042 | MS.gene06819:CDS | 35.0% |
| !! | AGTTTCAACCTTTTGGTTAG+AGG | + | chr3.1:74777622-74777641 | MS.gene06819:intron | 35.0% |
| !! | GTTTCAACCTTTTGGTTAGA+GGG | + | chr3.1:74777623-74777642 | MS.gene06819:intron | 35.0% |
| !! | TTAGGGGACATTATTGATTC+TGG | + | chr3.1:74776125-74776144 | MS.gene06819:intron | 35.0% |
| !! | TTCTGGTTAAAAGTGGGTTA+AGG | - | chr3.1:74776304-74776323 | None:intergenic | 35.0% |
| AAACCCATTAAAATTGGGGG+TGG | - | chr3.1:74776507-74776526 | None:intergenic | 40.0% | |
| AAACTGCAAACCAGAACACA+GGG | - | chr3.1:74776414-74776433 | None:intergenic | 40.0% | |
| AAGCTTGTAGGAATTTGAGC+AGG | - | chr3.1:74776009-74776028 | None:intergenic | 40.0% | |
| AATCTCAACTCACAAGGCAA+CGG | - | chr3.1:74779397-74779416 | None:intergenic | 40.0% | |
| ACCAAAAGGTTGAAACTGCA+AGG | - | chr3.1:74777046-74777065 | None:intergenic | 40.0% | |
| ACTATTGTGTGATTGACACC+TGG | + | chr3.1:74778778-74778797 | MS.gene06819:intron | 40.0% | |
| ACTTGAACCCTCTAACCAAA+AGG | - | chr3.1:74777633-74777652 | None:intergenic | 40.0% | |
| AGACAAACGACCTCAAAAAC+AGG | - | chr3.1:74778074-74778093 | None:intergenic | 40.0% | |
| AGACAATGAGTGAAGAGCAA+GGG | - | chr3.1:74778128-74778147 | None:intergenic | 40.0% | |
| AGCAAAGAGATGGATAGAAG+AGG | + | chr3.1:74778602-74778621 | MS.gene06819:intron | 40.0% | |
| ATACAAACCTGCATATCGTC+TGG | - | chr3.1:74779068-74779087 | None:intergenic | 40.0% | |
| CAGAAGCTTCAAAGGTGATT+AGG | - | chr3.1:74776559-74776578 | None:intergenic | 40.0% | |
| CAGACAATCTTAAGACTGCA+AGG | - | chr3.1:74778184-74778203 | None:intergenic | 40.0% | |
| CCAAAAGGTTGAAACTGCAA+GGG | - | chr3.1:74777045-74777064 | None:intergenic | 40.0% | |
| CCTCACAAATAGCCTGAAAA+TGG | - | chr3.1:74779697-74779716 | None:intergenic | 40.0% | |
| CTCAACCACAATCGAAGTTA+TGG | - | chr3.1:74777374-74777393 | None:intergenic | 40.0% | |
| CTTGCAGTCTTAAGATTGTC+TGG | + | chr3.1:74778182-74778201 | MS.gene06819:intron | 40.0% | |
| GCCAAACAGTATAACCACTT+GGG | - | chr3.1:74779431-74779450 | None:intergenic | 40.0% | |
| GCTCAAATTCCTACAAGCTT+TGG | + | chr3.1:74776009-74776028 | MS.gene06819:CDS | 40.0% | |
| GTGGTTATACTGTTTGGCAA+TGG | + | chr3.1:74779433-74779452 | MS.gene06819:intron | 40.0% | |
| TAAACTGCAAACCAGAACAC+AGG | - | chr3.1:74776415-74776434 | None:intergenic | 40.0% | |
| TAGATGTGAATGAGAGACAG+CGG | - | chr3.1:74776954-74776973 | None:intergenic | 40.0% | |
| TCAAGATCGTATTCAGAGCT+TGG | + | chr3.1:74777803-74777822 | MS.gene06819:intron | 40.0% | |
| TCAAGTAAGGTCCTAGAAAG+AGG | + | chr3.1:74777075-74777094 | MS.gene06819:intron | 40.0% | |
| TGCCAAACAGTATAACCACT+TGG | - | chr3.1:74779432-74779451 | None:intergenic | 40.0% | |
| TGGCAATGGCAACTAAGATT+AGG | + | chr3.1:74779447-74779466 | MS.gene06819:intron | 40.0% | |
| TTGGTTAGAGGGTTCAAGTA+AGG | + | chr3.1:74777634-74777653 | MS.gene06819:intron | 40.0% | |
| TTTGTACTCTTCCTCCTTCT+TGG | + | chr3.1:74777280-74777299 | MS.gene06819:intron | 40.0% | |
| ! | AAAACTAGCCTGTAAGGTGA+GGG | - | chr3.1:74778323-74778342 | None:intergenic | 40.0% |
| ! | AATGGATAAAAGCACAGCCT+AGG | - | chr3.1:74779266-74779285 | None:intergenic | 40.0% |
| ! | ACCTCAAAAACAGGTTGAAG+AGG | - | chr3.1:74778065-74778084 | None:intergenic | 40.0% |
| ! | ATGGATAAAAGCACAGCCTA+GGG | - | chr3.1:74779265-74779284 | None:intergenic | 40.0% |
| ! | CCTTACAAAACTAGCCTGTA+AGG | - | chr3.1:74778329-74778348 | None:intergenic | 40.0% |
| ! | GCTTTGCAGTTTCAACCTTT+TGG | + | chr3.1:74777615-74777634 | MS.gene06819:intron | 40.0% |
| ! | GGATTACATGTGTTGAGTTG+TGG | + | chr3.1:74777015-74777034 | MS.gene06819:intron | 40.0% |
| ! | GTTGCAGGAAAATTTGTTCC+TGG | + | chr3.1:74779011-74779030 | MS.gene06819:intron | 40.0% |
| ! | GTTGTGGTTGAGTTGCAATT+TGG | - | chr3.1:74776986-74777005 | None:intergenic | 40.0% |
| ! | TTGCGTATATGCCCATTTTC+AGG | + | chr3.1:74779682-74779701 | MS.gene06819:intron | 40.0% |
| !! | CAAGCTTTGGACATGAATTG+AGG | + | chr3.1:74776022-74776041 | MS.gene06819:CDS | 40.0% |
| !! | CCATTTTCAGGCTATTTGTG+AGG | + | chr3.1:74779694-74779713 | MS.gene06819:intron | 40.0% |
| !! | GAACTGCCCATTTTTACAGA+TGG | + | chr3.1:74776451-74776470 | MS.gene06819:CDS | 40.0% |
| !! | GTGTTCTGGTTTGCAGTTTA+GGG | + | chr3.1:74776415-74776434 | MS.gene06819:intron | 40.0% |
| !! | TGTGTTCTGGTTTGCAGTTT+AGG | + | chr3.1:74776414-74776433 | MS.gene06819:intron | 40.0% |
| !!! | CCTTACAGGCTAGTTTTGTA+AGG | + | chr3.1:74778326-74778345 | MS.gene06819:intron | 40.0% |
| AAACGATTTACGACGGCAAG+TGG | - | chr3.1:74778004-74778023 | None:intergenic | 45.0% | |
| AATGGATCCAACTCGAAGCT+GGG | + | chr3.1:74776628-74776647 | MS.gene06819:CDS | 45.0% | |
| ATACGTGCCGAAAAGTCTGA+CGG | - | chr3.1:74777978-74777997 | None:intergenic | 45.0% | |
| ATGGTGAGTGGGAAATTCTC+CGG | - | chr3.1:74777949-74777968 | None:intergenic | 45.0% | |
| CAGACAATGAGTGAAGAGCA+AGG | - | chr3.1:74778129-74778148 | None:intergenic | 45.0% | |
| CCACACATGTCTACTGTAGA+GGG | - | chr3.1:74777876-74777895 | None:intergenic | 45.0% | |
| CCTTGTCAAAACCTACGATC+AGG | + | chr3.1:74776062-74776081 | MS.gene06819:CDS | 45.0% | |
| GAATGCGAGACAACAGTATG+TGG | - | chr3.1:74777502-74777521 | None:intergenic | 45.0% | |
| GCCCAAGTGGTTATACTGTT+TGG | + | chr3.1:74779427-74779446 | MS.gene06819:intron | 45.0% | |
| TCAAGTAAGGTCCAAGAAGG+AGG | - | chr3.1:74777294-74777313 | None:intergenic | 45.0% | |
| TCTACAGTAGACATGTGTGG+CGG | + | chr3.1:74777876-74777895 | MS.gene06819:intron | 45.0% | |
| TCTTGCACACAACTGAGATG+TGG | + | chr3.1:74778967-74778986 | MS.gene06819:intron | 45.0% | |
| TGGAATGCCGTTGTACGAAT+TGG | + | chr3.1:74776892-74776911 | MS.gene06819:intron | 45.0% | |
| TGGTCAAGTAAGGTCCAAGA+AGG | - | chr3.1:74777297-74777316 | None:intergenic | 45.0% | |
| ! | AAACTAGCCTGTAAGGTGAG+GGG | - | chr3.1:74778322-74778341 | None:intergenic | 45.0% |
| ! | ACAGCAAGAGTGTAAACACC+AGG | - | chr3.1:74779032-74779051 | None:intergenic | 45.0% |
| ! | CAAAACTAGCCTGTAAGGTG+AGG | - | chr3.1:74778324-74778343 | None:intergenic | 45.0% |
| ! | CCCTTGCAGTTTCAACCTTT+TGG | + | chr3.1:74777042-74777061 | MS.gene06819:intron | 45.0% |
| ! | GAACGTTTGGGAAGCGTATA+TGG | - | chr3.1:74779731-74779750 | None:intergenic | 45.0% |
| ! | TAATGGATCCAACTCGAAGC+TGG | + | chr3.1:74776627-74776646 | MS.gene06819:CDS | 45.0% |
| ! | TCAGACTTTTCGGCACGTAT+AGG | + | chr3.1:74777978-74777997 | MS.gene06819:intron | 45.0% |
| ! | TGCACCACCCCCAATTTTAA+TGG | + | chr3.1:74776500-74776519 | MS.gene06819:CDS | 45.0% |
| ! | TGGATAAAAGCACAGCCTAG+GGG | - | chr3.1:74779264-74779283 | None:intergenic | 45.0% |
| ! | TTACACTCTTGCTGTCTCAG+AGG | + | chr3.1:74779037-74779056 | MS.gene06819:CDS | 45.0% |
| !! | CCTGATCGTAGGTTTTGACA+AGG | - | chr3.1:74776065-74776084 | None:intergenic | 45.0% |
| !! | CGTTTTGATCAAGAAGCCGT+CGG | + | chr3.1:74778019-74778038 | MS.gene06819:intron | 45.0% |
| !! | GACGGATTGTTATGGTGAGT+GGG | - | chr3.1:74777960-74777979 | None:intergenic | 45.0% |
| !! | GATCGTAGGTTTTGACAAGG+CGG | - | chr3.1:74776062-74776081 | None:intergenic | 45.0% |
| !! | GCACCACCCCCAATTTTAAT+GGG | + | chr3.1:74776501-74776520 | MS.gene06819:CDS | 45.0% |
| !! | GGGGACATTATTGATTCTGG+AGG | + | chr3.1:74776128-74776147 | MS.gene06819:intron | 45.0% |
| !! | TAGGGAAGCTCTAAACACAC+AGG | + | chr3.1:74779354-74779373 | MS.gene06819:intron | 45.0% |
| !! | TGACGGATTGTTATGGTGAG+TGG | - | chr3.1:74777961-74777980 | None:intergenic | 45.0% |
| !!! | GCCTCTTCAACCTGTTTTTG+AGG | + | chr3.1:74778061-74778080 | MS.gene06819:intron | 45.0% |
| ACATACCAACGCGCAACCAA+CGG | - | chr3.1:74776658-74776677 | None:intergenic | 50.0% | |
| AGTGAAGAGCAAGGGTTTGC+TGG | - | chr3.1:74778120-74778139 | None:intergenic | 50.0% | |
| ATGGGCAGAGAGCAAAGAGA+TGG | + | chr3.1:74778592-74778611 | MS.gene06819:intron | 50.0% | |
| CACAAGATGACCTGAACCGA+CGG | - | chr3.1:74778038-74778057 | None:intergenic | 50.0% | |
| CACATGTCTACTGTAGAGGG+TGG | - | chr3.1:74777873-74777892 | None:intergenic | 50.0% | |
| CCCTCTACAGTAGACATGTG+TGG | + | chr3.1:74777873-74777892 | MS.gene06819:intron | 50.0% | |
| GCCACACATGTCTACTGTAG+AGG | - | chr3.1:74777877-74777896 | None:intergenic | 50.0% | |
| GGTCAGTAAGACCTGATCGT+AGG | - | chr3.1:74776076-74776095 | None:intergenic | 50.0% | |
| GGTTTGCAGTTTAGGGAGTC+AGG | + | chr3.1:74776422-74776441 | MS.gene06819:intron | 50.0% | |
| TGAGCAGAGGAGTGAGAGAT+GGG | + | chr3.1:74778574-74778593 | MS.gene06819:intron | 50.0% | |
| TGGAAGATGGGCATAAAGGG+TGG | + | chr3.1:74778501-74778520 | MS.gene06819:intron | 50.0% | |
| ! | GTCGGTTCAGGTCATCTTGT+GGG | + | chr3.1:74778037-74778056 | MS.gene06819:intron | 50.0% |
| !! | TTTTGGGGGGATTTTCCCCT+AGG | + | chr3.1:74779246-74779265 | MS.gene06819:intron | 50.0% |
| AGTGACACCCCTCACCTTAC+AGG | + | chr3.1:74778312-74778331 | MS.gene06819:intron | 55.0% | |
| CATACCAACGCGCAACCAAC+GGG | - | chr3.1:74776657-74776676 | None:intergenic | 55.0% | |
| CTGAGCAGAGGAGTGAGAGA+TGG | + | chr3.1:74778573-74778592 | MS.gene06819:intron | 55.0% | |
| GGCTCTTCCAGACGATATGC+AGG | + | chr3.1:74779058-74779077 | MS.gene06819:CDS | 55.0% | |
| GGTGGCAGATCAGAGCCTTA+TGG | - | chr3.1:74777910-74777929 | None:intergenic | 55.0% | |
| TCCGGCGACGAAACTTCAGA+GGG | - | chr3.1:74777931-74777950 | None:intergenic | 55.0% | |
| !! | ACCCTCTGAAGTTTCGTCGC+CGG | + | chr3.1:74777927-74777946 | MS.gene06819:intron | 55.0% |
| !! | CGTCGGTTCAGGTCATCTTG+TGG | + | chr3.1:74778036-74778055 | MS.gene06819:intron | 55.0% |
| !! | GATCAAGAAGCCGTCGGTTC+AGG | + | chr3.1:74778025-74778044 | MS.gene06819:intron | 55.0% |
| !! | GATTGTTGGGCACTGAGCAG+AGG | + | chr3.1:74778561-74778580 | MS.gene06819:intron | 55.0% |
| CTCCGGCGACGAAACTTCAG+AGG | - | chr3.1:74777932-74777951 | None:intergenic | 60.0% | |
| GGCGACGAAACTTCAGAGGG+TGG | - | chr3.1:74777928-74777947 | None:intergenic | 60.0% | |
| GTGGCGGCTTCGTCACCATA+AGG | + | chr3.1:74777892-74777911 | MS.gene06819:intron | 60.0% | |
| ACCAACGCGCAACCAACGGG+CGG | - | chr3.1:74776654-74776673 | None:intergenic | 65.0% | |
| CGGGCGGCCCAGCTTCGAGT+TGG | - | chr3.1:74776638-74776657 | None:intergenic | 75.0% | |
| CTCGAAGCTGGGCCGCCCGT+TGG | + | chr3.1:74776639-74776658 | MS.gene06819:CDS | 75.0% | |
| ! | GCCGCCCGTTGGTTGCGCGT+TGG | + | chr3.1:74776650-74776669 | MS.gene06819:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74775994 | 74779754 | 74775994 | ID=MS.gene06819 |
| chr3.1 | mRNA | 74775994 | 74779754 | 74775994 | ID=MS.gene06819.t1;Parent=MS.gene06819 |
| chr3.1 | exon | 74775994 | 74776083 | 74775994 | ID=MS.gene06819.t1.exon1;Parent=MS.gene06819.t1 |
| chr3.1 | CDS | 74775994 | 74776083 | 74775994 | ID=cds.MS.gene06819.t1;Parent=MS.gene06819.t1 |
| chr3.1 | exon | 74776431 | 74776522 | 74776431 | ID=MS.gene06819.t1.exon2;Parent=MS.gene06819.t1 |
| chr3.1 | CDS | 74776431 | 74776522 | 74776431 | ID=cds.MS.gene06819.t1;Parent=MS.gene06819.t1 |
| chr3.1 | exon | 74776616 | 74776671 | 74776616 | ID=MS.gene06819.t1.exon3;Parent=MS.gene06819.t1 |
| chr3.1 | CDS | 74776616 | 74776671 | 74776616 | ID=cds.MS.gene06819.t1;Parent=MS.gene06819.t1 |
| chr3.1 | exon | 74779018 | 74779079 | 74779018 | ID=MS.gene06819.t1.exon4;Parent=MS.gene06819.t1 |
| chr3.1 | CDS | 74779018 | 74779079 | 74779018 | ID=cds.MS.gene06819.t1;Parent=MS.gene06819.t1 |
| chr3.1 | exon | 74779704 | 74779754 | 74779704 | ID=MS.gene06819.t1.exon5;Parent=MS.gene06819.t1 |
| chr3.1 | CDS | 74779704 | 74779754 | 74779704 | ID=cds.MS.gene06819.t1;Parent=MS.gene06819.t1 |
| Gene Sequence |
| Protein sequence |
