Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069003.t1 | XP_003623359.1 | 96.9 | 260 | 4 | 2 | 1 | 260 | 1 | 256 | 4.80E-136 | 493.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069003.t1 | P19975 | 82.9 | 258 | 37 | 3 | 1 | 258 | 1 | 251 | 5.8e-114 | 411.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069003.t1 | G7KT76 | 96.9 | 260 | 4 | 2 | 1 | 260 | 1 | 256 | 3.5e-136 | 493.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069003 | MS.gene071223 | PPI |
| MS.gene07505 | MS.gene069003 | PPI |
| MS.gene86821 | MS.gene069003 | PPI |
| MS.gene069003 | MS.gene29686 | PPI |
| MS.gene76087 | MS.gene069003 | PPI |
| MS.gene069003 | MS.gene94217 | PPI |
| MS.gene069003 | MS.gene004968 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069003.t1 | MTR_7g069980 | 96.923 | 260 | 4 | 2 | 1 | 260 | 1 | 256 | 0.0 | 509 |
| MS.gene069003.t1 | MTR_4g014540 | 74.902 | 255 | 59 | 2 | 1 | 255 | 1 | 250 | 3.43e-127 | 361 |
| MS.gene069003.t1 | MTR_5g083170 | 65.833 | 240 | 75 | 2 | 27 | 259 | 9 | 248 | 5.07e-107 | 310 |
| MS.gene069003.t1 | MTR_5g083170 | 64.481 | 183 | 58 | 2 | 27 | 202 | 9 | 191 | 1.98e-74 | 225 |
| MS.gene069003.t1 | MTR_5g072560 | 69.600 | 125 | 38 | 0 | 131 | 255 | 18 | 142 | 3.09e-57 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069003.t1 | AT5G01600 | 75.122 | 205 | 51 | 0 | 51 | 255 | 51 | 255 | 2.08e-114 | 329 |
| MS.gene069003.t1 | AT2G40300 | 64.286 | 238 | 78 | 2 | 23 | 254 | 21 | 257 | 1.17e-104 | 304 |
| MS.gene069003.t1 | AT3G11050 | 71.782 | 202 | 57 | 0 | 56 | 257 | 51 | 252 | 1.19e-102 | 299 |
| MS.gene069003.t1 | AT3G56090 | 73.196 | 194 | 52 | 0 | 61 | 254 | 62 | 255 | 5.05e-100 | 293 |
| MS.gene069003.t1 | AT3G61010 | 68.000 | 50 | 16 | 0 | 102 | 151 | 369 | 418 | 1.73e-15 | 75.9 |
| MS.gene069003.t1 | AT3G61010 | 68.000 | 50 | 16 | 0 | 102 | 151 | 369 | 418 | 1.73e-15 | 75.9 |
Find 55 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAAAGTTTCATCCTTTAA+TGG | 0.172298 | 7.2:+33632203 | MS.gene069003:CDS |
| TATTGTTCCTCAAGTTTCTT+TGG | 0.188521 | 7.2:+33632421 | MS.gene069003:CDS |
| CCATGTTTGCATACTTTGAT+AGG | 0.193427 | 7.2:+33633456 | MS.gene069003:CDS |
| GAATTTGAGCATGTCGAAAA+AGG | 0.241392 | 7.2:+33634186 | MS.gene069003:CDS |
| TATTGCTTCTTTCAGGTGTT+TGG | 0.269468 | 7.2:+33635158 | MS.gene069003:intron |
| TGAGAGAGAAAATCCATTAA+AGG | 0.340654 | 7.2:-33632216 | None:intergenic |
| GCAGCAACGGTTCCTTTGAC+TGG | 0.348801 | 7.2:+33632347 | MS.gene069003:CDS |
| AAGAAATGGGGTGGTGGAAC+TGG | 0.367320 | 7.2:+33632308 | MS.gene069003:CDS |
| AGTTGGTAAGATTAAGAAAT+GGG | 0.368351 | 7.2:+33632295 | MS.gene069003:CDS |
| TTCTGAGGGCACATTCTTGA+TGG | 0.384093 | 7.2:-33634166 | None:intergenic |
| AAAGAAACTTGAGGAACAAT+AGG | 0.385312 | 7.2:-33632419 | None:intergenic |
| TGAAAAGCTTATGAAATATC+AGG | 0.391882 | 7.2:+33633645 | MS.gene069003:CDS |
| CAGCAACGGTTCCTTTGACT+GGG | 0.392148 | 7.2:+33632348 | MS.gene069003:CDS |
| TATGGAACTAGCTCTGTCTT+TGG | 0.418541 | 7.2:+33634398 | MS.gene069003:CDS |
| CAATGAAGCTTGTCATTTGA+GGG | 0.428895 | 7.2:-33634589 | None:intergenic |
| TGTTGAAATCAGGTTCTTCA+AGG | 0.448017 | 7.2:+33633594 | MS.gene069003:intron |
| TGGTGGAACTGGAAAGGTTA+CGG | 0.455293 | 7.2:+33632319 | MS.gene069003:CDS |
| GGTTATATTTGAACCGTTTG+AGG | 0.463497 | 7.2:+33632370 | MS.gene069003:CDS |
| TTTGGAAATGGTGTTAAGAA+GGG | 0.465155 | 7.2:+33632245 | MS.gene069003:CDS |
| AGGAATCTAGTGAAGAAGAG+AGG | 0.482018 | 7.2:+33633614 | MS.gene069003:CDS |
| TAATTTGTTTAGAACGTTCG+TGG | 0.489568 | 7.2:+33634123 | MS.gene069003:intron |
| TCAATGAAGCTTGTCATTTG+AGG | 0.489748 | 7.2:-33634590 | None:intergenic |
| CATGTTTGCATACTTTGATA+GGG | 0.500774 | 7.2:+33633457 | MS.gene069003:CDS |
| GAGTTGGTAAGATTAAGAAA+TGG | 0.503130 | 7.2:+33632294 | MS.gene069003:CDS |
| TCTTTCTTAACCTCCTCAAA+CGG | 0.512013 | 7.2:-33632383 | None:intergenic |
| TCTGAGGGCACATTCTTGAT+GGG | 0.512774 | 7.2:-33634165 | None:intergenic |
| TTCGACATGCTCAAATTCTG+AGG | 0.522929 | 7.2:-33634181 | None:intergenic |
| GTGTCTCAATTGAGAAGGGT+TGG | 0.530310 | 7.2:+33634808 | MS.gene069003:CDS |
| CCTATCAAAGTATGCAAACA+TGG | 0.532849 | 7.2:-33633456 | None:intergenic |
| GGAATCTAGTGAAGAAGAGA+GGG | 0.536755 | 7.2:+33633615 | MS.gene069003:CDS |
| ATGGGGTGGTGGAACTGGAA+AGG | 0.540294 | 7.2:+33632313 | MS.gene069003:CDS |
| TCATTTGAGGGTCATTGTTG+CGG | 0.541374 | 7.2:-33634577 | None:intergenic |
| AGCAACGGTTCCTTTGACTG+GGG | 0.545713 | 7.2:+33632349 | MS.gene069003:CDS |
| TAGGGACAATGTGGCACTCA+GGG | 0.545838 | 7.2:+33633475 | MS.gene069003:CDS |
| TCAATTGAGAAGGGTTGGAA+AGG | 0.551958 | 7.2:+33634813 | MS.gene069003:CDS |
| AGAAGGGTTGGAAAGGGTCA+TGG | 0.553158 | 7.2:+33634820 | MS.gene069003:CDS |
| ATAGGGACAATGTGGCACTC+AGG | 0.553669 | 7.2:+33633474 | MS.gene069003:CDS |
| AATATGTGTCTCAATTGAGA+AGG | 0.565002 | 7.2:+33634803 | MS.gene069003:CDS |
| CAATTGAGAAGGGTTGGAAA+GGG | 0.565267 | 7.2:+33634814 | MS.gene069003:CDS |
| GGTTACGGTTTGTGCAGCAA+CGG | 0.580360 | 7.2:+33632334 | MS.gene069003:CDS |
| TCGACATGCTCAAATTCTGA+GGG | 0.580414 | 7.2:-33634180 | None:intergenic |
| AAGATTAAGAAATGGGGTGG+TGG | 0.581479 | 7.2:+33632302 | MS.gene069003:CDS |
| TCAAATATAACCCCAGTCAA+AGG | 0.586646 | 7.2:-33632359 | None:intergenic |
| CTGAGGGCACATTCTTGATG+GGG | 0.605193 | 7.2:-33634164 | None:intergenic |
| CAAAGTATGCAAACATGGAG+TGG | 0.606862 | 7.2:-33633451 | None:intergenic |
| TATATTTGAACCGTTTGAGG+AGG | 0.613079 | 7.2:+33632373 | MS.gene069003:CDS |
| GTTGGTAAGATTAAGAAATG+GGG | 0.622875 | 7.2:+33632296 | MS.gene069003:CDS |
| TGATCAAAGACTTCTTCATG+AGG | 0.628033 | 7.2:+33635186 | MS.gene069003:CDS |
| ATATGTGTCTCAATTGAGAA+GGG | 0.632300 | 7.2:+33634804 | MS.gene069003:CDS |
| TGACGAGCCAAAGAAACTTG+AGG | 0.656795 | 7.2:-33632428 | None:intergenic |
| GGTAAGATTAAGAAATGGGG+TGG | 0.657489 | 7.2:+33632299 | MS.gene069003:CDS |
| AAACATGGAGTGGTACACAT+AGG | 0.675664 | 7.2:-33633441 | None:intergenic |
| TTTGTTTAGAACGTTCGTGG+TGG | 0.678558 | 7.2:+33634126 | MS.gene069003:intron |
| AGGGACAATGTGGCACTCAG+GGG | 0.690043 | 7.2:+33633476 | MS.gene069003:CDS |
| ATACTTTGATAGGGACAATG+TGG | 0.721777 | 7.2:+33633466 | MS.gene069003:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATTAGTAGTACTAATT+TGG | - | chr7.2:33633107-33633126 | None:intergenic | 15.0% |
| !! | AACAAGAATTATATCTTGAT+TGG | + | chr7.2:33632723-33632742 | MS.gene069003:intron | 20.0% |
| !! | ACAAAAAAAAATACAGAATG+AGG | - | chr7.2:33632516-33632535 | None:intergenic | 20.0% |
| !! | ATTTATATATTGCTTCTTTC+AGG | + | chr7.2:33635151-33635170 | MS.gene069003:intron | 20.0% |
| !! | CTAAGATTTAAATGATCAAT+TGG | + | chr7.2:33632664-33632683 | MS.gene069003:intron | 20.0% |
| !! | TTAATGTAAACTACTGAATA+TGG | - | chr7.2:33634334-33634353 | None:intergenic | 20.0% |
| !! | TTTGAAGATTTGTGAAAAAT+AGG | + | chr7.2:33634547-33634566 | MS.gene069003:intron | 20.0% |
| !!! | AAATTCTTTTAGAAAATCAG+AGG | - | chr7.2:33633046-33633065 | None:intergenic | 20.0% |
| !!! | ACTACAATCATTTTTCATAT+TGG | + | chr7.2:33634858-33634877 | MS.gene069003:intron | 20.0% |
| !!! | ATGTGAGATTTGAAATTTAT+TGG | + | chr7.2:33633149-33633168 | MS.gene069003:intron | 20.0% |
| !!! | TAGGAATTCATATAAACTTT+TGG | + | chr7.2:33634651-33634670 | MS.gene069003:intron | 20.0% |
| !!! | TGTGAGATTTGAAATTTATT+GGG | + | chr7.2:33633150-33633169 | MS.gene069003:intron | 20.0% |
| !!! | TTCATTGAACATGAATTTTT+GGG | + | chr7.2:33634605-33634624 | MS.gene069003:CDS | 20.0% |
| !!! | TTTCTTTTATTGTTGAAATC+AGG | + | chr7.2:33633584-33633603 | MS.gene069003:intron | 20.0% |
| ! | ATAGCTGAAACAATAAATAG+AGG | - | chr7.2:33634381-33634400 | None:intergenic | 25.0% |
| ! | ATCAATTAGCATAGTAACAA+TGG | - | chr7.2:33633381-33633400 | None:intergenic | 25.0% |
| ! | GAAACAATAAATAGAGGAAA+AGG | - | chr7.2:33634375-33634394 | None:intergenic | 25.0% |
| ! | TATTTGATCTGTAGTTGAAA+AGG | + | chr7.2:33634516-33634535 | MS.gene069003:intron | 25.0% |
| ! | TCAATTAGCATAGTAACAAT+GGG | - | chr7.2:33633380-33633399 | None:intergenic | 25.0% |
| ! | TCTATTTATTGTTTCAGCTA+TGG | + | chr7.2:33634380-33634399 | MS.gene069003:intron | 25.0% |
| ! | TGAAAAGCTTATGAAATATC+AGG | + | chr7.2:33633645-33633664 | MS.gene069003:CDS | 25.0% |
| ! | TGTTGATACTCATTTAGATT+TGG | + | chr7.2:33633218-33633237 | MS.gene069003:intron | 25.0% |
| ! | TTAACACCATTTCCAAAAAT+GGG | - | chr7.2:33632242-33632261 | None:intergenic | 25.0% |
| !! | AAAGTTGCTTTAACAATGTT+AGG | + | chr7.2:33634692-33634711 | MS.gene069003:intron | 25.0% |
| !! | AAGTTGCTTTAACAATGTTA+GGG | + | chr7.2:33634693-33634712 | MS.gene069003:intron | 25.0% |
| !! | ACATATAATTTTCTTTCGTC+AGG | + | chr7.2:33634756-33634775 | MS.gene069003:intron | 25.0% |
| !! | ATGTTAGGGATTCATATTTT+TGG | + | chr7.2:33634707-33634726 | MS.gene069003:intron | 25.0% |
| !! | CTTCATTGAACATGAATTTT+TGG | + | chr7.2:33634604-33634623 | MS.gene069003:CDS | 25.0% |
| !! | TCTAAAGTTTCATCCTTTAA+TGG | + | chr7.2:33632203-33632222 | MS.gene069003:CDS | 25.0% |
| !!! | AGTTGGTAAGATTAAGAAAT+GGG | + | chr7.2:33632295-33632314 | MS.gene069003:CDS | 25.0% |
| !!! | AGTTTTAGCTTCTTATCTTT+TGG | - | chr7.2:33632798-33632817 | None:intergenic | 25.0% |
| !!! | AGTTTTGATCTAACTTTAAG+CGG | + | chr7.2:33632899-33632918 | MS.gene069003:intron | 25.0% |
| !!! | ATTTTTTCTTTTGCATGCAT+TGG | + | chr7.2:33633349-33633368 | MS.gene069003:intron | 25.0% |
| AAAGAAACTTGAGGAACAAT+AGG | - | chr7.2:33632422-33632441 | None:intergenic | 30.0% | |
| AATATGTGTCTCAATTGAGA+AGG | + | chr7.2:33634803-33634822 | MS.gene069003:CDS | 30.0% | |
| AATTTGAGCATGTCGAAAAA+GGG | + | chr7.2:33634187-33634206 | MS.gene069003:CDS | 30.0% | |
| ATAAATGCATGTGTTGTATC+CGG | + | chr7.2:33635052-33635071 | MS.gene069003:intron | 30.0% | |
| ATATGTGTCTCAATTGAGAA+GGG | + | chr7.2:33634804-33634823 | MS.gene069003:CDS | 30.0% | |
| CATGTTTGCATACTTTGATA+GGG | + | chr7.2:33633457-33633476 | MS.gene069003:CDS | 30.0% | |
| CTTAACACCATTTCCAAAAA+TGG | - | chr7.2:33632243-33632262 | None:intergenic | 30.0% | |
| CTTCATAGTGTAACACTATT+TGG | + | chr7.2:33633909-33633928 | MS.gene069003:intron | 30.0% | |
| GAAATTTATTGGGATCAAGT+TGG | + | chr7.2:33633160-33633179 | MS.gene069003:intron | 30.0% | |
| GAAGATTTGTGAAAAATAGG+TGG | + | chr7.2:33634550-33634569 | MS.gene069003:intron | 30.0% | |
| GGAGTAAGTAAGTTCAAATA+AGG | - | chr7.2:33633708-33633727 | None:intergenic | 30.0% | |
| TAGGTCTTACAAGTACTTAT+TGG | - | chr7.2:33633729-33633748 | None:intergenic | 30.0% | |
| TATTGTTCCTCAAGTTTCTT+TGG | + | chr7.2:33632421-33632440 | MS.gene069003:CDS | 30.0% | |
| TGAGAGAGAAAATCCATTAA+AGG | - | chr7.2:33632219-33632238 | None:intergenic | 30.0% | |
| ! | AACTTTTCTAACCATGTTGT+TGG | + | chr7.2:33632640-33632659 | MS.gene069003:intron | 30.0% |
| ! | ACTTTTCTAACCATGTTGTT+GGG | + | chr7.2:33632641-33632660 | MS.gene069003:intron | 30.0% |
| ! | ATCTTTTGGTAAACTAGAGT+TGG | - | chr7.2:33632784-33632803 | None:intergenic | 30.0% |
| ! | GCTAAGTTTTACTTACTTTG+AGG | + | chr7.2:33632757-33632776 | MS.gene069003:intron | 30.0% |
| ! | GTTGGTAAGATTAAGAAATG+GGG | + | chr7.2:33632296-33632315 | MS.gene069003:CDS | 30.0% |
| ! | TATAATTTTCTTTCGTCAGG+TGG | + | chr7.2:33634759-33634778 | MS.gene069003:intron | 30.0% |
| ! | TTTGGAAATGGTGTTAAGAA+GGG | + | chr7.2:33632245-33632264 | MS.gene069003:CDS | 30.0% |
| !! | GAGTTGGTAAGATTAAGAAA+TGG | + | chr7.2:33632294-33632313 | MS.gene069003:CDS | 30.0% |
| !! | TAAGTTAGCTCTGTACTTTA+GGG | + | chr7.2:33633669-33633688 | MS.gene069003:intron | 30.0% |
| !! | TAATTTGTTTAGAACGTTCG+TGG | + | chr7.2:33634123-33634142 | MS.gene069003:intron | 30.0% |
| !! | TTAAGTTAGCTCTGTACTTT+AGG | + | chr7.2:33633668-33633687 | MS.gene069003:intron | 30.0% |
| !! | TTTTGGAAATGGTGTTAAGA+AGG | + | chr7.2:33632244-33632263 | MS.gene069003:CDS | 30.0% |
| AATAAGCTGAAAACAACTCG+TGG | - | chr7.2:33633965-33633984 | None:intergenic | 35.0% | |
| AGATCCTAGAGCTTTCTTAA+TGG | - | chr7.2:33633280-33633299 | None:intergenic | 35.0% | |
| ATACTTTGATAGGGACAATG+TGG | + | chr7.2:33633466-33633485 | MS.gene069003:CDS | 35.0% | |
| ATAGACTTGCCCACTAAAAT+TGG | - | chr7.2:33632875-33632894 | None:intergenic | 35.0% | |
| ATGTCTTTAATGTGAAGTGC+CGG | - | chr7.2:33634933-33634952 | None:intergenic | 35.0% | |
| ATTTGAGCATGTCGAAAAAG+GGG | + | chr7.2:33634188-33634207 | MS.gene069003:CDS | 35.0% | |
| CCATGTTTGCATACTTTGAT+AGG | + | chr7.2:33633456-33633475 | MS.gene069003:CDS | 35.0% | |
| CCTATCAAAGTATGCAAACA+TGG | - | chr7.2:33633459-33633478 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTCTTC+AGG | + | chr7.2:33633979-33633998 | MS.gene069003:intron | 35.0% | |
| CTTCACATTAAAGACATGTC+TGG | + | chr7.2:33634936-33634955 | MS.gene069003:intron | 35.0% | |
| CTTGTAAGACCTATGAATCA+CGG | + | chr7.2:33633736-33633755 | MS.gene069003:intron | 35.0% | |
| GAAAGTTGTTTATCCAGACA+TGG | + | chr7.2:33634026-33634045 | MS.gene069003:intron | 35.0% | |
| GAATTTGAGCATGTCGAAAA+AGG | + | chr7.2:33634186-33634205 | MS.gene069003:CDS | 35.0% | |
| GATTTGTGAAAAATAGGTGG+CGG | + | chr7.2:33634553-33634572 | MS.gene069003:intron | 35.0% | |
| GCTTTCTTAATGGTAGATTC+TGG | - | chr7.2:33633270-33633289 | None:intergenic | 35.0% | |
| GGTTATATTTGAACCGTTTG+AGG | + | chr7.2:33632370-33632389 | MS.gene069003:CDS | 35.0% | |
| TAAATCTTAGCCCAACAACA+TGG | - | chr7.2:33632654-33632673 | None:intergenic | 35.0% | |
| TACTCCATGAAACACTTAGA+CGG | - | chr7.2:33635087-33635106 | None:intergenic | 35.0% | |
| TATATTTGAACCGTTTGAGG+AGG | + | chr7.2:33632373-33632392 | MS.gene069003:CDS | 35.0% | |
| TATCAGACATTGACATGTGT+CGG | - | chr7.2:33634965-33634984 | None:intergenic | 35.0% | |
| TATGAAGCACAAACACTCAT+CGG | - | chr7.2:33633896-33633915 | None:intergenic | 35.0% | |
| TATGTGTAAGGCAAAGTTTG+TGG | - | chr7.2:33634885-33634904 | None:intergenic | 35.0% | |
| TCAAATATAACCCCAGTCAA+AGG | - | chr7.2:33632362-33632381 | None:intergenic | 35.0% | |
| TCTACCATTAAGAAAGCTCT+AGG | + | chr7.2:33633273-33633292 | MS.gene069003:intron | 35.0% | |
| TCTTTCTTAACCTCCTCAAA+CGG | - | chr7.2:33632386-33632405 | None:intergenic | 35.0% | |
| TGATCAAAGACTTCTTCATG+AGG | + | chr7.2:33635186-33635205 | MS.gene069003:CDS | 35.0% | |
| TGTTGAAATCAGGTTCTTCA+AGG | + | chr7.2:33633594-33633613 | MS.gene069003:intron | 35.0% | |
| TTCAGTGTAATCACATGTGT+CGG | + | chr7.2:33633817-33633836 | MS.gene069003:intron | 35.0% | |
| ! | CAATGAAGCTTGTCATTTGA+GGG | - | chr7.2:33634592-33634611 | None:intergenic | 35.0% |
| ! | CTTCGTGTTGCAAACTTTTT+AGG | + | chr7.2:33634482-33634501 | MS.gene069003:intron | 35.0% |
| ! | TATTGCTTCTTTCAGGTGTT+TGG | + | chr7.2:33635158-33635177 | MS.gene069003:intron | 35.0% |
| ! | TCAATGAAGCTTGTCATTTG+AGG | - | chr7.2:33634593-33634612 | None:intergenic | 35.0% |
| ! | TCTTTTTGTGATGTGAGAGT+TGG | + | chr7.2:33632278-33632297 | MS.gene069003:CDS | 35.0% |
| ! | TTTTCATTTGTGTGACAGTG+TGG | + | chr7.2:33633406-33633425 | MS.gene069003:intron | 35.0% |
| ! | TTTTCTCTCTCACCCATTTT+TGG | + | chr7.2:33632227-33632246 | MS.gene069003:CDS | 35.0% |
| !!! | ACATGAATTTTTGGGTGAAC+AGG | + | chr7.2:33634613-33634632 | MS.gene069003:CDS | 35.0% |
| AAACATGGAGTGGTACACAT+AGG | - | chr7.2:33633444-33633463 | None:intergenic | 40.0% | |
| AAACTGTCCTGAAGAGCTTA+TGG | - | chr7.2:33633989-33634008 | None:intergenic | 40.0% | |
| AAGATTAAGAAATGGGGTGG+TGG | + | chr7.2:33632302-33632321 | MS.gene069003:CDS | 40.0% | |
| ACGAAGCTAAATGGACAAAG+AGG | - | chr7.2:33634468-33634487 | None:intergenic | 40.0% | |
| AGACCTATGAATCACGGATA+CGG | + | chr7.2:33633742-33633761 | MS.gene069003:intron | 40.0% | |
| AGGAATCTAGTGAAGAAGAG+AGG | + | chr7.2:33633614-33633633 | MS.gene069003:CDS | 40.0% | |
| CAAAGTATGCAAACATGGAG+TGG | - | chr7.2:33633454-33633473 | None:intergenic | 40.0% | |
| CAATTGAGAAGGGTTGGAAA+GGG | + | chr7.2:33634814-33634833 | MS.gene069003:CDS | 40.0% | |
| CAGGTGAAACTCATAGTACT+AGG | + | chr7.2:33634632-33634651 | MS.gene069003:intron | 40.0% | |
| GAAAAAGGGGATGCATTACA+TGG | + | chr7.2:33634201-33634220 | MS.gene069003:CDS | 40.0% | |
| GGAATCTAGTGAAGAAGAGA+GGG | + | chr7.2:33633615-33633634 | MS.gene069003:CDS | 40.0% | |
| GGTAAGATTAAGAAATGGGG+TGG | + | chr7.2:33632299-33632318 | MS.gene069003:CDS | 40.0% | |
| GTATGATACTTCCTCCTATG+TGG | + | chr7.2:33635104-33635123 | MS.gene069003:intron | 40.0% | |
| GTTTGCAACACGAAGCTAAA+TGG | - | chr7.2:33634477-33634496 | None:intergenic | 40.0% | |
| TCAATTGAGAAGGGTTGGAA+AGG | + | chr7.2:33634813-33634832 | MS.gene069003:CDS | 40.0% | |
| TCATTTGAGGGTCATTGTTG+CGG | - | chr7.2:33634580-33634599 | None:intergenic | 40.0% | |
| TCGACATGCTCAAATTCTGA+GGG | - | chr7.2:33634183-33634202 | None:intergenic | 40.0% | |
| TCTTAATGGTAGATTCTGGC+TGG | - | chr7.2:33633266-33633285 | None:intergenic | 40.0% | |
| TTCGACATGCTCAAATTCTG+AGG | - | chr7.2:33634184-33634203 | None:intergenic | 40.0% | |
| ! | ACATCGAAGTATTCGGAAAC+AGG | - | chr7.2:33634265-33634284 | None:intergenic | 40.0% |
| ! | CCCACTAAAATTGGTAGTAG+GGG | - | chr7.2:33632866-33632885 | None:intergenic | 40.0% |
| ! | GCCCACTAAAATTGGTAGTA+GGG | - | chr7.2:33632867-33632886 | None:intergenic | 40.0% |
| ! | GCTGCAAACATCGAAGTATT+CGG | - | chr7.2:33634272-33634291 | None:intergenic | 40.0% |
| ! | TCCCCTACTACCAATTTTAG+TGG | + | chr7.2:33632862-33632881 | MS.gene069003:intron | 40.0% |
| ! | TGCCCACTAAAATTGGTAGT+AGG | - | chr7.2:33632868-33632887 | None:intergenic | 40.0% |
| ! | TTTGTTTAGAACGTTCGTGG+TGG | + | chr7.2:33634126-33634145 | MS.gene069003:intron | 40.0% |
| !! | CCCCTACTACCAATTTTAGT+GGG | + | chr7.2:33632863-33632882 | MS.gene069003:intron | 40.0% |
| !! | CTCTCACCCATTTTTGGAAA+TGG | + | chr7.2:33632233-33632252 | MS.gene069003:CDS | 40.0% |
| !! | TATGGAACTAGCTCTGTCTT+TGG | + | chr7.2:33634398-33634417 | MS.gene069003:CDS | 40.0% |
| AGTTGTGAAGCTGTGCGTTA+TGG | + | chr7.2:33634304-33634323 | MS.gene069003:intron | 45.0% | |
| ATCGACGATCTATGTAGCAC+CGG | + | chr7.2:33634911-33634930 | MS.gene069003:intron | 45.0% | |
| ATGAGCATCAAAGCCATGTC+TGG | - | chr7.2:33634042-33634061 | None:intergenic | 45.0% | |
| ATTGGTCCTATCGGATTCGT+CGG | + | chr7.2:33632944-33632963 | MS.gene069003:intron | 45.0% | |
| CTGATATTGACACGTATGCG+TGG | + | chr7.2:33634979-33634998 | MS.gene069003:intron | 45.0% | |
| GGATAGATACACTCCATGCA+AGG | + | chr7.2:33633239-33633258 | MS.gene069003:intron | 45.0% | |
| GTCAGCGTTCGTATCATGTA+CGG | - | chr7.2:33633771-33633790 | None:intergenic | 45.0% | |
| GTCGATAGGCGTTATGTGTA+AGG | - | chr7.2:33634897-33634916 | None:intergenic | 45.0% | |
| GTGCTACATAGATCGTCGAT+AGG | - | chr7.2:33634911-33634930 | None:intergenic | 45.0% | |
| GTGTCCGTCTAAGTGTTTCA+TGG | + | chr7.2:33635080-33635099 | MS.gene069003:intron | 45.0% | |
| GTGTCTCAATTGAGAAGGGT+TGG | + | chr7.2:33634808-33634827 | MS.gene069003:CDS | 45.0% | |
| TGACGAGCCAAAGAAACTTG+AGG | - | chr7.2:33632431-33632450 | None:intergenic | 45.0% | |
| TGATACTTCCTCCTATGTGG+TGG | + | chr7.2:33635107-33635126 | MS.gene069003:intron | 45.0% | |
| TGGTGGAACTGGAAAGGTTA+CGG | + | chr7.2:33632319-33632338 | MS.gene069003:CDS | 45.0% | |
| TGTCCGTATCCGTGATTCAT+AGG | - | chr7.2:33633748-33633767 | None:intergenic | 45.0% | |
| ! | GGCTGTATGATTGGTCCTAT+CGG | + | chr7.2:33632935-33632954 | MS.gene069003:intron | 45.0% |
| ! | TACATGGTGAGCTTGTTTGC+TGG | + | chr7.2:33634217-33634236 | MS.gene069003:intron | 45.0% |
| ! | TCTGAGGGCACATTCTTGAT+GGG | - | chr7.2:33634168-33634187 | None:intergenic | 45.0% |
| ! | TTCTGAGGGCACATTCTTGA+TGG | - | chr7.2:33634169-33634188 | None:intergenic | 45.0% |
| !! | CTTAAGAGTGTCCACCACAT+AGG | - | chr7.2:33635121-33635140 | None:intergenic | 45.0% |
| !! | TAGCTCTGTACTTTAGGGTC+TGG | + | chr7.2:33633674-33633693 | MS.gene069003:intron | 45.0% |
| !!! | ATTTTATTTTTTTTAAAACT+TGG | - | chr7.2:33632985-33633004 | None:intergenic | 5.0% |
| ACTTAGACGGACACGAACAC+CGG | - | chr7.2:33635074-33635093 | None:intergenic | 50.0% | |
| AGAAGGGTTGGAAAGGGTCA+TGG | + | chr7.2:33634820-33634839 | MS.gene069003:CDS | 50.0% | |
| AGCAACGGTTCCTTTGACTG+GGG | + | chr7.2:33632349-33632368 | MS.gene069003:CDS | 50.0% | |
| ATAGGGACAATGTGGCACTC+AGG | + | chr7.2:33633474-33633493 | MS.gene069003:CDS | 50.0% | |
| CAAGAACCGACGAATCCGAT+AGG | - | chr7.2:33632953-33632972 | None:intergenic | 50.0% | |
| CAATCATACAGCCCATTCGC+GGG | - | chr7.2:33632928-33632947 | None:intergenic | 50.0% | |
| CAGCAACGGTTCCTTTGACT+GGG | + | chr7.2:33632348-33632367 | MS.gene069003:CDS | 50.0% | |
| CCAATCATACAGCCCATTCG+CGG | - | chr7.2:33632929-33632948 | None:intergenic | 50.0% | |
| GCACAAACACTCATCGGATC+AGG | - | chr7.2:33633890-33633909 | None:intergenic | 50.0% | |
| GGTTACGGTTTGTGCAGCAA+CGG | + | chr7.2:33632334-33632353 | MS.gene069003:CDS | 50.0% | |
| TAGGGACAATGTGGCACTCA+GGG | + | chr7.2:33633475-33633494 | MS.gene069003:CDS | 50.0% | |
| ! | CTGAGGGCACATTCTTGATG+GGG | - | chr7.2:33634167-33634186 | None:intergenic | 50.0% |
| !! | AAGAAATGGGGTGGTGGAAC+TGG | + | chr7.2:33632308-33632327 | MS.gene069003:CDS | 50.0% |
| !! | AAGAGTGTCCACCACATAGG+AGG | - | chr7.2:33635118-33635137 | None:intergenic | 50.0% |
| !! | CTATCGGATTCGTCGGTTCT+TGG | + | chr7.2:33632951-33632970 | MS.gene069003:intron | 50.0% |
| AGGGACAATGTGGCACTCAG+GGG | + | chr7.2:33633476-33633495 | MS.gene069003:CDS | 55.0% | |
| GCAGCAACGGTTCCTTTGAC+TGG | + | chr7.2:33632347-33632366 | MS.gene069003:CDS | 55.0% | |
| TTAAGCGGAGACCCGCGAAT+GGG | + | chr7.2:33632914-33632933 | MS.gene069003:intron | 55.0% | |
| TTTAAGCGGAGACCCGCGAA+TGG | + | chr7.2:33632913-33632932 | MS.gene069003:intron | 55.0% | |
| ! | GATTCTGGCTGGACCTTGCA+TGG | - | chr7.2:33633255-33633274 | None:intergenic | 55.0% |
| !! | ATGGGGTGGTGGAACTGGAA+AGG | + | chr7.2:33632313-33632332 | MS.gene069003:CDS | 55.0% |
| !! | CCGCGAATGGGCTGTATGAT+TGG | + | chr7.2:33632926-33632945 | MS.gene069003:intron | 55.0% |
| !! | TGTCGGTGTCGTGTCAGTGT+CGG | + | chr7.2:33633834-33633853 | MS.gene069003:intron | 55.0% |
| TCATCGGATCAGGCGTGTCC+CGG | - | chr7.2:33633880-33633899 | None:intergenic | 60.0% | |
| ! | GTGTCAGTGTCGGACACCGA+CGG | + | chr7.2:33633844-33633863 | MS.gene069003:intron | 60.0% |
| ! | TGTCAGTGTCGGACACCGAC+GGG | + | chr7.2:33633845-33633864 | MS.gene069003:intron | 60.0% |
| GATCAGGCGTGTCCCGGTGT+CGG | - | chr7.2:33633874-33633893 | None:intergenic | 65.0% | |
| ACCGACGGGTGTCCGACACC+GGG | + | chr7.2:33633859-33633878 | MS.gene069003:intron | 70.0% | |
| CACCGACGGGTGTCCGACAC+CGG | + | chr7.2:33633858-33633877 | MS.gene069003:intron | 70.0% | |
| ! | TCCCGGTGTCGGACACCCGT+CGG | - | chr7.2:33633863-33633882 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 33632188 | 33635222 | 33632188 | ID=MS.gene069003 |
| chr7.2 | mRNA | 33632188 | 33635222 | 33632188 | ID=MS.gene069003.t1;Parent=MS.gene069003 |
| chr7.2 | exon | 33632188 | 33632495 | 33632188 | ID=MS.gene069003.t1.exon1;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33632188 | 33632495 | 33632188 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33633424 | 33633507 | 33633424 | ID=MS.gene069003.t1.exon2;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33633424 | 33633507 | 33633424 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33633606 | 33633666 | 33633606 | ID=MS.gene069003.t1.exon3;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33633606 | 33633666 | 33633606 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33634135 | 33634222 | 33634135 | ID=MS.gene069003.t1.exon4;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33634135 | 33634222 | 33634135 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33634397 | 33634458 | 33634397 | ID=MS.gene069003.t1.exon5;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33634397 | 33634458 | 33634397 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33634569 | 33634634 | 33634569 | ID=MS.gene069003.t1.exon6;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33634569 | 33634634 | 33634569 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33634778 | 33634841 | 33634778 | ID=MS.gene069003.t1.exon7;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33634778 | 33634841 | 33634778 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| chr7.2 | exon | 33635173 | 33635222 | 33635173 | ID=MS.gene069003.t1.exon8;Parent=MS.gene069003.t1 |
| chr7.2 | CDS | 33635173 | 33635222 | 33635173 | ID=cds.MS.gene069003.t1;Parent=MS.gene069003.t1 |
| Gene Sequence |
| Protein sequence |
