AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068376

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068376.t1 MTR_8g027375 97.810 548 12 0 1 548 24 571 0.0 1115
MS.gene068376.t1 MTR_3g462760 47.978 544 264 5 11 548 26 556 0.0 537
MS.gene068376.t1 MTR_5g069680 48.162 544 264 6 11 548 27 558 0.0 533
MS.gene068376.t1 MTR_4g015120 47.523 545 268 6 11 548 24 557 0.0 525
MS.gene068376.t1 MTR_7g062310 45.035 564 285 8 2 548 38 593 7.37e-180 520
MS.gene068376.t1 MTR_5g081810 46.852 540 264 8 17 548 5 529 1.98e-177 511
MS.gene068376.t1 MTR_7g062250 47.027 555 269 10 10 548 33 578 2.49e-176 510
MS.gene068376.t1 MTR_5g083360 45.688 545 284 4 13 548 26 567 1.27e-175 508
MS.gene068376.t1 MTR_4g064530 47.802 546 261 10 1 532 34 569 1.99e-175 508
MS.gene068376.t1 MTR_7g058690 46.499 557 272 9 10 548 32 580 2.08e-175 508
MS.gene068376.t1 MTR_7g060460 46.168 561 279 9 5 548 27 581 5.12e-175 507
MS.gene068376.t1 MTR_5g020620 45.756 542 276 6 13 548 32 561 1.25e-174 505
MS.gene068376.t1 MTR_5g073210 44.526 548 294 6 5 548 19 560 3.25e-174 504
MS.gene068376.t1 MTR_7g458880 44.662 562 285 9 5 548 27 580 9.65e-173 501
MS.gene068376.t1 MTR_5g020600 44.790 547 283 7 9 548 32 566 1.18e-172 500
MS.gene068376.t1 MTR_4g064530 46.768 526 256 10 1 512 34 549 1.85e-160 469
MS.gene068376.t1 MTR_2g008330 42.115 558 306 8 1 548 29 579 7.48e-157 460
MS.gene068376.t1 MTR_7g065970 44.059 547 292 8 13 548 27 570 1.42e-156 459
MS.gene068376.t1 MTR_3g101640 42.652 558 304 9 1 548 20 571 1.61e-152 449
MS.gene068376.t1 MTR_3g101635 44.030 536 284 10 7 533 23 551 2.44e-152 448
MS.gene068376.t1 MTR_4g019225 41.788 548 304 8 13 548 28 572 1.38e-151 446
MS.gene068376.t1 MTR_3g071890 45.291 499 265 5 10 504 32 526 1.17e-148 439
MS.gene068376.t1 MTR_7g065980 42.096 563 301 10 1 548 19 571 1.98e-148 438
MS.gene068376.t1 MTR_8g091390 31.139 562 335 14 11 548 34 567 2.00e-71 239
MS.gene068376.t1 MTR_3g078740 29.840 563 335 18 7 526 22 567 2.15e-64 221
MS.gene068376.t1 MTR_3g078700 30.129 541 315 20 5 526 22 518 1.40e-56 198
MS.gene068376.t1 MTR_3g078730 29.887 532 318 17 11 526 25 517 7.30e-56 197
MS.gene068376.t1 MTR_5g081790 53.061 147 62 1 11 150 24 170 3.93e-51 181
MS.gene068376.t1 MTR_5g081790 37.500 280 151 8 235 506 157 420 1.77e-49 177
MS.gene068376.t1 MTR_3g008580 28.240 517 336 14 7 513 25 516 5.36e-50 181
MS.gene068376.t1 MTR_4g101650 28.407 521 336 14 13 523 29 522 3.05e-49 179
MS.gene068376.t1 MTR_1g090707 28.155 515 323 15 25 529 38 515 3.73e-43 162
MS.gene068376.t1 MTR_4g075690 25.472 530 352 12 11 536 30 520 2.19e-41 157
MS.gene068376.t1 MTR_1g026410 26.177 531 318 15 11 521 29 505 3.09e-40 153
MS.gene068376.t1 MTR_4g049390 25.787 508 336 13 5 508 20 490 7.74e-39 149
MS.gene068376.t1 MTR_3g115050 26.121 513 341 11 11 521 30 506 9.95e-39 149
MS.gene068376.t1 MTR_7g051440 27.190 548 318 20 7 523 25 522 3.71e-38 148
MS.gene068376.t1 MTR_8g479380 25.458 546 356 14 11 548 29 531 1.27e-37 146
MS.gene068376.t1 MTR_4g048350 25.591 508 336 15 5 508 20 489 1.78e-35 140
MS.gene068376.t1 MTR_4g075690 25.486 463 303 11 5 464 24 447 6.05e-35 137
MS.gene068376.t1 MTR_8g073840 38.333 180 72 3 11 189 30 171 2.66e-34 131
MS.gene068376.t1 MTR_4g083210 26.230 549 341 20 1 532 14 515 3.50e-34 136
MS.gene068376.t1 MTR_3g083450 25.045 559 354 18 12 543 27 547 4.37e-34 136
MS.gene068376.t1 MTR_8g479390 24.864 551 353 16 11 548 31 533 6.63e-34 135
MS.gene068376.t1 MTR_3g083430 24.144 555 364 15 12 543 26 546 6.71e-34 135
MS.gene068376.t1 MTR_2g088080 25.349 501 334 10 11 508 30 493 7.94e-34 135
MS.gene068376.t1 MTR_5g018270 24.858 527 348 16 11 532 31 514 1.59e-33 134
MS.gene068376.t1 MTR_4g132320 26.984 504 322 14 11 508 31 494 2.52e-33 134
MS.gene068376.t1 MTR_3g083440 24.687 559 356 18 12 543 26 546 4.24e-33 133
MS.gene068376.t1 MTR_3g083400 24.687 559 356 18 12 543 26 546 4.62e-33 133
MS.gene068376.t1 MTR_3g083390 24.687 559 356 18 12 543 26 546 7.28e-33 132
MS.gene068376.t1 MTR_4g083190 23.837 516 350 15 29 536 45 525 1.55e-31 129
MS.gene068376.t1 MTR_3g083410 24.170 542 340 17 32 543 10 510 2.67e-30 124
MS.gene068376.t1 MTR_7g058670 54.118 85 38 1 68 151 13 97 1.09e-27 107
MS.gene068376.t1 MTR_2g088080 24.775 444 294 10 68 508 6 412 2.73e-24 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068376.t1 AT2G46570 65.328 548 190 0 1 548 22 569 0.0 785
MS.gene068376.t1 AT2G46570 66.112 481 163 0 68 548 4 484 0.0 695
MS.gene068376.t1 AT5G01190 47.826 552 268 5 3 548 21 558 0.0 530
MS.gene068376.t1 AT5G05390 47.407 540 277 4 13 548 29 565 0.0 526
MS.gene068376.t1 AT2G38080 46.606 545 271 8 11 548 27 558 6.86e-179 516
MS.gene068376.t1 AT5G03260 46.703 546 273 6 9 548 24 557 6.44e-178 513
MS.gene068376.t1 AT5G58910 46.266 549 273 6 11 548 30 567 1.62e-177 513
MS.gene068376.t1 AT2G40370 44.563 561 291 6 5 548 23 580 3.77e-177 512
MS.gene068376.t1 AT5G58910 46.448 549 271 7 11 548 30 566 8.36e-177 511
MS.gene068376.t1 AT5G01190 48.000 525 257 4 30 548 30 544 1.02e-176 509
MS.gene068376.t1 AT5G60020 45.276 561 278 11 10 548 24 577 7.14e-172 498
MS.gene068376.t1 AT5G07130 45.027 553 280 9 12 548 25 569 4.29e-170 494
MS.gene068376.t1 AT2G30210 44.059 547 289 7 13 548 30 570 6.07e-170 493
MS.gene068376.t1 AT5G58910 45.896 536 261 7 24 548 6 523 1.97e-169 490
MS.gene068376.t1 AT5G60020 45.554 551 271 11 20 548 2 545 7.30e-169 489
MS.gene068376.t1 AT2G29130 46.333 559 278 11 4 548 23 573 7.00e-168 488
MS.gene068376.t1 AT1G18140 44.308 571 279 12 5 548 23 581 5.34e-166 484
MS.gene068376.t1 AT5G09360 43.462 543 289 8 13 548 38 569 1.20e-153 452
MS.gene068376.t1 AT3G09220 43.178 535 276 9 13 531 28 550 6.32e-153 450
MS.gene068376.t1 AT5G60020 44.894 519 257 11 10 506 24 535 1.19e-151 446
MS.gene068376.t1 AT5G48100 43.609 532 280 9 13 532 24 547 1.04e-148 439
MS.gene068376.t1 AT5G01050 41.758 546 297 7 15 548 32 568 2.51e-148 439
MS.gene068376.t1 AT5G07130 46.107 488 239 9 77 548 5 484 9.94e-148 434
MS.gene068376.t1 AT5G07130 46.107 488 239 9 77 548 5 484 9.94e-148 434
MS.gene068376.t1 AT5G01040 40.625 544 304 7 15 548 32 566 1.46e-143 426
MS.gene068376.t1 AT3G09220 42.765 463 241 9 83 531 1 453 2.46e-125 376
MS.gene068376.t1 AT4G39830 31.729 561 326 17 11 539 36 571 2.83e-71 239
MS.gene068376.t1 AT5G21105 31.900 558 320 19 1 526 29 558 2.75e-68 231
MS.gene068376.t1 AT5G21100 31.373 561 313 19 2 527 19 542 8.94e-68 229
MS.gene068376.t1 AT5G21105 31.054 541 313 19 1 509 29 541 2.40e-58 203
MS.gene068376.t1 AT4G39830 31.111 495 283 16 77 539 6 474 5.43e-54 190
MS.gene068376.t1 AT4G39830 31.111 495 283 16 77 539 8 476 6.54e-54 190
MS.gene068376.t1 AT4G25240 28.440 545 356 13 13 548 31 550 8.23e-51 184
MS.gene068376.t1 AT4G25240 28.440 545 356 13 13 548 31 550 8.23e-51 184
MS.gene068376.t1 AT5G48450 28.650 548 334 19 12 543 30 536 1.09e-49 181
MS.gene068376.t1 AT5G48450 28.650 548 334 19 12 543 30 536 1.58e-49 181
MS.gene068376.t1 AT5G51480 28.080 552 350 16 13 548 30 550 3.64e-49 179
MS.gene068376.t1 AT4G12420 27.473 546 350 17 12 541 26 541 4.01e-49 179
MS.gene068376.t1 AT4G12420 27.473 546 350 17 12 541 26 541 4.01e-49 179
MS.gene068376.t1 AT4G39830 29.960 494 277 15 77 539 8 463 4.50e-49 177
MS.gene068376.t1 AT1G75790 26.412 549 332 19 13 539 29 527 5.56e-44 164
MS.gene068376.t1 AT1G21850 27.853 517 325 16 11 521 29 503 2.20e-42 160
MS.gene068376.t1 AT1G21860 25.763 524 327 11 11 521 29 503 8.66e-42 158
MS.gene068376.t1 AT5G66920 24.908 546 369 12 6 548 31 538 4.86e-41 156
MS.gene068376.t1 AT5G21105 33.235 340 195 12 196 526 51 367 1.90e-40 151
MS.gene068376.t1 AT4G28090 24.497 547 361 17 5 544 22 523 7.34e-38 147
MS.gene068376.t1 AT4G38420 25.097 514 351 13 11 521 30 512 7.24e-36 141
MS.gene068376.t1 AT4G22010 25.824 546 356 16 11 548 26 530 7.67e-36 141
MS.gene068376.t1 AT1G76160 24.125 514 349 12 11 521 28 503 4.81e-35 139
MS.gene068376.t1 AT2G23630 25.135 557 342 14 12 548 31 532 9.24e-34 135
MS.gene068376.t1 AT2G23630 25.135 557 342 14 12 548 36 537 9.26e-34 135
MS.gene068376.t1 AT1G41830 23.689 515 350 13 11 521 29 504 1.08e-33 135
MS.gene068376.t1 AT4G37160 24.675 539 368 13 12 548 32 534 9.42e-33 132
MS.gene068376.t1 AT4G38420 24.742 485 331 13 11 492 30 483 6.33e-32 129
MS.gene068376.t1 AT1G55570 26.190 504 298 15 29 508 47 500 2.63e-31 128
MS.gene068376.t1 AT4G38420 25.109 458 306 13 11 464 30 454 7.32e-31 125
MS.gene068376.t1 AT1G55560 24.855 519 329 17 7 508 22 496 3.07e-30 125
MS.gene068376.t1 AT3G13390 23.952 501 327 13 22 508 39 499 1.71e-29 122
MS.gene068376.t1 AT3G13400 23.654 520 338 17 5 508 21 497 4.50e-28 118
MS.gene068376.t1 AT3G13400 23.654 520 338 17 5 508 21 497 4.50e-28 118
MS.gene068376.t1 AT4G37160 23.789 454 309 11 12 464 32 449 1.28e-21 98.2

Find 148 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGGTACCTTTCCCATTTA+AGG 0.142601 8.3:+66988782 MS.gene068376:CDS
AACTACAACTGCTCAATTAA+TGG 0.196124 8.3:+66989041 MS.gene068376:CDS
TCTTGATAAGGAGCCTTAAA+TGG 0.196962 8.3:-66988795 None:intergenic
AACATTGAAAGGTGTCTTAT+TGG 0.207388 8.3:-66988469 None:intergenic
TGAAAACATTCACTTGATTT+AGG 0.217065 8.3:-66989965 None:intergenic
AAGTTCTACGACTTCGTTAA+TGG 0.217996 8.3:+66990203 MS.gene068376:CDS
TTTGGCATGCTCATGTTTCT+TGG 0.221846 8.3:+66988715 MS.gene068376:CDS
ACTCCAATTGTATTCATATA+TGG 0.236387 8.3:-66990443 None:intergenic
AACTGTCAAGCCATGAATAA+TGG 0.250740 8.3:+66990062 MS.gene068376:CDS
AAGCTTCTAGGATTGGAATA+TGG 0.271760 8.3:-66990127 None:intergenic
GGGAAAGGTACCCTATTCTT+TGG 0.277356 8.3:-66988774 None:intergenic
TTAATTGAGCAGTTGTAGTT+AGG 0.279435 8.3:-66989038 None:intergenic
GCTTATTATAAGAAAATAAA+TGG 0.283522 8.3:+66990146 MS.gene068376:CDS
ACTAACTGCACAATTCAATT+TGG 0.283999 8.3:+66990412 MS.gene068376:CDS
ATCAAAAGGGCACTTTCTTT+TGG 0.315039 8.3:+66988697 MS.gene068376:CDS
TAGCCTACTTCAATTATATA+GGG 0.322498 8.3:+66989853 MS.gene068376:CDS
AGGGCCTGGGTGACTGTTAA+TGG 0.326349 8.3:-66989018 None:intergenic
AATTGGACATTGTGTAATAA+AGG 0.339083 8.3:-66988634 None:intergenic
GAAGAATGGAGAAGGAGATC+TGG 0.340403 8.3:+66990792 MS.gene068376:CDS
GGAATATGGCAGGGGAATAT+TGG 0.340724 8.3:+66988922 MS.gene068376:intron
ACTGTCAAGCCATGAATAAT+GGG 0.347700 8.3:+66990063 MS.gene068376:CDS
AGAACTAAGGTCCTTGAATA+TGG 0.349233 8.3:+66990272 MS.gene068376:CDS
AAACTCTGGCCCGCTTGAAT+TGG 0.351273 8.3:-66988651 None:intergenic
ATAGCCTACTTCAATTATAT+AGG 0.351392 8.3:+66989852 MS.gene068376:CDS
AGACAGTCATGGATGGATTA+AGG 0.352838 8.3:+66989940 MS.gene068376:CDS
TGGCTGAGAGGAACGGTTCA+TGG 0.360623 8.3:+66988735 MS.gene068376:CDS
GTACCAACTTAACGTGATTC+CGG 0.363195 8.3:+66989575 MS.gene068376:CDS
CCTTAACATGATGGCAGATC+TGG 0.365511 8.3:-66990835 None:intergenic
TGTCAGCACCCCATTATTCA+TGG 0.370071 8.3:-66990072 None:intergenic
AAATTGAATTGTGCAGTTAG+TGG 0.377880 8.3:-66990410 None:intergenic
AGCTTCTAGGATTGGAATAT+GGG 0.387058 8.3:-66990126 None:intergenic
CTCCAATTGTATTCATATAT+GGG 0.391433 8.3:-66990442 None:intergenic
GCCAGCTTATCATCAGGTTT+AGG 0.392466 8.3:-66989912 None:intergenic
CTTAACAAGTAGGTCCTTCC+CGG 0.393276 8.3:-66989594 None:intergenic
TGATTGTTTATCCAAAGAAT+AGG 0.395265 8.3:+66988763 MS.gene068376:CDS
TATGAATACAATTGGAGTTC+CGG 0.398110 8.3:+66990448 MS.gene068376:CDS
TTCAATGACTCCGTGTCATA+TGG 0.413446 8.3:-66990242 None:intergenic
GAGCAGTTGTAGTTAGGGCC+TGG 0.413472 8.3:-66989032 None:intergenic
GATTGTTTATCCAAAGAATA+GGG 0.418861 8.3:+66988764 MS.gene068376:CDS
CCAGATCTGCCATCATGTTA+AGG 0.420312 8.3:+66990835 MS.gene068376:CDS
ATAATTAGTTGCTCTTGATA+AGG 0.422361 8.3:-66988807 None:intergenic
TTATAATAAGCTTCTAGGAT+TGG 0.425287 8.3:-66990134 None:intergenic
ACATTGATATACACCAATCA+TGG 0.429587 8.3:+66990746 MS.gene068376:CDS
AACGAAGTCGTAGAACTTAG+AGG 0.434172 8.3:-66990198 None:intergenic
AGCAGTTGTAGTTAGGGCCT+GGG 0.439354 8.3:-66989031 None:intergenic
CTGTAGCCATGGATGTGAAT+TGG 0.439868 8.3:-66990350 None:intergenic
AACTGCACAATTCAATTTGG+TGG 0.440435 8.3:+66990415 MS.gene068376:CDS
CTTTACAGTGGTGAATCAAA+AGG 0.446706 8.3:+66988683 MS.gene068376:CDS
TAATTGAGCAGTTGTAGTTA+GGG 0.447953 8.3:-66989037 None:intergenic
TACCAACTTAACGTGATTCC+GGG 0.449429 8.3:+66989576 MS.gene068376:CDS
TCTTCTTGTGCGTAAACAAC+AGG 0.450321 8.3:-66988423 None:intergenic
ACAATCCTGCCAGACTTGTA+AGG 0.451834 8.3:-66989807 None:intergenic
GTGTCATATGGAATGTTGTT+AGG 0.453148 8.3:-66990230 None:intergenic
ACCACAGACACGGTGATGCT+TGG 0.456206 8.3:+66989714 MS.gene068376:CDS
AAAGACATTGTCACAGTCAA+TGG 0.458479 8.3:+66988387 MS.gene068376:CDS
TTGGAGTTCCGGTCGGTGGA+TGG 0.462730 8.3:+66990459 MS.gene068376:CDS
TTAACAGCCAGCTTATCATC+AGG 0.463496 8.3:-66989918 None:intergenic
CAAGAGCAACTAATTATACT+AGG 0.466170 8.3:+66988813 MS.gene068376:CDS
ATTGAATGGAACTAGAACTA+AGG 0.468333 8.3:+66990259 MS.gene068376:CDS
CTGGTTGATCAGCTGAAACT+AGG 0.471483 8.3:-66989758 None:intergenic
ACCTAAACCTGATGATAAGC+TGG 0.474955 8.3:+66989911 MS.gene068376:CDS
CTTTCAATGTTACAATTCAC+TGG 0.476945 8.3:+66988481 MS.gene068376:CDS
GCTGTTGCACCTTACAAGTC+TGG 0.478773 8.3:+66989798 MS.gene068376:CDS
CTTGATAAGGAGCCTTAAAT+GGG 0.480376 8.3:-66988794 None:intergenic
TGTAGCCATGGATGTGAATT+GGG 0.485014 8.3:-66990349 None:intergenic
ATTAATTAGTCTTAACAAGT+AGG 0.486221 8.3:-66989604 None:intergenic
TAGAACTTAGAGGGTGCGTC+AGG 0.489021 8.3:-66990188 None:intergenic
CCATTCCTAGTCCCCATGAT+TGG 0.490748 8.3:-66990759 None:intergenic
TATGACACGGAGTCATTGAA+TGG 0.494839 8.3:+66990245 MS.gene068376:CDS
TGTGCGTAAACAACAGGTCC+TGG 0.500000 8.3:-66988417 None:intergenic
ATGGTATTTATAGTGAAGAA+TGG 0.501936 8.3:+66990778 MS.gene068376:CDS
TCAGGTTTAGGTAATTTAGC+TGG 0.504745 8.3:-66989900 None:intergenic
CAGTGAATTGTAACATTGAA+AGG 0.505375 8.3:-66988480 None:intergenic
TGGAGTTCCGGTCGGTGGAT+GGG 0.506523 8.3:+66990460 MS.gene068376:CDS
TTGTTAAGACTAATTAATGC+AGG 0.514126 8.3:+66989609 MS.gene068376:CDS
TTTACAGTGGTGAATCAAAA+GGG 0.516141 8.3:+66988684 MS.gene068376:CDS
GCACCTTGGTACCATATTCA+AGG 0.520129 8.3:-66990283 None:intergenic
TATATAATTGAAGTAGGCTA+TGG 0.522248 8.3:-66989850 None:intergenic
AACTTATGGCACATGGTGCA+AGG 0.522324 8.3:+66988176 None:intergenic
TGTTTCTTGGCTGAGAGGAA+CGG 0.529635 8.3:+66988728 MS.gene068376:CDS
GGCAGGGGAATATTGGCTGC+AGG 0.531339 8.3:+66988929 MS.gene068376:intron
TTAATGGTATATGCATCTGC+TGG 0.533299 8.3:-66989002 None:intergenic
TAAAGTTATAAGTGAAACTC+TGG 0.533846 8.3:-66988665 None:intergenic
TCCAATTGTATTCATATATG+GGG 0.536273 8.3:-66990441 None:intergenic
TTGCACCTTACAAGTCTGGC+AGG 0.539924 8.3:+66989802 MS.gene068376:CDS
TTCCCGGAATCACGTTAAGT+TGG 0.539938 8.3:-66989578 None:intergenic
CCAATCATGGGGACTAGGAA+TGG 0.541532 8.3:+66990759 MS.gene068376:CDS
ACAGTCAATGGTATGTATCC+AGG 0.543289 8.3:+66988399 MS.gene068376:CDS
GAGCATGCCACTCTAGTCAA+TGG 0.543397 8.3:+66988966 MS.gene068376:CDS
TTTATAGTGAAGAATGGAGA+AGG 0.543881 8.3:+66990784 MS.gene068376:CDS
CATTGATATACACCAATCAT+GGG 0.545051 8.3:+66990747 MS.gene068376:CDS
CTGGATTATCAGCCACAAAA+CGG 0.552403 8.3:-66990490 None:intergenic
ACTTATGGCACATGGTGCAA+GGG 0.559084 8.3:+66988177 None:intergenic
ACAGCTGCCCATCCACCGAC+CGG 0.565254 8.3:-66990467 None:intergenic
GTATATGCATCTGCTGGAGG+TGG 0.568362 8.3:-66988996 None:intergenic
TACGTTGTAGGATATGGCAC+AGG 0.570942 8.3:+66990377 MS.gene068376:CDS
CAACGTAAAAGCTGTAGCCA+TGG 0.572797 8.3:-66990361 None:intergenic
CTTGTAAGGTGCAACAGCCA+TGG 0.573214 8.3:-66989793 None:intergenic
TTTGTTTGGGTGTCTTTGAG+TGG 0.573318 8.3:-66990040 None:intergenic
TGTTAAGTTGTGATTTGCAA+TGG 0.574912 8.3:-66989655 None:intergenic
ACATGATGGCAGATCTGGAG+GGG 0.576890 8.3:-66990830 None:intergenic
GCTCATGTTTCTTGGCTGAG+AGG 0.578994 8.3:+66988723 MS.gene068376:CDS
ATACACCAATCATGGGGACT+AGG 0.580579 8.3:+66990754 MS.gene068376:CDS
TAACATGATGGCAGATCTGG+AGG 0.582078 8.3:-66990832 None:intergenic
GACACGGTGATGCTTGGACC+AGG 0.583332 8.3:+66989720 MS.gene068376:CDS
GCTGTTAAGACAGTCATGGA+TGG 0.584431 8.3:+66989933 MS.gene068376:CDS
CAGCTATCATGCTGGTACGA+CGG 0.584709 8.3:+66988606 MS.gene068376:CDS
AATCACCCAATTCACATCCA+TGG 0.590062 8.3:+66990344 MS.gene068376:CDS
ATCACCGTGTCTGTGGTGAA+TGG 0.592745 8.3:-66989708 None:intergenic
ACAATTGGAGTTCCGGTCGG+TGG 0.593840 8.3:+66990455 MS.gene068376:CDS
ACCAGTAGGAAAATATTCCA+TGG 0.595442 8.3:+66989776 MS.gene068376:CDS
TAAGGAGCCTTAAATGGGAA+AGG 0.596691 8.3:-66988789 None:intergenic
CTTATGGCACATGGTGCAAG+GGG 0.596985 8.3:+66988178 None:intergenic
TACACAATGTCCAATTCAAG+CGG 0.599486 8.3:+66988641 MS.gene068376:CDS
AACATGATGGCAGATCTGGA+GGG 0.600329 8.3:-66990831 None:intergenic
ACCAGCATGATAGCTGCTGC+CGG 0.600993 8.3:-66988599 None:intergenic
TTAACAATCGTGGAAGCTGA+TGG 0.601200 8.3:+66989672 MS.gene068376:CDS
GTAGGTAGTCCTTAACATGA+TGG 0.605546 8.3:-66990844 None:intergenic
GTTTCAGCTGATCAACCAGT+AGG 0.611282 8.3:+66989762 MS.gene068376:CDS
TGCCCCTATATAATTGAAGT+AGG 0.615587 8.3:-66989856 None:intergenic
GCTTCTAGGATTGGAATATG+GGG 0.618602 8.3:-66990125 None:intergenic
ACACAATGTCCAATTCAAGC+GGG 0.618640 8.3:+66988642 MS.gene068376:CDS
TCCGGCAGCAGCTATCATGC+TGG 0.619502 8.3:+66988598 MS.gene068376:CDS
AGCCTACTTCAATTATATAG+GGG 0.623554 8.3:+66989854 MS.gene068376:CDS
ACGAAGTCGTAGAACTTAGA+GGG 0.623619 8.3:-66990197 None:intergenic
TCCAAGCATCACCGTGTCTG+TGG 0.628969 8.3:-66989715 None:intergenic
AGATGACAGAATCATAGTCA+AGG 0.630065 8.3:+66988443 MS.gene068376:CDS
AGCTCCTCCATTGACTAGAG+TGG 0.630206 8.3:-66988973 None:intergenic
CTGCAAAATGAGTTGCACCT+TGG 0.632460 8.3:-66990297 None:intergenic
GCTGGCTGTTAAGACAGTCA+TGG 0.632833 8.3:+66989929 MS.gene068376:CDS
CATGATGGCAGATCTGGAGG+GGG 0.636154 8.3:-66990829 None:intergenic
AGGACATTCAGTGTTTGACC+TGG 0.640728 8.3:-66989738 None:intergenic
AACTTAACGTGATTCCGGGA+AGG 0.644475 8.3:+66989580 MS.gene068376:CDS
GGACATTGTGTAATAAAGGA+CGG 0.648269 8.3:-66988630 None:intergenic
AAATCACAACTTAACAATCG+TGG 0.654458 8.3:+66989662 MS.gene068376:CDS
TATGTCAAACTTATGGCACA+TGG 0.655710 8.3:+66988169 None:intergenic
CCAATTGTATTCATATATGG+GGG 0.658094 8.3:-66990440 None:intergenic
ATGGTATATGCATCTGCTGG+AGG 0.664774 8.3:-66988999 None:intergenic
GGTCCTTGAATATGGTACCA+AGG 0.666302 8.3:+66990280 MS.gene068376:CDS
TTTCACTTATAACTTTACAG+TGG 0.669501 8.3:+66988671 MS.gene068376:CDS
AATACAATTGGAGTTCCGGT+CGG 0.670994 8.3:+66990452 MS.gene068376:CDS
GAAGCCATTCACCACAGACA+CGG 0.671173 8.3:+66989704 MS.gene068376:CDS
CATGCCACTCTAGTCAATGG+AGG 0.673164 8.3:+66988969 MS.gene068376:CDS
CTGTCAAGCCATGAATAATG+GGG 0.678450 8.3:+66990064 MS.gene068376:CDS
TAACAACATTCCATATGACA+CGG 0.689215 8.3:+66990232 MS.gene068376:CDS
TATACCATTAACAGTCACCC+AGG 0.695513 8.3:+66989014 MS.gene068376:CDS
GTGCAAGGGGAGAATCAACA+AGG 0.699031 8.3:+66988191 MS.gene068376:CDS
ATTGATATACACCAATCATG+GGG 0.716904 8.3:+66990748 MS.gene068376:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTGATTTCATTTAA+TGG + chr8.3:66989104-66989123 MS.gene068376:intron 10.0%
!!! AAAATATTTCTATTTATTTG+TGG + chr8.3:66988269-66988288 MS.gene068376:intron 10.0%
!!! AAACTTTATTTTCAAATTTT+AGG + chr8.3:66988568-66988587 MS.gene068376:intron 10.0%
!!! AAATATTGATTTCATTTAAT+GGG + chr8.3:66989105-66989124 MS.gene068376:intron 10.0%
!! GCTTATTATAAGAAAATAAA+TGG + chr8.3:66990146-66990165 MS.gene068376:CDS 15.0%
!! TTAAGTTACGTAAAATAATT+TGG + chr8.3:66989361-66989380 MS.gene068376:intron 15.0%
!!! AATATTGATTTCATTTAATG+GGG + chr8.3:66989106-66989125 MS.gene068376:intron 15.0%
!!! CTATTTTCTTAAATTATTAC+TGG + chr8.3:66989226-66989245 MS.gene068376:intron 15.0%
!!! TTGATTTCTTTTTTTCTTTT+TGG + chr8.3:66990654-66990673 MS.gene068376:intron 15.0%
!! AAAAATATATTCATCACCAT+TGG + chr8.3:66989999-66990018 MS.gene068376:CDS 20.0%
!! AAATGAAATATACATTGATG+AGG - chr8.3:66990523-66990542 None:intergenic 20.0%
!! ATAGGTTGTATACAATATTA+AGG - chr8.3:66989135-66989154 None:intergenic 20.0%
!! TATTCATTTCTTATAGTCAA+TGG + chr8.3:66990687-66990706 MS.gene068376:intron 20.0%
!!! ATATTGATTTCATTTAATGG+GGG + chr8.3:66989107-66989126 MS.gene068376:intron 20.0%
!!! ATTAATTAGTCTTAACAAGT+AGG - chr8.3:66989607-66989626 None:intergenic 20.0%
!!! GTCAGTGATTATTTTATAAA+GGG + chr8.3:66989324-66989343 MS.gene068376:intron 20.0%
!!! TATTTTTTCTACAAATGTGA+AGG - chr8.3:66988255-66988274 None:intergenic 20.0%
!!! TGTCAGTGATTATTTTATAA+AGG + chr8.3:66989323-66989342 MS.gene068376:intron 20.0%
!!! TTATTTTCAAATTTTAGGCA+TGG + chr8.3:66988573-66988592 MS.gene068376:intron 20.0%
!!! TTTTCTTATAATAAGCTTCT+AGG - chr8.3:66990142-66990161 None:intergenic 20.0%
!!! TTTTTTAACATTCAATCCAA+TGG - chr8.3:66990018-66990037 None:intergenic 20.0%
! AAACATTGAATTCAAACCAA+AGG - chr8.3:66988855-66988874 None:intergenic 25.0%
! AATTGGACATTGTGTAATAA+AGG - chr8.3:66988637-66988656 None:intergenic 25.0%
! ACTCCAATTGTATTCATATA+TGG - chr8.3:66990446-66990465 None:intergenic 25.0%
! ATAATTAGTTGCTCTTGATA+AGG - chr8.3:66988810-66988829 None:intergenic 25.0%
! ATAGCCTACTTCAATTATAT+AGG + chr8.3:66989852-66989871 MS.gene068376:CDS 25.0%
! ATGGTATTTATAGTGAAGAA+TGG + chr8.3:66990778-66990797 MS.gene068376:CDS 25.0%
! CTCCAATTGTATTCATATAT+GGG - chr8.3:66990445-66990464 None:intergenic 25.0%
! GATTGTTTATCCAAAGAATA+GGG + chr8.3:66988764-66988783 MS.gene068376:CDS 25.0%
! GTAAAATAATTTGGCTAACA+TGG + chr8.3:66989370-66989389 MS.gene068376:intron 25.0%
! TAAAGTTATAAGTGAAACTC+TGG - chr8.3:66988668-66988687 None:intergenic 25.0%
! TAGCCTACTTCAATTATATA+GGG + chr8.3:66989853-66989872 MS.gene068376:CDS 25.0%
! TATACTAGGTAACTTAAATG+TGG + chr8.3:66988827-66988846 MS.gene068376:intron 25.0%
! TATATAATTGAAGTAGGCTA+TGG - chr8.3:66989853-66989872 None:intergenic 25.0%
! TCCAATTGTATTCATATATG+GGG - chr8.3:66990444-66990463 None:intergenic 25.0%
! TGAAAACATTCACTTGATTT+AGG - chr8.3:66989968-66989987 None:intergenic 25.0%
! TGATTGTTTATCCAAAGAAT+AGG + chr8.3:66988763-66988782 MS.gene068376:CDS 25.0%
! TTGTTAAGACTAATTAATGC+AGG + chr8.3:66989609-66989628 MS.gene068376:CDS 25.0%
! TTTCACTTATAACTTTACAG+TGG + chr8.3:66988671-66988690 MS.gene068376:CDS 25.0%
!! AACAAGGTTCTATGATTTTA+AGG + chr8.3:66988207-66988226 MS.gene068376:CDS 25.0%
!! TCAATATTTTCACTATCACT+TGG - chr8.3:66989094-66989113 None:intergenic 25.0%
!! TTTCCATTTTACTAAACATC+CGG + chr8.3:66990542-66990561 MS.gene068376:intron 25.0%
!!! ACTATTTTTGATGTGCTTAA+TGG + chr8.3:66988317-66988336 MS.gene068376:intron 25.0%
!!! GTGATTATTTTATAAAGGGA+TGG + chr8.3:66989328-66989347 MS.gene068376:intron 25.0%
!!! TTATAATAAGCTTCTAGGAT+TGG - chr8.3:66990137-66990156 None:intergenic 25.0%
AAATCACAACTTAACAATCG+TGG + chr8.3:66989662-66989681 MS.gene068376:CDS 30.0%
AAATTGAATTGTGCAGTTAG+TGG - chr8.3:66990413-66990432 None:intergenic 30.0%
AACTACAACTGCTCAATTAA+TGG + chr8.3:66989041-66989060 MS.gene068376:CDS 30.0%
AATGAACTGCATTATGTATG+AGG - chr8.3:66988522-66988541 None:intergenic 30.0%
ACATTGATATACACCAATCA+TGG + chr8.3:66990746-66990765 MS.gene068376:CDS 30.0%
ACTAACTGCACAATTCAATT+TGG + chr8.3:66990412-66990431 MS.gene068376:CDS 30.0%
ACTAATGTTGTGTGCTAATT+CGG + chr8.3:66988901-66988920 MS.gene068376:intron 30.0%
AGCCTACTTCAATTATATAG+GGG + chr8.3:66989854-66989873 MS.gene068376:CDS 30.0%
ATTGAATGGAACTAGAACTA+AGG + chr8.3:66990259-66990278 MS.gene068376:CDS 30.0%
ATTGATATACACCAATCATG+GGG + chr8.3:66990748-66990767 MS.gene068376:CDS 30.0%
CAAGAGCAACTAATTATACT+AGG + chr8.3:66988813-66988832 MS.gene068376:CDS 30.0%
CAGTGAATTGTAACATTGAA+AGG - chr8.3:66988483-66988502 None:intergenic 30.0%
CATTGATATACACCAATCAT+GGG + chr8.3:66990747-66990766 MS.gene068376:CDS 30.0%
CCAATTGTATTCATATATGG+GGG - chr8.3:66990443-66990462 None:intergenic 30.0%
CTTTCAATGTTACAATTCAC+TGG + chr8.3:66988481-66988500 MS.gene068376:CDS 30.0%
TAACAACATTCCATATGACA+CGG + chr8.3:66990232-66990251 MS.gene068376:CDS 30.0%
TAACTTAAATGTGGTTCCTT+TGG + chr8.3:66988836-66988855 MS.gene068376:intron 30.0%
TAATTGAGCAGTTGTAGTTA+GGG - chr8.3:66989040-66989059 None:intergenic 30.0%
TACAAATGTGAAGGTCAAAA+TGG - chr8.3:66988246-66988265 None:intergenic 30.0%
TATGAATACAATTGGAGTTC+CGG + chr8.3:66990448-66990467 MS.gene068376:CDS 30.0%
TTAATTGAGCAGTTGTAGTT+AGG - chr8.3:66989041-66989060 None:intergenic 30.0%
TTTACAGTGGTGAATCAAAA+GGG + chr8.3:66988684-66988703 MS.gene068376:CDS 30.0%
TTTATAGTGAAGAATGGAGA+AGG + chr8.3:66990784-66990803 MS.gene068376:CDS 30.0%
! ATGTTAGTGCTCAATTTGTT+AGG - chr8.3:66990603-66990622 None:intergenic 30.0%
! TCAATGGTATAACTTTTTGC+AGG + chr8.3:66990703-66990722 MS.gene068376:intron 30.0%
! TGTTAAGTTGTGATTTGCAA+TGG - chr8.3:66989658-66989677 None:intergenic 30.0%
! TTCCATTTTACTAAACATCC+GGG + chr8.3:66990543-66990562 MS.gene068376:intron 30.0%
!! AACATTGAAAGGTGTCTTAT+TGG - chr8.3:66988472-66988491 None:intergenic 30.0%
!! TGTTAGTGCTCAATTTGTTA+GGG - chr8.3:66990602-66990621 None:intergenic 30.0%
!!! CTTTTTTTCTTTTTGGCTGA+AGG + chr8.3:66990661-66990680 MS.gene068376:intron 30.0%
AAAGACATTGTCACAGTCAA+TGG + chr8.3:66988387-66988406 MS.gene068376:CDS 35.0%
AACTGCACAATTCAATTTGG+TGG + chr8.3:66990415-66990434 MS.gene068376:CDS 35.0%
AACTGTCAAGCCATGAATAA+TGG + chr8.3:66990062-66990081 MS.gene068376:CDS 35.0%
AAGTTCTACGACTTCGTTAA+TGG + chr8.3:66990203-66990222 MS.gene068376:CDS 35.0%
ACCAGTAGGAAAATATTCCA+TGG + chr8.3:66989776-66989795 MS.gene068376:CDS 35.0%
ACTGTCAAGCCATGAATAAT+GGG + chr8.3:66990063-66990082 MS.gene068376:CDS 35.0%
AGAACTAAGGTCCTTGAATA+TGG + chr8.3:66990272-66990291 MS.gene068376:CDS 35.0%
AGATGACAGAATCATAGTCA+AGG + chr8.3:66988443-66988462 MS.gene068376:CDS 35.0%
CAGTCTCATGGATATTGTTA+TGG - chr8.3:66989436-66989455 None:intergenic 35.0%
CCCCCATATATGAATACAAT+TGG + chr8.3:66990440-66990459 MS.gene068376:CDS 35.0%
CTTCATACTGAAAACATGTC+CGG + chr8.3:66989167-66989186 MS.gene068376:intron 35.0%
CTTGATAAGGAGCCTTAAAT+GGG - chr8.3:66988797-66988816 None:intergenic 35.0%
CTTTACAGTGGTGAATCAAA+AGG + chr8.3:66988683-66988702 MS.gene068376:CDS 35.0%
GGACATTGTGTAATAAAGGA+CGG - chr8.3:66988633-66988652 None:intergenic 35.0%
GTGTCATATGGAATGTTGTT+AGG - chr8.3:66990233-66990252 None:intergenic 35.0%
TACACAATGTCCAATTCAAG+CGG + chr8.3:66988641-66988660 MS.gene068376:CDS 35.0%
TCAGGTTTAGGTAATTTAGC+TGG - chr8.3:66989903-66989922 None:intergenic 35.0%
TCTTGATAAGGAGCCTTAAA+TGG - chr8.3:66988798-66988817 None:intergenic 35.0%
TGCCCCTATATAATTGAAGT+AGG - chr8.3:66989859-66989878 None:intergenic 35.0%
TTAATGGTATATGCATCTGC+TGG - chr8.3:66989005-66989024 None:intergenic 35.0%
TTGTGTGCTAATTCGGAATA+TGG + chr8.3:66988908-66988927 MS.gene068376:intron 35.0%
! AGCTTTTACGTTGTAGGATA+TGG + chr8.3:66990371-66990390 MS.gene068376:CDS 35.0%
! ATGAAGCACTAACACATACA+CGG - chr8.3:66989287-66989306 None:intergenic 35.0%
! CAAATTTTAGGCATGGTATC+CGG + chr8.3:66988580-66988599 MS.gene068376:intron 35.0%
! CTAAACCAGTCTAAGACAAT+TGG + chr8.3:66989472-66989491 MS.gene068376:intron 35.0%
! TATAACTTTTTGCAGGTGTG+TGG + chr8.3:66990710-66990729 MS.gene068376:intron 35.0%
! TCCATTTTACTAAACATCCG+GGG + chr8.3:66990544-66990563 MS.gene068376:intron 35.0%
! TTCAGTATGAAGTGTCAATG+TGG - chr8.3:66989159-66989178 None:intergenic 35.0%
!! AAGCTTCTAGGATTGGAATA+TGG - chr8.3:66990130-66990149 None:intergenic 35.0%
!! AGCTTCTAGGATTGGAATAT+GGG - chr8.3:66990129-66990148 None:intergenic 35.0%
!! GTTAGTGCTCAATTTGTTAG+GGG - chr8.3:66990601-66990620 None:intergenic 35.0%
!! TTAGTGCTCAATTTGTTAGG+GGG - chr8.3:66990600-66990619 None:intergenic 35.0%
!!! ATCAAAAGGGCACTTTCTTT+TGG + chr8.3:66988697-66988716 MS.gene068376:CDS 35.0%
!!! ATGGCTTGACAGTTTTGTTT+GGG - chr8.3:66990056-66990075 None:intergenic 35.0%
AACGAAGTCGTAGAACTTAG+AGG - chr8.3:66990201-66990220 None:intergenic 40.0%
AATACAATTGGAGTTCCGGT+CGG + chr8.3:66990452-66990471 MS.gene068376:CDS 40.0%
AATCACCCAATTCACATCCA+TGG + chr8.3:66990344-66990363 MS.gene068376:CDS 40.0%
AATTTGGCTAACATGGTGCA+TGG + chr8.3:66989377-66989396 MS.gene068376:intron 40.0%
ACACAATGTCCAATTCAAGC+GGG + chr8.3:66988642-66988661 MS.gene068376:CDS 40.0%
ACAGTCAATGGTATGTATCC+AGG + chr8.3:66988399-66988418 MS.gene068376:CDS 40.0%
ACATTGATGAGGTGTATACC+TGG - chr8.3:66990512-66990531 None:intergenic 40.0%
ACCCCGGATGTTTAGTAAAA+TGG - chr8.3:66990548-66990567 None:intergenic 40.0%
ACCTAAACCTGATGATAAGC+TGG + chr8.3:66989911-66989930 MS.gene068376:CDS 40.0%
ACGAAGTCGTAGAACTTAGA+GGG - chr8.3:66990200-66990219 None:intergenic 40.0%
AGTTGCCAATTGTCTTAGAC+TGG - chr8.3:66989480-66989499 None:intergenic 40.0%
CAATATCCATGAGACTGCAT+AGG + chr8.3:66989439-66989458 MS.gene068376:intron 40.0%
CTGGATTATCAGCCACAAAA+CGG - chr8.3:66990493-66990512 None:intergenic 40.0%
CTGTCAAGCCATGAATAATG+GGG + chr8.3:66990064-66990083 MS.gene068376:CDS 40.0%
GTACCAACTTAACGTGATTC+CGG + chr8.3:66989575-66989594 MS.gene068376:CDS 40.0%
GTGCTTAATGGTTACTGTAC+AGG + chr8.3:66988329-66988348 MS.gene068376:intron 40.0%
TAAGGAGCCTTAAATGGGAA+AGG - chr8.3:66988792-66988811 None:intergenic 40.0%
TACCAACTTAACGTGATTCC+GGG + chr8.3:66989576-66989595 MS.gene068376:CDS 40.0%
TATACCATTAACAGTCACCC+AGG + chr8.3:66989014-66989033 MS.gene068376:CDS 40.0%
TATGACACGGAGTCATTGAA+TGG + chr8.3:66990245-66990264 MS.gene068376:CDS 40.0%
TCTTCTTGTGCGTAAACAAC+AGG - chr8.3:66988426-66988445 None:intergenic 40.0%
TGCTAATTCGGAATATGGCA+GGG + chr8.3:66988913-66988932 MS.gene068376:intron 40.0%
TGTAGCCATGGATGTGAATT+GGG - chr8.3:66990352-66990371 None:intergenic 40.0%
TTAACAATCGTGGAAGCTGA+TGG + chr8.3:66989672-66989691 MS.gene068376:CDS 40.0%
TTAACAGCCAGCTTATCATC+AGG - chr8.3:66989921-66989940 None:intergenic 40.0%
TTCAATGACTCCGTGTCATA+TGG - chr8.3:66990245-66990264 None:intergenic 40.0%
TTTGGCATGCTCATGTTTCT+TGG + chr8.3:66988715-66988734 MS.gene068376:CDS 40.0%
TTTGTTTGGGTGTCTTTGAG+TGG - chr8.3:66990043-66990062 None:intergenic 40.0%
! ATGAAGTGTCAATGTGGCAT+AGG - chr8.3:66989153-66989172 None:intergenic 40.0%
! CAACTCATTTTGCAGAACAC+AGG + chr8.3:66990305-66990324 MS.gene068376:CDS 40.0%
! GCCATGGAATATTTTCCTAC+TGG - chr8.3:66989780-66989799 None:intergenic 40.0%
! TAGGGTACCTTTCCCATTTA+AGG + chr8.3:66988782-66988801 MS.gene068376:CDS 40.0%
!! AGACAGTCATGGATGGATTA+AGG + chr8.3:66989940-66989959 MS.gene068376:CDS 40.0%
!! GCTTCTAGGATTGGAATATG+GGG - chr8.3:66990128-66990147 None:intergenic 40.0%
!!! CATGGCTTGACAGTTTTGTT+TGG - chr8.3:66990057-66990076 None:intergenic 40.0%
AACATGATGGCAGATCTGGA+GGG - chr8.3:66990834-66990853 None:intergenic 45.0%
AACTTAACGTGATTCCGGGA+AGG + chr8.3:66989580-66989599 MS.gene068376:CDS 45.0%
ACAATCCTGCCAGACTTGTA+AGG - chr8.3:66989810-66989829 None:intergenic 45.0%
AGGACATTCAGTGTTTGACC+TGG - chr8.3:66989741-66989760 None:intergenic 45.0%
ATACACCAATCATGGGGACT+AGG + chr8.3:66990754-66990773 MS.gene068376:CDS 45.0%
ATGGTATATGCATCTGCTGG+AGG - chr8.3:66989002-66989021 None:intergenic 45.0%
CAACGTAAAAGCTGTAGCCA+TGG - chr8.3:66990364-66990383 None:intergenic 45.0%
CTGCAAAATGAGTTGCACCT+TGG - chr8.3:66990300-66990319 None:intergenic 45.0%
CTGGTTGATCAGCTGAAACT+AGG - chr8.3:66989761-66989780 None:intergenic 45.0%
CTGTAGCCATGGATGTGAAT+TGG - chr8.3:66990353-66990372 None:intergenic 45.0%
CTTAACAAGTAGGTCCTTCC+CGG - chr8.3:66989597-66989616 None:intergenic 45.0%
GAAGAATGGAGAAGGAGATC+TGG + chr8.3:66990792-66990811 MS.gene068376:CDS 45.0%
GCACCTTGGTACCATATTCA+AGG - chr8.3:66990286-66990305 None:intergenic 45.0%
GCCAGCTTATCATCAGGTTT+AGG - chr8.3:66989915-66989934 None:intergenic 45.0%
GCTAATTCGGAATATGGCAG+GGG + chr8.3:66988914-66988933 MS.gene068376:intron 45.0%
GCTGTTAAGACAGTCATGGA+TGG + chr8.3:66989933-66989952 MS.gene068376:CDS 45.0%
GGAATATGGCAGGGGAATAT+TGG + chr8.3:66988922-66988941 MS.gene068376:intron 45.0%
GGTCCTTGAATATGGTACCA+AGG + chr8.3:66990280-66990299 MS.gene068376:CDS 45.0%
GTGCTAATTCGGAATATGGC+AGG + chr8.3:66988912-66988931 MS.gene068376:intron 45.0%
GTTTCAGCTGATCAACCAGT+AGG + chr8.3:66989762-66989781 MS.gene068376:CDS 45.0%
TAACATGATGGCAGATCTGG+AGG - chr8.3:66990835-66990854 None:intergenic 45.0%
TACGTTGTAGGATATGGCAC+AGG + chr8.3:66990377-66990396 MS.gene068376:CDS 45.0%
TGTCAGCACCCCATTATTCA+TGG - chr8.3:66990075-66990094 None:intergenic 45.0%
TGTTTCTTGGCTGAGAGGAA+CGG + chr8.3:66988728-66988747 MS.gene068376:CDS 45.0%
TTCCCGGAATCACGTTAAGT+TGG - chr8.3:66989581-66989600 None:intergenic 45.0%
! CGTTTTGTGGCTGATAATCC+AGG + chr8.3:66990491-66990510 MS.gene068376:CDS 45.0%
! GGCTACAGCTTTTACGTTGT+AGG + chr8.3:66990365-66990384 MS.gene068376:CDS 45.0%
!! GGGAAAGGTACCCTATTCTT+TGG - chr8.3:66988777-66988796 None:intergenic 45.0%
!! TGCTCAATTTGTTAGGGGGA+GGG - chr8.3:66990596-66990615 None:intergenic 45.0%
AAACTCTGGCCCGCTTGAAT+TGG - chr8.3:66988654-66988673 None:intergenic 50.0%
ACATGATGGCAGATCTGGAG+GGG - chr8.3:66990833-66990852 None:intergenic 50.0%
AGCAGTTGTAGTTAGGGCCT+GGG - chr8.3:66989034-66989053 None:intergenic 50.0%
ATCACCGTGTCTGTGGTGAA+TGG - chr8.3:66989711-66989730 None:intergenic 50.0%
CAGCTATCATGCTGGTACGA+CGG + chr8.3:66988606-66988625 MS.gene068376:CDS 50.0%
CATGCCACTCTAGTCAATGG+AGG + chr8.3:66988969-66988988 MS.gene068376:CDS 50.0%
CCAATCATGGGGACTAGGAA+TGG + chr8.3:66990759-66990778 MS.gene068376:CDS 50.0%
CCATTCCTAGTCCCCATGAT+TGG - chr8.3:66990762-66990781 None:intergenic 50.0%
CGTGTCAGTTGTGTCAGTGT+TGG - chr8.3:66989196-66989215 None:intergenic 50.0%
CTTGTAAGGTGCAACAGCCA+TGG - chr8.3:66989796-66989815 None:intergenic 50.0%
GAAGCCATTCACCACAGACA+CGG + chr8.3:66989704-66989723 MS.gene068376:CDS 50.0%
GAGCATGCCACTCTAGTCAA+TGG + chr8.3:66988966-66988985 MS.gene068376:CDS 50.0%
GCTCATGTTTCTTGGCTGAG+AGG + chr8.3:66988723-66988742 MS.gene068376:CDS 50.0%
GCTGGCTGTTAAGACAGTCA+TGG + chr8.3:66989929-66989948 MS.gene068376:CDS 50.0%
GCTGTTGCACCTTACAAGTC+TGG + chr8.3:66989798-66989817 MS.gene068376:CDS 50.0%
GTATATGCATCTGCTGGAGG+TGG - chr8.3:66988999-66989018 None:intergenic 50.0%
GTGCAAGGGGAGAATCAACA+AGG + chr8.3:66988191-66988210 MS.gene068376:CDS 50.0%
TAGTGGCAGAGATCAAACCC+CGG - chr8.3:66990564-66990583 None:intergenic 50.0%
TGTGCGTAAACAACAGGTCC+TGG - chr8.3:66988420-66988439 None:intergenic 50.0%
TTGCACCTTACAAGTCTGGC+AGG + chr8.3:66989802-66989821 MS.gene068376:CDS 50.0%
TTGGCTAACATGGTGCATGG+TGG + chr8.3:66989380-66989399 MS.gene068376:intron 50.0%
! AGCTCCTCCATTGACTAGAG+TGG - chr8.3:66988976-66988995 None:intergenic 50.0%
! GTTGTGTCAGTGTTGGACAC+CGG - chr8.3:66989189-66989208 None:intergenic 50.0%
! TAGAACTTAGAGGGTGCGTC+AGG - chr8.3:66990191-66990210 None:intergenic 50.0%
!! GGGGAGGGAGAATTTGTTAG+TGG - chr8.3:66990581-66990600 None:intergenic 50.0%
!! GTGCTCAATTTGTTAGGGGG+AGG - chr8.3:66990597-66990616 None:intergenic 50.0%
ACAATTGGAGTTCCGGTCGG+TGG + chr8.3:66990455-66990474 MS.gene068376:CDS 55.0%
ACCACAGACACGGTGATGCT+TGG + chr8.3:66989714-66989733 MS.gene068376:CDS 55.0%
ACCAGCATGATAGCTGCTGC+CGG - chr8.3:66988602-66988621 None:intergenic 55.0%
AGGGCCTGGGTGACTGTTAA+TGG - chr8.3:66989021-66989040 None:intergenic 55.0%
CATGATGGCAGATCTGGAGG+GGG - chr8.3:66990832-66990851 None:intergenic 55.0%
CCAGTGCCTATGCAGTCTCA+TGG - chr8.3:66989448-66989467 None:intergenic 55.0%
CCATGAGACTGCATAGGCAC+TGG + chr8.3:66989445-66989464 MS.gene068376:intron 55.0%
GAGCAGTTGTAGTTAGGGCC+TGG - chr8.3:66989035-66989054 None:intergenic 55.0%
TCCAAGCATCACCGTGTCTG+TGG - chr8.3:66989718-66989737 None:intergenic 55.0%
TGGCTGAGAGGAACGGTTCA+TGG + chr8.3:66988735-66988754 MS.gene068376:CDS 55.0%
! ATGGGCAGCTGTCCGTTTTG+TGG + chr8.3:66990478-66990497 MS.gene068376:CDS 55.0%
GACACGGTGATGCTTGGACC+AGG + chr8.3:66989720-66989739 MS.gene068376:CDS 60.0%
TCCGGCAGCAGCTATCATGC+TGG + chr8.3:66988598-66988617 MS.gene068376:CDS 60.0%
TGGAGTTCCGGTCGGTGGAT+GGG + chr8.3:66990460-66990479 MS.gene068376:CDS 60.0%
TTGGAGTTCCGGTCGGTGGA+TGG + chr8.3:66990459-66990478 MS.gene068376:CDS 60.0%
! GGCAGGGGAATATTGGCTGC+AGG + chr8.3:66988929-66988948 MS.gene068376:intron 60.0%
ACAGCTGCCCATCCACCGAC+CGG - chr8.3:66990470-66990489 None:intergenic 65.0%
GGCAGATCTGGAGGGGGATG+TGG - chr8.3:66990826-66990845 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 66988181 66990855 66988181 ID=MS.gene068376
chr8.3 mRNA 66988181 66990855 66988181 ID=MS.gene068376.t1;Parent=MS.gene068376
chr8.3 exon 66988181 66988228 66988181 ID=MS.gene068376.t1.exon1;Parent=MS.gene068376.t1
chr8.3 CDS 66988181 66988228 66988181 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
chr8.3 exon 66988351 66988502 66988351 ID=MS.gene068376.t1.exon2;Parent=MS.gene068376.t1
chr8.3 CDS 66988351 66988502 66988351 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
chr8.3 exon 66988590 66988834 66988590 ID=MS.gene068376.t1.exon3;Parent=MS.gene068376.t1
chr8.3 CDS 66988590 66988834 66988590 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
chr8.3 exon 66988934 66989062 66988934 ID=MS.gene068376.t1.exon4;Parent=MS.gene068376.t1
chr8.3 CDS 66988934 66989062 66988934 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
chr8.3 exon 66989571 66990512 66989571 ID=MS.gene068376.t1.exon5;Parent=MS.gene068376.t1
chr8.3 CDS 66989571 66990512 66989571 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
chr8.3 exon 66990725 66990855 66990725 ID=MS.gene068376.t1.exon6;Parent=MS.gene068376.t1
chr8.3 CDS 66990725 66990855 66990725 ID=cds.MS.gene068376.t1;Parent=MS.gene068376.t1
Gene Sequence

>MS.gene068376

ATGGCACATGGTGCAAGGGGAGAATCAACAAGGTTCTATGATTTTAAGGTATCTTCTTTGTTCCATTTTGACCTTCACATTTGTAGAAAAAATATTTCTATTTATTTGTGGTTTTCAAAATTCAAAAGCAATATTAACTATTTTTGATGTGCTTAATGGTTACTGTACAGGTTCAAACTAAAAGAGTTGCAAAACTTTGCAACTCAAAAGACATTGTCACAGTCAATGGTATGTATCCAGGACCTGTTGTTTACGCACAAGAAGATGACAGAATCATAGTCAAGGTTACCAATAAGACACCTTTCAATGTTACAATTCACTGGTAATTTCAAGCACAACCTCATACATAATGCAGTTCATTTAATTAAAAATGATAATTTAACTAACAAACTTTATTTTCAAATTTTAGGCATGGTATCCGGCAGCAGCTATCATGCTGGTACGACGGACCGTCCTTTATTACACAATGTCCAATTCAAGCGGGCCAGAGTTTCACTTATAACTTTACAGTGGTGAATCAAAAGGGCACTTTCTTTTGGCATGCTCATGTTTCTTGGCTGAGAGGAACGGTTCATGGAGCTATGATTGTTTATCCAAAGAATAGGGTACCTTTCCCATTTAAGGCTCCTTATCAAGAGCAACTAATTATACTAGGTAACTTAAATGTGGTTCCTTTGGTTTGAATTCAATGTTTCAAGTTGTATGTTTTCTCTATACAACACTAATGTTGTGTGCTAATTCGGAATATGGCAGGGGAATATTGGCTGCAGGATCTTCAACAAATTGAGCATGCCACTCTAGTCAATGGAGGAGCTCCACCTCCAGCAGATGCATATACCATTAACAGTCACCCAGGCCCTAACTACAACTGCTCAATTAATGGTATTTTTGAGATAAAAGAAGATAAATACCAAGTGATAGTGAAAATATTGATTTCATTTAATGGGGGTTCCTTAATATTGTATACAACCTATGCCACATTGACACTTCATACTGAAAACATGTCCGGTGTCCAACACTGACACAACTGACACGCTCAATCATTCTATTTTCTTAAATTATTACTGGTCTCTACGTGTATGTTTCAATGTGATTTTTTATGTCCGTGTATGTGTTAGTGCTTCATAGTATACAACTAACAATGTCAGTGATTATTTTATAAAGGGATGGCTCAATCAGATTAAGTTACGTAAAATAATTTGGCTAACATGGTGCATGGTGGTAATCTTTTTTCACTAAGAATCTATTGACACCATAACAATATCCATGAGACTGCATAGGCACTGGTCTTCTAAACCAGTCTAAGACAATTGGCAACTCACAACTTTGTAGTTTAAATTTTCTATCTTCAGTTTTCACTTACATGTTTCATTTTCTATTATCTTTTCAGATGTGTACCAACTTAACGTGATTCCGGGAAGGACCTACTTGTTAAGACTAATTAATGCAGGTTTAAACACTGAGAACTTCTTTGCCATTGCAAATCACAACTTAACAATCGTGGAAGCTGATGGTGAATACACGAAGCCATTCACCACAGACACGGTGATGCTTGGACCAGGTCAAACACTGAATGTCCTAGTTTCAGCTGATCAACCAGTAGGAAAATATTCCATGGCTGTTGCACCTTACAAGTCTGGCAGGATTGTCAAATATCAAAATGTTTCAGCCATAGCCTACTTCAATTATATAGGGGCAGAATCTAACTGTTCATATTTACCAGCTAAATTACCTAAACCTGATGATAAGCTGGCTGTTAAGACAGTCATGGATGGATTAAGGAGCCTAAATCAAGTGAATGTTTTCAAAGAAATCGATAAAAATATATTCATCACCATTGGATTGAATGTTAAAAAATGCCACTCAAAGACACCCAAACAAAACTGTCAAGCCATGAATAATGGGGTGCTGACAGCTTCAATGAACAATATAAGTTTCGTTCATCCCCATATTCCAATCCTAGAAGCTTATTATAAGAAAATAAATGGATCGTACACTGAAGATTTTCCTGACGCACCCTCTAAGTTCTACGACTTCGTTAATGGTGCTCCTAACAACATTCCATATGACACGGAGTCATTGAATGGAACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTGCAACTCATTTTGCAGAACACAGGAACAGTCAACATTGAAAATCACCCAATTCACATCCATGGCTACAGCTTTTACGTTGTAGGATATGGCACAGGCAACTATAATCCACTAACTGCACAATTCAATTTGGTGGATCCCCCATATATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCTGTCCGTTTTGTGGCTGATAATCCAGGTATACACCTCATCAATGTATATTTCATTTTTCCATTTTACTAAACATCCGGGGTTTGATCTCTGCCACTAACAAATTCTCCCTCCCCCTAACAAATTGAGCACTAACATTTGCATATAAAAAAAAAAAAACACAAAACTGTTGATTTCTTTTTTTCTTTTTGGCTGAAGGAATTATTCATTTCTTATAGTCAATGGTATAACTTTTTGCAGGTGTGTGGTACATGCACTGTCACATTGATATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAGAAGGAGATCTGGAGTCTTTACCACATCCCCCTCCAGATCTGCCATCATGTTAA
Protein sequence

>MS.gene068376.t1

MAHGARGESTRFYDFKVQTKRVAKLCNSKDIVTVNGMYPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGIRQQLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRVPFPFKAPYQEQLIILGEYWLQDLQQIEHATLVNGGAPPPADAYTINSHPGPNYNCSINDVYQLNVIPGRTYLLRLINAGLNTENFFAIANHNLTIVEADGEYTKPFTTDTVMLGPGQTLNVLVSADQPVGKYSMAVAPYKSGRIVKYQNVSAIAYFNYIGAESNCSYLPAKLPKPDDKLAVKTVMDGLRSLNQVNVFKEIDKNIFITIGLNVKKCHSKTPKQNCQAMNNGVLTASMNNISFVHPHIPILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYNPLTAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGEGDLESLPHPPPDLPSC