Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07213.t1 | XP_003591541.1 | 96.5 | 170 | 3 | 1 | 1 | 170 | 1 | 167 | 4.50E-82 | 313.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07213.t1 | Q8L4N1 | 31.5 | 162 | 93 | 4 | 19 | 166 | 49 | 206 | 4.6e-11 | 69.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07213.t1 | G7IF74 | 96.5 | 170 | 3 | 1 | 1 | 170 | 1 | 167 | 3.2e-82 | 313.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73234 | MS.gene07213 | PPI |
| MS.gene07213 | MS.gene005525 | PPI |
| MS.gene07213 | MS.gene037687 | PPI |
| MS.gene07213 | MS.gene92557 | PPI |
| MS.gene07213 | MS.gene20798 | PPI |
| MS.gene048106 | MS.gene07213 | PPI |
| MS.gene20848 | MS.gene07213 | PPI |
| MS.gene07276 | MS.gene07213 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07213.t1 | MTR_1g088640 | 96.471 | 170 | 3 | 1 | 1 | 170 | 1 | 167 | 1.47e-117 | 329 |
| MS.gene07213.t1 | MTR_1g088640 | 94.706 | 170 | 3 | 2 | 1 | 170 | 1 | 164 | 4.31e-113 | 318 |
| MS.gene07213.t1 | MTR_7g108830 | 68.590 | 156 | 46 | 2 | 16 | 170 | 9 | 162 | 2.98e-66 | 199 |
| MS.gene07213.t1 | MTR_8g058620 | 68.590 | 156 | 46 | 2 | 16 | 170 | 9 | 162 | 2.98e-66 | 199 |
| MS.gene07213.t1 | MTR_1g088620 | 100.000 | 69 | 0 | 0 | 102 | 170 | 218 | 286 | 4.71e-42 | 142 |
| MS.gene07213.t1 | MTR_1g087200 | 40.252 | 159 | 90 | 3 | 11 | 166 | 2 | 158 | 3.59e-34 | 118 |
| MS.gene07213.t1 | MTR_1g054765 | 40.462 | 173 | 79 | 5 | 18 | 170 | 6 | 174 | 5.15e-33 | 115 |
| MS.gene07213.t1 | MTR_1g083950 | 39.752 | 161 | 89 | 4 | 10 | 168 | 5 | 159 | 1.69e-32 | 114 |
| MS.gene07213.t1 | MTR_1g054750 | 37.805 | 164 | 90 | 3 | 18 | 170 | 25 | 187 | 1.36e-30 | 110 |
| MS.gene07213.t1 | MTR_5g065980 | 32.716 | 162 | 96 | 3 | 16 | 164 | 9 | 170 | 4.36e-22 | 87.8 |
| MS.gene07213.t1 | MTR_5g065980 | 32.298 | 161 | 96 | 3 | 16 | 164 | 9 | 168 | 1.18e-21 | 86.7 |
| MS.gene07213.t1 | MTR_2g089350 | 29.560 | 159 | 99 | 4 | 19 | 167 | 29 | 184 | 1.28e-15 | 72.0 |
| MS.gene07213.t1 | MTR_4g064933 | 32.258 | 155 | 92 | 4 | 19 | 165 | 9 | 158 | 1.68e-15 | 70.5 |
| MS.gene07213.t1 | MTR_6g006190 | 24.051 | 158 | 109 | 3 | 17 | 165 | 8 | 163 | 1.53e-12 | 62.8 |
| MS.gene07213.t1 | MTR_5g077130 | 29.032 | 155 | 95 | 5 | 19 | 164 | 9 | 157 | 1.94e-12 | 62.4 |
| MS.gene07213.t1 | MTR_5g077130 | 28.846 | 156 | 95 | 5 | 19 | 164 | 9 | 158 | 2.21e-12 | 62.0 |
| MS.gene07213.t1 | MTR_2g034200 | 29.375 | 160 | 100 | 5 | 19 | 170 | 9 | 163 | 3.53e-12 | 61.6 |
| MS.gene07213.t1 | MTR_7g065770 | 29.936 | 157 | 91 | 6 | 19 | 164 | 9 | 157 | 1.41e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07213.t1 | AT2G47710 | 62.195 | 164 | 57 | 2 | 8 | 169 | 1 | 161 | 2.02e-70 | 210 |
| MS.gene07213.t1 | AT3G11930 | 40.449 | 178 | 87 | 6 | 7 | 167 | 20 | 195 | 7.28e-34 | 119 |
| MS.gene07213.t1 | AT3G11930 | 40.223 | 179 | 87 | 6 | 7 | 167 | 20 | 196 | 1.02e-33 | 118 |
| MS.gene07213.t1 | AT3G11930 | 40.000 | 180 | 87 | 6 | 7 | 167 | 20 | 197 | 1.30e-33 | 118 |
| MS.gene07213.t1 | AT1G09740 | 38.365 | 159 | 88 | 5 | 17 | 167 | 10 | 166 | 3.55e-28 | 103 |
| MS.gene07213.t1 | AT1G09740 | 38.365 | 159 | 88 | 5 | 17 | 167 | 10 | 166 | 3.55e-28 | 103 |
| MS.gene07213.t1 | AT3G11930 | 35.096 | 208 | 83 | 8 | 7 | 167 | 20 | 222 | 1.08e-27 | 103 |
| MS.gene07213.t1 | AT3G58450 | 37.349 | 166 | 83 | 5 | 17 | 167 | 32 | 191 | 4.77e-26 | 99.0 |
| MS.gene07213.t1 | AT3G62550 | 36.905 | 168 | 85 | 8 | 7 | 165 | 2 | 157 | 1.32e-25 | 96.7 |
| MS.gene07213.t1 | AT3G58450 | 36.145 | 166 | 78 | 6 | 17 | 167 | 32 | 184 | 4.74e-25 | 95.9 |
| MS.gene07213.t1 | AT5G49050 | 42.735 | 117 | 62 | 2 | 13 | 127 | 37 | 150 | 2.24e-24 | 93.2 |
| MS.gene07213.t1 | AT1G11360 | 32.571 | 175 | 94 | 6 | 10 | 169 | 33 | 198 | 9.02e-19 | 80.5 |
| MS.gene07213.t1 | AT1G11360 | 32.571 | 175 | 94 | 6 | 10 | 169 | 33 | 198 | 9.02e-19 | 80.5 |
| MS.gene07213.t1 | AT1G11360 | 32.571 | 175 | 94 | 6 | 10 | 169 | 33 | 198 | 9.02e-19 | 80.5 |
| MS.gene07213.t1 | AT1G11360 | 32.571 | 175 | 94 | 6 | 10 | 169 | 33 | 198 | 9.02e-19 | 80.5 |
| MS.gene07213.t1 | AT1G68300 | 32.278 | 158 | 100 | 4 | 11 | 164 | 3 | 157 | 2.68e-18 | 77.4 |
| MS.gene07213.t1 | AT5G14680 | 27.647 | 170 | 99 | 5 | 12 | 165 | 2 | 163 | 3.66e-16 | 72.4 |
| MS.gene07213.t1 | AT3G01520 | 28.676 | 136 | 95 | 2 | 30 | 165 | 30 | 163 | 7.10e-15 | 68.9 |
| MS.gene07213.t1 | AT3G17020 | 28.477 | 151 | 102 | 2 | 19 | 164 | 11 | 160 | 8.33e-13 | 63.2 |
| MS.gene07213.t1 | AT3G53990 | 25.325 | 154 | 102 | 4 | 19 | 164 | 9 | 157 | 2.76e-12 | 61.6 |
| MS.gene07213.t1 | AT2G21620 | 29.932 | 147 | 80 | 4 | 17 | 163 | 42 | 165 | 2.55e-11 | 59.7 |
| MS.gene07213.t1 | AT2G21620 | 30.612 | 147 | 85 | 4 | 17 | 163 | 42 | 171 | 2.61e-11 | 59.7 |
Find 26 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAGGTAGTCACGGTTAT+GGG | 0.301582 | 1.4:-70349961 | MS.gene07213:CDS |
| TCGATTGCAACTAACATTAC+TGG | 0.334213 | 1.4:+70351165 | None:intergenic |
| GTTGTAGGTAGTCACGGTTA+TGG | 0.361010 | 1.4:-70349962 | MS.gene07213:CDS |
| CGTGCTTCAATCTTGGTTGT+AGG | 0.387207 | 1.4:-70349977 | MS.gene07213:CDS |
| AAAGTATCGTGCTTCAATCT+TGG | 0.402940 | 1.4:-70349984 | MS.gene07213:CDS |
| ACTTCTTCTGTTGGCCTCGC+TGG | 0.403590 | 1.4:-70351036 | MS.gene07213:CDS |
| ACAGTGCATACGCTCTGAAA+TGG | 0.408844 | 1.4:-70351131 | MS.gene07213:CDS |
| TCTGTTGGCCTCGCTGGTCC+TGG | 0.423133 | 1.4:-70351030 | MS.gene07213:intron |
| ACGGTTATGGGGCTATAAAA+AGG | 0.451906 | 1.4:-70349949 | MS.gene07213:intron |
| CTCAAATCAGAGTCCACAAT+TGG | 0.452134 | 1.4:+70350896 | None:intergenic |
| CCCGCCGCTACTTCTTCTGT+TGG | 0.478264 | 1.4:-70351045 | MS.gene07213:CDS |
| TTGTGCTAATTAGTGTATGC+AGG | 0.499655 | 1.4:-70350935 | MS.gene07213:intron |
| CAATTGTGGACTCTGATTTG+AGG | 0.500278 | 1.4:-70350895 | MS.gene07213:CDS |
| TCAGGTAAATGATGTAATAG+TGG | 0.511125 | 1.4:-70350053 | MS.gene07213:intron |
| ATCTTGGTTGTAGGTAGTCA+CGG | 0.516671 | 1.4:-70349968 | MS.gene07213:CDS |
| TGCCAGTATAGATCAGTGCT+TGG | 0.553700 | 1.4:+70349377 | None:intergenic |
| TGATGTAATAGTGGAGGTGG+TGG | 0.556420 | 1.4:-70350044 | MS.gene07213:CDS |
| AAATGATGTAATAGTGGAGG+TGG | 0.562868 | 1.4:-70350047 | MS.gene07213:CDS |
| AGTGTATGCAGGAGCTGCTG+AGG | 0.582958 | 1.4:-70350924 | MS.gene07213:CDS |
| TGTAGGTAGTCACGGTTATG+GGG | 0.599167 | 1.4:-70349960 | MS.gene07213:CDS |
| GCCAACAGAAGAAGTAGCGG+CGG | 0.613641 | 1.4:+70351044 | None:intergenic |
| GAGGCCAACAGAAGAAGTAG+CGG | 0.621681 | 1.4:+70351041 | None:intergenic |
| CCAACAGAAGAAGTAGCGGC+GGG | 0.624059 | 1.4:+70351045 | None:intergenic |
| GTAATAGTGGAGGTGGTGGA+AGG | 0.626493 | 1.4:-70350040 | MS.gene07213:CDS |
| GGTAAATGATGTAATAGTGG+AGG | 0.637317 | 1.4:-70350050 | MS.gene07213:CDS |
| GAATTATACCAGGACCAGCG+AGG | 0.726201 | 1.4:+70351022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTATGAAAAGAATT+AGG | + | chr1.4:70349969-70349988 | None:intergenic | 10.0% |
| !! | TAAAATTATGAAAAGAATTA+GGG | + | chr1.4:70349968-70349987 | None:intergenic | 10.0% |
| !!! | ATGATATTATTTTAGATAAT+AGG | - | chr1.4:70350101-70350120 | MS.gene07213:intron | 10.0% |
| !!! | TTTCATAATTTTATTTGATA+AGG | - | chr1.4:70349975-70349994 | MS.gene07213:CDS | 10.0% |
| !!! | ACTTTTCATTTTATTTATAC+TGG | - | chr1.4:70351026-70351045 | MS.gene07213:intron | 15.0% |
| !!! | ATTACATTTATTCATGTTTT+TGG | + | chr1.4:70350855-70350874 | None:intergenic | 15.0% |
| !!! | ATTTTATTTGATAAGGAAAA+TGG | - | chr1.4:70349982-70350001 | MS.gene07213:CDS | 15.0% |
| !!! | CTTTTCATTTTATTTATACT+GGG | - | chr1.4:70351027-70351046 | MS.gene07213:intron | 15.0% |
| !!! | TTTTCATTTTATTTATACTG+GGG | - | chr1.4:70351028-70351047 | MS.gene07213:intron | 15.0% |
| !! | AACAAAAATAGAAACACATA+CGG | + | chr1.4:70349779-70349798 | None:intergenic | 20.0% |
| !!! | AAAATTTTAAACAACAGTCA+AGG | - | chr1.4:70349815-70349834 | MS.gene07213:intron | 20.0% |
| !!! | TAATGTATACATTTTTCCTT+AGG | + | chr1.4:70350468-70350487 | None:intergenic | 20.0% |
| !!! | TTTCATTTTATTTATACTGG+GGG | - | chr1.4:70351029-70351048 | MS.gene07213:intron | 20.0% |
| !!! | TTTGTTGATGTTTTGATAAT+TGG | - | chr1.4:70349629-70349648 | MS.gene07213:intron | 20.0% |
| !!! | TTTTTTGTTAGTTTGATGAA+AGG | - | chr1.4:70350213-70350232 | MS.gene07213:intron | 20.0% |
| ! | ATGAAATTGAGAATTATACC+AGG | + | chr1.4:70349587-70349606 | None:intergenic | 25.0% |
| ! | CAAATAACTTAGAAAGCAAA+AGG | + | chr1.4:70351006-70351025 | None:intergenic | 25.0% |
| ! | TTAAGTACTTATGTCATATG+TGG | - | chr1.4:70350494-70350513 | MS.gene07213:intron | 25.0% |
| !!! | TGAATTTTCTCTGGTTTATA+CGG | - | chr1.4:70350017-70350036 | MS.gene07213:CDS | 25.0% |
| !!! | TTAATACACACAAGTTTTGT+TGG | + | chr1.4:70350413-70350432 | None:intergenic | 25.0% |
| AATTAAATGCCGCATATTCA+TGG | + | chr1.4:70350777-70350796 | None:intergenic | 30.0% | |
| CCTGTATTTATATGTTGTGT+GGG | - | chr1.4:70350041-70350060 | MS.gene07213:CDS | 30.0% | |
| TAACTTAGAAAGCAAAAGGA+AGG | + | chr1.4:70351002-70351021 | None:intergenic | 30.0% | |
| TAATCTTGTGTTTGTAATCG+TGG | + | chr1.4:70350827-70350846 | None:intergenic | 30.0% | |
| TACAATTATCATCCTTCGTT+TGG | - | chr1.4:70350687-70350706 | MS.gene07213:intron | 30.0% | |
| TAGGATATACCATGAATATG+CGG | - | chr1.4:70350765-70350784 | MS.gene07213:intron | 30.0% | |
| TCAGGTAAATGATGTAATAG+TGG | - | chr1.4:70350543-70350562 | MS.gene07213:intron | 30.0% | |
| TCCTGTATTTATATGTTGTG+TGG | - | chr1.4:70350040-70350059 | MS.gene07213:CDS | 30.0% | |
| TTACCATCATCTTTGTATGT+CGG | - | chr1.4:70350326-70350345 | MS.gene07213:intron | 30.0% | |
| TTCACTTAAATTGCTTCAAC+TGG | - | chr1.4:70350292-70350311 | MS.gene07213:intron | 30.0% | |
| TTCGGTTGTTACAAATGTTA+TGG | - | chr1.4:70349846-70349865 | MS.gene07213:intron | 30.0% | |
| ! | TAAGGAAAATGGCTTTTGAA+TGG | - | chr1.4:70349993-70350012 | MS.gene07213:CDS | 30.0% |
| ! | TCTGATAACTGAATTTTCTC+AGG | - | chr1.4:70350525-70350544 | MS.gene07213:intron | 30.0% |
| ! | TTGAATGGATGAATTTTCTC+TGG | - | chr1.4:70350008-70350027 | MS.gene07213:CDS | 30.0% |
| ! | TTTGTTAGTTTGATGAAAGG+AGG | - | chr1.4:70350216-70350235 | MS.gene07213:intron | 30.0% |
| !!! | CTTTTCTGAAACTTGTGAAT+AGG | - | chr1.4:70350746-70350765 | MS.gene07213:intron | 30.0% |
| AACTAATAGGGATATGGGTA+TGG | + | chr1.4:70350386-70350405 | None:intergenic | 35.0% | |
| ACCCATATCCCTATTAGTTA+GGG | - | chr1.4:70350387-70350406 | MS.gene07213:intron | 35.0% | |
| AGGTTAAAGATTTCAGTGGA+TGG | + | chr1.4:70350881-70350900 | None:intergenic | 35.0% | |
| ATCTTTAACCTGCAGAAGAT+AGG | - | chr1.4:70350890-70350909 | MS.gene07213:CDS | 35.0% | |
| CAAAAGGAAGGTTTGATTGA+TGG | + | chr1.4:70350990-70351009 | None:intergenic | 35.0% | |
| CCCACACAACATATAAATAC+AGG | + | chr1.4:70350044-70350063 | None:intergenic | 35.0% | |
| GATGAAAGGAGGTAAATTGA+AGG | - | chr1.4:70350227-70350246 | MS.gene07213:intron | 35.0% | |
| GGTAAATGATGTAATAGTGG+AGG | - | chr1.4:70350546-70350565 | MS.gene07213:intron | 35.0% | |
| TAACCGACATACAAAGATGA+TGG | + | chr1.4:70350332-70350351 | None:intergenic | 35.0% | |
| TACCCATATCCCTATTAGTT+AGG | - | chr1.4:70350386-70350405 | MS.gene07213:intron | 35.0% | |
| TATGGGGCTATAAAAAGGTA+TGG | - | chr1.4:70350652-70350671 | MS.gene07213:intron | 35.0% | |
| TCGATTGCAACTAACATTAC+TGG | + | chr1.4:70349434-70349453 | None:intergenic | 35.0% | |
| TTACATATCACTCCAAACGA+AGG | + | chr1.4:70350702-70350721 | None:intergenic | 35.0% | |
| TTGTGCTAATTAGTGTATGC+AGG | - | chr1.4:70349661-70349680 | MS.gene07213:intron | 35.0% | |
| TTTATATGTTGTGTGGGACT+TGG | - | chr1.4:70350047-70350066 | MS.gene07213:CDS | 35.0% | |
| TTTGTTGGCCCTAACTAATA+GGG | + | chr1.4:70350398-70350417 | None:intergenic | 35.0% | |
| ! | AAAAAGGTATGGCTTCATTG+TGG | - | chr1.4:70350663-70350682 | MS.gene07213:intron | 35.0% |
| ! | AAATGATGTAATAGTGGAGG+TGG | - | chr1.4:70350549-70350568 | MS.gene07213:intron | 35.0% |
| ! | TCGGTTAATTGTCATGCTTT+TGG | - | chr1.4:70350345-70350364 | MS.gene07213:intron | 35.0% |
| ! | TTTTGTTGGCCCTAACTAAT+AGG | + | chr1.4:70350399-70350418 | None:intergenic | 35.0% |
| ! | TTTTTCTACTTTCGAGCCTA+AGG | - | chr1.4:70350449-70350468 | MS.gene07213:intron | 35.0% |
| !! | AAAGTATCGTGCTTCAATCT+TGG | - | chr1.4:70350612-70350631 | MS.gene07213:intron | 35.0% |
| ACGGTTATGGGGCTATAAAA+AGG | - | chr1.4:70350647-70350666 | MS.gene07213:intron | 40.0% | |
| ATCTTGGTTGTAGGTAGTCA+CGG | - | chr1.4:70350628-70350647 | MS.gene07213:intron | 40.0% | |
| CTCAAATCAGAGTCCACAAT+TGG | + | chr1.4:70349703-70349722 | None:intergenic | 40.0% | |
| CTGCAGGTTAAAGATTTCAG+TGG | + | chr1.4:70350885-70350904 | None:intergenic | 40.0% | |
| GCCCTAACTAATAGGGATAT+GGG | + | chr1.4:70350391-70350410 | None:intergenic | 40.0% | |
| TCGAGTGTAGTGAGTGAATT+AGG | + | chr1.4:70351106-70351125 | None:intergenic | 40.0% | |
| TCTTGTGTTTGTAATCGTGG+TGG | + | chr1.4:70350824-70350843 | None:intergenic | 40.0% | |
| TTGTAGGTAGTCACGGTTAT+GGG | - | chr1.4:70350635-70350654 | MS.gene07213:intron | 40.0% | |
| ! | ACTCGACTCTTTTAATCTGC+AGG | - | chr1.4:70351120-70351139 | MS.gene07213:CDS | 40.0% |
| ! | CAATTGTGGACTCTGATTTG+AGG | - | chr1.4:70349701-70349720 | MS.gene07213:intron | 40.0% |
| ! | CTCGACTCTTTTAATCTGCA+GGG | - | chr1.4:70351121-70351140 | MS.gene07213:CDS | 40.0% |
| ACAGTCAAGGTGTGCGATTT+CGG | - | chr1.4:70349828-70349847 | MS.gene07213:intron | 45.0% | |
| CGTGCTTCAATCTTGGTTGT+AGG | - | chr1.4:70350619-70350638 | MS.gene07213:intron | 45.0% | |
| GGCCCTAACTAATAGGGATA+TGG | + | chr1.4:70350392-70350411 | None:intergenic | 45.0% | |
| GGGACTTGGAGCATACTATA+TGG | - | chr1.4:70350061-70350080 | MS.gene07213:intron | 45.0% | |
| GTTGTAGGTAGTCACGGTTA+TGG | - | chr1.4:70350634-70350653 | MS.gene07213:intron | 45.0% | |
| TAGCTGAATGCATCATGCTC+AGG | - | chr1.4:70350138-70350157 | MS.gene07213:intron | 45.0% | |
| TGTAGGTAGTCACGGTTATG+GGG | - | chr1.4:70350636-70350655 | MS.gene07213:intron | 45.0% | |
| ! | GACTCTTTTAATCTGCAGGG+CGG | - | chr1.4:70351124-70351143 | MS.gene07213:CDS | 45.0% |
| ! | TGATGTAATAGTGGAGGTGG+TGG | - | chr1.4:70350552-70350571 | MS.gene07213:intron | 45.0% |
| ! | TGCTGAGGTTTTGCCAATTG+TGG | - | chr1.4:70349687-70349706 | MS.gene07213:intron | 45.0% |
| ! | TTAATCTGCAGGGCGGTTTT+AGG | - | chr1.4:70351131-70351150 | MS.gene07213:CDS | 45.0% |
| !! | ACAGTGCATACGCTCTGAAA+TGG | - | chr1.4:70349465-70349484 | MS.gene07213:intron | 45.0% |
| GAATTATACCAGGACCAGCG+AGG | + | chr1.4:70349577-70349596 | None:intergenic | 50.0% | |
| GAGGCCAACAGAAGAAGTAG+CGG | + | chr1.4:70349558-70349577 | None:intergenic | 50.0% | |
| TACTGCTGCCTATCTTCTGC+AGG | + | chr1.4:70350901-70350920 | None:intergenic | 50.0% | |
| !! | GTAATAGTGGAGGTGGTGGA+AGG | - | chr1.4:70350556-70350575 | MS.gene07213:intron | 50.0% |
| AGTGTATGCAGGAGCTGCTG+AGG | - | chr1.4:70349672-70349691 | MS.gene07213:intron | 55.0% | |
| CCAACAGAAGAAGTAGCGGC+GGG | + | chr1.4:70349554-70349573 | None:intergenic | 55.0% | |
| GCCAACAGAAGAAGTAGCGG+CGG | + | chr1.4:70349555-70349574 | None:intergenic | 55.0% | |
| ! | ACTTCTTCTGTTGGCCTCGC+TGG | - | chr1.4:70349560-70349579 | MS.gene07213:intron | 55.0% |
| CCCGCCGCTACTTCTTCTGT+TGG | - | chr1.4:70349551-70349570 | MS.gene07213:intron | 60.0% | |
| ! | TCTGTTGGCCTCGCTGGTCC+TGG | - | chr1.4:70349566-70349585 | MS.gene07213:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 70349389 | 70351229 | 70349389 | ID=MS.gene07213 |
| chr1.4 | mRNA | 70349389 | 70351229 | 70349389 | ID=MS.gene07213.t1;Parent=MS.gene07213 |
| chr1.4 | exon | 70351031 | 70351229 | 70351031 | ID=MS.gene07213.t1.exon1;Parent=MS.gene07213.t1 |
| chr1.4 | CDS | 70351031 | 70351229 | 70351031 | ID=cds.MS.gene07213.t1;Parent=MS.gene07213.t1 |
| chr1.4 | exon | 70350841 | 70350944 | 70350841 | ID=MS.gene07213.t1.exon2;Parent=MS.gene07213.t1 |
| chr1.4 | CDS | 70350841 | 70350944 | 70350841 | ID=cds.MS.gene07213.t1;Parent=MS.gene07213.t1 |
| chr1.4 | exon | 70349950 | 70350071 | 70349950 | ID=MS.gene07213.t1.exon3;Parent=MS.gene07213.t1 |
| chr1.4 | CDS | 70349950 | 70350071 | 70349950 | ID=cds.MS.gene07213.t1;Parent=MS.gene07213.t1 |
| chr1.4 | exon | 70349389 | 70349476 | 70349389 | ID=MS.gene07213.t1.exon4;Parent=MS.gene07213.t1 |
| chr1.4 | CDS | 70349389 | 70349476 | 70349389 | ID=cds.MS.gene07213.t1;Parent=MS.gene07213.t1 |
| Gene Sequence |
| Protein sequence |
