Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070788.t1 | XP_013448269.1 | 99.7 | 313 | 1 | 0 | 1 | 313 | 46 | 358 | 2.00E-174 | 621.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070788.t1 | Q9FKS8 | 86.6 | 313 | 42 | 0 | 1 | 313 | 49 | 361 | 3.3e-154 | 545.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070788.t1 | A0A072TYP2 | 99.7 | 313 | 1 | 0 | 1 | 313 | 46 | 358 | 1.4e-174 | 621.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050173 | MS.gene070788 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene070788 | 0.805912 | 1.06E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene070788 | 0.843264 | 1.56E-58 | -1.69E-46 |
| MS.gene054056 | MS.gene070788 | 0.833188 | 6.16E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene070788 | 0.807051 | 6.10E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene070788 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene058109 | MS.gene070788 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene070788 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene070788 | 0.808759 | 2.64E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene070788 | 0.826626 | 2.45E-54 | -1.69E-46 |
| MS.gene059691 | MS.gene070788 | 0.824109 | 9.64E-54 | -1.69E-46 |
| MS.gene059694 | MS.gene070788 | 0.832001 | 1.21E-55 | -1.69E-46 |
| MS.gene059697 | MS.gene070788 | 0.834164 | 3.51E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070788.t1 | MTR_7g038910 | 99.681 | 313 | 1 | 0 | 1 | 313 | 46 | 358 | 0.0 | 641 |
| MS.gene070788.t1 | MTR_7g038910 | 99.361 | 313 | 2 | 0 | 1 | 313 | 46 | 358 | 0.0 | 641 |
| MS.gene070788.t1 | MTR_7g038910 | 99.681 | 313 | 1 | 0 | 1 | 313 | 46 | 358 | 0.0 | 639 |
| MS.gene070788.t1 | MTR_6g022790 | 85.304 | 313 | 46 | 0 | 1 | 313 | 58 | 370 | 0.0 | 557 |
| MS.gene070788.t1 | MTR_2g101920 | 84.713 | 314 | 47 | 1 | 1 | 313 | 63 | 376 | 0.0 | 548 |
| MS.gene070788.t1 | MTR_6g023065 | 81.150 | 313 | 59 | 0 | 1 | 313 | 66 | 378 | 0.0 | 537 |
| MS.gene070788.t1 | MTR_6g022780 | 80.892 | 314 | 59 | 1 | 1 | 313 | 30 | 343 | 0.0 | 531 |
| MS.gene070788.t1 | MTR_6g023075 | 78.981 | 314 | 65 | 1 | 1 | 313 | 30 | 343 | 0.0 | 521 |
| MS.gene070788.t1 | MTR_3g085820 | 72.699 | 326 | 89 | 0 | 1 | 326 | 49 | 374 | 7.54e-178 | 498 |
| MS.gene070788.t1 | MTR_2g096830 | 76.752 | 314 | 72 | 1 | 1 | 313 | 30 | 343 | 3.11e-174 | 487 |
| MS.gene070788.t1 | MTR_2g096830 | 77.070 | 314 | 71 | 1 | 1 | 313 | 30 | 343 | 2.30e-173 | 488 |
| MS.gene070788.t1 | MTR_0531s0020 | 80.556 | 288 | 56 | 0 | 1 | 288 | 65 | 352 | 7.68e-169 | 474 |
| MS.gene070788.t1 | MTR_4g103890 | 67.732 | 313 | 101 | 0 | 1 | 313 | 26 | 338 | 8.79e-167 | 471 |
| MS.gene070788.t1 | MTR_8g080120 | 67.093 | 313 | 103 | 0 | 1 | 313 | 39 | 351 | 2.89e-162 | 460 |
| MS.gene070788.t1 | MTR_5g054730 | 64.217 | 313 | 112 | 0 | 1 | 313 | 42 | 354 | 1.53e-154 | 441 |
| MS.gene070788.t1 | MTR_1g093020 | 64.217 | 313 | 112 | 0 | 1 | 313 | 40 | 352 | 4.01e-154 | 439 |
| MS.gene070788.t1 | MTR_1g093020 | 64.217 | 313 | 112 | 0 | 1 | 313 | 40 | 352 | 7.70e-154 | 439 |
| MS.gene070788.t1 | MTR_1g093030 | 62.620 | 313 | 117 | 0 | 1 | 313 | 40 | 352 | 2.38e-150 | 430 |
| MS.gene070788.t1 | MTR_3g005740 | 53.251 | 323 | 147 | 2 | 1 | 319 | 68 | 390 | 1.30e-127 | 373 |
| MS.gene070788.t1 | MTR_2g012470 | 39.103 | 312 | 178 | 5 | 2 | 302 | 112 | 422 | 7.72e-71 | 229 |
| MS.gene070788.t1 | MTR_5g023240 | 37.931 | 319 | 186 | 5 | 2 | 308 | 103 | 421 | 3.27e-68 | 222 |
| MS.gene070788.t1 | MTR_3g115090 | 37.771 | 323 | 188 | 4 | 2 | 311 | 101 | 423 | 7.07e-68 | 221 |
| MS.gene070788.t1 | MTR_5g023260 | 36.875 | 320 | 189 | 5 | 2 | 308 | 124 | 443 | 1.39e-61 | 205 |
| MS.gene070788.t1 | MTR_4g075750 | 34.259 | 324 | 196 | 4 | 2 | 308 | 87 | 410 | 3.56e-58 | 195 |
| MS.gene070788.t1 | MTR_3g110660 | 33.333 | 318 | 180 | 8 | 1 | 294 | 49 | 358 | 6.01e-43 | 154 |
| MS.gene070788.t1 | MTR_1g007380 | 33.758 | 314 | 184 | 8 | 1 | 294 | 39 | 348 | 3.32e-40 | 147 |
| MS.gene070788.t1 | MTR_3g110660 | 33.775 | 302 | 168 | 8 | 1 | 278 | 49 | 342 | 8.54e-40 | 144 |
| MS.gene070788.t1 | MTR_1g105980 | 33.333 | 312 | 178 | 10 | 1 | 289 | 38 | 342 | 1.68e-39 | 145 |
| MS.gene070788.t1 | MTR_1g105995 | 31.661 | 319 | 184 | 8 | 1 | 294 | 37 | 346 | 3.42e-38 | 141 |
| MS.gene070788.t1 | MTR_1g105990 | 32.817 | 323 | 168 | 11 | 1 | 289 | 37 | 344 | 1.76e-37 | 139 |
| MS.gene070788.t1 | MTR_4g055610 | 31.561 | 301 | 184 | 8 | 1 | 288 | 56 | 347 | 2.20e-37 | 139 |
| MS.gene070788.t1 | MTR_3g088475 | 31.833 | 311 | 193 | 7 | 1 | 295 | 50 | 357 | 6.38e-37 | 138 |
| MS.gene070788.t1 | MTR_3g088465 | 32.372 | 312 | 190 | 9 | 1 | 295 | 50 | 357 | 3.50e-36 | 135 |
| MS.gene070788.t1 | MTR_1g106000 | 29.755 | 326 | 190 | 8 | 1 | 294 | 31 | 349 | 2.13e-35 | 134 |
| MS.gene070788.t1 | MTR_1g070470 | 31.597 | 288 | 175 | 8 | 9 | 288 | 47 | 320 | 3.63e-35 | 133 |
| MS.gene070788.t1 | MTR_3g461480 | 29.014 | 355 | 210 | 9 | 1 | 319 | 43 | 391 | 4.98e-35 | 133 |
| MS.gene070788.t1 | MTR_8g099320 | 29.052 | 327 | 210 | 9 | 1 | 312 | 43 | 362 | 5.13e-35 | 132 |
| MS.gene070788.t1 | MTR_3g088455 | 30.990 | 313 | 192 | 7 | 1 | 295 | 50 | 356 | 7.82e-35 | 132 |
| MS.gene070788.t1 | MTR_1g492640 | 31.193 | 327 | 204 | 9 | 1 | 313 | 75 | 394 | 1.19e-34 | 132 |
| MS.gene070788.t1 | MTR_3g096830 | 30.141 | 355 | 202 | 11 | 1 | 319 | 42 | 386 | 2.57e-34 | 131 |
| MS.gene070788.t1 | MTR_3g461440 | 29.677 | 310 | 198 | 8 | 1 | 294 | 39 | 344 | 5.67e-34 | 130 |
| MS.gene070788.t1 | MTR_3g461470 | 29.773 | 309 | 199 | 8 | 1 | 294 | 39 | 344 | 6.25e-33 | 127 |
| MS.gene070788.t1 | MTR_3g096800 | 31.366 | 322 | 179 | 9 | 1 | 294 | 49 | 356 | 6.86e-33 | 127 |
| MS.gene070788.t1 | MTR_5g096840 | 29.379 | 354 | 210 | 11 | 1 | 319 | 45 | 393 | 1.00e-32 | 127 |
| MS.gene070788.t1 | MTR_1g492640 | 31.126 | 302 | 185 | 8 | 1 | 286 | 57 | 351 | 4.57e-32 | 123 |
| MS.gene070788.t1 | MTR_1g492640 | 31.126 | 302 | 185 | 8 | 1 | 286 | 75 | 369 | 5.02e-32 | 123 |
| MS.gene070788.t1 | MTR_1g029750 | 31.013 | 316 | 190 | 9 | 1 | 295 | 51 | 359 | 7.46e-32 | 124 |
| MS.gene070788.t1 | MTR_3g061390 | 27.762 | 353 | 216 | 9 | 1 | 319 | 39 | 386 | 1.28e-31 | 123 |
| MS.gene070788.t1 | MTR_4g073520 | 29.907 | 321 | 191 | 9 | 1 | 294 | 75 | 388 | 2.99e-31 | 123 |
| MS.gene070788.t1 | MTR_4g073520 | 29.653 | 317 | 197 | 8 | 1 | 294 | 75 | 388 | 3.65e-31 | 123 |
| MS.gene070788.t1 | MTR_3g110430 | 27.331 | 311 | 205 | 8 | 1 | 294 | 77 | 383 | 2.38e-30 | 120 |
| MS.gene070788.t1 | MTR_3g096840 | 31.173 | 324 | 177 | 11 | 1 | 294 | 55 | 362 | 4.15e-30 | 119 |
| MS.gene070788.t1 | MTR_1g007270 | 29.260 | 311 | 198 | 10 | 1 | 294 | 49 | 354 | 1.02e-28 | 115 |
| MS.gene070788.t1 | MTR_1g007240 | 28.896 | 308 | 192 | 9 | 1 | 288 | 28 | 328 | 1.21e-28 | 115 |
| MS.gene070788.t1 | MTR_8g094290 | 28.662 | 314 | 198 | 8 | 1 | 294 | 47 | 354 | 6.68e-28 | 113 |
| MS.gene070788.t1 | MTR_3g461430 | 25.806 | 310 | 212 | 7 | 1 | 295 | 46 | 352 | 1.17e-27 | 113 |
| MS.gene070788.t1 | MTR_5g096850 | 29.688 | 320 | 190 | 13 | 1 | 297 | 41 | 348 | 1.81e-27 | 112 |
| MS.gene070788.t1 | MTR_2g031750 | 25.879 | 313 | 195 | 8 | 1 | 288 | 28 | 328 | 7.59e-26 | 107 |
| MS.gene070788.t1 | MTR_1g007180 | 28.155 | 309 | 193 | 9 | 1 | 288 | 28 | 328 | 3.52e-25 | 105 |
| MS.gene070788.t1 | MTR_3g461440 | 30.049 | 203 | 130 | 4 | 98 | 294 | 11 | 207 | 6.38e-24 | 100 |
| MS.gene070788.t1 | MTR_1g492640 | 30.418 | 263 | 164 | 8 | 63 | 313 | 7 | 262 | 1.01e-23 | 100 |
| MS.gene070788.t1 | MTR_3g110420 | 26.299 | 308 | 202 | 9 | 1 | 288 | 40 | 342 | 6.49e-23 | 99.4 |
| MS.gene070788.t1 | MTR_4g104510 | 27.157 | 313 | 205 | 12 | 13 | 313 | 68 | 369 | 1.28e-22 | 98.2 |
| MS.gene070788.t1 | MTR_4g104510 | 27.157 | 313 | 205 | 12 | 13 | 313 | 68 | 369 | 1.36e-22 | 98.2 |
| MS.gene070788.t1 | MTR_3g110420 | 25.839 | 298 | 196 | 9 | 1 | 278 | 40 | 332 | 8.36e-20 | 89.0 |
| MS.gene070788.t1 | MTR_5g081630 | 27.451 | 306 | 205 | 12 | 13 | 312 | 1 | 295 | 7.17e-19 | 87.0 |
| MS.gene070788.t1 | MTR_2g031750 | 24.528 | 265 | 166 | 7 | 46 | 288 | 9 | 261 | 2.53e-17 | 82.4 |
| MS.gene070788.t1 | MTR_5g017200 | 31.222 | 221 | 137 | 6 | 1 | 210 | 44 | 260 | 7.41e-15 | 73.9 |
| MS.gene070788.t1 | MTR_1g492640 | 29.050 | 179 | 124 | 2 | 1 | 177 | 57 | 234 | 7.34e-14 | 70.9 |
| MS.gene070788.t1 | MTR_1g492640 | 29.032 | 186 | 129 | 2 | 1 | 184 | 75 | 259 | 9.58e-14 | 70.9 |
| MS.gene070788.t1 | MTR_1g007180 | 27.746 | 173 | 114 | 4 | 124 | 288 | 75 | 244 | 4.29e-13 | 69.7 |
| MS.gene070788.t1 | MTR_3g069960 | 25.168 | 298 | 198 | 10 | 31 | 315 | 19 | 304 | 8.01e-13 | 68.9 |
| MS.gene070788.t1 | MTR_3g069960 | 25.168 | 298 | 198 | 10 | 31 | 315 | 72 | 357 | 1.00e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070788.t1 | AT5G40780 | 86.581 | 313 | 42 | 0 | 1 | 313 | 1 | 313 | 0.0 | 564 |
| MS.gene070788.t1 | AT5G40780 | 86.581 | 313 | 42 | 0 | 1 | 313 | 1 | 313 | 0.0 | 564 |
| MS.gene070788.t1 | AT5G40780 | 86.306 | 314 | 43 | 0 | 1 | 314 | 49 | 362 | 0.0 | 563 |
| MS.gene070788.t1 | AT1G24400 | 80.511 | 313 | 61 | 0 | 1 | 313 | 44 | 356 | 0.0 | 527 |
| MS.gene070788.t1 | AT1G48640 | 78.914 | 313 | 66 | 0 | 1 | 313 | 56 | 368 | 0.0 | 508 |
| MS.gene070788.t1 | AT1G67640 | 78.193 | 321 | 69 | 1 | 1 | 320 | 44 | 364 | 3.83e-180 | 506 |
| MS.gene070788.t1 | AT1G61270 | 67.284 | 324 | 104 | 1 | 1 | 322 | 49 | 372 | 4.67e-159 | 452 |
| MS.gene070788.t1 | AT3G01760 | 65.644 | 326 | 107 | 3 | 1 | 322 | 47 | 371 | 7.45e-153 | 437 |
| MS.gene070788.t1 | AT1G25530 | 63.898 | 313 | 113 | 0 | 1 | 313 | 43 | 355 | 1.27e-149 | 428 |
| MS.gene070788.t1 | AT1G71680 | 58.599 | 314 | 129 | 1 | 1 | 313 | 50 | 363 | 3.64e-126 | 366 |
| MS.gene070788.t1 | AT1G71680 | 58.438 | 320 | 132 | 1 | 1 | 319 | 50 | 369 | 2.08e-125 | 367 |
| MS.gene070788.t1 | AT1G47670 | 39.423 | 312 | 177 | 5 | 2 | 302 | 110 | 420 | 7.43e-72 | 232 |
| MS.gene070788.t1 | AT4G35180 | 33.438 | 320 | 195 | 5 | 2 | 308 | 74 | 388 | 2.48e-50 | 174 |
| MS.gene070788.t1 | AT4G35180 | 37.200 | 250 | 147 | 4 | 2 | 246 | 74 | 318 | 4.73e-47 | 162 |
| MS.gene070788.t1 | AT1G10010 | 35.000 | 320 | 171 | 11 | 1 | 294 | 43 | 351 | 1.66e-38 | 142 |
| MS.gene070788.t1 | AT1G10010 | 35.000 | 320 | 171 | 11 | 1 | 294 | 44 | 352 | 1.92e-38 | 142 |
| MS.gene070788.t1 | AT1G58360 | 32.911 | 316 | 183 | 11 | 1 | 296 | 52 | 358 | 5.71e-37 | 139 |
| MS.gene070788.t1 | AT1G08230 | 32.047 | 337 | 208 | 8 | 1 | 322 | 43 | 373 | 4.02e-36 | 135 |
| MS.gene070788.t1 | AT5G49630 | 33.121 | 314 | 187 | 9 | 1 | 294 | 48 | 358 | 1.02e-33 | 129 |
| MS.gene070788.t1 | AT5G09220 | 30.696 | 316 | 189 | 9 | 1 | 294 | 61 | 368 | 3.38e-33 | 128 |
| MS.gene070788.t1 | AT5G41800 | 28.354 | 328 | 213 | 9 | 1 | 313 | 42 | 362 | 3.68e-32 | 125 |
| MS.gene070788.t1 | AT1G44100 | 29.688 | 320 | 195 | 9 | 1 | 295 | 43 | 357 | 5.61e-32 | 125 |
| MS.gene070788.t1 | AT5G63850 | 31.833 | 311 | 180 | 10 | 1 | 288 | 34 | 335 | 3.49e-31 | 122 |
| MS.gene070788.t1 | AT1G77380 | 29.226 | 349 | 204 | 10 | 1 | 312 | 45 | 387 | 2.87e-30 | 120 |
| MS.gene070788.t1 | AT5G23810 | 29.688 | 320 | 188 | 10 | 1 | 294 | 41 | 349 | 5.30e-28 | 114 |
| MS.gene070788.t1 | AT5G23810 | 29.126 | 309 | 182 | 10 | 1 | 283 | 41 | 338 | 4.78e-24 | 101 |
| MS.gene070788.t1 | AT1G08230 | 31.183 | 279 | 173 | 7 | 57 | 322 | 1 | 273 | 6.84e-24 | 100 |
| MS.gene070788.t1 | AT1G08230 | 31.373 | 255 | 156 | 7 | 81 | 322 | 6 | 254 | 4.62e-21 | 92.4 |
| MS.gene070788.t1 | AT1G08230 | 31.373 | 255 | 156 | 7 | 81 | 322 | 6 | 254 | 4.62e-21 | 92.4 |
| MS.gene070788.t1 | AT1G08230 | 31.373 | 255 | 156 | 7 | 81 | 322 | 6 | 254 | 4.62e-21 | 92.4 |
| MS.gene070788.t1 | AT3G55740 | 27.832 | 309 | 202 | 11 | 13 | 313 | 1 | 296 | 1.77e-20 | 91.7 |
| MS.gene070788.t1 | AT3G55740 | 27.832 | 309 | 202 | 11 | 13 | 313 | 1 | 296 | 1.77e-20 | 91.7 |
| MS.gene070788.t1 | AT3G55740 | 27.832 | 309 | 202 | 11 | 13 | 313 | 57 | 352 | 2.37e-20 | 91.7 |
| MS.gene070788.t1 | AT2G36590 | 27.778 | 306 | 206 | 11 | 13 | 313 | 54 | 349 | 1.27e-19 | 89.7 |
| MS.gene070788.t1 | AT2G39890 | 26.623 | 308 | 207 | 11 | 13 | 313 | 1 | 296 | 1.01e-18 | 86.7 |
| MS.gene070788.t1 | AT2G39890 | 26.471 | 306 | 210 | 12 | 13 | 313 | 60 | 355 | 1.63e-18 | 86.3 |
| MS.gene070788.t1 | AT2G39890 | 26.471 | 306 | 210 | 12 | 13 | 313 | 60 | 355 | 1.63e-18 | 86.3 |
| MS.gene070788.t1 | AT2G36590 | 27.881 | 269 | 181 | 10 | 13 | 278 | 54 | 312 | 6.70e-16 | 77.8 |
| MS.gene070788.t1 | AT5G23810 | 28.444 | 225 | 128 | 8 | 1 | 201 | 41 | 256 | 8.69e-13 | 68.2 |
Find 74 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACTTGAACTCTATTTC+TGG | 0.163457 | 7.3:-60781371 | MS.gene070788:CDS |
| CGGTTGCTCTCATTGGTTAT+TGG | 0.223733 | 7.3:-60780922 | MS.gene070788:CDS |
| TGTAGCTTTGTGCTACTTTC+CGG | 0.255496 | 7.3:-60780942 | MS.gene070788:CDS |
| GTTATAGAAAATGTTGATTA+TGG | 0.261549 | 7.3:-60781142 | MS.gene070788:CDS |
| CTCATTGGTTATTGGATGTT+TGG | 0.296914 | 7.3:-60780914 | MS.gene070788:CDS |
| TTTGTTGTTATCCATGTTAT+TGG | 0.301091 | 7.3:-60780821 | MS.gene070788:CDS |
| TACTTTCCGGTTGCTCTCAT+TGG | 0.312154 | 7.3:-60780929 | MS.gene070788:CDS |
| CCAGAAATAGAGTTCAAGTT+AGG | 0.313363 | 7.3:+60781371 | None:intergenic |
| ACTACCCCAGGAACTGTCTT+TGG | 0.323215 | 7.3:-60781106 | MS.gene070788:CDS |
| GCCATTGCAATAAGCCAGTT+TGG | 0.365199 | 7.3:+60780851 | None:intergenic |
| TTTGGTTTCTTCAATGCCCT+TGG | 0.367776 | 7.3:-60781088 | MS.gene070788:CDS |
| AAGAAACCAAAGACAGTTCC+TGG | 0.375264 | 7.3:+60781100 | None:intergenic |
| TCATCACATTATACACGTTA+TGG | 0.383988 | 7.3:-60781664 | MS.gene070788:CDS |
| CCAAGTTGCGCCATGGCATA+AGG | 0.384842 | 7.3:+60781923 | None:intergenic |
| AACATTGTCTACATGGTAAC+TGG | 0.392632 | 7.3:-60781506 | MS.gene070788:CDS |
| GAACTGGGTCAATATGCTTT+TGG | 0.394335 | 7.3:-60781587 | MS.gene070788:CDS |
| GTTTCAATCATGTCAAATAC+TGG | 0.407218 | 7.3:+60780667 | None:intergenic |
| GCACAAAGCTACAACTATAT+AGG | 0.415908 | 7.3:+60780952 | None:intergenic |
| CTCCACATAGGACCCTTAGA+TGG | 0.416492 | 7.3:+60780989 | None:intergenic |
| TTTCGATAGATATCATGAAC+TGG | 0.417369 | 7.3:-60781603 | MS.gene070788:CDS |
| ATTATACACGTTATGGCAAA+TGG | 0.419864 | 7.3:-60781657 | MS.gene070788:CDS |
| CTTCAATGCCCTTGGAGATG+TGG | 0.427219 | 7.3:-60781080 | MS.gene070788:CDS |
| CAACAACTTATTGTTGAAGT+TGG | 0.451243 | 7.3:-60781533 | MS.gene070788:CDS |
| CAATAACCAATGAGAGCAAC+CGG | 0.459224 | 7.3:+60780923 | None:intergenic |
| ATAAAACGCAACATTGTAGT+AGG | 0.463430 | 7.3:+60780616 | None:intergenic |
| CAGTTACTCTACAATTGCTT+GGG | 0.463934 | 7.3:-60781185 | MS.gene070788:CDS |
| GCAGTTACTCTACAATTGCT+TGG | 0.470215 | 7.3:-60781186 | MS.gene070788:intron |
| CAAGACAAGCTGAATCTCCT+TGG | 0.473939 | 7.3:+60780022 | None:intergenic |
| CCGCCGCTATCATGTCGTTA+AGG | 0.476124 | 7.3:-60781337 | MS.gene070788:intron |
| CCTTATGCCATGGCGCAACT+TGG | 0.477863 | 7.3:-60781923 | MS.gene070788:CDS |
| TGGGCAGCTTCTGCTCATAA+AGG | 0.483954 | 7.3:-60781166 | MS.gene070788:CDS |
| CACAATGTTACTGCCATGGT+TGG | 0.488589 | 7.3:-60781965 | None:intergenic |
| CAGAAATAGAGTTCAAGTTA+GGG | 0.490914 | 7.3:+60781372 | None:intergenic |
| CCATGTTATTGGAAGCTACC+AGG | 0.497486 | 7.3:-60780810 | MS.gene070788:intron |
| TATTGTACGAAATGTGTATG+TGG | 0.498916 | 7.3:-60780596 | MS.gene070788:CDS |
| CCTGGTAGCTTCCAATAACA+TGG | 0.499033 | 7.3:+60780810 | None:intergenic |
| CAAGGAGATTCAGCTTGTCT+TGG | 0.504542 | 7.3:-60780021 | MS.gene070788:CDS |
| CAAGTTGCGCCATGGCATAA+GGG | 0.504930 | 7.3:+60781924 | None:intergenic |
| TGACTTTAGAGAAACCAAAC+TGG | 0.513027 | 7.3:-60780865 | MS.gene070788:CDS |
| TGGTGTTAACATTGTCTACA+TGG | 0.520753 | 7.3:-60781513 | MS.gene070788:CDS |
| ATGCCATGGCGCAACTTGGA+TGG | 0.528431 | 7.3:-60781919 | MS.gene070788:intron |
| GTTACTGCCATGGTTGGAGC+TGG | 0.535918 | 7.3:-60781959 | None:intergenic |
| ATTGTACGAAATGTGTATGT+GGG | 0.542188 | 7.3:-60780595 | MS.gene070788:intron |
| TCTTAGTCTCCCTTATGCCA+TGG | 0.544235 | 7.3:-60781933 | MS.gene070788:CDS |
| TTCAGCTACCATGCATAATG+TGG | 0.558234 | 7.3:-60780060 | MS.gene070788:intron |
| AATGGTTGAGATGCATGAAA+TGG | 0.559811 | 7.3:-60781639 | MS.gene070788:CDS |
| ACCAAACTGGCTTATTGCAA+TGG | 0.573822 | 7.3:-60780852 | MS.gene070788:CDS |
| TACAAAGCTACGACTACCCC+AGG | 0.575799 | 7.3:-60781118 | MS.gene070788:CDS |
| TAACAGTATTAGTCCTCTCA+TGG | 0.577651 | 7.3:-60781688 | MS.gene070788:CDS |
| AAGCAAAAGCCACATCTCCA+AGG | 0.583498 | 7.3:+60781071 | None:intergenic |
| GAGATGCATGAAATGGTACC+CGG | 0.589392 | 7.3:-60781632 | MS.gene070788:CDS |
| AGAAACCAAAGACAGTTCCT+GGG | 0.601129 | 7.3:+60781101 | None:intergenic |
| ACAATCACTCCTCTCCACAT+AGG | 0.605359 | 7.3:+60780977 | None:intergenic |
| AAGAACACCAGCTCCAACCA+TGG | 0.608052 | 7.3:+60781952 | None:intergenic |
| AACCATCTAAGGGTCCTATG+TGG | 0.613202 | 7.3:-60780991 | MS.gene070788:CDS |
| AGGACTAATACTGTTACTCC+AGG | 0.615520 | 7.3:+60781695 | None:intergenic |
| AGCAAAAGCCACATCTCCAA+GGG | 0.623365 | 7.3:+60781072 | None:intergenic |
| AAATAGAGTTCAAGTTAGGG+AGG | 0.624445 | 7.3:+60781375 | None:intergenic |
| ATTGCAAGCCACATTATGCA+TGG | 0.627374 | 7.3:+60780052 | None:intergenic |
| TTCGATAGATATCATGAACT+GGG | 0.632683 | 7.3:-60781602 | MS.gene070788:CDS |
| ATACCATCCAAGTTGCGCCA+TGG | 0.632975 | 7.3:+60781916 | None:intergenic |
| ACTTCAACAATAAGTTGTTG+TGG | 0.635960 | 7.3:+60781536 | None:intergenic |
| AGCAACAATTCCATCTACAC+CGG | 0.636630 | 7.3:-60781017 | MS.gene070788:CDS |
| TGACATGATTGAAACAGTGA+TGG | 0.651752 | 7.3:-60780659 | MS.gene070788:CDS |
| GTACCTTAACGACATGATAG+CGG | 0.653123 | 7.3:+60781334 | None:intergenic |
| TGCTTATGCTGGACACAACG+TGG | 0.655602 | 7.3:-60781053 | MS.gene070788:CDS |
| GGCTTGCAATCTACAAACCA+AGG | 0.655629 | 7.3:-60780039 | MS.gene070788:CDS |
| GTGAGACAAGACAAAGTGAA+CGG | 0.655631 | 7.3:+60781397 | None:intergenic |
| ATTGTCTACATGGTAACTGG+AGG | 0.663381 | 7.3:-60781503 | MS.gene070788:CDS |
| TCTAAGGGTCCTATGTGGAG+AGG | 0.663638 | 7.3:-60780986 | MS.gene070788:CDS |
| GAAACCAAAGACAGTTCCTG+GGG | 0.694600 | 7.3:+60781102 | None:intergenic |
| ATAATGTGATGAACCATGAG+AGG | 0.706479 | 7.3:+60781675 | None:intergenic |
| CCTTAACGACATGATAGCGG+CGG | 0.718608 | 7.3:+60781337 | None:intergenic |
| AGACAAGACAAAGTGAACGG+AGG | 0.734305 | 7.3:+60781400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAAAATAAAAAATT+AGG | - | chr7.3:60781507-60781526 | MS.gene070788:CDS | 0.0% |
| !! | AATTATATGTCAATTTATAT+TGG | + | chr7.3:60781696-60781715 | None:intergenic | 10.0% |
| !!! | AAAAATTGTTATTTATTTTC+AGG | - | chr7.3:60780242-60780261 | MS.gene070788:intron | 10.0% |
| !!! | AAAATTGTTATTTATTTTCA+GGG | - | chr7.3:60780243-60780262 | MS.gene070788:intron | 10.0% |
| !!! | AAGTTTTTATAAAAAATGAA+GGG | + | chr7.3:60781223-60781242 | None:intergenic | 10.0% |
| !!! | AAATTGTTATTTATTTTCAG+GGG | - | chr7.3:60780244-60780263 | MS.gene070788:intron | 15.0% |
| !!! | CAAGTTTTTATAAAAAATGA+AGG | + | chr7.3:60781224-60781243 | None:intergenic | 15.0% |
| !! | AACAAAATTCATGTTTGAAT+GGG | - | chr7.3:60780694-60780713 | MS.gene070788:intron | 20.0% |
| !! | AATGAAGATTAACAAATGAA+TGG | + | chr7.3:60780654-60780673 | None:intergenic | 20.0% |
| !! | TAACAAAATTCATGTTTGAA+TGG | - | chr7.3:60780693-60780712 | MS.gene070788:intron | 20.0% |
| !!! | GTTATAGAAAATGTTGATTA+TGG | - | chr7.3:60780821-60780840 | MS.gene070788:CDS | 20.0% |
| !!! | TAACAATTTTTGAGATTCAT+TGG | + | chr7.3:60780233-60780252 | None:intergenic | 20.0% |
| ! | AAAACATCCATAAAATTCAG+AGG | + | chr7.3:60780135-60780154 | None:intergenic | 25.0% |
| ! | ACAAAATTCATGTTTGAATG+GGG | - | chr7.3:60780695-60780714 | MS.gene070788:intron | 25.0% |
| ! | TCAGATAAAAATGAATCCAA+TGG | + | chr7.3:60781482-60781501 | None:intergenic | 25.0% |
| !! | CATTTAACCTCTGAATTTTA+TGG | - | chr7.3:60780125-60780144 | MS.gene070788:intron | 25.0% |
| !! | TAATTGGTTGAACGAATTTT+CGG | - | chr7.3:60781568-60781587 | MS.gene070788:CDS | 25.0% |
| !!! | CAATTTGATTTTTTTGCAGT+CGG | + | chr7.3:60780521-60780540 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATCCATGTTAT+TGG | - | chr7.3:60781142-60781161 | MS.gene070788:CDS | 25.0% |
| AAAATTCATGTTTGAATGGG+GGG | - | chr7.3:60780697-60780716 | MS.gene070788:intron | 30.0% | |
| ACTTCAACAATAAGTTGTTG+TGG | + | chr7.3:60780430-60780449 | None:intergenic | 30.0% | |
| ATAAAACGCAACATTGTAGT+AGG | + | chr7.3:60781350-60781369 | None:intergenic | 30.0% | |
| ATTATACACGTTATGGCAAA+TGG | - | chr7.3:60780306-60780325 | MS.gene070788:intron | 30.0% | |
| ATTGTACGAAATGTGTATGT+GGG | - | chr7.3:60781368-60781387 | MS.gene070788:CDS | 30.0% | |
| CAAAATTCATGTTTGAATGG+GGG | - | chr7.3:60780696-60780715 | MS.gene070788:intron | 30.0% | |
| CAACAACTTATTGTTGAAGT+TGG | - | chr7.3:60780430-60780449 | MS.gene070788:intron | 30.0% | |
| GTTTCAATCATGTCAAATAC+TGG | + | chr7.3:60781299-60781318 | None:intergenic | 30.0% | |
| TAGCTTACAAAGTATGTTGT+TGG | + | chr7.3:60781810-60781829 | None:intergenic | 30.0% | |
| TATTGTACGAAATGTGTATG+TGG | - | chr7.3:60781367-60781386 | MS.gene070788:CDS | 30.0% | |
| TCATCACATTATACACGTTA+TGG | - | chr7.3:60780299-60780318 | MS.gene070788:intron | 30.0% | |
| TTCGATAGATATCATGAACT+GGG | - | chr7.3:60780361-60780380 | MS.gene070788:intron | 30.0% | |
| TTTCGATAGATATCATGAAC+TGG | - | chr7.3:60780360-60780379 | MS.gene070788:intron | 30.0% | |
| ! | AATTGGTTGAACGAATTTTC+GGG | - | chr7.3:60781569-60781588 | MS.gene070788:CDS | 30.0% |
| ! | ATATCTATCGAAACGTTTTC+CGG | + | chr7.3:60780353-60780372 | None:intergenic | 30.0% |
| ! | ATATGCTTTTGGTGAAAAGT+TGG | - | chr7.3:60780387-60780406 | MS.gene070788:intron | 30.0% |
| ! | CAGAAATAGAGTTCAAGTTA+GGG | + | chr7.3:60780594-60780613 | None:intergenic | 30.0% |
| ! | TATGCTTTTGGTGAAAAGTT+GGG | - | chr7.3:60780388-60780407 | MS.gene070788:intron | 30.0% |
| !! | AATTCACGAAACTACTTTTC+GGG | + | chr7.3:60781431-60781450 | None:intergenic | 30.0% |
| !! | CAATTCACGAAACTACTTTT+CGG | + | chr7.3:60781432-60781451 | None:intergenic | 30.0% |
| !! | GCTATTACTTTTCCGTTTTT+CGG | - | chr7.3:60781747-60781766 | MS.gene070788:intron | 30.0% |
| !!! | CTTTGAAATTGAGTTTTACC+TGG | + | chr7.3:60781174-60781193 | None:intergenic | 30.0% |
| AACATTGTCTACATGGTAAC+TGG | - | chr7.3:60780457-60780476 | MS.gene070788:intron | 35.0% | |
| AACCAATTAAAGCAGGTAAC+TGG | + | chr7.3:60781557-60781576 | None:intergenic | 35.0% | |
| AAGCAATTGTAGAGTAACTG+CGG | + | chr7.3:60780778-60780797 | None:intergenic | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | - | chr7.3:60780324-60780343 | MS.gene070788:intron | 35.0% | |
| ACTCTCGCTATATAATCCTT+CGG | - | chr7.3:60781594-60781613 | MS.gene070788:CDS | 35.0% | |
| AGAATTGCTATATATCCCGA+AGG | + | chr7.3:60781613-60781632 | None:intergenic | 35.0% | |
| ATAATGTGATGAACCATGAG+AGG | + | chr7.3:60780291-60780310 | None:intergenic | 35.0% | |
| CAGTTACTCTACAATTGCTT+GGG | - | chr7.3:60780778-60780797 | MS.gene070788:intron | 35.0% | |
| CCTAACTTGAACTCTATTTC+TGG | - | chr7.3:60780592-60780611 | MS.gene070788:intron | 35.0% | |
| GCACAAAGCTACAACTATAT+AGG | + | chr7.3:60781014-60781033 | None:intergenic | 35.0% | |
| TAACAGTATTAGTCCTCTCA+TGG | - | chr7.3:60780275-60780294 | MS.gene070788:intron | 35.0% | |
| TACTCTTAAGACTCCTCATT+AGG | - | chr7.3:60780176-60780195 | MS.gene070788:intron | 35.0% | |
| TGACATGATTGAAACAGTGA+TGG | - | chr7.3:60781304-60781323 | MS.gene070788:intron | 35.0% | |
| TGTATTGAAGTCACCTAATG+AGG | + | chr7.3:60780192-60780211 | None:intergenic | 35.0% | |
| TTCGTTCAACCAATTAAAGC+AGG | + | chr7.3:60781564-60781583 | None:intergenic | 35.0% | |
| ! | AAATAGAGTTCAAGTTAGGG+AGG | + | chr7.3:60780591-60780610 | None:intergenic | 35.0% |
| ! | CCAGAAATAGAGTTCAAGTT+AGG | + | chr7.3:60780595-60780614 | None:intergenic | 35.0% |
| ! | CTCATTGGTTATTGGATGTT+TGG | - | chr7.3:60781049-60781068 | MS.gene070788:CDS | 35.0% |
| ! | TATCTATCGAAACGTTTTCC+GGG | + | chr7.3:60780352-60780371 | None:intergenic | 35.0% |
| ! | TGACTTTAGAGAAACCAAAC+TGG | - | chr7.3:60781098-60781117 | MS.gene070788:CDS | 35.0% |
| ! | TGGTGTTAACATTGTCTACA+TGG | - | chr7.3:60780450-60780469 | MS.gene070788:intron | 35.0% |
| !! | ATTACTTTTCCGTTTTTCGG+TGG | - | chr7.3:60781750-60781769 | MS.gene070788:intron | 35.0% |
| !! | TTATTTATTTTCAGGGGTCC+TGG | - | chr7.3:60780250-60780269 | MS.gene070788:intron | 35.0% |
| AAGAAACCAAAGACAGTTCC+TGG | + | chr7.3:60780866-60780885 | None:intergenic | 40.0% | |
| AATTAAAGCAGGTAACTGGC+CGG | + | chr7.3:60781553-60781572 | None:intergenic | 40.0% | |
| ACACCGGAAAAACCATCTAA+GGG | - | chr7.3:60780962-60780981 | MS.gene070788:CDS | 40.0% | |
| AGAAACCAAAGACAGTTCCT+GGG | + | chr7.3:60780865-60780884 | None:intergenic | 40.0% | |
| AGCAACAATTCCATCTACAC+CGG | - | chr7.3:60780946-60780965 | MS.gene070788:CDS | 40.0% | |
| AGGACTAATACTGTTACTCC+AGG | + | chr7.3:60780271-60780290 | None:intergenic | 40.0% | |
| ATTGCAAGCCACATTATGCA+TGG | + | chr7.3:60781914-60781933 | None:intergenic | 40.0% | |
| ATTGTCTACATGGTAACTGG+AGG | - | chr7.3:60780460-60780479 | MS.gene070788:intron | 40.0% | |
| CAATAACCAATGAGAGCAAC+CGG | + | chr7.3:60781043-60781062 | None:intergenic | 40.0% | |
| CTCTCGCTATATAATCCTTC+GGG | - | chr7.3:60781595-60781614 | MS.gene070788:CDS | 40.0% | |
| GCAGTTACTCTACAATTGCT+TGG | - | chr7.3:60780777-60780796 | MS.gene070788:intron | 40.0% | |
| GTACCTTAACGACATGATAG+CGG | + | chr7.3:60780632-60780651 | None:intergenic | 40.0% | |
| GTGAGACAAGACAAAGTGAA+CGG | + | chr7.3:60780569-60780588 | None:intergenic | 40.0% | |
| TACACCGGAAAAACCATCTA+AGG | - | chr7.3:60780961-60780980 | MS.gene070788:CDS | 40.0% | |
| TTCAGCTACCATGCATAATG+TGG | - | chr7.3:60781903-60781922 | MS.gene070788:intron | 40.0% | |
| ! | ACCAAACTGGCTTATTGCAA+TGG | - | chr7.3:60781111-60781130 | MS.gene070788:CDS | 40.0% |
| ! | GAACTGGGTCAATATGCTTT+TGG | - | chr7.3:60780376-60780395 | MS.gene070788:intron | 40.0% |
| ! | TTTGGTTTCTTCAATGCCCT+TGG | - | chr7.3:60780875-60780894 | MS.gene070788:CDS | 40.0% |
| !! | TGTAGCTTTGTGCTACTTTC+CGG | - | chr7.3:60781021-60781040 | MS.gene070788:CDS | 40.0% |
| !!! | GGTCTACTAGGATTTTTTGG+TGG | - | chr7.3:60781771-60781790 | MS.gene070788:intron | 40.0% |
| !!! | GGTGGTCTACTAGGATTTTT+TGG | - | chr7.3:60781768-60781787 | MS.gene070788:intron | 40.0% |
| AACCATCTAAGGGTCCTATG+TGG | - | chr7.3:60780972-60780991 | MS.gene070788:CDS | 45.0% | |
| AAGCAAAAGCCACATCTCCA+AGG | + | chr7.3:60780895-60780914 | None:intergenic | 45.0% | |
| ACAATCACTCCTCTCCACAT+AGG | + | chr7.3:60780989-60781008 | None:intergenic | 45.0% | |
| AGACAAGACAAAGTGAACGG+AGG | + | chr7.3:60780566-60780585 | None:intergenic | 45.0% | |
| AGCAAAAGCCACATCTCCAA+GGG | + | chr7.3:60780894-60780913 | None:intergenic | 45.0% | |
| CAAGACAAGCTGAATCTCCT+TGG | + | chr7.3:60781944-60781963 | None:intergenic | 45.0% | |
| CAAGGAGATTCAGCTTGTCT+TGG | - | chr7.3:60781942-60781961 | MS.gene070788:CDS | 45.0% | |
| CCATGTTATTGGAAGCTACC+AGG | - | chr7.3:60781153-60781172 | MS.gene070788:CDS | 45.0% | |
| CCTAGTAGACCACCGAAAAA+CGG | + | chr7.3:60781762-60781781 | None:intergenic | 45.0% | |
| CCTGGTAGCTTCCAATAACA+TGG | + | chr7.3:60781156-60781175 | None:intergenic | 45.0% | |
| GAAACCAAAGACAGTTCCTG+GGG | + | chr7.3:60780864-60780883 | None:intergenic | 45.0% | |
| GAGATGCATGAAATGGTACC+CGG | - | chr7.3:60780331-60780350 | MS.gene070788:intron | 45.0% | |
| GCAATGAACATTGTGAACGC+TGG | + | chr7.3:60781729-60781748 | None:intergenic | 45.0% | |
| GCCATTGCAATAAGCCAGTT+TGG | + | chr7.3:60781115-60781134 | None:intergenic | 45.0% | |
| GCTGGCAGATTAATGACCAT+TGG | - | chr7.3:60781463-60781482 | MS.gene070788:CDS | 45.0% | |
| GGCCAGTTACCTGCTTTAAT+TGG | - | chr7.3:60781552-60781571 | MS.gene070788:CDS | 45.0% | |
| GGCTTGCAATCTACAAACCA+AGG | - | chr7.3:60781924-60781943 | MS.gene070788:CDS | 45.0% | |
| GTTTCGTGAATTGTTCCCGA+CGG | - | chr7.3:60781439-60781458 | MS.gene070788:CDS | 45.0% | |
| TACTTTCCGGTTGCTCTCAT+TGG | - | chr7.3:60781034-60781053 | MS.gene070788:CDS | 45.0% | |
| TCTTAGTCTCCCTTATGCCA+TGG | - | chr7.3:60780030-60780049 | MS.gene070788:CDS | 45.0% | |
| ! | CGGTTGCTCTCATTGGTTAT+TGG | - | chr7.3:60781041-60781060 | MS.gene070788:CDS | 45.0% |
| ! | GATGGTTTTTCCGGTGTAGA+TGG | + | chr7.3:60780959-60780978 | None:intergenic | 45.0% |
| ! | GATGTGGCTTTTGCTTATGC+TGG | - | chr7.3:60780899-60780918 | MS.gene070788:CDS | 45.0% |
| ! | GGACCCTTAGATGGTTTTTC+CGG | + | chr7.3:60780968-60780987 | None:intergenic | 45.0% |
| ACTACCCCAGGAACTGTCTT+TGG | - | chr7.3:60780857-60780876 | MS.gene070788:CDS | 50.0% | |
| AGGTAACTGGCCGGAATACA+TGG | + | chr7.3:60781544-60781563 | None:intergenic | 50.0% | |
| ATACCATCCAAGTTGCGCCA+TGG | + | chr7.3:60780050-60780069 | None:intergenic | 50.0% | |
| ATTAATCTGCCAGCACCGTC+GGG | + | chr7.3:60781457-60781476 | None:intergenic | 50.0% | |
| CAAGTTGCGCCATGGCATAA+GGG | + | chr7.3:60780042-60780061 | None:intergenic | 50.0% | |
| CATTAATCTGCCAGCACCGT+CGG | + | chr7.3:60781458-60781477 | None:intergenic | 50.0% | |
| CTCCACATAGGACCCTTAGA+TGG | + | chr7.3:60780977-60780996 | None:intergenic | 50.0% | |
| CTTCAATGCCCTTGGAGATG+TGG | - | chr7.3:60780883-60780902 | MS.gene070788:CDS | 50.0% | |
| GGTAACTGGCCGGAATACAT+GGG | + | chr7.3:60781543-60781562 | None:intergenic | 50.0% | |
| GTAACTGGCCGGAATACATG+GGG | + | chr7.3:60781542-60781561 | None:intergenic | 50.0% | |
| TACAAAGCTACGACTACCCC+AGG | - | chr7.3:60780845-60780864 | MS.gene070788:CDS | 50.0% | |
| TCTAAGGGTCCTATGTGGAG+AGG | - | chr7.3:60780977-60780996 | MS.gene070788:CDS | 50.0% | |
| TGCTTATGCTGGACACAACG+TGG | - | chr7.3:60780910-60780929 | MS.gene070788:CDS | 50.0% | |
| TGGGCAGCTTCTGCTCATAA+AGG | - | chr7.3:60780797-60780816 | MS.gene070788:intron | 50.0% | |
| !! | CCGTTTTTCGGTGGTCTACT+AGG | - | chr7.3:60781759-60781778 | MS.gene070788:intron | 50.0% |
| !! | CCTTAACGACATGATAGCGG+CGG | + | chr7.3:60780629-60780648 | None:intergenic | 50.0% |
| ACCTGCCTCCCCATGTATTC+CGG | - | chr7.3:60781531-60781550 | MS.gene070788:CDS | 55.0% | |
| ATGCCATGGCGCAACTTGGA+TGG | - | chr7.3:60780044-60780063 | MS.gene070788:CDS | 55.0% | |
| CCAAGTTGCGCCATGGCATA+AGG | + | chr7.3:60780043-60780062 | None:intergenic | 55.0% | |
| CCGCCGCTATCATGTCGTTA+AGG | - | chr7.3:60780626-60780645 | MS.gene070788:CDS | 55.0% | |
| CCTTATGCCATGGCGCAACT+TGG | - | chr7.3:60780040-60780059 | MS.gene070788:CDS | 55.0% | |
| TGAATTGTTCCCGACGGTGC+TGG | - | chr7.3:60781445-60781464 | MS.gene070788:CDS | 55.0% | |
| ACTGGCCGGAATACATGGGG+AGG | + | chr7.3:60781539-60781558 | None:intergenic | 60.0% | |
| GCCGGAATACATGGGGAGGC+AGG | + | chr7.3:60781535-60781554 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 60780013 | 60781972 | 60780013 | ID=MS.gene070788 |
| chr7.3 | mRNA | 60780013 | 60781972 | 60780013 | ID=MS.gene070788.t1;Parent=MS.gene070788 |
| chr7.3 | exon | 60781920 | 60781972 | 60781920 | ID=MS.gene070788.t1.exon1;Parent=MS.gene070788.t1 |
| chr7.3 | CDS | 60781920 | 60781972 | 60781920 | ID=cds.MS.gene070788.t1;Parent=MS.gene070788.t1 |
| chr7.3 | exon | 60781338 | 60781721 | 60781338 | ID=MS.gene070788.t1.exon2;Parent=MS.gene070788.t1 |
| chr7.3 | CDS | 60781338 | 60781721 | 60781338 | ID=cds.MS.gene070788.t1;Parent=MS.gene070788.t1 |
| chr7.3 | exon | 60780811 | 60781204 | 60780811 | ID=MS.gene070788.t1.exon3;Parent=MS.gene070788.t1 |
| chr7.3 | CDS | 60780811 | 60781204 | 60780811 | ID=cds.MS.gene070788.t1;Parent=MS.gene070788.t1 |
| chr7.3 | exon | 60780596 | 60780701 | 60780596 | ID=MS.gene070788.t1.exon4;Parent=MS.gene070788.t1 |
| chr7.3 | CDS | 60780596 | 60780701 | 60780596 | ID=cds.MS.gene070788.t1;Parent=MS.gene070788.t1 |
| chr7.3 | exon | 60780013 | 60780077 | 60780013 | ID=MS.gene070788.t1.exon5;Parent=MS.gene070788.t1 |
| chr7.3 | CDS | 60780013 | 60780077 | 60780013 | ID=cds.MS.gene070788.t1;Parent=MS.gene070788.t1 |
| Gene Sequence |
| Protein sequence |
