Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069827.t1 | XP_003596651.1 | 98.5 | 136 | 2 | 0 | 160 | 295 | 161 | 296 | 1.90E-67 | 266.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069827.t1 | Q94C53 | 81.2 | 138 | 24 | 1 | 160 | 295 | 161 | 298 | 5.3e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069827.t1 | G7IJN2 | 98.5 | 136 | 2 | 0 | 160 | 295 | 161 | 296 | 1.3e-67 | 266.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene069827 | 0.812457 | 4.20E-51 | -1.69E-46 |
| MS.gene049786 | MS.gene069827 | 0.808206 | 3.47E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene069827 | 0.80138 | 9.25E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene069827 | 0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene069827 | 0.802979 | 4.34E-49 | -1.69E-46 |
| MS.gene052686 | MS.gene069827 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene069827 | 0.809648 | 1.71E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene069827 | 0.831866 | 1.31E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene069827 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene069827 | 0.813419 | 2.58E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene069827 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene069827 | 0.807745 | 4.35E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene069827 | 0.809911 | 1.50E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene069827 | 0.806088 | 9.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069827.t1 | MTR_2g083200 | 98.311 | 296 | 4 | 1 | 1 | 295 | 1 | 296 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069827.t1 | AT4G27120 | 64.262 | 305 | 92 | 5 | 1 | 295 | 1 | 298 | 4.59e-97 | 288 |
| MS.gene069827.t1 | AT4G27120 | 64.262 | 305 | 92 | 5 | 1 | 295 | 1 | 298 | 4.59e-97 | 288 |
| MS.gene069827.t1 | AT4G27120 | 75.000 | 228 | 47 | 4 | 76 | 295 | 4 | 229 | 6.65e-86 | 257 |
Find 67 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATATATTCAACAAAAT+TGG | 0.202421 | 2.1:+17882358 | None:intergenic |
| GGTTTGATTTACTAGCTAAA+TGG | 0.210956 | 2.1:+17879723 | None:intergenic |
| TTCTGCAGCAAGATCTTCTA+AGG | 0.265042 | 2.1:+17882134 | None:intergenic |
| AATAAACCTTGTTGCGTTGC+AGG | 0.302830 | 2.1:+17885032 | None:intergenic |
| TCCTCAGCATAATGAGTCTT+TGG | 0.336486 | 2.1:+17879683 | None:intergenic |
| GGCCAAAGCATCAAAGAAAA+AGG | 0.344496 | 2.1:-17884177 | MS.gene069827:CDS |
| CTTTGACTGCCGAGCTTCTT+CGG | 0.373097 | 2.1:+17882666 | None:intergenic |
| TTTCGGGTGTCATGGATGAT+AGG | 0.388749 | 2.1:-17879826 | MS.gene069827:CDS |
| GGATGAAGAGCGTGAGGCAC+AGG | 0.396546 | 2.1:-17882611 | MS.gene069827:CDS |
| GTTTGATTTACTAGCTAAAT+GGG | 0.400098 | 2.1:+17879724 | None:intergenic |
| TATCAATCGCATCACATCTC+TGG | 0.405277 | 2.1:-17880300 | MS.gene069827:CDS |
| CGTGCAGCAGGTTCTCTAAC+CGG | 0.424599 | 2.1:+17885122 | None:intergenic |
| TTGGCTCTAAATCAATGAAC+TGG | 0.430161 | 2.1:+17879702 | None:intergenic |
| AGAGGAAGCCAAAGCTCAAA+AGG | 0.449793 | 2.1:-17882492 | MS.gene069827:CDS |
| CGTCGGAGAACGGTTGCGTC+TGG | 0.451265 | 2.1:-17885077 | MS.gene069827:CDS |
| CACTAATTCCACTCTACCTA+TGG | 0.452049 | 2.1:-17885292 | MS.gene069827:CDS |
| GTAGCGGTGGCACGTGCAGC+AGG | 0.458752 | 2.1:+17885110 | None:intergenic |
| TTCCTCCGAAGAATCTCATC+AGG | 0.463827 | 2.1:-17885234 | MS.gene069827:intron |
| AGGAACTCAAAAGGCAAGAG+AGG | 0.466995 | 2.1:-17884157 | MS.gene069827:CDS |
| GCAAACCTGATGAGATTCTT+CGG | 0.472566 | 2.1:+17885229 | None:intergenic |
| TTCAGAAATGCGGAGGTTGA+AGG | 0.477745 | 2.1:-17882632 | MS.gene069827:CDS |
| CCGCTACTCGCCGCATGCGT+CGG | 0.483491 | 2.1:-17885094 | MS.gene069827:CDS |
| TCGCCGCATGCGTCGGAGAA+CGG | 0.485918 | 2.1:-17885087 | MS.gene069827:CDS |
| AGGTCGGCTTTCGGGTGTCA+TGG | 0.491989 | 2.1:-17879834 | MS.gene069827:CDS |
| AGCTCAAAAGGCTAGGGAAG+AGG | 0.494792 | 2.1:-17882480 | MS.gene069827:CDS |
| ACCTCCGCATTTCTGAATAA+CGG | 0.508197 | 2.1:+17882638 | None:intergenic |
| TTCGGGTGTCATGGATGATA+GGG | 0.512596 | 2.1:-17879825 | MS.gene069827:CDS |
| CATCACATCTCTGGAAAGCA+TGG | 0.517076 | 2.1:-17880291 | MS.gene069827:CDS |
| AATCGCGATGGCGTTTCCAT+AGG | 0.517904 | 2.1:+17885276 | None:intergenic |
| AAGCCAAAGCTCAAAAGGCT+AGG | 0.524157 | 2.1:-17882487 | MS.gene069827:CDS |
| AAAATTCATTTACATCTCAC+AGG | 0.525131 | 2.1:-17879801 | MS.gene069827:CDS |
| AGGTACACTTGAAGAGGAGC+AGG | 0.538791 | 2.1:-17882402 | MS.gene069827:CDS |
| TGAGGCACAGGAGCGTAAGT+TGG | 0.547791 | 2.1:-17882599 | MS.gene069827:intron |
| TTTGAAAGGCCGAAGAAGCT+CGG | 0.559088 | 2.1:-17882675 | MS.gene069827:intron |
| AGCCAAAGCTCAAAAGGCTA+GGG | 0.560451 | 2.1:-17882486 | MS.gene069827:CDS |
| CCGACGCATGCGGCGAGTAG+CGG | 0.568591 | 2.1:+17885094 | None:intergenic |
| GCTCCGCCTGCAACGCAACA+AGG | 0.578148 | 2.1:-17885038 | MS.gene069827:intron |
| TTCGGAGGAAGATGAAGATG+AGG | 0.579662 | 2.1:+17885247 | None:intergenic |
| TTATATTAAGCGACAAGGGA+GGG | 0.582545 | 2.1:-17879756 | MS.gene069827:CDS |
| ACGCATGCGGCGAGTAGCGG+TGG | 0.584210 | 2.1:+17885097 | None:intergenic |
| AGAGAGGGAAGCTCGACGGC+AGG | 0.585418 | 2.1:-17884141 | MS.gene069827:intron |
| GGCAAGAGAGGGAAGCTCGA+CGG | 0.594227 | 2.1:-17884145 | MS.gene069827:CDS |
| TGATGAAGGTACACTTGAAG+AGG | 0.595506 | 2.1:-17882408 | MS.gene069827:CDS |
| GGAACTCAAAAGGCAAGAGA+GGG | 0.598128 | 2.1:-17884156 | MS.gene069827:CDS |
| TGCTGAGGACATTAGTAACA+TGG | 0.604243 | 2.1:-17879669 | MS.gene069827:CDS |
| CAACCGTTCTCCGACGCATG+CGG | 0.605145 | 2.1:+17885084 | None:intergenic |
| TGGCGTTTCCATAGGTAGAG+TGG | 0.606502 | 2.1:+17885284 | None:intergenic |
| ACCGTTATTCAGAAATGCGG+AGG | 0.609223 | 2.1:-17882639 | MS.gene069827:CDS |
| AGAATTTAAATTGCGCACAC+AGG | 0.611949 | 2.1:-17882115 | MS.gene069827:intron |
| TTAGAGTTTGACAAGTGGAA+AGG | 0.613934 | 2.1:-17882446 | MS.gene069827:CDS |
| ATTATATTAAGCGACAAGGG+AGG | 0.616619 | 2.1:-17879757 | MS.gene069827:CDS |
| GAAAGTGACAATGAAGCTGC+TGG | 0.617304 | 2.1:-17884212 | MS.gene069827:CDS |
| ATCACATCTCTGGAAAGCAT+GGG | 0.618886 | 2.1:-17880290 | MS.gene069827:intron |
| TCTGCAGCAAGATCTTCTAA+GGG | 0.619289 | 2.1:+17882135 | None:intergenic |
| AAACCTTGTTGCGTTGCAGG+CGG | 0.623759 | 2.1:+17885035 | None:intergenic |
| CTGCGTTAGAGTTTGACAAG+TGG | 0.625306 | 2.1:-17882451 | MS.gene069827:CDS |
| CTGATTATATTAAGCGACAA+GGG | 0.630907 | 2.1:-17879760 | MS.gene069827:CDS |
| CTGCAATGAGAAGTGTAGAG+AGG | 0.643472 | 2.1:+17885315 | None:intergenic |
| TCGGGTGTCATGGATGATAG+GGG | 0.647827 | 2.1:-17879824 | MS.gene069827:CDS |
| GTTGAAGGATGAAGAGCGTG+AGG | 0.648299 | 2.1:-17882617 | MS.gene069827:CDS |
| ATGAGGATTGAGAATCGCGA+TGG | 0.648606 | 2.1:+17885264 | None:intergenic |
| GCTGATTATATTAAGCGACA+AGG | 0.652115 | 2.1:-17879761 | MS.gene069827:CDS |
| GCCAAAGACTCATTATGCTG+AGG | 0.657399 | 2.1:-17879684 | MS.gene069827:CDS |
| AGCTGCTGGTGATGAGCATG+AGG | 0.671214 | 2.1:-17884198 | MS.gene069827:CDS |
| AAGACCGTTATTCAGAAATG+CGG | 0.686615 | 2.1:-17882642 | MS.gene069827:CDS |
| AACCTGATGAGATTCTTCGG+AGG | 0.714808 | 2.1:+17885232 | None:intergenic |
| TGAGGACATTAGTAACATGG+AGG | 0.752094 | 2.1:-17879666 | MS.gene069827:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATTCTATAAACTTA+AGG | + | chr2.1:17884151-17884170 | None:intergenic | 10.0% |
| !! | TTATAGAATATTTATATACA+AGG | - | chr2.1:17884156-17884175 | MS.gene069827:CDS | 10.0% |
| !! | TTTAATTATATGTATGTATT+AGG | + | chr2.1:17884072-17884091 | None:intergenic | 10.0% |
| !!! | AAATAATATTTTAGATAAAG+GGG | - | chr2.1:17881367-17881386 | MS.gene069827:intron | 10.0% |
| !!! | AGTAATATATTTTTCATTTT+CGG | - | chr2.1:17884626-17884645 | MS.gene069827:intron | 10.0% |
| !!! | GAAATAATATTTTAGATAAA+GGG | - | chr2.1:17881366-17881385 | MS.gene069827:intron | 10.0% |
| !! | AAGAAATATTTGACATAATT+GGG | - | chr2.1:17884910-17884929 | MS.gene069827:intron | 15.0% |
| !! | AATAGAATATAAAAAAGAAG+AGG | + | chr2.1:17882952-17882971 | None:intergenic | 15.0% |
| !! | ATATAAATCATTAAACATAC+TGG | + | chr2.1:17883061-17883080 | None:intergenic | 15.0% |
| !! | CTTTATATATTCAACAAAAT+TGG | + | chr2.1:17882632-17882651 | None:intergenic | 15.0% |
| !! | TAATTGAATTAATTCTTGTT+TGG | - | chr2.1:17880062-17880081 | MS.gene069827:intron | 15.0% |
| !!! | AATAATATTTTAGATAAAGG+GGG | - | chr2.1:17881368-17881387 | MS.gene069827:intron | 15.0% |
| !!! | AATGATTTATTTATTTTGTC+AGG | - | chr2.1:17885133-17885152 | MS.gene069827:intron | 15.0% |
| !!! | AGACTTTTTTGAAAAATAAA+AGG | - | chr2.1:17881344-17881363 | MS.gene069827:intron | 15.0% |
| !!! | CAATTTTGTTGAATATATAA+AGG | - | chr2.1:17882630-17882649 | MS.gene069827:CDS | 15.0% |
| !!! | GATTTAATTTTATTTGTGTT+TGG | - | chr2.1:17879998-17880017 | MS.gene069827:intron | 15.0% |
| !!! | GGAAATAATATTTTAGATAA+AGG | - | chr2.1:17881365-17881384 | MS.gene069827:intron | 15.0% |
| !!! | GTAATATATTTTTCATTTTC+GGG | - | chr2.1:17884627-17884646 | MS.gene069827:intron | 15.0% |
| !!! | TAATATATTTTTCATTTTCG+GGG | - | chr2.1:17884628-17884647 | MS.gene069827:intron | 15.0% |
| !!! | TATATATTTCTTTTGATAGA+TGG | + | chr2.1:17884757-17884776 | None:intergenic | 15.0% |
| !!! | TTTTATCTTACATTTTGTAA+TGG | - | chr2.1:17883497-17883516 | MS.gene069827:intron | 15.0% |
| !! | AAAAGAAGTTAGATATTAGT+GGG | + | chr2.1:17883364-17883383 | None:intergenic | 20.0% |
| !! | AAAAGTTTATTTATGTCCAT+AGG | - | chr2.1:17882714-17882733 | MS.gene069827:intron | 20.0% |
| !! | AAAGTTTATTTATGTCCATA+GGG | - | chr2.1:17882715-17882734 | MS.gene069827:intron | 20.0% |
| !! | AACTTCCAATTAATAATGTT+TGG | + | chr2.1:17883388-17883407 | None:intergenic | 20.0% |
| !! | ACTTCCAATTAATAATGTTT+GGG | + | chr2.1:17883387-17883406 | None:intergenic | 20.0% |
| !! | AGAAACAATATCTTAAAGTT+TGG | - | chr2.1:17884184-17884203 | MS.gene069827:CDS | 20.0% |
| !! | AGATAATACAAAGGATAATT+TGG | - | chr2.1:17881422-17881441 | MS.gene069827:intron | 20.0% |
| !! | ATAAAATTCCATTAATCAGA+TGG | + | chr2.1:17880364-17880383 | None:intergenic | 20.0% |
| !! | ATAATCAATTGTTTAATTCG+TGG | - | chr2.1:17883625-17883644 | MS.gene069827:intron | 20.0% |
| !! | ATCAAATAACAAGTAAGAAA+AGG | + | chr2.1:17881963-17881982 | None:intergenic | 20.0% |
| !! | CAAACAATATAAAAAAGAAG+AGG | + | chr2.1:17882985-17883004 | None:intergenic | 20.0% |
| !! | CATCACTCATTATTAAAAAT+GGG | - | chr2.1:17881803-17881822 | MS.gene069827:intron | 20.0% |
| !! | GAAACAATATCTTAAAGTTT+GGG | - | chr2.1:17884185-17884204 | MS.gene069827:CDS | 20.0% |
| !! | GAAGAAATATTTGACATAAT+TGG | - | chr2.1:17884909-17884928 | MS.gene069827:intron | 20.0% |
| !! | TAATCAATTGTTTAATTCGT+GGG | - | chr2.1:17883626-17883645 | MS.gene069827:intron | 20.0% |
| !! | TAGATGGTAATTTAAAAGAA+AGG | + | chr2.1:17884741-17884760 | None:intergenic | 20.0% |
| !! | TATGATGAAAAATAAACCAA+GGG | + | chr2.1:17884786-17884805 | None:intergenic | 20.0% |
| !! | TCATCACTCATTATTAAAAA+TGG | - | chr2.1:17881802-17881821 | MS.gene069827:intron | 20.0% |
| !! | TGATTGTATATGAATTCAAA+AGG | + | chr2.1:17884837-17884856 | None:intergenic | 20.0% |
| !! | TTAAATTTGACTAACCAAAA+TGG | - | chr2.1:17881012-17881031 | MS.gene069827:intron | 20.0% |
| !! | TTAATTGTGAATAAATCATC+AGG | - | chr2.1:17879840-17879859 | MS.gene069827:intron | 20.0% |
| !! | TTACTTAGAAACATTAGAAA+AGG | + | chr2.1:17884541-17884560 | None:intergenic | 20.0% |
| !!! | AATAGTTTAATTTTGTTCTC+AGG | - | chr2.1:17881779-17881798 | MS.gene069827:intron | 20.0% |
| !!! | ATAATATTTTAGATAAAGGG+GGG | - | chr2.1:17881369-17881388 | MS.gene069827:intron | 20.0% |
| !!! | ATTTATTTATTTTGTCAGGT+CGG | - | chr2.1:17885137-17885156 | MS.gene069827:intron | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCA+TGG | - | chr2.1:17880194-17880213 | MS.gene069827:intron | 20.0% |
| !!! | TCGACTACTTTATAATTTTA+TGG | - | chr2.1:17884269-17884288 | MS.gene069827:intron | 20.0% |
| !!! | TTTCTAATGTTTCTAAGTAA+TGG | - | chr2.1:17884541-17884560 | MS.gene069827:intron | 20.0% |
| !!! | TTTTCCCAAACATTATTAAT+TGG | - | chr2.1:17883380-17883399 | MS.gene069827:intron | 20.0% |
| ! | AAAACAAGTGAAAAGACAAT+GGG | - | chr2.1:17883155-17883174 | MS.gene069827:intron | 25.0% |
| ! | AAAATTCATTTACATCTCAC+AGG | - | chr2.1:17885186-17885205 | MS.gene069827:intron | 25.0% |
| ! | AAACATGACTAGTATTATAC+AGG | - | chr2.1:17883282-17883301 | MS.gene069827:intron | 25.0% |
| ! | AACATGACTAGTATTATACA+GGG | - | chr2.1:17883283-17883302 | MS.gene069827:intron | 25.0% |
| ! | AAGAAACAATCTCTTAAGTT+TGG | - | chr2.1:17884122-17884141 | MS.gene069827:intron | 25.0% |
| ! | AAGATGTTATGTGTATATGA+AGG | - | chr2.1:17881052-17881071 | MS.gene069827:intron | 25.0% |
| ! | AAGGTTAATTGGTTAAAAGA+AGG | + | chr2.1:17881511-17881530 | None:intergenic | 25.0% |
| ! | ACTAAACTAATCATTTAACC+AGG | + | chr2.1:17882189-17882208 | None:intergenic | 25.0% |
| ! | ACTTGAACAAAATAGTGAAA+TGG | + | chr2.1:17880562-17880581 | None:intergenic | 25.0% |
| ! | AGAAACAATCTCTTAAGTTT+GGG | - | chr2.1:17884123-17884142 | MS.gene069827:intron | 25.0% |
| ! | ATAACAGAACAATAAACAAG+TGG | - | chr2.1:17881724-17881743 | MS.gene069827:intron | 25.0% |
| ! | ATAGTGAAATGGAAAAGAAA+AGG | + | chr2.1:17880551-17880570 | None:intergenic | 25.0% |
| ! | CTAAACTAATCATTTAACCA+GGG | + | chr2.1:17882188-17882207 | None:intergenic | 25.0% |
| ! | CTACTTACATATTTAGTTGT+AGG | - | chr2.1:17883111-17883130 | MS.gene069827:intron | 25.0% |
| ! | CTATGATGAAAAATAAACCA+AGG | + | chr2.1:17884787-17884806 | None:intergenic | 25.0% |
| ! | GAAAAGAAGTTAGATATTAG+TGG | + | chr2.1:17883365-17883384 | None:intergenic | 25.0% |
| ! | GTGTATATGAAGGTTTAATA+AGG | - | chr2.1:17881062-17881081 | MS.gene069827:intron | 25.0% |
| ! | TAAACAACACTATATTGTTG+CGG | - | chr2.1:17881835-17881854 | MS.gene069827:intron | 25.0% |
| ! | TAACAGAACAATAAACAAGT+GGG | - | chr2.1:17881725-17881744 | MS.gene069827:intron | 25.0% |
| ! | TATCATCTATGTTGAACATT+AGG | + | chr2.1:17883536-17883555 | None:intergenic | 25.0% |
| ! | TATTGCATAAAATAGAGTCA+TGG | + | chr2.1:17881861-17881880 | None:intergenic | 25.0% |
| ! | TGTTAAATGTGGTGAAATTA+GGG | + | chr2.1:17879800-17879819 | None:intergenic | 25.0% |
| !! | AAACTTTTGACAACTTATCA+AGG | + | chr2.1:17882702-17882721 | None:intergenic | 25.0% |
| !! | ACTATTTTGTTCAAGTGTTT+AGG | - | chr2.1:17880566-17880585 | MS.gene069827:intron | 25.0% |
| !! | CTATTTTGTTCAAGTGTTTA+GGG | - | chr2.1:17880567-17880586 | MS.gene069827:intron | 25.0% |
| !! | GTTTGATTTACTAGCTAAAT+GGG | + | chr2.1:17885266-17885285 | None:intergenic | 25.0% |
| !! | TGTTTGTTAATATAAACCGA+AGG | + | chr2.1:17883267-17883286 | None:intergenic | 25.0% |
| !! | TTTTGGTACTTCTTTTTGAA+AGG | - | chr2.1:17882298-17882317 | MS.gene069827:intron | 25.0% |
| !!! | AAAACCTTAGCTATTTTTGT+AGG | + | chr2.1:17885025-17885044 | None:intergenic | 25.0% |
| !!! | ACAGATTTTGATTTATGAGA+TGG | + | chr2.1:17881677-17881696 | None:intergenic | 25.0% |
| !!! | ACTCTCGATTTTTAAAACAT+TGG | + | chr2.1:17883698-17883717 | None:intergenic | 25.0% |
| !!! | CAGATTTTGATTTATGAGAT+GGG | + | chr2.1:17881676-17881695 | None:intergenic | 25.0% |
| !!! | CTCTCGATTTTTAAAACATT+GGG | + | chr2.1:17883697-17883716 | None:intergenic | 25.0% |
| !!! | CTTACTTGTTATTTGATTTC+TGG | - | chr2.1:17881966-17881985 | MS.gene069827:intron | 25.0% |
| !!! | TAATATTTTAGATAAAGGGG+GGG | - | chr2.1:17881370-17881389 | MS.gene069827:intron | 25.0% |
| AAAAAAGAAGAGGTGATAGA+GGG | + | chr2.1:17882942-17882961 | None:intergenic | 30.0% | |
| AAAAGACAATGGGAAAACAA+AGG | - | chr2.1:17883165-17883184 | MS.gene069827:intron | 30.0% | |
| AAAATTGAACTGCTGTAGTT+TGG | - | chr2.1:17880508-17880527 | MS.gene069827:intron | 30.0% | |
| AAAGACAATGGGAAAACAAA+GGG | - | chr2.1:17883166-17883185 | MS.gene069827:intron | 30.0% | |
| AAATTCCATTAATCAGATGG+TGG | + | chr2.1:17880361-17880380 | None:intergenic | 30.0% | |
| AAATTGAACTGCTGTAGTTT+GGG | - | chr2.1:17880509-17880528 | MS.gene069827:intron | 30.0% | |
| AACCTAATGGAAATTAGCTA+AGG | - | chr2.1:17882744-17882763 | MS.gene069827:intron | 30.0% | |
| AACCTGAACCATATTTCAAT+AGG | - | chr2.1:17884238-17884257 | MS.gene069827:intron | 30.0% | |
| AAGAAAAGGCAACAAATTGA+TGG | + | chr2.1:17881949-17881968 | None:intergenic | 30.0% | |
| ACATGCACAAAAATCTCTTA+AGG | - | chr2.1:17884095-17884114 | MS.gene069827:intron | 30.0% | |
| ACCTAATGGAAATTAGCTAA+GGG | - | chr2.1:17882745-17882764 | MS.gene069827:intron | 30.0% | |
| ATCATATCACAGATTCTGAT+AGG | - | chr2.1:17883759-17883778 | MS.gene069827:intron | 30.0% | |
| ATCCTATTGAAATATGGTTC+AGG | + | chr2.1:17884243-17884262 | None:intergenic | 30.0% | |
| ATGAATTCAAAAGGAGTAGA+TGG | + | chr2.1:17884828-17884847 | None:intergenic | 30.0% | |
| ATTCCACTATTTACAGAGAT+TGG | - | chr2.1:17883211-17883230 | MS.gene069827:intron | 30.0% | |
| ATTCCATAAGCTCTTTCAAA+CGG | - | chr2.1:17880285-17880304 | MS.gene069827:intron | 30.0% | |
| CAAAGAAAAAGGAACTCAAA+AGG | - | chr2.1:17880821-17880840 | MS.gene069827:intron | 30.0% | |
| CAACTTATCAAGGCAAAATA+AGG | + | chr2.1:17882692-17882711 | None:intergenic | 30.0% | |
| CACTAAGATATTCATTTGTC+TGG | - | chr2.1:17880938-17880957 | MS.gene069827:intron | 30.0% | |
| CAGACATGATATTCAGATAT+TGG | - | chr2.1:17881171-17881190 | MS.gene069827:intron | 30.0% | |
| CTGATTATATTAAGCGACAA+GGG | - | chr2.1:17885227-17885246 | MS.gene069827:intron | 30.0% | |
| CTTTCTTATGGTCTATTGAT+CGG | - | chr2.1:17882450-17882469 | MS.gene069827:CDS | 30.0% | |
| GAAAACAAGTGAAAAGACAA+TGG | - | chr2.1:17883154-17883173 | MS.gene069827:intron | 30.0% | |
| GAAATATATACACTTTCCCT+TGG | - | chr2.1:17884767-17884786 | MS.gene069827:intron | 30.0% | |
| GACATCATCCTATTGAAATA+TGG | + | chr2.1:17884249-17884268 | None:intergenic | 30.0% | |
| GCATATTAGCAAATATACCT+AGG | + | chr2.1:17884037-17884056 | None:intergenic | 30.0% | |
| GTGTTAAATGTGGTGAAATT+AGG | + | chr2.1:17879801-17879820 | None:intergenic | 30.0% | |
| GTTTCCTACAAAAATAGCTA+AGG | - | chr2.1:17885018-17885037 | MS.gene069827:intron | 30.0% | |
| TAAAAAAGAAGAGGTGATAG+AGG | + | chr2.1:17882943-17882962 | None:intergenic | 30.0% | |
| TAAAAACATTCAATGTCCTC+AGG | + | chr2.1:17883446-17883465 | None:intergenic | 30.0% | |
| TAAAAGAAAGGATACACGAA+AGG | + | chr2.1:17884729-17884748 | None:intergenic | 30.0% | |
| TAAACTATTGATGTCCTCAT+AGG | + | chr2.1:17881768-17881787 | None:intergenic | 30.0% | |
| TAACCAATCTCTGTAAATAG+TGG | + | chr2.1:17883217-17883236 | None:intergenic | 30.0% | |
| TCATATCACAGATTCTGATA+GGG | - | chr2.1:17883760-17883779 | MS.gene069827:intron | 30.0% | |
| TCTCGGATTACTAAACAATA+GGG | + | chr2.1:17881884-17881903 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACGTTA+TGG | - | chr2.1:17884435-17884454 | MS.gene069827:intron | 30.0% | |
| TGTTAGCAGAGAAATTCTAT+AGG | + | chr2.1:17881248-17881267 | None:intergenic | 30.0% | |
| TTAAACTAGTACTGCTTTGT+GGG | - | chr2.1:17880669-17880688 | MS.gene069827:intron | 30.0% | |
| TTCATTCTAGTGAAGATCTT+TGG | + | chr2.1:17881653-17881672 | None:intergenic | 30.0% | |
| ! | AACTACTTGCCATTGTTATT+TGG | - | chr2.1:17880616-17880635 | MS.gene069827:intron | 30.0% |
| ! | AGATTGGTCAATTCAGAAAA+AGG | + | chr2.1:17882916-17882935 | None:intergenic | 30.0% |
| ! | AGTTGATATTCATAGAGATG+AGG | - | chr2.1:17883812-17883831 | MS.gene069827:intron | 30.0% |
| ! | CTAAGTGGTTGATTAGATTT+TGG | - | chr2.1:17882281-17882300 | MS.gene069827:intron | 30.0% |
| ! | GGTTTGATTTACTAGCTAAA+TGG | + | chr2.1:17885267-17885286 | None:intergenic | 30.0% |
| ! | GTGTAGTTTTCTTCTTGAAA+GGG | - | chr2.1:17880473-17880492 | MS.gene069827:intron | 30.0% |
| ! | GTTAAAAGAAGGTCATGTTT+TGG | + | chr2.1:17881500-17881519 | None:intergenic | 30.0% |
| ! | TAATTGTCCGATACAGTTTT+GGG | + | chr2.1:17881224-17881243 | None:intergenic | 30.0% |
| ! | TCGAGTTTTTGTGTTAAATG+TGG | + | chr2.1:17879811-17879830 | None:intergenic | 30.0% |
| ! | TGTGTAGTTTTCTTCTTGAA+AGG | - | chr2.1:17880472-17880491 | MS.gene069827:intron | 30.0% |
| ! | TTAAAGTTTGGGATTACGTA+AGG | - | chr2.1:17884196-17884215 | MS.gene069827:CDS | 30.0% |
| ! | TTAATTGTCCGATACAGTTT+TGG | + | chr2.1:17881225-17881244 | None:intergenic | 30.0% |
| ! | TTCCTTTTTCTTTGATGCTT+TGG | + | chr2.1:17880815-17880834 | None:intergenic | 30.0% |
| !! | AATATTTTAGATAAAGGGGG+GGG | - | chr2.1:17881371-17881390 | MS.gene069827:intron | 30.0% |
| !! | ACATTTTGTAATGGAAGCTA+GGG | - | chr2.1:17883506-17883525 | MS.gene069827:intron | 30.0% |
| !! | ATCTCGTAGACAAGTTTTAT+CGG | - | chr2.1:17883566-17883585 | MS.gene069827:intron | 30.0% |
| !! | GGTTTTATAGGTGTATCAAA+TGG | - | chr2.1:17885068-17885087 | MS.gene069827:CDS | 30.0% |
| !! | TACATTTTGTAATGGAAGCT+AGG | - | chr2.1:17883505-17883524 | MS.gene069827:intron | 30.0% |
| !! | TGATGGTGTTTTATGATTGA+TGG | - | chr2.1:17880028-17880047 | MS.gene069827:intron | 30.0% |
| !!! | ATGGAAGTTTTTTCTCACTT+TGG | - | chr2.1:17885087-17885106 | MS.gene069827:CDS | 30.0% |
| !!! | GAATTTTCAGTTGATGATGA+AGG | - | chr2.1:17882565-17882584 | MS.gene069827:intron | 30.0% |
| !!! | TGAAATTAGGGTTTTGGATT+GGG | + | chr2.1:17879788-17879807 | None:intergenic | 30.0% |
| !!! | TGGAAGTTTTTTCTCACTTT+GGG | - | chr2.1:17885088-17885107 | MS.gene069827:CDS | 30.0% |
| AACAAAGGGTGATGTAATAG+AGG | - | chr2.1:17883180-17883199 | MS.gene069827:intron | 35.0% | |
| AACAACCAGTTAAAACCTGA+AGG | - | chr2.1:17881264-17881283 | MS.gene069827:intron | 35.0% | |
| AACAGAGAGCCAAATAACAA+TGG | + | chr2.1:17880628-17880647 | None:intergenic | 35.0% | |
| AAGACCGTTATTCAGAAATG+CGG | - | chr2.1:17882345-17882364 | MS.gene069827:intron | 35.0% | |
| AATTGAACTGCTGTAGTTTG+GGG | - | chr2.1:17880510-17880529 | MS.gene069827:intron | 35.0% | |
| ACATCATCCCAAAACTGTAT+CGG | - | chr2.1:17881214-17881233 | MS.gene069827:intron | 35.0% | |
| ACATGGCATCTAATCTAACA+TGG | + | chr2.1:17884865-17884884 | None:intergenic | 35.0% | |
| ACCCTATTGTTGCAAGTTAT+GGG | - | chr2.1:17884964-17884983 | MS.gene069827:intron | 35.0% | |
| ACCCTTAGCTAATTTCCATT+AGG | + | chr2.1:17882749-17882768 | None:intergenic | 35.0% | |
| AGAATTTAAATTGCGCACAC+AGG | - | chr2.1:17882872-17882891 | MS.gene069827:intron | 35.0% | |
| ATAATGAGGCTATCATAGGA+AGG | - | chr2.1:17884403-17884422 | MS.gene069827:intron | 35.0% | |
| ATCATTATGCTCTTAGACAC+AGG | + | chr2.1:17880992-17881011 | None:intergenic | 35.0% | |
| ATGACACTCTCAAGGTTAAT+TGG | + | chr2.1:17881522-17881541 | None:intergenic | 35.0% | |
| ATGACACTGTAAACTTATGC+AGG | - | chr2.1:17884660-17884679 | MS.gene069827:intron | 35.0% | |
| ATGCATAATGAGGCTATCAT+AGG | - | chr2.1:17884399-17884418 | MS.gene069827:intron | 35.0% | |
| ATTATATTAAGCGACAAGGG+AGG | - | chr2.1:17885230-17885249 | MS.gene069827:intron | 35.0% | |
| CACATGATAGGATTACTTTG+AGG | - | chr2.1:17881139-17881158 | MS.gene069827:intron | 35.0% | |
| CTTTGTGGGAATAATGTTCA+TGG | - | chr2.1:17880683-17880702 | MS.gene069827:intron | 35.0% | |
| GAAGTTAGATATTAGTGGGA+TGG | + | chr2.1:17883360-17883379 | None:intergenic | 35.0% | |
| GATTCAGTTAAACTAAGCCT+AGG | - | chr2.1:17884017-17884036 | MS.gene069827:intron | 35.0% | |
| GCTGATTATATTAAGCGACA+AGG | - | chr2.1:17885226-17885245 | MS.gene069827:intron | 35.0% | |
| GGTTATAATTGTAACCGTGT+GGG | - | chr2.1:17882766-17882785 | MS.gene069827:intron | 35.0% | |
| GTCTCGGATTACTAAACAAT+AGG | + | chr2.1:17881885-17881904 | None:intergenic | 35.0% | |
| GTTAAACTAGTACTGCTTTG+TGG | - | chr2.1:17880668-17880687 | MS.gene069827:intron | 35.0% | |
| TACCCTATTGTTGCAAGTTA+TGG | - | chr2.1:17884963-17884982 | MS.gene069827:intron | 35.0% | |
| TCAAAAGGAGTAGATGGTAA+TGG | + | chr2.1:17884822-17884841 | None:intergenic | 35.0% | |
| TCTTATACTCCATAAGCCAT+CGG | - | chr2.1:17883308-17883327 | MS.gene069827:intron | 35.0% | |
| TCTTGTGATTCTCAATTGCA+TGG | - | chr2.1:17883869-17883888 | MS.gene069827:intron | 35.0% | |
| TGGAGATAGAGAAGAGAAAA+GGG | + | chr2.1:17881480-17881499 | None:intergenic | 35.0% | |
| TGTTCTTGAAACTGACTGAT+CGG | - | chr2.1:17884513-17884532 | MS.gene069827:intron | 35.0% | |
| TTAGAGTTTGACAAGTGGAA+AGG | - | chr2.1:17882541-17882560 | MS.gene069827:intron | 35.0% | |
| TTATATTAAGCGACAAGGGA+GGG | - | chr2.1:17885231-17885250 | MS.gene069827:intron | 35.0% | |
| TTGGAGATAGAGAAGAGAAA+AGG | + | chr2.1:17881481-17881500 | None:intergenic | 35.0% | |
| TTGTGTTTGGTATTGCATGA+TGG | - | chr2.1:17880011-17880030 | MS.gene069827:intron | 35.0% | |
| TTTCTTCTTGAAAGGGTTGA+CGG | - | chr2.1:17880480-17880499 | MS.gene069827:intron | 35.0% | |
| ! | AAGTAATGGAGCCCTATTTA+CGG | - | chr2.1:17884555-17884574 | MS.gene069827:intron | 35.0% |
| ! | ATGTGGTGAAATTAGGGTTT+TGG | + | chr2.1:17879794-17879813 | None:intergenic | 35.0% |
| ! | GTATACTTTTGAACAGAGTC+TGG | - | chr2.1:17880748-17880767 | MS.gene069827:intron | 35.0% |
| ! | GTTGTTGATTGAAGTCTAAG+TGG | - | chr2.1:17882266-17882285 | MS.gene069827:intron | 35.0% |
| ! | TCATAGGAAGGATTAGCATA+TGG | - | chr2.1:17884415-17884434 | MS.gene069827:intron | 35.0% |
| ! | TGTTTGTTGCTGTTAGTTTG+TGG | - | chr2.1:17882999-17883018 | MS.gene069827:intron | 35.0% |
| ! | TTAGGGTGGATTTCATAATG+TGG | - | chr2.1:17880584-17880603 | MS.gene069827:intron | 35.0% |
| ! | TTTCGAGAAACTCTCCATTT+TGG | + | chr2.1:17881029-17881048 | None:intergenic | 35.0% |
| ! | TTTTATGGCGTTAACATGAC+TGG | - | chr2.1:17884284-17884303 | MS.gene069827:intron | 35.0% |
| ! | TTTTGTACACAACAGAGCAA+AGG | - | chr2.1:17881696-17881715 | MS.gene069827:intron | 35.0% |
| ! | TTTTGTTCAAGTGTTTAGGG+TGG | - | chr2.1:17880570-17880589 | MS.gene069827:intron | 35.0% |
| !! | AGCATGTACGTAGGTTTTAT+AGG | - | chr2.1:17885056-17885075 | MS.gene069827:CDS | 35.0% |
| !! | GTTTCGACTGGGTTTTATAT+TGG | - | chr2.1:17884325-17884344 | MS.gene069827:intron | 35.0% |
| !! | GTTTGTTGCTGTTAGTTTGT+GGG | - | chr2.1:17883000-17883019 | MS.gene069827:intron | 35.0% |
| !! | TCTCAGGATTAGCTTTCTTA+TGG | - | chr2.1:17882438-17882457 | MS.gene069827:CDS | 35.0% |
| !! | TCTCGTAGACAAGTTTTATC+GGG | - | chr2.1:17883567-17883586 | MS.gene069827:intron | 35.0% |
| !! | TTGGCTCTAAATCAATGAAC+TGG | + | chr2.1:17885288-17885307 | None:intergenic | 35.0% |
| !!! | GCTCTCTGTTTTTTGTTATG+CGG | - | chr2.1:17880638-17880657 | MS.gene069827:intron | 35.0% |
| !!! | GTAGGAATTTTTAGCAGTGT+TGG | - | chr2.1:17883129-17883148 | MS.gene069827:intron | 35.0% |
| !!! | GTGAAATTAGGGTTTTGGAT+TGG | + | chr2.1:17879789-17879808 | None:intergenic | 35.0% |
| AAATGAACCAGTTTGCAACG+TGG | + | chr2.1:17880887-17880906 | None:intergenic | 40.0% | |
| AACATCAAACCGTTCCAAAC+AGG | + | chr2.1:17881323-17881342 | None:intergenic | 40.0% | |
| AAGGCAAAATAAGGAGAGCA+AGG | + | chr2.1:17882683-17882702 | None:intergenic | 40.0% | |
| AAGGGAAAAACAGAGATGCT+TGG | - | chr2.1:17883591-17883610 | MS.gene069827:intron | 40.0% | |
| AATAAACCTTGTTGCGTTGC+AGG | + | chr2.1:17879958-17879977 | None:intergenic | 40.0% | |
| AATACGGACATTCACCTGTT+TGG | - | chr2.1:17881306-17881325 | MS.gene069827:intron | 40.0% | |
| ACATTCAATGTCCTCAGGAT+AGG | + | chr2.1:17883441-17883460 | None:intergenic | 40.0% | |
| ACCTCCGCATTTCTGAATAA+CGG | + | chr2.1:17882352-17882371 | None:intergenic | 40.0% | |
| AGACCGTTTGAAAGAGCTTA+TGG | + | chr2.1:17880291-17880310 | None:intergenic | 40.0% | |
| AGAGAAAAGGGTCTCAATCT+CGG | + | chr2.1:17881468-17881487 | None:intergenic | 40.0% | |
| AGCACCAACAAACCGTAAAT+AGG | + | chr2.1:17884570-17884589 | None:intergenic | 40.0% | |
| AGGTGATAGAGGGAATAGAT+TGG | + | chr2.1:17882932-17882951 | None:intergenic | 40.0% | |
| AGTAGAAAATCCACCAAGGA+GGG | + | chr2.1:17881550-17881569 | None:intergenic | 40.0% | |
| ATAGCCTCATTATGCATAGC+CGG | + | chr2.1:17884396-17884415 | None:intergenic | 40.0% | |
| ATTGAACTGCTGTAGTTTGG+GGG | - | chr2.1:17880511-17880530 | MS.gene069827:intron | 40.0% | |
| CAAACTGTCATGCACATGAT+AGG | - | chr2.1:17881127-17881146 | MS.gene069827:intron | 40.0% | |
| CAAATCATTGTGCAGAGTCT+CGG | + | chr2.1:17881901-17881920 | None:intergenic | 40.0% | |
| CACTAATTCCACTCTACCTA+TGG | - | chr2.1:17879695-17879714 | MS.gene069827:CDS | 40.0% | |
| CAGTTAAAACCTGAAGGAAC+CGG | - | chr2.1:17881270-17881289 | MS.gene069827:intron | 40.0% | |
| CAGTTATAAAACCTCCCACA+CGG | + | chr2.1:17882783-17882802 | None:intergenic | 40.0% | |
| CATGTCATAGAGTTTCGACT+GGG | - | chr2.1:17884314-17884333 | MS.gene069827:intron | 40.0% | |
| CTTTGGCAAACAAACAGCTT+TGG | + | chr2.1:17881636-17881655 | None:intergenic | 40.0% | |
| GAACAGTAGAAAATCCACCA+AGG | + | chr2.1:17881554-17881573 | None:intergenic | 40.0% | |
| GCAAACCTGATGAGATTCTT+CGG | + | chr2.1:17879761-17879780 | None:intergenic | 40.0% | |
| GCACCAACAAACCGTAAATA+GGG | + | chr2.1:17884569-17884588 | None:intergenic | 40.0% | |
| GGGTAGGAGAGATAATACAA+AGG | - | chr2.1:17881413-17881432 | MS.gene069827:intron | 40.0% | |
| GGGTTATAATTGTAACCGTG+TGG | - | chr2.1:17882765-17882784 | MS.gene069827:intron | 40.0% | |
| GTGAATAAATCATCAGGCTC+CGG | - | chr2.1:17879846-17879865 | MS.gene069827:intron | 40.0% | |
| TATAATTGTAACCGTGTGGG+AGG | - | chr2.1:17882769-17882788 | MS.gene069827:intron | 40.0% | |
| TATCAATCGCATCACATCTC+TGG | - | chr2.1:17884687-17884706 | MS.gene069827:intron | 40.0% | |
| TCAACACACGTTCACGTTAA+AGG | - | chr2.1:17880421-17880440 | MS.gene069827:intron | 40.0% | |
| TCAACTTATACGAGCTCTCA+AGG | + | chr2.1:17880266-17880285 | None:intergenic | 40.0% | |
| TCACACGATGAGTTATCCTT+CGG | - | chr2.1:17883248-17883267 | MS.gene069827:intron | 40.0% | |
| TCCTCAGCATAATGAGTCTT+TGG | + | chr2.1:17885307-17885326 | None:intergenic | 40.0% | |
| TCTGCAGCAAGATCTTCTAA+GGG | + | chr2.1:17882855-17882874 | None:intergenic | 40.0% | |
| TGAGGACATTAGTAACATGG+AGG | - | chr2.1:17885321-17885340 | MS.gene069827:CDS | 40.0% | |
| TGCTGAGGACATTAGTAACA+TGG | - | chr2.1:17885318-17885337 | MS.gene069827:CDS | 40.0% | |
| TTCTGCAGCAAGATCTTCTA+AGG | + | chr2.1:17882856-17882875 | None:intergenic | 40.0% | |
| ! | AGCCCATAACTTGCAACAAT+AGG | + | chr2.1:17884969-17884988 | None:intergenic | 40.0% |
| ! | ATCACATCTCTGGAAAGCAT+GGG | - | chr2.1:17884697-17884716 | MS.gene069827:intron | 40.0% |
| ! | GCCCATAACTTGCAACAATA+GGG | + | chr2.1:17884968-17884987 | None:intergenic | 40.0% |
| ! | GGAAAAGCACACGTTCATAT+AGG | - | chr2.1:17882471-17882490 | MS.gene069827:CDS | 40.0% |
| ! | GGCCAAAGCATCAAAGAAAA+AGG | - | chr2.1:17880810-17880829 | MS.gene069827:intron | 40.0% |
| ! | TCTTGAACTAGTGTTTTCCC+TGG | - | chr2.1:17882168-17882187 | MS.gene069827:intron | 40.0% |
| ! | TGATGAAGGTACACTTGAAG+AGG | - | chr2.1:17882579-17882598 | MS.gene069827:intron | 40.0% |
| ! | TTCCATTAATCAGATGGTGG+TGG | + | chr2.1:17880358-17880377 | None:intergenic | 40.0% |
| !! | AGACAAGTTTTATCGGGGAA+GGG | - | chr2.1:17883573-17883592 | MS.gene069827:intron | 40.0% |
| !! | ATGCCTGCTTGTTATTCGAT+GGG | - | chr2.1:17882227-17882246 | MS.gene069827:intron | 40.0% |
| !! | CTCGTAGACAAGTTTTATCG+GGG | - | chr2.1:17883568-17883587 | MS.gene069827:intron | 40.0% |
| !! | TAGACAAGTTTTATCGGGGA+AGG | - | chr2.1:17883572-17883591 | MS.gene069827:intron | 40.0% |
| !! | TATGCCTGCTTGTTATTCGA+TGG | - | chr2.1:17882226-17882245 | MS.gene069827:intron | 40.0% |
| !! | TATTTTGTCAGGTCGGCTTT+CGG | - | chr2.1:17885144-17885163 | MS.gene069827:intron | 40.0% |
| AACCTGATGAGATTCTTCGG+AGG | + | chr2.1:17879758-17879777 | None:intergenic | 45.0% | |
| AAGCCAAAGCTCAAAAGGCT+AGG | - | chr2.1:17882500-17882519 | MS.gene069827:intron | 45.0% | |
| ACCGTTATTCAGAAATGCGG+AGG | - | chr2.1:17882348-17882367 | MS.gene069827:intron | 45.0% | |
| ACCTACGTACATGCTAGAGT+AGG | + | chr2.1:17885051-17885070 | None:intergenic | 45.0% | |
| ACTAAGTGGGGTCTGCTATA+TGG | + | chr2.1:17884472-17884491 | None:intergenic | 45.0% | |
| AGAAAGATCAGCCTATCCTG+AGG | - | chr2.1:17883427-17883446 | MS.gene069827:intron | 45.0% | |
| AGAGGAAGCCAAAGCTCAAA+AGG | - | chr2.1:17882495-17882514 | MS.gene069827:CDS | 45.0% | |
| AGATGCCATGTCATTCGCTA+GGG | - | chr2.1:17884874-17884893 | MS.gene069827:intron | 45.0% | |
| AGCCAAAGCTCAAAAGGCTA+GGG | - | chr2.1:17882501-17882520 | MS.gene069827:intron | 45.0% | |
| AGGAACTCAAAAGGCAAGAG+AGG | - | chr2.1:17880830-17880849 | MS.gene069827:intron | 45.0% | |
| AGTCTACACAAGATCAGAGG+TGG | - | chr2.1:17883715-17883734 | MS.gene069827:intron | 45.0% | |
| AGTGTCATCAAAACCCTCCT+TGG | - | chr2.1:17881534-17881553 | MS.gene069827:intron | 45.0% | |
| ATATAGCAGACCCCACTTAG+TGG | - | chr2.1:17884471-17884490 | MS.gene069827:intron | 45.0% | |
| ATGAGGATTGAGAATCGCGA+TGG | + | chr2.1:17879726-17879745 | None:intergenic | 45.0% | |
| ATGGCAGTGAGTGATCTAAG+TGG | + | chr2.1:17883334-17883353 | None:intergenic | 45.0% | |
| CACCACCACCATCTGATTAA+TGG | - | chr2.1:17880353-17880372 | MS.gene069827:intron | 45.0% | |
| CAGCAAGTAGTTAGACAGCT+TGG | + | chr2.1:17883987-17884006 | None:intergenic | 45.0% | |
| CAGTAGAAAATCCACCAAGG+AGG | + | chr2.1:17881551-17881570 | None:intergenic | 45.0% | |
| CATTAGGTTTCGATGCCCTA+TGG | + | chr2.1:17882733-17882752 | None:intergenic | 45.0% | |
| CCAGTCGAAACTCTATGACA+TGG | + | chr2.1:17884316-17884335 | None:intergenic | 45.0% | |
| CCATGTCATAGAGTTTCGAC+TGG | - | chr2.1:17884313-17884332 | MS.gene069827:intron | 45.0% | |
| CCTGAGACTAAACCAGAACA+AGG | + | chr2.1:17882425-17882444 | None:intergenic | 45.0% | |
| CGGTCATGAGCTGGTAAATA+CGG | - | chr2.1:17881290-17881309 | MS.gene069827:intron | 45.0% | |
| CGTATTTACCAGCTCATGAC+CGG | + | chr2.1:17881292-17881311 | None:intergenic | 45.0% | |
| CTGCGTTAGAGTTTGACAAG+TGG | - | chr2.1:17882536-17882555 | MS.gene069827:intron | 45.0% | |
| CTTAGATCACTCACTGCCAT+CGG | - | chr2.1:17883334-17883353 | MS.gene069827:intron | 45.0% | |
| GAAAGTGACAATGAAGCTGC+TGG | - | chr2.1:17880775-17880794 | MS.gene069827:intron | 45.0% | |
| GAGAGTCTACACAAGATCAG+AGG | - | chr2.1:17883712-17883731 | MS.gene069827:intron | 45.0% | |
| GAGCCCTATTTACGGTTTGT+TGG | - | chr2.1:17884563-17884582 | MS.gene069827:intron | 45.0% | |
| GCACACGTTCATATAGGAAG+AGG | - | chr2.1:17882477-17882496 | MS.gene069827:CDS | 45.0% | |
| GCCAAAGACTCATTATGCTG+AGG | - | chr2.1:17885303-17885322 | MS.gene069827:CDS | 45.0% | |
| GGAACTCAAAAGGCAAGAGA+GGG | - | chr2.1:17880831-17880850 | MS.gene069827:intron | 45.0% | |
| GGACATTCACCTGTTTGGAA+CGG | - | chr2.1:17881311-17881330 | MS.gene069827:intron | 45.0% | |
| GTGAGTCAACATCCTTGTTC+TGG | - | chr2.1:17882410-17882429 | MS.gene069827:CDS | 45.0% | |
| TAAAAGGGGAGGGTTGTGTT+AGG | + | chr2.1:17884361-17884380 | None:intergenic | 45.0% | |
| TAGATGCCATGTCATTCGCT+AGG | - | chr2.1:17884873-17884892 | MS.gene069827:intron | 45.0% | |
| TATAGCAGACCCCACTTAGT+GGG | - | chr2.1:17884472-17884491 | MS.gene069827:intron | 45.0% | |
| TTCAGAAATGCGGAGGTTGA+AGG | - | chr2.1:17882355-17882374 | MS.gene069827:intron | 45.0% | |
| TTCCTCCGAAGAATCTCATC+AGG | - | chr2.1:17879753-17879772 | MS.gene069827:CDS | 45.0% | |
| TTCGGAGGAAGATGAAGATG+AGG | + | chr2.1:17879743-17879762 | None:intergenic | 45.0% | |
| TTCTCACTTTGGGCTGTCTA+GGG | - | chr2.1:17885098-17885117 | MS.gene069827:CDS | 45.0% | |
| TTGTGGGAGAAACAGTGTCA+CGG | - | chr2.1:17883016-17883035 | MS.gene069827:intron | 45.0% | |
| TTTCTCACTTTGGGCTGTCT+AGG | - | chr2.1:17885097-17885116 | MS.gene069827:CDS | 45.0% | |
| TTTGAAAGGCCGAAGAAGCT+CGG | - | chr2.1:17882312-17882331 | MS.gene069827:intron | 45.0% | |
| ! | ACACAACCCTCCCCTTTTAT+TGG | - | chr2.1:17884362-17884381 | MS.gene069827:intron | 45.0% |
| ! | CACAACCCTCCCCTTTTATT+GGG | - | chr2.1:17884363-17884382 | MS.gene069827:intron | 45.0% |
| ! | CATCACATCTCTGGAAAGCA+TGG | - | chr2.1:17884696-17884715 | MS.gene069827:intron | 45.0% |
| ! | CTGCAATGAGAAGTGTAGAG+AGG | + | chr2.1:17879675-17879694 | None:intergenic | 45.0% |
| ! | TTCGGGTGTCATGGATGATA+GGG | - | chr2.1:17885162-17885181 | MS.gene069827:intron | 45.0% |
| ! | TTGTTATTCGATGGGGGAGA+GGG | - | chr2.1:17882235-17882254 | MS.gene069827:intron | 45.0% |
| ! | TTTCGGGTGTCATGGATGAT+AGG | - | chr2.1:17885161-17885180 | MS.gene069827:intron | 45.0% |
| !! | ATTTTGTCAGGTCGGCTTTC+GGG | - | chr2.1:17885145-17885164 | MS.gene069827:intron | 45.0% |
| !! | CATAGGGCATCGAAACCTAA+TGG | - | chr2.1:17882731-17882750 | MS.gene069827:intron | 45.0% |
| !! | CATTAATCAGATGGTGGTGG+TGG | + | chr2.1:17880355-17880374 | None:intergenic | 45.0% |
| !! | CCTTGTTCTGGTTTAGTCTC+AGG | - | chr2.1:17882422-17882441 | MS.gene069827:CDS | 45.0% |
| !! | CGGTTCCTTCAGGTTTTAAC+TGG | + | chr2.1:17881272-17881291 | None:intergenic | 45.0% |
| !! | GGGTTTTGATGACACTCTCA+AGG | + | chr2.1:17881530-17881549 | None:intergenic | 45.0% |
| !! | TGCCTGCTTGTTATTCGATG+GGG | - | chr2.1:17882228-17882247 | MS.gene069827:intron | 45.0% |
| !! | TTCCCTAGCCTTTTGAGCTT+TGG | + | chr2.1:17882506-17882525 | None:intergenic | 45.0% |
| !! | AACAATTAAATAATATTTAA+TGG | + | chr2.1:17882109-17882128 | None:intergenic | 5.0% |
| AAACCTTGTTGCGTTGCAGG+CGG | + | chr2.1:17879955-17879974 | None:intergenic | 50.0% | |
| AAGCGAGTGCAAGTCCTATG+AGG | - | chr2.1:17881751-17881770 | MS.gene069827:intron | 50.0% | |
| AAGGTTTCTGCTGGCACTCA+TGG | + | chr2.1:17881587-17881606 | None:intergenic | 50.0% | |
| AATCGCGATGGCGTTTCCAT+AGG | + | chr2.1:17879714-17879733 | None:intergenic | 50.0% | |
| AGCTCAAAAGGCTAGGGAAG+AGG | - | chr2.1:17882507-17882526 | MS.gene069827:intron | 50.0% | |
| AGGTACACTTGAAGAGGAGC+AGG | - | chr2.1:17882585-17882604 | MS.gene069827:intron | 50.0% | |
| CCAAGCCCAATAAAAGGGGA+GGG | + | chr2.1:17884371-17884390 | None:intergenic | 50.0% | |
| CCAGTTTGCAACGTGGAATG+AGG | + | chr2.1:17880880-17880899 | None:intergenic | 50.0% | |
| CCTCATTCCACGTTGCAAAC+TGG | - | chr2.1:17880877-17880896 | MS.gene069827:intron | 50.0% | |
| CGGTCCCAAGCCCAATAAAA+GGG | + | chr2.1:17884376-17884395 | None:intergenic | 50.0% | |
| CTTTGACTGCCGAGCTTCTT+CGG | + | chr2.1:17882324-17882343 | None:intergenic | 50.0% | |
| GAGCAGAAGAAGGTTTCTGC+TGG | + | chr2.1:17881596-17881615 | None:intergenic | 50.0% | |
| GATATTAGTGGGATGGCCGA+TGG | + | chr2.1:17883353-17883372 | None:intergenic | 50.0% | |
| GCAAAGGAGGAGGAAGAATG+GGG | - | chr2.1:17881393-17881412 | MS.gene069827:intron | 50.0% | |
| GCCTACTCTAGCATGTACGT+AGG | - | chr2.1:17885047-17885066 | MS.gene069827:CDS | 50.0% | |
| GGCAAAGGAGGAGGAAGAAT+GGG | - | chr2.1:17881392-17881411 | MS.gene069827:intron | 50.0% | |
| GGTCCCAAGCCCAATAAAAG+GGG | + | chr2.1:17884375-17884394 | None:intergenic | 50.0% | |
| GTCATCAAAACCCTCCTTGG+TGG | - | chr2.1:17881537-17881556 | MS.gene069827:intron | 50.0% | |
| TCAAGCCCTAGCGAATGACA+TGG | + | chr2.1:17884882-17884901 | None:intergenic | 50.0% | |
| TCCCCCATCGAATAACAAGC+AGG | + | chr2.1:17882233-17882252 | None:intergenic | 50.0% | |
| TCTAAGTGGCCGATGGCTTA+TGG | + | chr2.1:17883320-17883339 | None:intergenic | 50.0% | |
| TCTCACTTTGGGCTGTCTAG+GGG | - | chr2.1:17885099-17885118 | MS.gene069827:CDS | 50.0% | |
| TGAGTGATCTAAGTGGCCGA+TGG | + | chr2.1:17883327-17883346 | None:intergenic | 50.0% | |
| TGGCGTTTCCATAGGTAGAG+TGG | + | chr2.1:17879706-17879725 | None:intergenic | 50.0% | |
| TGTGGGAGAAACAGTGTCAC+GGG | - | chr2.1:17883017-17883036 | MS.gene069827:intron | 50.0% | |
| TGTTATTCGATGGGGGAGAG+GGG | - | chr2.1:17882236-17882255 | MS.gene069827:intron | 50.0% | |
| TTAGATAAAGGGGGGGGCAA+AGG | - | chr2.1:17881377-17881396 | MS.gene069827:intron | 50.0% | |
| ! | AAGCCTTGTCCCACTAAGTG+GGG | + | chr2.1:17884484-17884503 | None:intergenic | 50.0% |
| ! | CAAGCCTTGTCCCACTAAGT+GGG | + | chr2.1:17884485-17884504 | None:intergenic | 50.0% |
| ! | CCTCCCCTTTTATTGGGCTT+GGG | - | chr2.1:17884369-17884388 | MS.gene069827:intron | 50.0% |
| ! | CCTTTTATTGGGCTTGGGAC+CGG | - | chr2.1:17884374-17884393 | MS.gene069827:intron | 50.0% |
| ! | GTTGAAGGATGAAGAGCGTG+AGG | - | chr2.1:17882370-17882389 | MS.gene069827:CDS | 50.0% |
| ! | TCGGGTGTCATGGATGATAG+GGG | - | chr2.1:17885163-17885182 | MS.gene069827:intron | 50.0% |
| !! | CTTGTTATTCGATGGGGGAG+AGG | - | chr2.1:17882234-17882253 | MS.gene069827:intron | 50.0% |
| !! | GCCTGCTTGTTATTCGATGG+GGG | - | chr2.1:17882229-17882248 | MS.gene069827:intron | 50.0% |
| AGACCCCACTTAGTGGGACA+AGG | - | chr2.1:17884478-17884497 | MS.gene069827:intron | 55.0% | |
| AGGAGGAGGAAGAATGGGGT+AGG | - | chr2.1:17881397-17881416 | MS.gene069827:intron | 55.0% | |
| CCACTTAGTGGGACAAGGCT+TGG | - | chr2.1:17884483-17884502 | MS.gene069827:intron | 55.0% | |
| CCCAAGCCCAATAAAAGGGG+AGG | + | chr2.1:17884372-17884391 | None:intergenic | 55.0% | |
| CCGGTCCCAAGCCCAATAAA+AGG | + | chr2.1:17884377-17884396 | None:intergenic | 55.0% | |
| CGTGCAGCAGGTTCTCTAAC+CGG | + | chr2.1:17879868-17879887 | None:intergenic | 55.0% | |
| GCTCGAGAGTGAGCAGAAGA+AGG | + | chr2.1:17881606-17881625 | None:intergenic | 55.0% | |
| GGGACCGGCTATGCATAATG+AGG | - | chr2.1:17884389-17884408 | MS.gene069827:intron | 55.0% | |
| GGGCAAAGGAGGAGGAAGAA+TGG | - | chr2.1:17881391-17881410 | MS.gene069827:intron | 55.0% | |
| GTTATTCGATGGGGGAGAGG+GGG | - | chr2.1:17882237-17882256 | MS.gene069827:intron | 55.0% | |
| TCTCGGCTGAGAGGCTACAA+TGG | + | chr2.1:17881451-17881470 | None:intergenic | 55.0% | |
| TGAAGGAACCGGTCATGAGC+TGG | - | chr2.1:17881281-17881300 | MS.gene069827:intron | 55.0% | |
| TTATTCGATGGGGGAGAGGG+GGG | - | chr2.1:17882238-17882257 | MS.gene069827:intron | 55.0% | |
| ! | AGCTCATGACCGGTTCCTTC+AGG | + | chr2.1:17881282-17881301 | None:intergenic | 55.0% |
| ! | AGCTGCTGGTGATGAGCATG+AGG | - | chr2.1:17880789-17880808 | MS.gene069827:intron | 55.0% |
| ! | CCAAGCCTTGTCCCACTAAG+TGG | + | chr2.1:17884486-17884505 | None:intergenic | 55.0% |
| ! | CCCTCCCCTTTTATTGGGCT+TGG | - | chr2.1:17884368-17884387 | MS.gene069827:intron | 55.0% |
| ! | TGAGGCACAGGAGCGTAAGT+TGG | - | chr2.1:17882388-17882407 | MS.gene069827:CDS | 55.0% |
| CAACCGTTCTCCGACGCATG+CGG | + | chr2.1:17879906-17879925 | None:intergenic | 60.0% | |
| GATAAAGGGGGGGGCAAAGG+AGG | - | chr2.1:17881380-17881399 | MS.gene069827:intron | 60.0% | |
| GGCAAGAGAGGGAAGCTCGA+CGG | - | chr2.1:17880842-17880861 | MS.gene069827:intron | 60.0% | |
| GGGTCTCAATCTCGGCTGAG+AGG | + | chr2.1:17881460-17881479 | None:intergenic | 60.0% | |
| ! | AGGTCGGCTTTCGGGTGTCA+TGG | - | chr2.1:17885153-17885172 | MS.gene069827:intron | 60.0% |
| ! | GGATGAAGAGCGTGAGGCAC+AGG | - | chr2.1:17882376-17882395 | MS.gene069827:CDS | 60.0% |
| AAAGGGGGGGGCAAAGGAGG+AGG | - | chr2.1:17881383-17881402 | MS.gene069827:intron | 65.0% | |
| AGAGAGGGAAGCTCGACGGC+AGG | - | chr2.1:17880846-17880865 | MS.gene069827:intron | 65.0% | |
| CGTCGGAGAACGGTTGCGTC+TGG | - | chr2.1:17879910-17879929 | MS.gene069827:intron | 65.0% | |
| GCTCCGCCTGCAACGCAACA+AGG | - | chr2.1:17879949-17879968 | MS.gene069827:intron | 65.0% | |
| TCGCCGCATGCGTCGGAGAA+CGG | - | chr2.1:17879900-17879919 | MS.gene069827:intron | 65.0% | |
| ACGCATGCGGCGAGTAGCGG+TGG | + | chr2.1:17879893-17879912 | None:intergenic | 70.0% | |
| CCGACGCATGCGGCGAGTAG+CGG | + | chr2.1:17879896-17879915 | None:intergenic | 70.0% | |
| CCGCTACTCGCCGCATGCGT+CGG | - | chr2.1:17879893-17879912 | MS.gene069827:intron | 70.0% | |
| GTAGCGGTGGCACGTGCAGC+AGG | + | chr2.1:17879880-17879899 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 17879649 | 17885360 | 17879649 | ID=MS.gene069827 |
| chr2.1 | mRNA | 17879649 | 17885360 | 17879649 | ID=MS.gene069827.t1;Parent=MS.gene069827 |
| chr2.1 | exon | 17885235 | 17885360 | 17885235 | ID=MS.gene069827.t1.exon1;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17885235 | 17885360 | 17885235 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17885039 | 17885147 | 17885039 | ID=MS.gene069827.t1.exon2;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17885039 | 17885147 | 17885039 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17884142 | 17884245 | 17884142 | ID=MS.gene069827.t1.exon3;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17884142 | 17884245 | 17884142 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17882600 | 17882689 | 17882600 | ID=MS.gene069827.t1.exon4;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17882600 | 17882689 | 17882600 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17882358 | 17882516 | 17882358 | ID=MS.gene069827.t1.exon5;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17882358 | 17882516 | 17882358 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17882116 | 17882172 | 17882116 | ID=MS.gene069827.t1.exon6;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17882116 | 17882172 | 17882116 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17880291 | 17880327 | 17880291 | ID=MS.gene069827.t1.exon7;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17880291 | 17880327 | 17880291 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| chr2.1 | exon | 17879649 | 17879854 | 17879649 | ID=MS.gene069827.t1.exon8;Parent=MS.gene069827.t1 |
| chr2.1 | CDS | 17879649 | 17879854 | 17879649 | ID=cds.MS.gene069827.t1;Parent=MS.gene069827.t1 |
| Gene Sequence |
| Protein sequence |
