Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068856.t1 | XP_024635516.1 | 99.3 | 539 | 4 | 0 | 1 | 539 | 1 | 539 | 3.20E-291 | 1010.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068856.t1 | Q84K11 | 75.9 | 553 | 119 | 3 | 1 | 539 | 4 | 556 | 3.6e-219 | 762.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068856.t1 | A0A072UVB9 | 97.4 | 549 | 4 | 1 | 1 | 539 | 1 | 549 | 6.3e-289 | 1002.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064737 | MS.gene068856 | PPI |
MS.gene49154 | MS.gene068856 | PPI |
MS.gene068856 | MS.gene30654 | PPI |
MS.gene69422 | MS.gene068856 | PPI |
MS.gene62607 | MS.gene068856 | PPI |
MS.gene068856 | MS.gene60613 | PPI |
MS.gene040499 | MS.gene068856 | PPI |
MS.gene068856 | MS.gene061126 | PPI |
MS.gene068856 | MS.gene006231 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068856.t1 | MTR_3g452710 | 97.450 | 549 | 4 | 1 | 1 | 539 | 1 | 549 | 0.0 | 1103 |
MS.gene068856.t1 | MTR_3g452710 | 85.343 | 539 | 22 | 4 | 1 | 539 | 1 | 482 | 0.0 | 917 |
MS.gene068856.t1 | MTR_2g100130 | 83.636 | 330 | 53 | 1 | 211 | 539 | 181 | 510 | 0.0 | 587 |
MS.gene068856.t1 | MTR_2g100130 | 83.636 | 330 | 53 | 1 | 211 | 539 | 171 | 500 | 0.0 | 587 |
MS.gene068856.t1 | MTR_2g100130 | 83.636 | 330 | 53 | 1 | 211 | 539 | 72 | 401 | 0.0 | 586 |
MS.gene068856.t1 | MTR_2g100130 | 83.636 | 330 | 53 | 1 | 211 | 539 | 142 | 471 | 0.0 | 585 |
MS.gene068856.t1 | MTR_2g100160 | 84.802 | 329 | 49 | 1 | 211 | 538 | 91 | 419 | 0.0 | 583 |
MS.gene068856.t1 | MTR_2g100130 | 83.280 | 311 | 51 | 1 | 211 | 520 | 181 | 491 | 0.0 | 550 |
MS.gene068856.t1 | MTR_2g100130 | 83.280 | 311 | 50 | 2 | 211 | 520 | 181 | 490 | 0.0 | 546 |
MS.gene068856.t1 | MTR_2g100130 | 83.280 | 311 | 50 | 2 | 211 | 520 | 142 | 451 | 0.0 | 545 |
MS.gene068856.t1 | MTR_2g100130 | 82.927 | 287 | 48 | 1 | 211 | 496 | 181 | 467 | 5.54e-177 | 508 |
MS.gene068856.t1 | MTR_1g074880 | 44.664 | 253 | 133 | 4 | 252 | 503 | 33 | 279 | 3.43e-71 | 231 |
MS.gene068856.t1 | MTR_1g074880 | 44.664 | 253 | 133 | 4 | 252 | 503 | 33 | 279 | 4.57e-71 | 230 |
MS.gene068856.t1 | MTR_7g112870 | 41.429 | 280 | 156 | 5 | 226 | 503 | 8 | 281 | 1.68e-70 | 229 |
MS.gene068856.t1 | MTR_7g116380 | 43.561 | 264 | 142 | 4 | 241 | 503 | 22 | 279 | 1.16e-69 | 226 |
MS.gene068856.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 1.41e-69 | 226 |
MS.gene068856.t1 | MTR_7g116380 | 43.561 | 264 | 142 | 4 | 241 | 503 | 22 | 279 | 1.44e-69 | 226 |
MS.gene068856.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 1.70e-69 | 227 |
MS.gene068856.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 51 | 308 | 2.00e-69 | 227 |
MS.gene068856.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 2.14e-69 | 226 |
MS.gene068856.t1 | MTR_5g081230 | 43.874 | 253 | 135 | 4 | 252 | 503 | 50 | 296 | 1.01e-68 | 224 |
MS.gene068856.t1 | MTR_8g005010 | 42.857 | 252 | 137 | 4 | 253 | 503 | 32 | 277 | 1.29e-68 | 223 |
MS.gene068856.t1 | MTR_8g098980 | 42.049 | 283 | 153 | 5 | 226 | 503 | 4 | 280 | 5.05e-68 | 222 |
MS.gene068856.t1 | MTR_1g074880 | 47.534 | 223 | 114 | 3 | 282 | 503 | 4 | 224 | 4.58e-67 | 218 |
MS.gene068856.t1 | MTR_1g074880 | 47.534 | 223 | 114 | 3 | 282 | 503 | 4 | 224 | 4.85e-67 | 218 |
MS.gene068856.t1 | MTR_1g043240 | 41.897 | 253 | 140 | 4 | 252 | 503 | 33 | 279 | 2.60e-66 | 218 |
MS.gene068856.t1 | MTR_1g079950 | 46.396 | 222 | 116 | 3 | 283 | 503 | 34 | 253 | 8.86e-65 | 214 |
MS.gene068856.t1 | MTR_8g062430 | 42.857 | 245 | 134 | 5 | 279 | 521 | 50 | 290 | 8.51e-59 | 197 |
MS.gene068856.t1 | MTR_8g085610 | 39.636 | 275 | 153 | 7 | 256 | 525 | 9 | 275 | 8.82e-59 | 197 |
MS.gene068856.t1 | MTR_5g093990 | 38.225 | 293 | 172 | 6 | 232 | 522 | 4 | 289 | 9.28e-59 | 197 |
MS.gene068856.t1 | MTR_8g085610 | 39.636 | 275 | 153 | 7 | 256 | 525 | 33 | 299 | 1.73e-58 | 197 |
MS.gene068856.t1 | MTR_7g107310 | 36.789 | 299 | 176 | 7 | 232 | 525 | 14 | 304 | 1.93e-58 | 197 |
MS.gene068856.t1 | MTR_5g037200 | 42.449 | 245 | 135 | 5 | 279 | 521 | 50 | 290 | 2.04e-58 | 196 |
MS.gene068856.t1 | MTR_1g039380 | 43.307 | 254 | 136 | 5 | 254 | 505 | 1 | 248 | 8.22e-58 | 194 |
MS.gene068856.t1 | MTR_1g039380 | 45.852 | 229 | 120 | 4 | 279 | 505 | 46 | 272 | 6.94e-57 | 192 |
MS.gene068856.t1 | MTR_8g072600 | 35.598 | 368 | 175 | 12 | 222 | 527 | 70 | 437 | 3.55e-53 | 187 |
MS.gene068856.t1 | MTR_2g087530 | 36.604 | 265 | 143 | 8 | 256 | 503 | 562 | 818 | 3.25e-41 | 159 |
MS.gene068856.t1 | MTR_2g087530 | 36.604 | 265 | 143 | 8 | 256 | 503 | 675 | 931 | 6.03e-41 | 158 |
MS.gene068856.t1 | MTR_1g089370 | 35.821 | 268 | 147 | 8 | 252 | 502 | 555 | 814 | 1.97e-40 | 157 |
MS.gene068856.t1 | MTR_4g050540 | 36.226 | 265 | 144 | 8 | 256 | 503 | 680 | 936 | 1.03e-39 | 155 |
MS.gene068856.t1 | MTR_2g099710 | 33.058 | 363 | 156 | 17 | 225 | 527 | 177 | 512 | 5.56e-38 | 148 |
MS.gene068856.t1 | MTR_8g072600 | 34.909 | 275 | 140 | 7 | 222 | 457 | 70 | 344 | 4.06e-37 | 140 |
MS.gene068856.t1 | MTR_5g037200 | 43.165 | 139 | 74 | 4 | 279 | 415 | 50 | 185 | 3.86e-28 | 112 |
MS.gene068856.t1 | MTR_8g107280 | 42.105 | 114 | 66 | 0 | 11 | 124 | 479 | 592 | 4.55e-18 | 87.8 |
MS.gene068856.t1 | MTR_5g009930 | 31.579 | 171 | 114 | 2 | 11 | 178 | 2 | 172 | 2.19e-17 | 83.6 |
MS.gene068856.t1 | MTR_5g009930 | 31.579 | 171 | 114 | 2 | 11 | 178 | 2 | 172 | 3.10e-17 | 84.0 |
MS.gene068856.t1 | MTR_1g030300 | 34.711 | 121 | 78 | 1 | 11 | 130 | 181 | 301 | 3.25e-17 | 84.7 |
MS.gene068856.t1 | MTR_4g094205 | 43.636 | 110 | 62 | 0 | 7 | 116 | 484 | 593 | 1.45e-16 | 83.2 |
MS.gene068856.t1 | MTR_1g084100 | 39.286 | 112 | 67 | 1 | 7 | 118 | 87 | 197 | 1.16e-15 | 79.7 |
MS.gene068856.t1 | MTR_5g012030 | 39.216 | 102 | 62 | 0 | 11 | 112 | 2 | 103 | 1.46e-15 | 80.1 |
MS.gene068856.t1 | MTR_5g012030 | 33.621 | 116 | 77 | 0 | 11 | 126 | 392 | 507 | 8.49e-14 | 74.3 |
MS.gene068856.t1 | MTR_2g078020 | 30.469 | 128 | 89 | 0 | 6 | 133 | 457 | 584 | 2.72e-15 | 79.3 |
MS.gene068856.t1 | MTR_2g078020 | 34.188 | 117 | 75 | 2 | 12 | 128 | 222 | 336 | 2.39e-11 | 67.0 |
MS.gene068856.t1 | MTR_2g078020 | 30.469 | 128 | 89 | 0 | 6 | 133 | 457 | 584 | 3.61e-15 | 79.0 |
MS.gene068856.t1 | MTR_2g078020 | 34.188 | 117 | 75 | 2 | 12 | 128 | 222 | 336 | 3.43e-11 | 66.2 |
MS.gene068856.t1 | MTR_6g053290 | 31.818 | 132 | 86 | 1 | 11 | 142 | 2 | 129 | 4.52e-13 | 71.2 |
MS.gene068856.t1 | MTR_6g053290 | 31.818 | 132 | 86 | 1 | 11 | 142 | 2 | 129 | 5.61e-13 | 70.9 |
MS.gene068856.t1 | MTR_1g041435 | 33.628 | 113 | 75 | 0 | 14 | 126 | 14 | 126 | 9.15e-13 | 69.7 |
MS.gene068856.t1 | MTR_3g087480 | 33.945 | 109 | 70 | 1 | 12 | 120 | 223 | 329 | 1.32e-12 | 70.9 |
MS.gene068856.t1 | MTR_4g102390 | 41.573 | 89 | 52 | 0 | 15 | 103 | 119 | 207 | 1.82e-12 | 69.7 |
MS.gene068856.t1 | MTR_7g059150 | 30.894 | 123 | 78 | 1 | 8 | 123 | 92 | 214 | 2.02e-11 | 65.1 |
MS.gene068856.t1 | MTR_7g115280 | 33.613 | 119 | 79 | 0 | 10 | 128 | 334 | 452 | 3.84e-11 | 65.9 |
MS.gene068856.t1 | MTR_2g090135 | 29.927 | 137 | 87 | 2 | 8 | 135 | 95 | 231 | 6.16e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068856.t1 | AT2G42810 | 80.334 | 539 | 99 | 4 | 3 | 539 | 5 | 538 | 0.0 | 882 |
MS.gene068856.t1 | AT2G42810 | 80.112 | 538 | 101 | 3 | 3 | 539 | 5 | 537 | 0.0 | 881 |
MS.gene068856.t1 | AT2G42810 | 75.047 | 537 | 77 | 4 | 3 | 539 | 5 | 484 | 0.0 | 824 |
MS.gene068856.t1 | AT2G42810 | 75.047 | 537 | 77 | 4 | 3 | 539 | 5 | 484 | 0.0 | 824 |
MS.gene068856.t1 | AT2G42810 | 75.047 | 537 | 77 | 4 | 3 | 539 | 5 | 484 | 0.0 | 824 |
MS.gene068856.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 7.67e-71 | 229 |
MS.gene068856.t1 | AT2G29400 | 43.922 | 255 | 137 | 3 | 252 | 506 | 50 | 298 | 1.07e-70 | 229 |
MS.gene068856.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 1.18e-70 | 229 |
MS.gene068856.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 1.18e-70 | 229 |
MS.gene068856.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 1.22e-70 | 229 |
MS.gene068856.t1 | AT5G59160 | 39.032 | 310 | 172 | 6 | 225 | 527 | 10 | 309 | 1.48e-70 | 229 |
MS.gene068856.t1 | AT5G59160 | 39.032 | 310 | 172 | 6 | 225 | 527 | 10 | 309 | 1.48e-70 | 229 |
MS.gene068856.t1 | AT5G59160 | 39.032 | 310 | 172 | 6 | 225 | 527 | 10 | 309 | 1.48e-70 | 229 |
MS.gene068856.t1 | AT3G46820 | 40.909 | 286 | 156 | 5 | 225 | 503 | 10 | 289 | 2.63e-70 | 228 |
MS.gene068856.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.16e-68 | 224 |
MS.gene068856.t1 | AT2G39840 | 44.664 | 253 | 133 | 4 | 252 | 503 | 47 | 293 | 1.21e-68 | 224 |
MS.gene068856.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.41e-68 | 224 |
MS.gene068856.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.70e-68 | 224 |
MS.gene068856.t1 | AT3G05580 | 41.667 | 276 | 153 | 5 | 230 | 503 | 16 | 285 | 1.80e-68 | 223 |
MS.gene068856.t1 | AT4G11240 | 43.478 | 253 | 136 | 4 | 252 | 503 | 34 | 280 | 1.45e-67 | 221 |
MS.gene068856.t1 | AT1G64040 | 39.789 | 284 | 160 | 5 | 225 | 503 | 3 | 280 | 1.97e-65 | 216 |
MS.gene068856.t1 | AT2G42500 | 38.127 | 299 | 172 | 7 | 226 | 523 | 11 | 297 | 6.46e-61 | 203 |
MS.gene068856.t1 | AT5G55260 | 37.667 | 300 | 178 | 6 | 232 | 529 | 4 | 296 | 1.65e-60 | 202 |
MS.gene068856.t1 | AT4G26720 | 41.897 | 253 | 142 | 5 | 279 | 529 | 47 | 296 | 5.38e-60 | 201 |
MS.gene068856.t1 | AT1G10430 | 42.857 | 245 | 134 | 5 | 279 | 521 | 50 | 290 | 7.69e-59 | 198 |
MS.gene068856.t1 | AT1G10430 | 42.857 | 245 | 134 | 5 | 279 | 521 | 50 | 290 | 7.69e-59 | 198 |
MS.gene068856.t1 | AT3G58500 | 37.374 | 297 | 175 | 7 | 228 | 523 | 11 | 297 | 8.91e-59 | 198 |
MS.gene068856.t1 | AT1G59830 | 44.934 | 227 | 120 | 4 | 279 | 503 | 50 | 273 | 1.36e-58 | 197 |
MS.gene068856.t1 | AT3G05580 | 41.564 | 243 | 134 | 5 | 230 | 470 | 16 | 252 | 3.41e-58 | 194 |
MS.gene068856.t1 | AT1G69960 | 42.449 | 245 | 135 | 5 | 279 | 521 | 51 | 291 | 9.46e-58 | 195 |
MS.gene068856.t1 | AT1G50370 | 45.852 | 229 | 120 | 4 | 279 | 505 | 46 | 272 | 5.77e-57 | 192 |
MS.gene068856.t1 | AT3G19980 | 44.978 | 229 | 122 | 4 | 279 | 505 | 46 | 272 | 2.00e-55 | 189 |
MS.gene068856.t1 | AT5G63870 | 38.033 | 305 | 132 | 11 | 280 | 527 | 81 | 385 | 9.66e-54 | 187 |
MS.gene068856.t1 | AT5G63870 | 38.033 | 305 | 132 | 11 | 280 | 527 | 81 | 385 | 9.66e-54 | 187 |
MS.gene068856.t1 | AT5G55260 | 33.431 | 341 | 177 | 8 | 232 | 529 | 4 | 337 | 2.24e-53 | 184 |
MS.gene068856.t1 | AT2G42500 | 39.256 | 242 | 142 | 4 | 283 | 523 | 13 | 250 | 9.26e-51 | 175 |
MS.gene068856.t1 | AT1G59830 | 45.226 | 199 | 104 | 4 | 279 | 475 | 50 | 245 | 9.77e-50 | 172 |
MS.gene068856.t1 | AT1G03445 | 37.273 | 330 | 170 | 12 | 225 | 529 | 446 | 763 | 3.36e-48 | 179 |
MS.gene068856.t1 | AT1G03445 | 37.273 | 330 | 170 | 12 | 225 | 529 | 446 | 763 | 3.46e-48 | 179 |
MS.gene068856.t1 | AT4G03080 | 39.419 | 241 | 125 | 7 | 280 | 503 | 581 | 817 | 3.01e-41 | 159 |
MS.gene068856.t1 | AT1G48120 | 33.333 | 321 | 149 | 8 | 252 | 509 | 630 | 948 | 2.06e-38 | 151 |
MS.gene068856.t1 | AT2G27210 | 35.741 | 263 | 144 | 8 | 258 | 503 | 683 | 937 | 4.63e-38 | 150 |
MS.gene068856.t1 | AT2G27210 | 35.741 | 263 | 144 | 8 | 258 | 503 | 688 | 942 | 4.65e-38 | 150 |
MS.gene068856.t1 | AT5G63870 | 37.963 | 216 | 100 | 6 | 280 | 461 | 81 | 296 | 1.54e-37 | 140 |
MS.gene068856.t1 | AT1G08420 | 36.719 | 256 | 137 | 8 | 265 | 503 | 706 | 953 | 1.64e-37 | 148 |
MS.gene068856.t1 | AT1G08420 | 36.719 | 256 | 137 | 8 | 265 | 503 | 701 | 948 | 1.94e-37 | 148 |
MS.gene068856.t1 | AT5G10900 | 30.606 | 330 | 181 | 8 | 227 | 509 | 163 | 491 | 7.13e-35 | 139 |
MS.gene068856.t1 | AT5G10900 | 30.606 | 330 | 181 | 8 | 227 | 509 | 163 | 491 | 7.75e-35 | 139 |
MS.gene068856.t1 | AT5G10900 | 30.606 | 330 | 181 | 8 | 227 | 509 | 163 | 491 | 8.83e-35 | 139 |
MS.gene068856.t1 | AT2G42500 | 42.056 | 107 | 59 | 2 | 279 | 382 | 57 | 163 | 7.11e-21 | 90.5 |
MS.gene068856.t1 | AT2G42500 | 40.541 | 111 | 63 | 2 | 279 | 386 | 57 | 167 | 9.41e-21 | 90.5 |
MS.gene068856.t1 | AT2G42500 | 42.056 | 107 | 59 | 2 | 279 | 382 | 57 | 163 | 1.16e-20 | 90.1 |
MS.gene068856.t1 | AT4G11260 | 35.398 | 113 | 73 | 0 | 11 | 123 | 2 | 114 | 1.97e-16 | 81.3 |
MS.gene068856.t1 | AT3G17970 | 44.340 | 106 | 59 | 0 | 11 | 116 | 474 | 579 | 5.53e-16 | 81.6 |
MS.gene068856.t1 | AT5G09420 | 38.333 | 120 | 74 | 0 | 7 | 126 | 484 | 603 | 6.71e-16 | 81.3 |
MS.gene068856.t1 | AT1G62740 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 2.24e-15 | 79.3 |
MS.gene068856.t1 | AT1G62740 | 30.508 | 118 | 82 | 0 | 11 | 128 | 382 | 499 | 1.75e-11 | 67.0 |
MS.gene068856.t1 | AT4G08320 | 35.043 | 117 | 75 | 1 | 11 | 126 | 175 | 291 | 8.05e-15 | 77.0 |
MS.gene068856.t1 | AT1G12270 | 37.288 | 118 | 74 | 0 | 11 | 128 | 2 | 119 | 8.55e-15 | 77.8 |
MS.gene068856.t1 | AT1G12270 | 31.624 | 117 | 80 | 0 | 12 | 128 | 384 | 500 | 1.82e-11 | 67.0 |
MS.gene068856.t1 | AT4G08320 | 35.043 | 117 | 75 | 1 | 11 | 126 | 175 | 291 | 1.11e-14 | 76.6 |
MS.gene068856.t1 | AT1G56440 | 37.500 | 120 | 74 | 1 | 15 | 134 | 88 | 206 | 1.37e-14 | 76.6 |
MS.gene068856.t1 | AT1G56440 | 37.500 | 120 | 74 | 1 | 15 | 134 | 78 | 196 | 1.46e-14 | 76.6 |
MS.gene068856.t1 | AT4G12400 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 3.28e-14 | 75.9 |
MS.gene068856.t1 | AT4G12400 | 30.508 | 118 | 82 | 0 | 11 | 128 | 369 | 486 | 3.20e-11 | 66.2 |
MS.gene068856.t1 | AT4G12400 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 3.34e-14 | 75.9 |
MS.gene068856.t1 | AT4G12400 | 30.508 | 118 | 82 | 0 | 11 | 128 | 369 | 486 | 3.49e-11 | 66.2 |
MS.gene068856.t1 | AT1G04190 | 35.833 | 120 | 76 | 1 | 2 | 120 | 5 | 124 | 3.53e-14 | 74.3 |
MS.gene068856.t1 | AT4G22670 | 42.574 | 101 | 57 | 1 | 3 | 103 | 116 | 215 | 1.27e-13 | 73.6 |
MS.gene068856.t1 | AT4G23570 | 30.282 | 142 | 93 | 2 | 33 | 168 | 24 | 165 | 1.21e-12 | 69.7 |
MS.gene068856.t1 | AT4G23570 | 30.282 | 142 | 93 | 2 | 33 | 168 | 24 | 165 | 1.21e-12 | 69.7 |
MS.gene068856.t1 | AT3G58620 | 26.446 | 121 | 89 | 0 | 6 | 126 | 444 | 564 | 2.41e-12 | 70.1 |
MS.gene068856.t1 | AT3G14950 | 35.000 | 120 | 76 | 1 | 12 | 131 | 259 | 376 | 2.81e-12 | 70.1 |
MS.gene068856.t1 | AT3G58620 | 26.446 | 121 | 89 | 0 | 6 | 126 | 444 | 564 | 4.13e-12 | 69.3 |
MS.gene068856.t1 | AT1G53300 | 32.500 | 120 | 79 | 1 | 9 | 128 | 225 | 342 | 8.47e-12 | 68.6 |
MS.gene068856.t1 | AT2G42580 | 30.328 | 122 | 83 | 2 | 7 | 128 | 216 | 335 | 2.02e-11 | 67.0 |
MS.gene068856.t1 | AT5G65160 | 29.508 | 122 | 86 | 0 | 13 | 134 | 472 | 593 | 2.29e-11 | 67.0 |
MS.gene068856.t1 | AT4G23570 | 30.070 | 143 | 93 | 3 | 33 | 168 | 24 | 166 | 2.46e-11 | 65.9 |
MS.gene068856.t1 | AT5G10090 | 29.204 | 113 | 80 | 0 | 18 | 130 | 478 | 590 | 2.63e-11 | 66.6 |
Find 118 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGAACCTTTGAATATTT+AGG | 0.215738 | 3.2:-41524697 | None:intergenic |
GTTACCTGATCACAGTAATT+TGG | 0.220828 | 3.2:-41531558 | None:intergenic |
TTCAATTTCTTTGTTGCATC+AGG | 0.258423 | 3.2:-41527075 | None:intergenic |
CGCTTGCTAGGTCCTCTTCC+AGG | 0.271139 | 3.2:-41531318 | None:intergenic |
GTTGGTCTGCTGTTGGTACT+TGG | 0.281699 | 3.2:+41528671 | MS.gene068856:CDS |
CGGTGCTGCTCATCTTGGGC+TGG | 0.287475 | 3.2:+41524824 | MS.gene068856:CDS |
TTCTTGAAGGATAATAATTT+AGG | 0.289596 | 3.2:+41531381 | MS.gene068856:CDS |
GAAAATCCATATCTATTTAA+TGG | 0.291516 | 3.2:+41530573 | MS.gene068856:CDS |
AGGCGCGGTGCTGCTCATCT+TGG | 0.303491 | 3.2:+41524819 | MS.gene068856:CDS |
AGAAGGGGATACTATTACTT+TGG | 0.310255 | 3.2:+41529601 | MS.gene068856:CDS |
TTTGTTGCATCAGGATCATT+TGG | 0.332421 | 3.2:-41527066 | None:intergenic |
GTAATGTTGGGTTTCAAATC+AGG | 0.337705 | 3.2:-41531757 | None:intergenic |
TATTCAGGAGCAAGAATAGA+AGG | 0.343533 | 3.2:+41529584 | MS.gene068856:CDS |
ACCTATTGAACGGAAATCTA+TGG | 0.344050 | 3.2:-41527181 | None:intergenic |
CTGAAATCCGATCAATTAAT+CGG | 0.356487 | 3.2:+41531133 | MS.gene068856:CDS |
CATCTTAGGCTCGAGGAATA+TGG | 0.358933 | 3.2:+41524634 | MS.gene068856:CDS |
AACAGAAGTGCTTGCATAAA+CGG | 0.363037 | 3.2:+41529657 | MS.gene068856:CDS |
GATGTCGAGCCACAGTATTC+AGG | 0.365324 | 3.2:+41529569 | MS.gene068856:intron |
AAATCTATGGATTCAGCTAT+TGG | 0.370862 | 3.2:-41527168 | None:intergenic |
ACACAAGCAATTGAGCTAAA+TGG | 0.386922 | 3.2:+41524574 | MS.gene068856:CDS |
TCTATTTAATGGTGACTTTG+TGG | 0.389007 | 3.2:+41530584 | MS.gene068856:CDS |
CCTCTTCCAGGGAGAGGTTG+TGG | 0.389634 | 3.2:-41531306 | None:intergenic |
GGCGCGGTGCTGCTCATCTT+GGG | 0.390972 | 3.2:+41524820 | MS.gene068856:CDS |
AGTATTCTGCTGTTTACCTT+TGG | 0.392555 | 3.2:+41531041 | MS.gene068856:CDS |
TCCATAGATTTCCGTTCAAT+AGG | 0.396664 | 3.2:+41527180 | MS.gene068856:CDS |
TTGGTCTGCTGTTGGTACTT+GGG | 0.404386 | 3.2:+41528672 | MS.gene068856:CDS |
CGTGGTGTAGGCCTTTCTTT+CGG | 0.405811 | 3.2:+41531339 | MS.gene068856:CDS |
AACATTTGTTGAACTATTTG+CGG | 0.408597 | 3.2:+41531017 | MS.gene068856:CDS |
AAGTCACCATTAAATAGATA+TGG | 0.408912 | 3.2:-41530579 | None:intergenic |
TGCTCCAAATTACTGTGATC+AGG | 0.411289 | 3.2:+41531554 | MS.gene068856:CDS |
AAGAGCATGAACAAGATATA+TGG | 0.417540 | 3.2:+41530961 | MS.gene068856:CDS |
TGCTGTTGGTACTTGGGGCA+TGG | 0.418239 | 3.2:+41528678 | MS.gene068856:CDS |
AATGGTGACTTTGTGGATAG+AGG | 0.418839 | 3.2:+41530591 | MS.gene068856:CDS |
AGCAGTGACAGTAGCAGTTA+TGG | 0.421990 | 3.2:+41528592 | MS.gene068856:CDS |
AGGAAAGCGCCGCAATTCTT+CGG | 0.427163 | 3.2:+41528547 | MS.gene068856:intron |
TGGTGGAGTAGCTGCAATAC+TGG | 0.427651 | 3.2:+41528698 | MS.gene068856:CDS |
TAAGCCATTGGCTTAACATC+AGG | 0.430731 | 3.2:-41532202 | None:intergenic |
AGGCACTTCAAATCGAATAA+AGG | 0.436554 | 3.2:-41531737 | None:intergenic |
TGAGCTCAACGGGCTGCCTT+CGG | 0.437951 | 3.2:+41530548 | MS.gene068856:CDS |
GGTGCTGCTCATCTTGGGCT+GGG | 0.441669 | 3.2:+41524825 | MS.gene068856:CDS |
TCGGTGGGGATGTTACAAAA+AGG | 0.445680 | 3.2:+41531358 | MS.gene068856:CDS |
GTGTAGGCCTTTCTTTCGGT+GGG | 0.447700 | 3.2:+41531343 | MS.gene068856:CDS |
AGTAAAGGACGAGGGTTATG+AGG | 0.450555 | 3.2:+41531497 | MS.gene068856:CDS |
TCTTGGGCTGGGAAAATTCA+AGG | 0.456210 | 3.2:+41524836 | MS.gene068856:CDS |
ATATTGATTATGAGAACATT+CGG | 0.457850 | 3.2:-41532240 | None:intergenic |
CGGTGCATCTATACCTTCCT+CGG | 0.467541 | 3.2:-41531169 | None:intergenic |
GGTTGATGTGTGAGTTGCTA+TGG | 0.470365 | 3.2:+41531277 | MS.gene068856:CDS |
CACAAAACCGATTAATTGAT+CGG | 0.472508 | 3.2:-41531140 | None:intergenic |
GGATTTCGTAAAGAAAATGA+TGG | 0.477932 | 3.2:+41529622 | MS.gene068856:CDS |
CATTACTACATTTGCAGCAG+TGG | 0.484793 | 3.2:+41531774 | MS.gene068856:CDS |
CAGTGGTGGTCATGTTGGTC+AGG | 0.491022 | 3.2:+41528615 | MS.gene068856:CDS |
ATTGGACGCTTCACCGATCC+TGG | 0.495364 | 3.2:-41527150 | None:intergenic |
TGGTCTGCTGTTGGTACTTG+GGG | 0.497333 | 3.2:+41528673 | MS.gene068856:CDS |
TAACATCCCCACCGAAAGAA+AGG | 0.498215 | 3.2:-41531350 | None:intergenic |
CTAGGTCCTCTTCCAGGGAG+AGG | 0.499390 | 3.2:-41531312 | None:intergenic |
GGTGTAGGCCTTTCTTTCGG+TGG | 0.499934 | 3.2:+41531342 | MS.gene068856:CDS |
AGGCCTACACCACGCTTGCT+AGG | 0.500648 | 3.2:-41531330 | None:intergenic |
TGATGCAACAAAGAAATTGA+AGG | 0.507056 | 3.2:+41527077 | MS.gene068856:CDS |
TGATGTTATAGGGTTACTAC+AGG | 0.508639 | 3.2:+41524799 | MS.gene068856:intron |
CACAATTGTAGCTACTATTG+TGG | 0.513387 | 3.2:-41528648 | None:intergenic |
TGCTGCAAATGTAGTAATGT+TGG | 0.520819 | 3.2:-41531770 | None:intergenic |
TTGTGGTGATGTGCATGGTC+AGG | 0.523684 | 3.2:+41529868 | MS.gene068856:CDS |
CACTGCTGCTATGGCAACTT+CGG | 0.523744 | 3.2:-41528576 | None:intergenic |
TTTAAGTGCATGTCTCCATC+AGG | 0.524892 | 3.2:+41530651 | MS.gene068856:CDS |
CCACAACCTCTCCCTGGAAG+AGG | 0.528098 | 3.2:+41531306 | MS.gene068856:CDS |
AATTGTGGTTGGTCTGCTGT+TGG | 0.529566 | 3.2:+41528664 | MS.gene068856:CDS |
GTGTATATAGATCAATTGCA+TGG | 0.529659 | 3.2:-41524555 | None:intergenic |
TGCTACTGTCACTGCTGCTA+TGG | 0.532576 | 3.2:-41528585 | None:intergenic |
AGTGATCCACAACCTCTCCC+TGG | 0.533336 | 3.2:+41531300 | MS.gene068856:CDS |
GAAGAAGCTATTTCTGTACC+AGG | 0.536670 | 3.2:+41527132 | MS.gene068856:CDS |
GGACCTAGCAAGCGTGGTGT+AGG | 0.541640 | 3.2:+41531327 | MS.gene068856:CDS |
AAGTTGTTTGCATAAGCCAT+TGG | 0.542638 | 3.2:-41532214 | None:intergenic |
GGTGCATCTATACCTTCCTC+GGG | 0.543952 | 3.2:-41531168 | None:intergenic |
AGCTATTTCTGTACCAGGAT+CGG | 0.552634 | 3.2:+41527137 | MS.gene068856:CDS |
GCTGCTATGGCAACTTCGGT+TGG | 0.553389 | 3.2:-41528572 | None:intergenic |
ATCGTGCCTTTGCACATCTT+AGG | 0.554055 | 3.2:+41524620 | MS.gene068856:CDS |
GCTGCAAATGTAGTAATGTT+GGG | 0.558396 | 3.2:-41531769 | None:intergenic |
TATGGCAGTGGTGGTCATGT+TGG | 0.558913 | 3.2:+41528610 | MS.gene068856:CDS |
CTTTGAATGCTTCATTAGCA+AGG | 0.559030 | 3.2:-41524213 | None:intergenic |
ACTGTTTGTGGTGATGTGCA+TGG | 0.560392 | 3.2:+41529863 | MS.gene068856:CDS |
ATTCAGGAGCAAGAATAGAA+GGG | 0.564418 | 3.2:+41529585 | MS.gene068856:CDS |
TCAAAATAGTACCTATTGAA+CGG | 0.564875 | 3.2:-41527191 | None:intergenic |
ACAGTTATGTCGACAAGAGA+AGG | 0.566155 | 3.2:-41529821 | None:intergenic |
GCTTGCTAGGTCCTCTTCCA+GGG | 0.567459 | 3.2:-41531317 | None:intergenic |
TGTGCGATCTCATGAAGTAA+AGG | 0.569085 | 3.2:+41531482 | MS.gene068856:CDS |
TCAGCTATATATCTAGCTAG+AGG | 0.570449 | 3.2:+41530925 | MS.gene068856:intron |
ATCTCATGAAGTAAAGGACG+AGG | 0.570634 | 3.2:+41531488 | MS.gene068856:CDS |
ATAGTAGCTACAATTGTGGT+TGG | 0.570813 | 3.2:+41528653 | MS.gene068856:CDS |
CTTGCTAATGAAGCATTCAA+AGG | 0.570823 | 3.2:+41524214 | MS.gene068856:CDS |
AGTTGATCCTAAATATTCAA+AGG | 0.571712 | 3.2:+41524690 | MS.gene068856:CDS |
TCGTTTATCACATGAGCCAA+AGG | 0.573998 | 3.2:-41531057 | None:intergenic |
GACAGTAGCAGTTATGGCAG+TGG | 0.575800 | 3.2:+41528598 | MS.gene068856:CDS |
CGGTTGGCACCGAAGAATTG+CGG | 0.579866 | 3.2:-41528556 | None:intergenic |
GTCGACATAACTGTTCCTCA+TGG | 0.591645 | 3.2:+41529830 | MS.gene068856:CDS |
CACAATAGTAGCTACAATTG+TGG | 0.593440 | 3.2:+41528649 | MS.gene068856:CDS |
CAGCTATATATCTAGCTAGA+GGG | 0.594475 | 3.2:+41530926 | MS.gene068856:intron |
TGTATATAGATCAATTGCAT+GGG | 0.597547 | 3.2:-41524554 | None:intergenic |
TGTAGGCCTTTCTTTCGGTG+GGG | 0.598927 | 3.2:+41531344 | MS.gene068856:CDS |
CTCGAGCCTAAGATGTGCAA+AGG | 0.604486 | 3.2:-41524626 | None:intergenic |
TTCAGGAGCAAGAATAGAAG+GGG | 0.604663 | 3.2:+41529586 | MS.gene068856:CDS |
ACACCCTGATGTTAAGCCAA+TGG | 0.605052 | 3.2:+41532198 | MS.gene068856:CDS |
ATTCTTGCTCCTGAATACTG+TGG | 0.606734 | 3.2:-41529578 | None:intergenic |
AAGCCATTGGCTTAACATCA+GGG | 0.608784 | 3.2:-41532201 | None:intergenic |
AGTAGCAGTTATGGCAGTGG+TGG | 0.612655 | 3.2:+41528601 | MS.gene068856:CDS |
CTTTGCACATCTTAGGCTCG+AGG | 0.615129 | 3.2:+41524627 | MS.gene068856:CDS |
GGAAGAGGACCTAGCAAGCG+TGG | 0.624373 | 3.2:+41531321 | MS.gene068856:CDS |
ACTTAAATGCAAACAAAGTG+AGG | 0.624984 | 3.2:-41530635 | None:intergenic |
TGCAATACTAGATGCTACAA+AGG | 0.625792 | 3.2:+41524660 | MS.gene068856:CDS |
ATTGGCTTAACATCAGGGTG+TGG | 0.628926 | 3.2:-41532196 | None:intergenic |
TGAAGAGAATAATGTCGCAA+AGG | 0.629106 | 3.2:+41524174 | MS.gene068856:CDS |
GCATCTATACCTTCCTCGGG+AGG | 0.634980 | 3.2:-41531165 | None:intergenic |
GTGCAAAGGCACGATTAGCA+AGG | 0.640637 | 3.2:-41524612 | None:intergenic |
TTTCTGTAGATGGGTAACAA+AGG | 0.644956 | 3.2:+41531712 | MS.gene068856:intron |
TGTTGGTACTTGGGGCATGG+TGG | 0.652869 | 3.2:+41528681 | MS.gene068856:CDS |
GGTTATGAGGTTGATCATGA+CGG | 0.656315 | 3.2:+41531510 | MS.gene068856:CDS |
TTATAGGGTTACTACAGGCG+CGG | 0.696889 | 3.2:+41524804 | MS.gene068856:intron |
TTGATTATGAGAACATTCGG+AGG | 0.701317 | 3.2:-41532237 | None:intergenic |
TCTCATGAAGTAAAGGACGA+GGG | 0.727443 | 3.2:+41531489 | MS.gene068856:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 41524166 | 41532255 | 41524166 | ID=MS.gene068856 |
chr3.2 | mRNA | 41524166 | 41532255 | 41524166 | ID=MS.gene068856.t1;Parent=MS.gene068856 |
chr3.2 | exon | 41524166 | 41524235 | 41524166 | ID=MS.gene068856.t1.exon1;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41524166 | 41524235 | 41524166 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41524542 | 41524711 | 41524542 | ID=MS.gene068856.t1.exon2;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41524542 | 41524711 | 41524542 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41524810 | 41524881 | 41524810 | ID=MS.gene068856.t1.exon3;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41524810 | 41524881 | 41524810 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41527051 | 41527201 | 41527051 | ID=MS.gene068856.t1.exon4;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41527051 | 41527201 | 41527051 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41528549 | 41528719 | 41528549 | ID=MS.gene068856.t1.exon5;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41528549 | 41528719 | 41528549 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41529570 | 41529678 | 41529570 | ID=MS.gene068856.t1.exon6;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41529570 | 41529678 | 41529570 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41529772 | 41529889 | 41529772 | ID=MS.gene068856.t1.exon7;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41529772 | 41529889 | 41529772 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41530525 | 41530672 | 41530525 | ID=MS.gene068856.t1.exon8;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41530525 | 41530672 | 41530525 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41530929 | 41531177 | 41530929 | ID=MS.gene068856.t1.exon9;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41530929 | 41531177 | 41530929 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41531277 | 41531402 | 41531277 | ID=MS.gene068856.t1.exon10;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41531277 | 41531402 | 41531277 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41531475 | 41531575 | 41531475 | ID=MS.gene068856.t1.exon11;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41531475 | 41531575 | 41531475 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41531721 | 41531795 | 41531721 | ID=MS.gene068856.t1.exon12;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41531721 | 41531795 | 41531721 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
chr3.2 | exon | 41532196 | 41532255 | 41532196 | ID=MS.gene068856.t1.exon13;Parent=MS.gene068856.t1 |
chr3.2 | CDS | 41532196 | 41532255 | 41532196 | ID=cds.MS.gene068856.t1;Parent=MS.gene068856.t1 |
Gene Sequence |
Protein sequence |