Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068447.t1 | XP_004497487.1 | 69.8 | 556 | 168 | 0 | 1 | 556 | 1 | 556 | 1.60E-229 | 805.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068447.t1 | B9SCB6 | 49.9 | 553 | 273 | 2 | 1 | 553 | 1 | 549 | 7.2e-162 | 572.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068447.t1 | A0A1S2Y0Q7 | 69.8 | 556 | 168 | 0 | 1 | 556 | 1 | 556 | 1.2e-229 | 805.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene068447 | MS.gene045736 | PPI |
MS.gene068447 | MS.gene42723 | PPI |
MS.gene068447 | MS.gene069726 | PPI |
MS.gene038985 | MS.gene068447 | PPI |
MS.gene066310 | MS.gene068447 | PPI |
MS.gene068447 | MS.gene038982 | PPI |
MS.gene068447 | MS.gene066316 | PPI |
MS.gene068447 | MS.gene77594 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068447.t1 | MTR_5g062230 | 67.986 | 556 | 175 | 1 | 1 | 556 | 1 | 553 | 0.0 | 799 |
MS.gene068447.t1 | MTR_6g008560 | 66.966 | 557 | 183 | 1 | 1 | 556 | 1 | 557 | 0.0 | 796 |
MS.gene068447.t1 | MTR_6g039440 | 67.806 | 556 | 176 | 1 | 1 | 556 | 1 | 553 | 0.0 | 796 |
MS.gene068447.t1 | MTR_4g048460 | 66.485 | 549 | 184 | 0 | 8 | 556 | 13 | 561 | 0.0 | 770 |
MS.gene068447.t1 | MTR_3g464190 | 65.350 | 557 | 192 | 1 | 1 | 556 | 1 | 557 | 0.0 | 770 |
MS.gene068447.t1 | MTR_5g073200 | 66.667 | 546 | 181 | 1 | 12 | 556 | 4 | 549 | 0.0 | 754 |
MS.gene068447.t1 | MTR_5g094620 | 63.309 | 556 | 185 | 1 | 1 | 556 | 1 | 537 | 0.0 | 745 |
MS.gene068447.t1 | MTR_5g073260 | 64.652 | 546 | 191 | 2 | 13 | 556 | 7 | 552 | 0.0 | 742 |
MS.gene068447.t1 | MTR_4g081460 | 57.455 | 550 | 231 | 2 | 9 | 556 | 14 | 562 | 0.0 | 666 |
MS.gene068447.t1 | MTR_4g048460 | 65.784 | 453 | 155 | 0 | 7 | 459 | 12 | 464 | 0.0 | 624 |
MS.gene068447.t1 | MTR_6g008560 | 66.584 | 401 | 134 | 0 | 156 | 556 | 1 | 401 | 0.0 | 577 |
MS.gene068447.t1 | MTR_2g082010 | 43.978 | 548 | 301 | 6 | 13 | 556 | 23 | 568 | 4.65e-172 | 499 |
MS.gene068447.t1 | MTR_2g081980 | 45.255 | 548 | 292 | 8 | 15 | 556 | 12 | 557 | 8.59e-172 | 498 |
MS.gene068447.t1 | MTR_8g007515 | 44.545 | 550 | 297 | 6 | 13 | 556 | 9 | 556 | 7.17e-168 | 488 |
MS.gene068447.t1 | MTR_2g082060 | 41.312 | 564 | 310 | 9 | 1 | 556 | 3 | 553 | 1.21e-156 | 459 |
MS.gene068447.t1 | MTR_4g019550 | 40.868 | 553 | 303 | 8 | 15 | 556 | 19 | 558 | 4.45e-143 | 424 |
MS.gene068447.t1 | MTR_2g082050 | 38.252 | 515 | 257 | 9 | 43 | 554 | 1 | 457 | 6.26e-122 | 367 |
MS.gene068447.t1 | MTR_4g045810 | 34.432 | 546 | 347 | 4 | 13 | 554 | 41 | 579 | 2.04e-112 | 347 |
MS.gene068447.t1 | MTR_2g064425 | 36.229 | 541 | 333 | 8 | 17 | 554 | 53 | 584 | 2.50e-104 | 326 |
MS.gene068447.t1 | MTR_2g089130 | 34.545 | 495 | 308 | 5 | 44 | 534 | 62 | 544 | 3.06e-101 | 317 |
MS.gene068447.t1 | MTR_2g089120 | 33.855 | 511 | 319 | 7 | 49 | 554 | 67 | 563 | 3.91e-99 | 311 |
MS.gene068447.t1 | MTR_8g057020 | 32.724 | 547 | 359 | 6 | 10 | 554 | 48 | 587 | 1.47e-96 | 306 |
MS.gene068447.t1 | MTR_2g064425 | 34.566 | 541 | 327 | 9 | 17 | 554 | 53 | 569 | 2.78e-94 | 299 |
MS.gene068447.t1 | MTR_2g065450 | 32.299 | 548 | 358 | 7 | 10 | 554 | 51 | 588 | 2.79e-91 | 292 |
MS.gene068447.t1 | MTR_4g092020 | 32.877 | 511 | 330 | 6 | 44 | 550 | 64 | 565 | 6.17e-87 | 280 |
MS.gene068447.t1 | MTR_2g064425 | 42.265 | 362 | 199 | 6 | 17 | 376 | 53 | 406 | 3.63e-85 | 271 |
MS.gene068447.t1 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 385 | 556 | 1 | 172 | 4.84e-84 | 259 |
MS.gene068447.t1 | MTR_7g010710 | 30.590 | 559 | 377 | 7 | 1 | 554 | 1 | 553 | 3.76e-83 | 270 |
MS.gene068447.t1 | MTR_4g092010 | 31.076 | 502 | 332 | 7 | 55 | 548 | 61 | 556 | 2.66e-80 | 263 |
MS.gene068447.t1 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 385 | 556 | 1 | 169 | 1.63e-77 | 242 |
MS.gene068447.t1 | MTR_2g064425 | 39.779 | 362 | 193 | 7 | 17 | 376 | 53 | 391 | 3.47e-75 | 245 |
MS.gene068447.t1 | MTR_5g094530 | 56.621 | 219 | 57 | 4 | 166 | 381 | 1 | 184 | 6.56e-75 | 236 |
MS.gene068447.t1 | MTR_2g010960 | 28.571 | 518 | 345 | 8 | 47 | 547 | 9 | 518 | 1.58e-69 | 233 |
MS.gene068447.t1 | MTR_6g064980 | 29.495 | 495 | 336 | 8 | 54 | 539 | 13 | 503 | 7.34e-67 | 226 |
MS.gene068447.t1 | MTR_3g465090 | 29.569 | 487 | 336 | 6 | 54 | 534 | 13 | 498 | 8.32e-67 | 226 |
MS.gene068447.t1 | MTR_3g063170 | 29.278 | 485 | 330 | 8 | 54 | 529 | 13 | 493 | 5.49e-66 | 223 |
MS.gene068447.t1 | MTR_3g063120 | 28.513 | 491 | 340 | 8 | 68 | 550 | 1 | 488 | 8.79e-65 | 219 |
MS.gene068447.t1 | MTR_3g052120 | 28.968 | 504 | 347 | 9 | 54 | 550 | 13 | 512 | 4.77e-63 | 215 |
MS.gene068447.t1 | MTR_3g063140 | 28.776 | 490 | 336 | 8 | 54 | 534 | 13 | 498 | 7.72e-63 | 215 |
MS.gene068447.t1 | MTR_7g050990 | 60.606 | 165 | 54 | 2 | 200 | 364 | 28 | 181 | 1.35e-56 | 204 |
MS.gene068447.t1 | MTR_6g065040 | 28.753 | 393 | 269 | 6 | 145 | 529 | 2 | 391 | 2.67e-53 | 186 |
MS.gene068447.t1 | MTR_3g015080 | 47.674 | 172 | 52 | 2 | 385 | 556 | 1 | 134 | 3.78e-46 | 158 |
MS.gene068447.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 65 | 569 | 2.31e-36 | 143 |
MS.gene068447.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 256 | 760 | 5.75e-36 | 143 |
MS.gene068447.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 276 | 780 | 6.00e-36 | 143 |
MS.gene068447.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 269 | 773 | 6.23e-36 | 143 |
MS.gene068447.t1 | MTR_2g064295 | 24.138 | 522 | 342 | 16 | 70 | 554 | 256 | 760 | 3.75e-34 | 138 |
MS.gene068447.t1 | MTR_3g063160 | 30.935 | 278 | 187 | 5 | 54 | 328 | 13 | 288 | 1.14e-33 | 130 |
MS.gene068447.t1 | MTR_3g058160 | 24.630 | 540 | 338 | 16 | 70 | 554 | 276 | 801 | 2.79e-33 | 135 |
MS.gene068447.t1 | MTR_2g012870 | 23.744 | 577 | 392 | 18 | 10 | 554 | 194 | 754 | 4.19e-30 | 125 |
MS.gene068447.t1 | MTR_2g012900 | 24.138 | 522 | 335 | 19 | 10 | 486 | 194 | 699 | 1.75e-27 | 117 |
MS.gene068447.t1 | MTR_7g011663 | 28.832 | 274 | 163 | 6 | 68 | 310 | 344 | 616 | 6.18e-22 | 100 |
MS.gene068447.t1 | MTR_7g094970 | 26.182 | 275 | 171 | 6 | 68 | 313 | 206 | 477 | 1.04e-21 | 99.8 |
MS.gene068447.t1 | MTR_5g030050 | 27.273 | 264 | 159 | 7 | 73 | 312 | 3 | 257 | 4.10e-19 | 89.0 |
MS.gene068447.t1 | MTR_7g011770 | 27.636 | 275 | 167 | 7 | 68 | 311 | 240 | 513 | 5.85e-19 | 91.3 |
MS.gene068447.t1 | MTR_5g081730 | 39.583 | 96 | 58 | 0 | 162 | 257 | 16 | 111 | 3.04e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068447.t1 | AT5G23960 | 39.201 | 551 | 320 | 7 | 13 | 556 | 3 | 545 | 1.31e-143 | 426 |
MS.gene068447.t1 | AT5G23960 | 39.170 | 554 | 318 | 9 | 13 | 556 | 3 | 547 | 1.53e-142 | 423 |
MS.gene068447.t1 | AT1G70080 | 36.709 | 553 | 340 | 7 | 8 | 552 | 57 | 607 | 4.40e-128 | 388 |
MS.gene068447.t1 | AT3G14490 | 37.729 | 546 | 330 | 5 | 17 | 556 | 60 | 601 | 7.60e-127 | 384 |
MS.gene068447.t1 | AT3G14520 | 36.414 | 541 | 334 | 5 | 22 | 556 | 68 | 604 | 5.22e-125 | 380 |
MS.gene068447.t1 | AT1G31950 | 35.949 | 548 | 328 | 6 | 22 | 556 | 70 | 607 | 6.40e-123 | 374 |
MS.gene068447.t1 | AT3G14540 | 36.667 | 540 | 334 | 4 | 22 | 556 | 65 | 601 | 1.77e-122 | 373 |
MS.gene068447.t1 | AT1G31950 | 36.229 | 541 | 335 | 5 | 22 | 556 | 70 | 606 | 3.05e-122 | 373 |
MS.gene068447.t1 | AT3G29410 | 35.240 | 542 | 347 | 3 | 17 | 556 | 64 | 603 | 1.18e-117 | 361 |
MS.gene068447.t1 | AT5G44630 | 35.401 | 548 | 337 | 8 | 18 | 554 | 14 | 555 | 5.48e-115 | 352 |
MS.gene068447.t1 | AT3G32030 | 33.393 | 560 | 359 | 7 | 2 | 556 | 54 | 604 | 8.11e-115 | 353 |
MS.gene068447.t1 | AT1G33750 | 34.206 | 535 | 346 | 4 | 24 | 556 | 73 | 603 | 1.24e-113 | 350 |
MS.gene068447.t1 | AT3G29410 | 35.600 | 500 | 318 | 3 | 59 | 556 | 1 | 498 | 4.54e-112 | 343 |
MS.gene068447.t1 | AT4G20210 | 33.938 | 551 | 345 | 8 | 17 | 556 | 58 | 600 | 5.47e-112 | 346 |
MS.gene068447.t1 | AT4G13300 | 34.508 | 539 | 342 | 7 | 25 | 556 | 20 | 554 | 2.75e-110 | 340 |
MS.gene068447.t1 | AT4G20200 | 35.125 | 521 | 318 | 9 | 48 | 556 | 92 | 604 | 5.25e-109 | 338 |
MS.gene068447.t1 | AT4G15870 | 34.381 | 541 | 329 | 9 | 25 | 556 | 75 | 598 | 2.83e-107 | 334 |
MS.gene068447.t1 | AT3G14540 | 38.117 | 446 | 269 | 3 | 22 | 463 | 65 | 507 | 4.77e-105 | 325 |
MS.gene068447.t1 | AT4G13280 | 33.892 | 537 | 344 | 7 | 27 | 556 | 22 | 554 | 5.81e-105 | 327 |
MS.gene068447.t1 | AT1G31950 | 36.933 | 463 | 269 | 6 | 22 | 471 | 70 | 522 | 8.17e-105 | 325 |
MS.gene068447.t1 | AT3G29190 | 33.142 | 522 | 327 | 8 | 48 | 556 | 89 | 601 | 1.63e-103 | 324 |
MS.gene068447.t1 | AT2G23230 | 33.636 | 550 | 350 | 9 | 16 | 555 | 55 | 599 | 8.03e-101 | 317 |
MS.gene068447.t1 | AT3G29110 | 34.191 | 544 | 349 | 8 | 17 | 554 | 55 | 595 | 8.40e-101 | 317 |
MS.gene068447.t1 | AT4G20230 | 32.588 | 537 | 348 | 8 | 25 | 552 | 70 | 601 | 1.68e-100 | 317 |
MS.gene068447.t1 | AT4G20230 | 32.588 | 537 | 348 | 8 | 25 | 552 | 82 | 613 | 2.45e-100 | 317 |
MS.gene068447.t1 | AT2G23230 | 33.455 | 550 | 346 | 10 | 16 | 555 | 55 | 594 | 3.22e-98 | 310 |
MS.gene068447.t1 | AT1G66020 | 32.477 | 545 | 353 | 7 | 17 | 552 | 56 | 594 | 2.05e-96 | 305 |
MS.gene068447.t1 | AT1G48800 | 31.868 | 546 | 356 | 9 | 17 | 552 | 63 | 602 | 1.98e-94 | 300 |
MS.gene068447.t1 | AT4G16730 | 32.386 | 528 | 335 | 9 | 42 | 554 | 17 | 537 | 2.62e-94 | 298 |
MS.gene068447.t1 | AT4G13280 | 32.961 | 537 | 319 | 9 | 27 | 556 | 22 | 524 | 3.87e-93 | 295 |
MS.gene068447.t1 | AT4G16730 | 32.665 | 499 | 315 | 8 | 73 | 556 | 1 | 493 | 3.50e-91 | 289 |
MS.gene068447.t1 | AT1G61680 | 32.665 | 499 | 324 | 4 | 54 | 546 | 77 | 569 | 1.11e-87 | 282 |
MS.gene068447.t1 | AT4G16740 | 31.655 | 556 | 353 | 13 | 14 | 556 | 23 | 564 | 8.98e-87 | 280 |
MS.gene068447.t1 | AT2G24210 | 30.893 | 560 | 366 | 11 | 10 | 556 | 39 | 590 | 4.32e-86 | 278 |
MS.gene068447.t1 | AT1G61680 | 32.265 | 499 | 319 | 5 | 54 | 546 | 77 | 562 | 8.07e-85 | 274 |
MS.gene068447.t1 | AT5G48110 | 37.318 | 343 | 210 | 5 | 215 | 556 | 1 | 339 | 7.98e-84 | 265 |
MS.gene068447.t1 | AT1G48820 | 30.983 | 539 | 322 | 11 | 17 | 549 | 63 | 557 | 1.52e-83 | 271 |
MS.gene068447.t1 | AT3G25830 | 29.676 | 556 | 371 | 12 | 15 | 556 | 45 | 594 | 4.84e-79 | 260 |
MS.gene068447.t1 | AT3G25820 | 29.676 | 556 | 371 | 12 | 15 | 556 | 45 | 594 | 4.84e-79 | 260 |
MS.gene068447.t1 | AT3G25810 | 30.427 | 562 | 362 | 12 | 15 | 556 | 45 | 597 | 8.06e-79 | 259 |
MS.gene068447.t1 | AT1G66020 | 34.677 | 372 | 228 | 7 | 17 | 379 | 56 | 421 | 8.42e-67 | 223 |
MS.gene068447.t1 | AT4G16740 | 34.211 | 380 | 227 | 9 | 14 | 381 | 23 | 391 | 8.68e-67 | 222 |
MS.gene068447.t1 | AT3G25820 | 31.593 | 383 | 249 | 8 | 15 | 389 | 45 | 422 | 6.35e-61 | 208 |
MS.gene068447.t1 | AT4G16740 | 33.841 | 328 | 197 | 7 | 14 | 330 | 23 | 341 | 6.95e-56 | 192 |
MS.gene068447.t1 | AT4G16740 | 33.841 | 328 | 197 | 7 | 14 | 330 | 23 | 341 | 6.95e-56 | 192 |
MS.gene068447.t1 | AT3G25820 | 31.889 | 323 | 209 | 6 | 15 | 330 | 45 | 363 | 3.89e-52 | 183 |
MS.gene068447.t1 | AT3G25820 | 31.889 | 323 | 209 | 6 | 15 | 330 | 45 | 363 | 3.89e-52 | 183 |
MS.gene068447.t1 | AT1G79460 | 25.437 | 515 | 331 | 19 | 70 | 546 | 274 | 773 | 8.94e-31 | 127 |
MS.gene068447.t1 | AT1G61120 | 23.379 | 509 | 354 | 10 | 71 | 556 | 289 | 784 | 4.13e-26 | 114 |
MS.gene068447.t1 | AT4G02780 | 28.462 | 260 | 158 | 5 | 68 | 300 | 329 | 587 | 4.99e-22 | 100 |
Find 95 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6.3:+64635935 | MS.gene068447:CDS |
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6.3:+64636852 | MS.gene068447:CDS |
TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6.3:+64635936 | MS.gene068447:CDS |
TCCTTATGCTTCAGATTCTA+TGG | 0.234780 | 6.3:+64635328 | MS.gene068447:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6.3:-64637124 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6.3:-64636840 | None:intergenic |
TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6.3:+64635886 | MS.gene068447:CDS |
CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6.3:+64638595 | MS.gene068447:CDS |
AGCCTGCATCAAAAGGAATT+TGG | 0.290423 | 6.3:+64636892 | MS.gene068447:CDS |
AGACGAAATTAATCAAGTTT+TGG | 0.294333 | 6.3:+64635855 | MS.gene068447:CDS |
ATCAAGTGGTTACCCAGTTT+TGG | 0.294586 | 6.3:+64638485 | MS.gene068447:CDS |
TAAGAAGTCGTAGCCAAAAC+TGG | 0.310089 | 6.3:-64638498 | None:intergenic |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6.3:-64637166 | None:intergenic |
CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6.3:+64635291 | MS.gene068447:CDS |
AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6.3:+64635292 | MS.gene068447:CDS |
AGAAATATTGGAAGAGGCTT+TGG | 0.332398 | 6.3:+64636666 | MS.gene068447:CDS |
TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6.3:-64635257 | None:intergenic |
TAATTGTTTGGAGGATCTTC+CGG | 0.336043 | 6.3:+64637516 | MS.gene068447:CDS |
TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6.3:+64638797 | MS.gene068447:CDS |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6.3:-64636564 | None:intergenic |
GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6.3:+64637079 | MS.gene068447:CDS |
ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6.3:+64638589 | MS.gene068447:CDS |
TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6.3:-64635715 | None:intergenic |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6.3:+64638765 | MS.gene068447:CDS |
TAGGTGGGATATTAATTGTT+TGG | 0.362389 | 6.3:+64637504 | MS.gene068447:intron |
CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6.3:+64635250 | MS.gene068447:CDS |
GATTGATTCAATATGTCGTT+TGG | 0.383797 | 6.3:+64635813 | MS.gene068447:CDS |
GGTTCATGGTGAAGAAATAT+TGG | 0.385958 | 6.3:+64636654 | MS.gene068447:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6.3:-64636839 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6.3:+64638779 | MS.gene068447:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6.3:-64636818 | None:intergenic |
CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6.3:+64638541 | MS.gene068447:CDS |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6.3:+64637549 | MS.gene068447:CDS |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6.3:-64638450 | None:intergenic |
TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6.3:-64637535 | None:intergenic |
ATAAATACTCAAATTTCTAA+AGG | 0.433133 | 6.3:-64639030 | None:intergenic |
TATGATGCATATGGAACTAT+TGG | 0.436677 | 6.3:+64637192 | MS.gene068447:CDS |
GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6.3:+64638542 | MS.gene068447:CDS |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6.3:+64638842 | MS.gene068447:CDS |
TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6.3:+64638596 | MS.gene068447:CDS |
ATTGATTCAATATGTCGTTT+GGG | 0.450241 | 6.3:+64635814 | MS.gene068447:CDS |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6.3:+64638509 | MS.gene068447:CDS |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6.3:-64638424 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6.3:+64636843 | MS.gene068447:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6.3:+64638510 | MS.gene068447:CDS |
GCTCCAAAGCCTGCATCAAA+AGG | 0.461740 | 6.3:+64636885 | MS.gene068447:CDS |
GATGACACATATGATGCATA+TGG | 0.467097 | 6.3:+64637183 | MS.gene068447:CDS |
GAGGGAATATGATATGAATA+GGG | 0.475500 | 6.3:+64638798 | MS.gene068447:CDS |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6.3:-64636723 | None:intergenic |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6.3:+64638858 | MS.gene068447:CDS |
GTGGGATATTAATTGTTTGG+AGG | 0.494315 | 6.3:+64637507 | MS.gene068447:CDS |
ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6.3:-64637109 | None:intergenic |
TTCTGGTCACCTTGAGTCGA+TGG | 0.501829 | 6.3:+64636696 | MS.gene068447:CDS |
CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6.3:+64635944 | MS.gene068447:CDS |
TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6.3:-64638910 | None:intergenic |
TGGTGAAGAAATATTGGAAG+AGG | 0.510576 | 6.3:+64636660 | MS.gene068447:CDS |
ACCATAGAATCTGAAGCATA+AGG | 0.512185 | 6.3:-64635329 | None:intergenic |
CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6.3:+64635970 | MS.gene068447:CDS |
ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6.3:+64637023 | MS.gene068447:intron |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6.3:-64636790 | None:intergenic |
GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6.3:+64636640 | MS.gene068447:CDS |
AGATGCGTTCAACCAATTCA+AGG | 0.526513 | 6.3:+64636552 | MS.gene068447:intron |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6.3:-64638404 | None:intergenic |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6.3:-64637123 | None:intergenic |
ATAGGTAACGGAACTTCAGT+TGG | 0.538099 | 6.3:-64638892 | None:intergenic |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6.3:+64638745 | MS.gene068447:intron |
AACATTGGTCGTAGATGTTG+AGG | 0.541350 | 6.3:+64636597 | MS.gene068447:CDS |
GCATGAAGCCTCACATATGA+TGG | 0.546228 | 6.3:+64636633 | MS.gene068447:CDS |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6.3:-64636722 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6.3:+64637121 | MS.gene068447:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6.3:+64638409 | MS.gene068447:CDS |
TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6.3:+64635952 | MS.gene068447:CDS |
TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6.3:-64636733 | None:intergenic |
ATCGGGTGGCCATCGACTCA+AGG | 0.563910 | 6.3:-64636705 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6.3:+64638780 | MS.gene068447:CDS |
ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6.3:-64635930 | None:intergenic |
CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6.3:+64637017 | MS.gene068447:intron |
AGGAAACTTCAGTGAAACAT+TGG | 0.587870 | 6.3:+64636582 | MS.gene068447:CDS |
ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6.3:-64637063 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6.3:+64638471 | MS.gene068447:CDS |
GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6.3:+64635293 | MS.gene068447:CDS |
AAGAAGTCGTAGCCAAAACT+GGG | 0.599671 | 6.3:-64638497 | None:intergenic |
AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6.3:-64635298 | None:intergenic |
TTGGCTACGACTTCTTACAT+TGG | 0.608393 | 6.3:+64638504 | MS.gene068447:CDS |
GATAACTACACACACTCTGA+CGG | 0.610210 | 6.3:+64638970 | MS.gene068447:CDS |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6.3:+64636562 | MS.gene068447:CDS |
ACATTGGTCGTAGATGTTGA+GGG | 0.633793 | 6.3:+64636598 | MS.gene068447:CDS |
GAGCAAGAAATGAAGAAACA+AGG | 0.635943 | 6.3:+64637589 | MS.gene068447:CDS |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6.3:+64638401 | MS.gene068447:CDS |
ACCATGAACCATCATATGTG+AGG | 0.665974 | 6.3:-64636641 | None:intergenic |
GGATGAAATTGTGTCAAGCG+AGG | 0.666273 | 6.3:+64638617 | MS.gene068447:CDS |
ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6.3:-64638904 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6.3:-64636719 | None:intergenic |
GGAACCTGATATGAATACTG+CGG | 0.696636 | 6.3:+64635711 | MS.gene068447:intron |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6.3:+64638440 | MS.gene068447:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAACCATTTA+AGG | - | chr6.3:64635437-64635456 | None:intergenic | 10.0% |
!! | ATAATAAATGAATCATTAAT+GGG | - | chr6.3:64636016-64636035 | None:intergenic | 10.0% |
!! | CATATAAAATAAATGTTAAT+AGG | - | chr6.3:64638355-64638374 | None:intergenic | 10.0% |
!! | GAAAAAAAATTACATAAAAT+AGG | + | chr6.3:64636222-64636241 | MS.gene068447:intron | 10.0% |
!! | TGATTATAAAGTAATATTAA+TGG | + | chr6.3:64636337-64636356 | MS.gene068447:intron | 10.0% |
!!! | AATTTCATTTAAATTTTTTG+TGG | + | chr6.3:64637747-64637766 | MS.gene068447:intron | 10.0% |
!!! | CATTTATTATGTTTTTAATT+TGG | + | chr6.3:64636026-64636045 | MS.gene068447:intron | 10.0% |
!!! | CTATTAACATTTATTTTATA+TGG | + | chr6.3:64638353-64638372 | MS.gene068447:intron | 10.0% |
!!! | TAATTACATAGTTTTTTTTT+TGG | + | chr6.3:64638322-64638341 | MS.gene068447:intron | 10.0% |
!! | ACAAATTGATAAACTAAAAA+AGG | + | chr6.3:64635735-64635754 | MS.gene068447:CDS | 15.0% |
!! | ATGAGTAAATAAATAGTATA+AGG | - | chr6.3:64635573-64635592 | None:intergenic | 15.0% |
!! | CATAATAAATGAATCATTAA+TGG | - | chr6.3:64636017-64636036 | None:intergenic | 15.0% |
!! | TAATATGAATGTCTAAAAAA+TGG | + | chr6.3:64636153-64636172 | MS.gene068447:intron | 15.0% |
!! | TATAAAGACAAAAATAGTAT+AGG | - | chr6.3:64637004-64637023 | None:intergenic | 15.0% |
!!! | AAACATTTTTACATCATTTT+AGG | + | chr6.3:64637848-64637867 | MS.gene068447:intron | 15.0% |
!!! | ATTGTTGTTTAATATTATTG+TGG | + | chr6.3:64636511-64636530 | MS.gene068447:intron | 15.0% |
!! | AAAAAAGGTTCTTACTTAAT+AGG | - | chr6.3:64636377-64636396 | None:intergenic | 20.0% |
!! | AACTCAGTTAATAAAATTCA+TGG | - | chr6.3:64638006-64638025 | None:intergenic | 20.0% |
!! | AATTGATAAACTAAAAAAGG+AGG | + | chr6.3:64635738-64635757 | MS.gene068447:CDS | 20.0% |
!! | TCGTAGAATTAATATTACAA+AGG | - | chr6.3:64638228-64638247 | None:intergenic | 20.0% |
!! | TTGAGTAAAACAAATTAGAT+CGG | + | chr6.3:64636057-64636076 | MS.gene068447:intron | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | + | chr6.3:64637489-64637508 | MS.gene068447:intron | 20.0% |
!!! | AATTCTCTTTTTACTAAAAG+TGG | - | chr6.3:64636183-64636202 | None:intergenic | 20.0% |
!!! | AATTTTTTGTGGTTATCAAA+TGG | + | chr6.3:64637758-64637777 | MS.gene068447:intron | 20.0% |
!!! | CTATTTTTGTCTTTATATAC+AGG | + | chr6.3:64637007-64637026 | MS.gene068447:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAC+TGG | + | chr6.3:64638254-64638273 | MS.gene068447:intron | 20.0% |
!!! | TATTGTTTATCTCTAAAGTT+TGG | - | chr6.3:64637298-64637317 | None:intergenic | 20.0% |
!!! | TGAATTAGAACTTTTTACTA+AGG | + | chr6.3:64637215-64637234 | MS.gene068447:CDS | 20.0% |
!!! | TGATTCTTTTAATAGAGTAA+TGG | + | chr6.3:64637456-64637475 | MS.gene068447:intron | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | + | chr6.3:64637485-64637504 | MS.gene068447:intron | 20.0% |
! | AAGAAAAATGTATCATCATG+AGG | + | chr6.3:64638063-64638082 | MS.gene068447:intron | 25.0% |
! | AATATATCCATCTTCAATCT+TGG | + | chr6.3:64637371-64637390 | MS.gene068447:intron | 25.0% |
! | AATATTAATGGCATACATGT+AGG | + | chr6.3:64636349-64636368 | MS.gene068447:intron | 25.0% |
! | AATTCTTTAAATCAACAGCA+AGG | + | chr6.3:64635356-64635375 | MS.gene068447:intron | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | - | chr6.3:64636843-64636862 | None:intergenic | 25.0% |
! | GAGAATAATTAAAAGAGATG+AGG | - | chr6.3:64636275-64636294 | None:intergenic | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | - | chr6.3:64637169-64637188 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | + | chr6.3:64636843-64636862 | MS.gene068447:CDS | 25.0% |
! | TACAAGAGTTATGTTCAAAA+TGG | + | chr6.3:64635886-64635905 | MS.gene068447:CDS | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | - | chr6.3:64636842-64636861 | None:intergenic | 25.0% |
! | TTCAATCAAATAACTTCATG+AGG | - | chr6.3:64637924-64637943 | None:intergenic | 25.0% |
!! | AGACGAAATTAATCAAGTTT+TGG | + | chr6.3:64635855-64635874 | MS.gene068447:CDS | 25.0% |
!! | ATTGATTCAATATGTCGTTT+GGG | + | chr6.3:64635814-64635833 | MS.gene068447:CDS | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | + | chr6.3:64636122-64636141 | MS.gene068447:intron | 25.0% |
!! | TAAGTTGAGATATATATACC+AGG | - | chr6.3:64635991-64636010 | None:intergenic | 25.0% |
!! | TCTTTAATCTAGTTTAGAGT+TGG | + | chr6.3:64637327-64637346 | MS.gene068447:intron | 25.0% |
!! | TTTTTACTAAGGCAATTGAA+AGG | + | chr6.3:64637226-64637245 | MS.gene068447:CDS | 25.0% |
!! | TTTTTGTCTTTATATACAGG+TGG | + | chr6.3:64637010-64637029 | MS.gene068447:intron | 25.0% |
!!! | AACTCTTACTTCTTTTAAGA+AGG | - | chr6.3:64637635-64637654 | None:intergenic | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+GGG | - | chr6.3:64637634-64637653 | None:intergenic | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | + | chr6.3:64637488-64637507 | MS.gene068447:intron | 25.0% |
!!! | TGTATGTTTTGAATACATAC+AGG | + | chr6.3:64635690-64635709 | MS.gene068447:intron | 25.0% |
AAAAGAAAATTGACAACGCT+TGG | + | chr6.3:64638842-64638861 | MS.gene068447:CDS | 30.0% | |
AAACTGAGTTCATATAACCA+TGG | - | chr6.3:64638162-64638181 | None:intergenic | 30.0% | |
ACGCATAACAAAACCTTAAA+TGG | + | chr6.3:64635421-64635440 | MS.gene068447:intron | 30.0% | |
ATATTGGGGCTCAAAATATA+CGG | - | chr6.3:64637112-64637131 | None:intergenic | 30.0% | |
CACATATCAACAATATCAAG+TGG | + | chr6.3:64638471-64638490 | MS.gene068447:CDS | 30.0% | |
CATCAATCCTAATGAGAAAT+CGG | + | chr6.3:64635250-64635269 | MS.gene068447:CDS | 30.0% | |
GACAAAAGACATCTTTGATT+GGG | + | chr6.3:64638542-64638561 | MS.gene068447:CDS | 30.0% | |
GAGGGAATATGATATGAATA+GGG | + | chr6.3:64638798-64638817 | MS.gene068447:CDS | 30.0% | |
GGAATGAAACTTGATATTCT+AGG | + | chr6.3:64635468-64635487 | MS.gene068447:intron | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | + | chr6.3:64638780-64638799 | MS.gene068447:CDS | 30.0% | |
TAAAGCAACTTCATGTAATC+CGG | - | chr6.3:64637538-64637557 | None:intergenic | 30.0% | |
TAACTATATACCAACAACAG+AGG | + | chr6.3:64638440-64638459 | MS.gene068447:CDS | 30.0% | |
TAGGTGGGATATTAATTGTT+TGG | + | chr6.3:64637504-64637523 | MS.gene068447:intron | 30.0% | |
TATGATGCATATGGAACTAT+TGG | + | chr6.3:64637192-64637211 | MS.gene068447:CDS | 30.0% | |
TGAGGGAATATGATATGAAT+AGG | + | chr6.3:64638797-64638816 | MS.gene068447:CDS | 30.0% | |
TGCAAAAAACTTATTGTCCA+TGG | + | chr6.3:64638142-64638161 | MS.gene068447:intron | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | - | chr6.3:64637127-64637146 | None:intergenic | 30.0% | |
! | AAAGTATCACCATAATCACT+TGG | + | chr6.3:64637883-64637902 | MS.gene068447:intron | 30.0% |
! | ATGACACTTAATTGCTGTTA+TGG | - | chr6.3:64635646-64635665 | None:intergenic | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | + | chr6.3:64636121-64636140 | MS.gene068447:intron | 30.0% |
! | GATTGATTCAATATGTCGTT+TGG | + | chr6.3:64635813-64635832 | MS.gene068447:CDS | 30.0% |
! | GTTGCTTTATAAATCACTCT+TGG | + | chr6.3:64637549-64637568 | MS.gene068447:CDS | 30.0% |
! | TCATGAGGATACATTTTTCT+TGG | - | chr6.3:64637909-64637928 | None:intergenic | 30.0% |
! | TTTCTTTTGGCATTCTTGAA+TGG | - | chr6.3:64638830-64638849 | None:intergenic | 30.0% |
! | TTTTCCTTGCTTGAGAATAT+TGG | - | chr6.3:64637128-64637147 | None:intergenic | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | - | chr6.3:64638843-64638862 | None:intergenic | 30.0% |
!! | CTCTTACTTCTTTTAAGAAG+GGG | - | chr6.3:64637633-64637652 | None:intergenic | 30.0% |
!! | GTGTTTCTGAAGTACAAAAA+AGG | - | chr6.3:64636392-64636411 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+TGG | - | chr6.3:64635797-64635816 | None:intergenic | 30.0% |
!!! | AGTAGTAGAATGTTGCTTTT+GGG | + | chr6.3:64637080-64637099 | MS.gene068447:CDS | 30.0% |
!!! | ATCAAGTTGACTTTTTCCAT+GGG | - | chr6.3:64635796-64635815 | None:intergenic | 30.0% |
AAACAGTTTGAGCAGAAAAG+AGG | + | chr6.3:64638745-64638764 | MS.gene068447:intron | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | + | chr6.3:64638401-64638420 | MS.gene068447:CDS | 35.0% | |
AATCCTGGGCTAATATTAAG+TGG | - | chr6.3:64635533-64635552 | None:intergenic | 35.0% | |
AATGAGAGTAACTTGAATCC+TGG | - | chr6.3:64635548-64635567 | None:intergenic | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | + | chr6.3:64638510-64638529 | MS.gene068447:CDS | 35.0% | |
AGAAATATTGGAAGAGGCTT+TGG | + | chr6.3:64636666-64636685 | MS.gene068447:CDS | 35.0% | |
AGGAAACTTCAGTGAAACAT+TGG | + | chr6.3:64636582-64636601 | MS.gene068447:CDS | 35.0% | |
ATGAGAGTAACTTGAATCCT+GGG | - | chr6.3:64635547-64635566 | None:intergenic | 35.0% | |
CGACAAAAGACATCTTTGAT+TGG | + | chr6.3:64638541-64638560 | MS.gene068447:CDS | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | + | chr6.3:64638858-64638877 | MS.gene068447:CDS | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | + | chr6.3:64638779-64638798 | MS.gene068447:CDS | 35.0% | |
CTCAAAAACAAAGAAACCCA+TGG | + | chr6.3:64635777-64635796 | MS.gene068447:CDS | 35.0% | |
GAGCAAGAAATGAAGAAACA+AGG | + | chr6.3:64637589-64637608 | MS.gene068447:CDS | 35.0% | |
GATGACACATATGATGCATA+TGG | + | chr6.3:64637183-64637202 | MS.gene068447:CDS | 35.0% | |
GGTTCATGGTGAAGAAATAT+TGG | + | chr6.3:64636654-64636673 | MS.gene068447:CDS | 35.0% | |
GTGGGATATTAATTGTTTGG+AGG | + | chr6.3:64637507-64637526 | MS.gene068447:CDS | 35.0% | |
TAACCACTTAATATTAGCCC+AGG | + | chr6.3:64635527-64635546 | MS.gene068447:intron | 35.0% | |
TAATTGTTTGGAGGATCTTC+CGG | + | chr6.3:64637516-64637535 | MS.gene068447:CDS | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | + | chr6.3:64638509-64638528 | MS.gene068447:CDS | 35.0% | |
TCCTTATGCTTCAGATTCTA+TGG | + | chr6.3:64635328-64635347 | MS.gene068447:CDS | 35.0% | |
TGCTGTTATGGATCAACTTA+TGG | - | chr6.3:64635634-64635653 | None:intergenic | 35.0% | |
TGGTGAAGAAATATTGGAAG+AGG | + | chr6.3:64636660-64636679 | MS.gene068447:CDS | 35.0% | |
TTCCTTGCTTGAGAATATTG+GGG | - | chr6.3:64637126-64637145 | None:intergenic | 35.0% | |
TTGTCTTTATATACAGGTGG+TGG | + | chr6.3:64637013-64637032 | MS.gene068447:intron | 35.0% | |
TTTACTTGTGTTGCAAGAGA+AGG | - | chr6.3:64636736-64636755 | None:intergenic | 35.0% | |
! | ACCATAGAATCTGAAGCATA+AGG | - | chr6.3:64635332-64635351 | None:intergenic | 35.0% |
! | GCAGCAGCATTAACAATTTT+TGG | - | chr6.3:64638579-64638598 | None:intergenic | 35.0% |
! | TCTACTTGCATTGGCAAAAT+TGG | + | chr6.3:64636852-64636871 | MS.gene068447:CDS | 35.0% |
! | TGCAAAACCGATTTCTCATT+AGG | - | chr6.3:64635260-64635279 | None:intergenic | 35.0% |
! | TTCCAAATTCCTTTTGATGC+AGG | - | chr6.3:64636897-64636916 | None:intergenic | 35.0% |
! | TTTTCTTGGCCAAGTGATTA+TGG | - | chr6.3:64637895-64637914 | None:intergenic | 35.0% |
!! | ATTCTCTTGCTGTGCTATTT+AGG | + | chr6.3:64635935-64635954 | MS.gene068447:CDS | 35.0% |
!! | TTCTCTTGCTGTGCTATTTA+GGG | + | chr6.3:64635936-64635955 | MS.gene068447:CDS | 35.0% |
!! | TTCTTTTAAGAAGGGGTCAA+GGG | - | chr6.3:64637626-64637645 | None:intergenic | 35.0% |
!!! | GAGTAGTAGAATGTTGCTTT+TGG | + | chr6.3:64637079-64637098 | MS.gene068447:CDS | 35.0% |
AAAAAATCTCCCCAAACGCT+AGG | - | chr6.3:64635305-64635324 | None:intergenic | 40.0% | |
AAAAATCTCCCCAAACGCTA+GGG | - | chr6.3:64635304-64635323 | None:intergenic | 40.0% | |
AACATTGGTCGTAGATGTTG+AGG | + | chr6.3:64636597-64636616 | MS.gene068447:CDS | 40.0% | |
AAGAAGTCGTAGCCAAAACT+GGG | - | chr6.3:64638500-64638519 | None:intergenic | 40.0% | |
ACACACGTCAGAATAGGTAA+CGG | - | chr6.3:64638907-64638926 | None:intergenic | 40.0% | |
ACATTGGTCGTAGATGTTGA+GGG | + | chr6.3:64636598-64636617 | MS.gene068447:CDS | 40.0% | |
ACCATGAACCATCATATGTG+AGG | - | chr6.3:64636644-64636663 | None:intergenic | 40.0% | |
ACTACTCTATCTCGTGCATA+CGG | - | chr6.3:64637066-64637085 | None:intergenic | 40.0% | |
AGATGCGTTCAACCAATTCA+AGG | + | chr6.3:64636552-64636571 | MS.gene068447:intron | 40.0% | |
AGCCTGCATCAAAAGGAATT+TGG | + | chr6.3:64636892-64636911 | MS.gene068447:CDS | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | + | chr6.3:64638765-64638784 | MS.gene068447:CDS | 40.0% | |
ATAGCACAGCAAGAGAATGA+AGG | - | chr6.3:64635933-64635952 | None:intergenic | 40.0% | |
ATAGTTAGCATTCAGCCATC+TGG | - | chr6.3:64638427-64638446 | None:intergenic | 40.0% | |
GATAACTACACACACTCTGA+CGG | + | chr6.3:64638970-64638989 | MS.gene068447:CDS | 40.0% | |
GGAACCTGATATGAATACTG+CGG | + | chr6.3:64635711-64635730 | MS.gene068447:intron | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | - | chr6.3:64636821-64636840 | None:intergenic | 40.0% | |
TAAGAAGTCGTAGCCAAAAC+TGG | - | chr6.3:64638501-64638520 | None:intergenic | 40.0% | |
TGCTATACATTGCAGGCTTA+GGG | + | chr6.3:64638596-64638615 | MS.gene068447:CDS | 40.0% | |
TTAGCGACCAAGATTGAAGA+TGG | - | chr6.3:64637381-64637400 | None:intergenic | 40.0% | |
TTGAGAACACACGTCAGAAT+AGG | - | chr6.3:64638913-64638932 | None:intergenic | 40.0% | |
TTGCAAGAGAAGGACTCAAT+CGG | - | chr6.3:64636726-64636745 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | + | chr6.3:64638504-64638523 | MS.gene068447:CDS | 40.0% | |
! | ATCAAGTGGTTACCCAGTTT+TGG | + | chr6.3:64638485-64638504 | MS.gene068447:CDS | 40.0% |
! | ATTCCTTTTGATGCAGGCTT+TGG | - | chr6.3:64636891-64636910 | None:intergenic | 40.0% |
!! | ATAGGTAACGGAACTTCAGT+TGG | - | chr6.3:64638895-64638914 | None:intergenic | 40.0% |
!! | CAATCTCTCGCGTTTTATTG+AGG | + | chr6.3:64638930-64638949 | MS.gene068447:CDS | 40.0% |
!! | CTTCTTTTAAGAAGGGGTCA+AGG | - | chr6.3:64637627-64637646 | None:intergenic | 40.0% |
!! | CTTTATATACAGGTGGTGGA+AGG | + | chr6.3:64637017-64637036 | MS.gene068447:intron | 40.0% |
AACCAATTCAAGGACGAGCA+AGG | + | chr6.3:64636562-64636581 | MS.gene068447:CDS | 45.0% | |
AGATTTCCACCCTAGCGTTT+GGG | + | chr6.3:64635292-64635311 | MS.gene068447:CDS | 45.0% | |
AGCCCCAATATTCTCAAGCA+AGG | + | chr6.3:64637121-64637140 | MS.gene068447:CDS | 45.0% | |
ATGCTGCTGCTATACATTGC+AGG | + | chr6.3:64638589-64638608 | MS.gene068447:CDS | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | + | chr6.3:64636780-64636799 | MS.gene068447:CDS | 45.0% | |
CATGGACTTTACGTTTCACC+TGG | + | chr6.3:64635970-64635989 | MS.gene068447:CDS | 45.0% | |
CTGCTATACATTGCAGGCTT+AGG | + | chr6.3:64638595-64638614 | MS.gene068447:CDS | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | + | chr6.3:64638409-64638428 | MS.gene068447:CDS | 45.0% | |
GCATGAAGCCTCACATATGA+TGG | + | chr6.3:64636633-64636652 | MS.gene068447:CDS | 45.0% | |
GCCTCACATATGATGGTTCA+TGG | + | chr6.3:64636640-64636659 | MS.gene068447:CDS | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | + | chr6.3:64638617-64638636 | MS.gene068447:CDS | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | - | chr6.3:64636725-64636744 | None:intergenic | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | - | chr6.3:64638453-64638472 | None:intergenic | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | - | chr6.3:64638407-64638426 | None:intergenic | 45.0% | |
TGTGCCGCAGTATTCATATC+AGG | - | chr6.3:64635718-64635737 | None:intergenic | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | - | chr6.3:64636567-64636586 | None:intergenic | 45.0% | |
! | CTAGCCTAGGCAAGTTTTTG+CGG | - | chr6.3:64636780-64636799 | None:intergenic | 45.0% |
! | TAACTTCTTGCCACTAGCCT+AGG | - | chr6.3:64636793-64636812 | None:intergenic | 45.0% |
!! | CTGTGCTATTTAGGGTGTTG+AGG | + | chr6.3:64635944-64635963 | MS.gene068447:CDS | 45.0% |
!! | TTTAGGGTGTTGAGGCAACA+TGG | + | chr6.3:64635952-64635971 | MS.gene068447:CDS | 45.0% |
!!! | GAGGCTTTGGCTTTTACTTC+TGG | + | chr6.3:64636679-64636698 | MS.gene068447:CDS | 45.0% |
!!! | ATTTTATAATAATAAAAGAT+AGG | + | chr6.3:64636200-64636219 | MS.gene068447:intron | 5.0% |
!!! | TTTTTTTTTTTTTTATCAAT+AGG | + | chr6.3:64635447-64635466 | MS.gene068447:intron | 5.0% |
AAGAGAAGGACTCAATCGGG+TGG | - | chr6.3:64636722-64636741 | None:intergenic | 50.0% | |
CAGATTTCCACCCTAGCGTT+TGG | + | chr6.3:64635291-64635310 | MS.gene068447:CDS | 50.0% | |
CTCTCCGCAAAAACTTGCCT+AGG | + | chr6.3:64636773-64636792 | MS.gene068447:CDS | 50.0% | |
GATTTCCACCCTAGCGTTTG+GGG | + | chr6.3:64635293-64635312 | MS.gene068447:CDS | 50.0% | |
GCTCCAAAGCCTGCATCAAA+AGG | + | chr6.3:64636885-64636904 | MS.gene068447:CDS | 50.0% | |
TTCTGGTCACCTTGAGTCGA+TGG | + | chr6.3:64636696-64636715 | MS.gene068447:CDS | 50.0% | |
!! | ATACAGGTGGTGGAAGGAGT+TGG | + | chr6.3:64637023-64637042 | MS.gene068447:intron | 50.0% |
AATCTCCCCAAACGCTAGGG+TGG | - | chr6.3:64635301-64635320 | None:intergenic | 55.0% | |
!! | ATCGGGTGGCCATCGACTCA+AGG | - | chr6.3:64636708-64636727 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 64635233 | 64639044 | 64635233 | ID=MS.gene068447 |
chr6.3 | mRNA | 64635233 | 64639044 | 64635233 | ID=MS.gene068447.t1;Parent=MS.gene068447 |
chr6.3 | exon | 64635233 | 64635349 | 64635233 | ID=MS.gene068447.t1.exon1;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64635233 | 64635349 | 64635233 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64635712 | 64635991 | 64635712 | ID=MS.gene068447.t1.exon2;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64635712 | 64635991 | 64635712 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64636554 | 64636926 | 64636554 | ID=MS.gene068447.t1.exon3;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64636554 | 64636926 | 64636554 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64637029 | 64637247 | 64637029 | ID=MS.gene068447.t1.exon4;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64637029 | 64637247 | 64637029 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64637507 | 64637645 | 64637507 | ID=MS.gene068447.t1.exon5;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64637507 | 64637645 | 64637507 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64638390 | 64638638 | 64638390 | ID=MS.gene068447.t1.exon6;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64638390 | 64638638 | 64638390 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
chr6.3 | exon | 64638751 | 64639044 | 64638751 | ID=MS.gene068447.t1.exon7;Parent=MS.gene068447.t1 |
chr6.3 | CDS | 64638751 | 64639044 | 64638751 | ID=cds.MS.gene068447.t1;Parent=MS.gene068447.t1 |
Gene Sequence |
Protein sequence |