Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072697.t1 | XP_003625972.1 | 96.1 | 305 | 7 | 1 | 1 | 305 | 108 | 407 | 1.40E-174 | 622.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072697.t1 | Q9LZQ1 | 67.1 | 301 | 94 | 2 | 4 | 304 | 112 | 407 | 1.4e-125 | 450.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072697.t1 | G7KST9 | 96.1 | 305 | 7 | 1 | 1 | 305 | 108 | 407 | 1.0e-174 | 622.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050071 | MS.gene072697 | 0.825718 | 4.02E-54 | -1.69E-46 |
MS.gene050170 | MS.gene072697 | -0.810444 | 1.15E-50 | -1.69E-46 |
MS.gene055251 | MS.gene072697 | 0.875873 | 2.19E-68 | -1.69E-46 |
MS.gene055331 | MS.gene072697 | 0.819546 | 1.10E-52 | -1.69E-46 |
MS.gene05589 | MS.gene072697 | -0.805454 | 1.32E-49 | -1.69E-46 |
MS.gene056266 | MS.gene072697 | -0.831582 | 1.54E-55 | -1.69E-46 |
MS.gene060076 | MS.gene072697 | 0.801583 | 8.41E-49 | -1.69E-46 |
MS.gene06042 | MS.gene072697 | 0.836668 | 8.18E-57 | -1.69E-46 |
MS.gene061044 | MS.gene072697 | 0.844023 | 9.77E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072697.t1 | MTR_7g109550 | 96.066 | 305 | 7 | 1 | 1 | 305 | 108 | 407 | 0.0 | 621 |
MS.gene072697.t1 | MTR_8g069790 | 46.945 | 311 | 156 | 3 | 2 | 303 | 137 | 447 | 2.68e-98 | 300 |
MS.gene072697.t1 | MTR_4g126950 | 49.638 | 276 | 137 | 2 | 32 | 305 | 106 | 381 | 1.36e-97 | 295 |
MS.gene072697.t1 | MTR_5g059400 | 50.588 | 255 | 123 | 2 | 35 | 287 | 175 | 428 | 2.49e-96 | 295 |
MS.gene072697.t1 | MTR_1g116130 | 50.588 | 255 | 123 | 2 | 35 | 287 | 175 | 428 | 2.49e-96 | 295 |
MS.gene072697.t1 | MTR_5g033800 | 48.689 | 267 | 137 | 0 | 20 | 286 | 130 | 396 | 9.80e-96 | 292 |
MS.gene072697.t1 | MTR_0136s0010 | 48.936 | 282 | 142 | 2 | 25 | 304 | 160 | 441 | 2.70e-94 | 289 |
MS.gene072697.t1 | MTR_7g093450 | 48.944 | 284 | 141 | 3 | 24 | 304 | 237 | 519 | 1.49e-93 | 290 |
MS.gene072697.t1 | MTR_7g094750 | 52.362 | 254 | 119 | 1 | 35 | 286 | 91 | 344 | 6.16e-91 | 278 |
MS.gene072697.t1 | MTR_2g022560 | 49.438 | 267 | 131 | 2 | 35 | 299 | 97 | 361 | 2.57e-90 | 277 |
MS.gene072697.t1 | MTR_4g121560 | 46.570 | 277 | 144 | 3 | 32 | 304 | 111 | 387 | 3.57e-88 | 271 |
MS.gene072697.t1 | MTR_5g033800 | 47.809 | 251 | 131 | 0 | 20 | 270 | 130 | 380 | 4.85e-88 | 268 |
MS.gene072697.t1 | MTR_7g094750 | 52.101 | 238 | 112 | 1 | 35 | 270 | 91 | 328 | 1.13e-83 | 256 |
MS.gene072697.t1 | MTR_1g058380 | 44.106 | 263 | 141 | 4 | 32 | 289 | 52 | 313 | 5.79e-79 | 246 |
MS.gene072697.t1 | MTR_3g090120 | 43.726 | 263 | 139 | 4 | 35 | 291 | 129 | 388 | 3.91e-76 | 241 |
MS.gene072697.t1 | MTR_8g093530 | 41.909 | 241 | 138 | 1 | 30 | 268 | 85 | 325 | 2.16e-70 | 225 |
MS.gene072697.t1 | MTR_5g071350 | 39.841 | 251 | 139 | 5 | 35 | 284 | 58 | 297 | 7.65e-63 | 204 |
MS.gene072697.t1 | MTR_1g112210 | 38.017 | 242 | 139 | 3 | 33 | 274 | 57 | 287 | 1.67e-62 | 203 |
MS.gene072697.t1 | MTR_2g091175 | 39.615 | 260 | 144 | 5 | 29 | 287 | 44 | 291 | 5.47e-62 | 201 |
MS.gene072697.t1 | MTR_1g050448 | 35.531 | 273 | 158 | 6 | 33 | 303 | 51 | 307 | 2.95e-61 | 199 |
MS.gene072697.t1 | MTR_3g464570 | 35.971 | 278 | 158 | 6 | 35 | 303 | 43 | 309 | 5.17e-61 | 199 |
MS.gene072697.t1 | MTR_4g016940 | 37.692 | 260 | 149 | 5 | 33 | 286 | 84 | 336 | 5.74e-60 | 197 |
MS.gene072697.t1 | MTR_4g079700 | 35.612 | 278 | 155 | 5 | 1 | 275 | 19 | 275 | 2.25e-59 | 194 |
MS.gene072697.t1 | MTR_1g112210 | 38.017 | 242 | 126 | 4 | 33 | 274 | 57 | 274 | 4.74e-59 | 194 |
MS.gene072697.t1 | MTR_5g034810 | 36.170 | 282 | 161 | 7 | 33 | 310 | 33 | 299 | 4.93e-59 | 193 |
MS.gene072697.t1 | MTR_3g021060 | 37.548 | 261 | 147 | 7 | 33 | 290 | 44 | 291 | 5.82e-59 | 193 |
MS.gene072697.t1 | MTR_2g073510 | 39.552 | 268 | 142 | 8 | 33 | 296 | 31 | 282 | 1.47e-58 | 192 |
MS.gene072697.t1 | MTR_2g015720 | 35.036 | 274 | 162 | 6 | 31 | 301 | 38 | 298 | 2.92e-57 | 189 |
MS.gene072697.t1 | MTR_3g049330 | 37.358 | 265 | 147 | 7 | 35 | 296 | 31 | 279 | 9.27e-57 | 187 |
MS.gene072697.t1 | MTR_4g014440 | 36.364 | 264 | 156 | 5 | 23 | 280 | 50 | 307 | 1.09e-55 | 186 |
MS.gene072697.t1 | MTR_3g021090 | 32.384 | 281 | 175 | 5 | 33 | 310 | 29 | 297 | 7.76e-55 | 184 |
MS.gene072697.t1 | MTR_4g087730 | 34.818 | 247 | 149 | 3 | 29 | 275 | 39 | 273 | 1.00e-54 | 182 |
MS.gene072697.t1 | MTR_7g070060 | 37.500 | 256 | 150 | 5 | 34 | 284 | 63 | 313 | 1.39e-54 | 183 |
MS.gene072697.t1 | MTR_2g073500 | 37.052 | 251 | 134 | 6 | 31 | 271 | 25 | 261 | 1.44e-54 | 181 |
MS.gene072697.t1 | MTR_3g070900 | 35.496 | 262 | 154 | 6 | 33 | 287 | 104 | 357 | 2.80e-54 | 183 |
MS.gene072697.t1 | MTR_3g035830 | 31.673 | 281 | 177 | 5 | 33 | 310 | 29 | 297 | 2.90e-54 | 181 |
MS.gene072697.t1 | MTR_7g070060 | 38.333 | 240 | 140 | 4 | 34 | 270 | 63 | 297 | 8.06e-54 | 178 |
MS.gene072697.t1 | MTR_1g111010 | 37.132 | 272 | 147 | 9 | 33 | 301 | 30 | 280 | 1.94e-53 | 179 |
MS.gene072697.t1 | MTR_7g068920 | 34.615 | 260 | 157 | 5 | 33 | 286 | 78 | 330 | 5.51e-53 | 179 |
MS.gene072697.t1 | MTR_4g088030 | 34.286 | 280 | 168 | 7 | 35 | 313 | 33 | 297 | 5.73e-53 | 177 |
MS.gene072697.t1 | MTR_5g082880 | 38.113 | 265 | 144 | 8 | 33 | 286 | 163 | 418 | 2.64e-52 | 180 |
MS.gene072697.t1 | MTR_8g463790 | 33.579 | 271 | 151 | 8 | 30 | 288 | 66 | 319 | 8.86e-50 | 171 |
MS.gene072697.t1 | MTR_3g071650 | 36.742 | 264 | 148 | 7 | 35 | 289 | 89 | 342 | 5.66e-49 | 169 |
MS.gene072697.t1 | MTR_4g014430 | 36.015 | 261 | 153 | 5 | 33 | 288 | 106 | 357 | 6.99e-49 | 169 |
MS.gene072697.t1 | MTR_5g083260 | 34.572 | 269 | 163 | 5 | 28 | 290 | 76 | 337 | 9.20e-49 | 168 |
MS.gene072697.t1 | MTR_6g061710 | 33.456 | 272 | 149 | 10 | 31 | 287 | 163 | 417 | 2.03e-41 | 150 |
MS.gene072697.t1 | MTR_2g022580 | 50.400 | 125 | 60 | 1 | 95 | 217 | 2 | 126 | 2.94e-37 | 129 |
MS.gene072697.t1 | MTR_1g076690 | 31.618 | 272 | 146 | 9 | 35 | 287 | 223 | 473 | 5.51e-37 | 139 |
MS.gene072697.t1 | MTR_3g464570 | 33.645 | 214 | 122 | 6 | 99 | 303 | 3 | 205 | 8.41e-37 | 133 |
MS.gene072697.t1 | MTR_2g016060 | 32.566 | 304 | 180 | 12 | 28 | 318 | 47 | 338 | 3.89e-35 | 132 |
MS.gene072697.t1 | MTR_6g016880 | 33.088 | 272 | 149 | 9 | 32 | 287 | 75 | 329 | 5.04e-34 | 129 |
MS.gene072697.t1 | MTR_8g027900 | 32.234 | 273 | 161 | 9 | 28 | 289 | 204 | 463 | 7.55e-34 | 130 |
MS.gene072697.t1 | MTR_5g035150 | 31.852 | 270 | 153 | 12 | 33 | 287 | 83 | 336 | 2.04e-32 | 125 |
MS.gene072697.t1 | MTR_6g016240 | 29.123 | 285 | 172 | 9 | 35 | 299 | 71 | 345 | 4.74e-32 | 124 |
MS.gene072697.t1 | MTR_7g019120 | 30.403 | 273 | 163 | 9 | 32 | 290 | 76 | 335 | 6.66e-32 | 123 |
MS.gene072697.t1 | MTR_7g070060 | 35.149 | 202 | 122 | 4 | 87 | 284 | 15 | 211 | 9.53e-32 | 120 |
MS.gene072697.t1 | MTR_3g109840 | 30.612 | 294 | 164 | 12 | 35 | 308 | 73 | 346 | 2.80e-31 | 121 |
MS.gene072697.t1 | MTR_5g035080 | 30.418 | 263 | 152 | 8 | 35 | 282 | 75 | 321 | 6.38e-31 | 120 |
MS.gene072697.t1 | MTR_8g104970 | 29.934 | 304 | 178 | 11 | 24 | 308 | 109 | 396 | 9.76e-31 | 120 |
MS.gene072697.t1 | MTR_4g092830 | 28.958 | 259 | 161 | 7 | 35 | 280 | 48 | 296 | 1.95e-30 | 119 |
MS.gene072697.t1 | MTR_6g007777 | 30.435 | 276 | 156 | 12 | 33 | 289 | 114 | 372 | 4.35e-30 | 119 |
MS.gene072697.t1 | MTR_6g016875 | 32.222 | 270 | 152 | 9 | 29 | 281 | 58 | 313 | 6.15e-30 | 118 |
MS.gene072697.t1 | MTR_8g099300 | 30.112 | 269 | 161 | 9 | 34 | 289 | 73 | 327 | 7.64e-30 | 117 |
MS.gene072697.t1 | MTR_5g035090 | 29.434 | 265 | 162 | 10 | 34 | 287 | 82 | 332 | 9.70e-30 | 117 |
MS.gene072697.t1 | MTR_4g125060 | 27.027 | 296 | 184 | 8 | 33 | 310 | 130 | 411 | 1.68e-29 | 117 |
MS.gene072697.t1 | MTR_4g125060 | 27.027 | 296 | 184 | 8 | 33 | 310 | 198 | 479 | 3.21e-29 | 117 |
MS.gene072697.t1 | MTR_7g033230 | 28.571 | 273 | 157 | 9 | 29 | 282 | 258 | 511 | 3.60e-29 | 117 |
MS.gene072697.t1 | MTR_4g125060 | 27.027 | 296 | 184 | 8 | 33 | 310 | 169 | 450 | 4.40e-29 | 116 |
MS.gene072697.t1 | MTR_7g033230 | 28.571 | 273 | 157 | 9 | 29 | 282 | 328 | 581 | 5.23e-29 | 117 |
MS.gene072697.t1 | MTR_8g093870 | 28.409 | 264 | 165 | 7 | 35 | 280 | 133 | 390 | 6.49e-29 | 115 |
MS.gene072697.t1 | MTR_5g035070 | 30.682 | 264 | 160 | 9 | 35 | 287 | 87 | 338 | 6.65e-26 | 107 |
MS.gene072697.t1 | MTR_7g019140 | 43.478 | 92 | 52 | 0 | 32 | 123 | 76 | 167 | 4.64e-24 | 96.7 |
MS.gene072697.t1 | MTR_5g035120 | 44.792 | 96 | 53 | 0 | 33 | 128 | 73 | 168 | 3.11e-22 | 92.0 |
MS.gene072697.t1 | MTR_5g069320 | 28.571 | 189 | 89 | 5 | 90 | 277 | 156 | 299 | 9.30e-19 | 86.3 |
MS.gene072697.t1 | MTR_7g029590 | 41.176 | 102 | 45 | 2 | 188 | 278 | 2 | 99 | 1.26e-16 | 78.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072697.t1 | AT3G62390 | 66.667 | 303 | 96 | 2 | 3 | 305 | 111 | 408 | 3.33e-156 | 446 |
MS.gene072697.t1 | AT3G62390 | 67.754 | 276 | 84 | 2 | 3 | 278 | 111 | 381 | 1.41e-142 | 409 |
MS.gene072697.t1 | AT3G12060 | 51.748 | 286 | 131 | 4 | 24 | 303 | 182 | 466 | 7.67e-102 | 310 |
MS.gene072697.t1 | AT1G60790 | 51.636 | 275 | 129 | 3 | 33 | 303 | 188 | 462 | 1.34e-99 | 303 |
MS.gene072697.t1 | AT5G06700 | 51.087 | 276 | 131 | 3 | 32 | 304 | 252 | 526 | 3.52e-97 | 299 |
MS.gene072697.t1 | AT5G20590 | 48.375 | 277 | 140 | 3 | 32 | 305 | 138 | 414 | 6.82e-97 | 295 |
MS.gene072697.t1 | AT5G19160 | 53.543 | 254 | 116 | 1 | 35 | 286 | 99 | 352 | 8.06e-95 | 289 |
MS.gene072697.t1 | AT3G06080 | 51.969 | 254 | 120 | 1 | 35 | 286 | 103 | 356 | 4.90e-92 | 282 |
MS.gene072697.t1 | AT5G49340 | 48.201 | 278 | 140 | 4 | 30 | 303 | 95 | 372 | 1.55e-90 | 278 |
MS.gene072697.t1 | AT5G19160 | 53.782 | 238 | 108 | 1 | 35 | 270 | 99 | 336 | 3.44e-89 | 270 |
MS.gene072697.t1 | AT5G20590 | 50.207 | 241 | 118 | 2 | 32 | 270 | 138 | 378 | 1.16e-88 | 270 |
MS.gene072697.t1 | AT3G06080 | 52.101 | 238 | 112 | 1 | 35 | 270 | 103 | 340 | 8.09e-86 | 262 |
MS.gene072697.t1 | AT5G06230 | 43.233 | 266 | 143 | 2 | 29 | 286 | 15 | 280 | 5.82e-75 | 235 |
MS.gene072697.t1 | AT5G06230 | 43.233 | 266 | 143 | 2 | 29 | 286 | 56 | 321 | 1.85e-74 | 235 |
MS.gene072697.t1 | AT3G11570 | 46.218 | 238 | 126 | 1 | 51 | 286 | 98 | 335 | 3.63e-72 | 229 |
MS.gene072697.t1 | AT1G48880 | 40.154 | 259 | 148 | 2 | 34 | 290 | 114 | 367 | 4.10e-70 | 224 |
MS.gene072697.t1 | AT5G06230 | 42.913 | 254 | 137 | 2 | 29 | 274 | 56 | 309 | 2.86e-69 | 218 |
MS.gene072697.t1 | AT1G29050 | 40.249 | 241 | 133 | 2 | 35 | 275 | 61 | 290 | 9.95e-63 | 204 |
MS.gene072697.t1 | AT3G54260 | 36.641 | 262 | 148 | 4 | 35 | 296 | 51 | 294 | 7.66e-61 | 199 |
MS.gene072697.t1 | AT2G34070 | 36.996 | 273 | 155 | 4 | 4 | 275 | 39 | 295 | 1.33e-60 | 198 |
MS.gene072697.t1 | AT2G42570 | 37.008 | 254 | 147 | 4 | 35 | 287 | 47 | 288 | 2.20e-60 | 197 |
MS.gene072697.t1 | AT5G58600 | 36.014 | 286 | 156 | 9 | 35 | 307 | 66 | 337 | 4.91e-59 | 194 |
MS.gene072697.t1 | AT2G30010 | 37.367 | 281 | 149 | 6 | 34 | 301 | 55 | 321 | 5.94e-59 | 194 |
MS.gene072697.t1 | AT2G30900 | 38.224 | 259 | 145 | 6 | 33 | 287 | 41 | 288 | 7.66e-59 | 193 |
MS.gene072697.t1 | AT2G30010 | 37.367 | 281 | 149 | 6 | 34 | 301 | 98 | 364 | 1.29e-58 | 194 |
MS.gene072697.t1 | AT5G58600 | 38.723 | 235 | 132 | 5 | 35 | 268 | 66 | 289 | 3.38e-58 | 189 |
MS.gene072697.t1 | AT2G31110 | 36.614 | 254 | 148 | 5 | 35 | 287 | 45 | 286 | 5.80e-58 | 191 |
MS.gene072697.t1 | AT1G78710 | 36.431 | 269 | 156 | 6 | 20 | 286 | 23 | 278 | 6.36e-57 | 188 |
MS.gene072697.t1 | AT1G73140 | 35.135 | 296 | 163 | 9 | 9 | 289 | 35 | 316 | 1.10e-56 | 189 |
MS.gene072697.t1 | AT2G40150 | 36.184 | 304 | 172 | 9 | 1 | 295 | 41 | 331 | 2.02e-56 | 188 |
MS.gene072697.t1 | AT2G40160 | 35.606 | 264 | 150 | 7 | 35 | 287 | 77 | 331 | 2.98e-56 | 188 |
MS.gene072697.t1 | AT3G55990 | 38.489 | 278 | 151 | 8 | 27 | 296 | 132 | 397 | 3.82e-56 | 189 |
MS.gene072697.t1 | AT2G40160 | 35.606 | 264 | 150 | 7 | 35 | 287 | 77 | 331 | 5.00e-56 | 188 |
MS.gene072697.t1 | AT2G30900 | 39.394 | 231 | 128 | 5 | 33 | 262 | 41 | 260 | 5.89e-56 | 183 |
MS.gene072697.t1 | AT2G38320 | 37.500 | 248 | 141 | 6 | 33 | 274 | 57 | 296 | 6.87e-56 | 187 |
MS.gene072697.t1 | AT3G14850 | 36.742 | 264 | 150 | 6 | 35 | 296 | 34 | 282 | 2.14e-54 | 181 |
MS.gene072697.t1 | AT5G01360 | 34.091 | 264 | 159 | 6 | 33 | 289 | 34 | 289 | 5.67e-54 | 181 |
MS.gene072697.t1 | AT5G01360 | 34.091 | 264 | 159 | 6 | 33 | 289 | 90 | 345 | 2.35e-53 | 181 |
MS.gene072697.t1 | AT2G31110 | 36.681 | 229 | 133 | 4 | 35 | 263 | 45 | 261 | 2.58e-53 | 176 |
MS.gene072697.t1 | AT2G40160 | 35.918 | 245 | 139 | 6 | 35 | 270 | 77 | 312 | 4.97e-53 | 176 |
MS.gene072697.t1 | AT5G01620 | 35.185 | 270 | 158 | 6 | 27 | 289 | 102 | 361 | 4.32e-49 | 170 |
MS.gene072697.t1 | AT5G01620 | 35.185 | 270 | 158 | 6 | 27 | 289 | 102 | 361 | 4.32e-49 | 170 |
MS.gene072697.t1 | AT5G01620 | 35.185 | 270 | 158 | 6 | 27 | 289 | 110 | 369 | 5.67e-49 | 170 |
MS.gene072697.t1 | AT3G11030 | 34.074 | 270 | 161 | 6 | 28 | 289 | 99 | 359 | 7.20e-49 | 169 |
MS.gene072697.t1 | AT2G40320 | 33.696 | 276 | 163 | 7 | 17 | 284 | 66 | 329 | 1.29e-46 | 163 |
MS.gene072697.t1 | AT2G38320 | 36.199 | 221 | 128 | 5 | 59 | 274 | 1 | 213 | 2.70e-45 | 157 |
MS.gene072697.t1 | AT5G51640 | 32.753 | 287 | 157 | 9 | 18 | 287 | 121 | 388 | 2.66e-41 | 150 |
MS.gene072697.t1 | AT1G78710 | 37.824 | 193 | 106 | 5 | 20 | 211 | 16 | 195 | 2.86e-40 | 143 |
MS.gene072697.t1 | AT4G25360 | 33.453 | 278 | 149 | 11 | 27 | 287 | 167 | 425 | 1.58e-39 | 145 |
MS.gene072697.t1 | AT4G25360 | 33.453 | 278 | 149 | 11 | 27 | 287 | 167 | 425 | 1.58e-39 | 145 |
MS.gene072697.t1 | AT1G01430 | 32.423 | 293 | 170 | 10 | 8 | 289 | 75 | 350 | 3.62e-38 | 141 |
MS.gene072697.t1 | AT4G23790 | 32.581 | 310 | 176 | 12 | 13 | 311 | 61 | 348 | 9.56e-37 | 136 |
MS.gene072697.t1 | AT1G70230 | 33.459 | 266 | 144 | 10 | 35 | 287 | 79 | 324 | 6.42e-36 | 134 |
MS.gene072697.t1 | AT2G14530 | 29.492 | 295 | 176 | 12 | 7 | 280 | 32 | 315 | 1.94e-35 | 132 |
MS.gene072697.t1 | AT3G28150 | 32.491 | 277 | 154 | 9 | 30 | 289 | 65 | 325 | 5.11e-35 | 132 |
MS.gene072697.t1 | AT5G64470 | 31.923 | 260 | 153 | 11 | 35 | 280 | 55 | 304 | 1.38e-34 | 128 |
MS.gene072697.t1 | AT5G64470 | 31.923 | 260 | 153 | 11 | 35 | 280 | 55 | 304 | 1.62e-34 | 128 |
MS.gene072697.t1 | AT5G64470 | 31.923 | 260 | 153 | 11 | 35 | 280 | 55 | 304 | 3.27e-34 | 129 |
MS.gene072697.t1 | AT5G15890 | 31.488 | 289 | 171 | 10 | 25 | 304 | 177 | 447 | 3.91e-34 | 131 |
MS.gene072697.t1 | AT5G64470 | 31.923 | 260 | 153 | 11 | 35 | 280 | 55 | 304 | 4.19e-34 | 129 |
MS.gene072697.t1 | AT4G01080 | 31.939 | 263 | 158 | 8 | 34 | 289 | 90 | 338 | 2.73e-33 | 127 |
MS.gene072697.t1 | AT4G11090 | 31.419 | 296 | 175 | 11 | 6 | 289 | 54 | 333 | 3.66e-33 | 127 |
MS.gene072697.t1 | AT3G02440 | 30.370 | 270 | 160 | 9 | 35 | 290 | 135 | 390 | 5.48e-32 | 124 |
MS.gene072697.t1 | AT3G02440 | 30.370 | 270 | 160 | 9 | 35 | 290 | 127 | 382 | 5.74e-32 | 124 |
MS.gene072697.t1 | AT2G34070 | 34.884 | 172 | 100 | 3 | 105 | 275 | 1 | 161 | 5.17e-31 | 117 |
MS.gene072697.t1 | AT5G64020 | 27.692 | 260 | 172 | 7 | 35 | 280 | 57 | 314 | 1.69e-29 | 116 |
MS.gene072697.t1 | AT5G15900 | 29.344 | 259 | 159 | 8 | 35 | 280 | 67 | 314 | 7.22e-29 | 115 |
MS.gene072697.t1 | AT5G15900 | 29.344 | 259 | 159 | 8 | 35 | 280 | 86 | 333 | 1.05e-28 | 115 |
MS.gene072697.t1 | AT3G14850 | 34.021 | 194 | 111 | 6 | 105 | 296 | 1 | 179 | 2.05e-27 | 107 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 116 | 379 | 2.68e-27 | 111 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 192 | 455 | 4.01e-27 | 111 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 210 | 473 | 4.46e-27 | 111 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 210 | 473 | 4.46e-27 | 111 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 210 | 473 | 4.46e-27 | 111 |
MS.gene072697.t1 | AT5G20680 | 29.740 | 269 | 167 | 9 | 33 | 284 | 210 | 473 | 4.46e-27 | 111 |
MS.gene072697.t1 | AT2G37720 | 28.906 | 256 | 166 | 8 | 32 | 273 | 140 | 393 | 1.62e-23 | 100 |
MS.gene072697.t1 | AT2G31110 | 34.074 | 135 | 83 | 3 | 154 | 287 | 9 | 138 | 1.19e-21 | 91.7 |
Find 63 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCAGGATAAATGGTATTTA+AGG | 0.130435 | 7.3:+5438188 | None:intergenic |
GAACTATAGTTTCAGGTTTC+TGG | 0.139405 | 7.3:-5439851 | MS.gene072697:intron |
TTCCCATTGGTTCCTATTAA+TGG | 0.150183 | 7.3:+5439960 | None:intergenic |
CCTTGGAAGGTCACAATCTT+TGG | 0.179023 | 7.3:+5440681 | None:intergenic |
GTATTTAAGGTTTCATTAAA+AGG | 0.220435 | 7.3:+5438201 | None:intergenic |
TATATTCTTCTCAGGATAAA+TGG | 0.237473 | 7.3:+5438179 | None:intergenic |
GCTAGTCTTGCTTCGCATTA+AGG | 0.237479 | 7.3:+5437818 | None:intergenic |
GTTCAGCACCATCTCATTTC+AGG | 0.238683 | 7.3:-5438573 | MS.gene072697:intron |
ATGGAGAGGAGCTGATATTT+TGG | 0.261754 | 7.3:-5439612 | MS.gene072697:CDS |
TCAAAACCTTCATCTATAAA+AGG | 0.284074 | 7.3:+5440757 | None:intergenic |
AGAGAGGGAACTATAGTTTC+AGG | 0.285584 | 7.3:-5439858 | MS.gene072697:CDS |
CAAGAATCTCTAGCATAAAT+AGG | 0.310027 | 7.3:+5440781 | None:intergenic |
TTGTGGGTGATTCCATTAAT+AGG | 0.313259 | 7.3:-5439972 | MS.gene072697:CDS |
TGGAGTTTATAAGAGGAAAA+AGG | 0.315433 | 7.3:-5440002 | MS.gene072697:CDS |
ACTATAGTTCCCTCTCTCTT+TGG | 0.323759 | 7.3:+5439864 | None:intergenic |
TCTGCAACAGGGGAGGTAAT+TGG | 0.336289 | 7.3:-5438257 | MS.gene072697:intron |
GTGATTTAACAAAAGGGTAT+TGG | 0.340659 | 7.3:-5440822 | MS.gene072697:CDS |
CTTGGAAGGTCACAATCTTT+GGG | 0.364337 | 7.3:+5440682 | None:intergenic |
CTGAACTTCGAAAGAAAACT+TGG | 0.373534 | 7.3:+5438590 | None:intergenic |
CTATGATGACTTGGGCTTCA+TGG | 0.375370 | 7.3:-5438642 | MS.gene072697:CDS |
AAAGAGTGTGATTTAACAAA+AGG | 0.376080 | 7.3:-5440829 | MS.gene072697:CDS |
CGTGCCTCATACACTCTCTT+TGG | 0.387282 | 7.3:+5439901 | None:intergenic |
CGAATTGATGCGATTGATCA+TGG | 0.420809 | 7.3:-5439644 | MS.gene072697:CDS |
GAGAAGTGCTAACCCAGCTT+TGG | 0.426335 | 7.3:+5439553 | None:intergenic |
AAAATGTTGGAGTTTATAAG+AGG | 0.432567 | 7.3:-5440009 | MS.gene072697:CDS |
TTGTGAGGGGAATGGAAGAT+TGG | 0.439163 | 7.3:-5440734 | MS.gene072697:CDS |
TCTATGATTATATTCTTCTC+AGG | 0.450722 | 7.3:+5438171 | None:intergenic |
ATCGCATCAATTCGCAAAGT+TGG | 0.456158 | 7.3:+5439653 | None:intergenic |
AGGGGAGGTAATTGGAATTC+AGG | 0.464877 | 7.3:-5438249 | MS.gene072697:CDS |
AGGAAAATTACCAAAGAGAG+AGG | 0.476594 | 7.3:-5439874 | MS.gene072697:CDS |
TTTCGAAAGCTATGATGACT+TGG | 0.480355 | 7.3:-5438651 | MS.gene072697:CDS |
TATGATGACTTGGGCTTCAT+GGG | 0.480835 | 7.3:-5438641 | MS.gene072697:CDS |
AGCTGTAGAAACATTTAGCC+GGG | 0.486758 | 7.3:+5438675 | None:intergenic |
TCACATCACAAAACCAAAGC+TGG | 0.490317 | 7.3:-5439566 | MS.gene072697:CDS |
TTGATCATGGTTCGTCAAGA+TGG | 0.494455 | 7.3:-5439631 | MS.gene072697:CDS |
TTCGAAAGCTATGATGACTT+GGG | 0.498467 | 7.3:-5438650 | MS.gene072697:CDS |
AAGAGTGTGATTTAACAAAA+GGG | 0.500174 | 7.3:-5440828 | MS.gene072697:CDS |
ATTCCATTAATAGGAACCAA+TGG | 0.514445 | 7.3:-5439963 | MS.gene072697:CDS |
TGCACAACATTGATTCCCAT+TGG | 0.516029 | 7.3:+5439947 | None:intergenic |
CCAAAGATTGTGACCTTCCA+AGG | 0.518341 | 7.3:-5440681 | MS.gene072697:intron |
TGGATAGAAACTTTACTAAG+TGG | 0.522870 | 7.3:-5440714 | MS.gene072697:CDS |
CATGAAAGCAAAGCAAGAGT+AGG | 0.524542 | 7.3:-5439689 | MS.gene072697:CDS |
AGGATTTATTACTATCAAGA+AGG | 0.525446 | 7.3:-5438712 | MS.gene072697:CDS |
AGATCCAAAGAGAGTGTATG+AGG | 0.528363 | 7.3:-5439905 | MS.gene072697:CDS |
AAGCTGTAGAAACATTTAGC+CGG | 0.530807 | 7.3:+5438674 | None:intergenic |
TTCCATTAATAGGAACCAAT+GGG | 0.535430 | 7.3:-5439962 | MS.gene072697:CDS |
ATGAAAGCAAAGCAAGAGTA+GGG | 0.551438 | 7.3:-5439688 | MS.gene072697:CDS |
GAAACTTTACTAAGTGGAGA+TGG | 0.558108 | 7.3:-5440708 | MS.gene072697:CDS |
GAAACAAACCTGAAATGAGA+TGG | 0.579203 | 7.3:+5438565 | None:intergenic |
CACATCACAAAACCAAAGCT+GGG | 0.583781 | 7.3:-5439565 | MS.gene072697:intron |
AAGGAACTCTAGTTCATCCC+CGG | 0.588297 | 7.3:-5438693 | MS.gene072697:CDS |
TGAACTTCGAAAGAAAACTT+GGG | 0.590332 | 7.3:+5438591 | None:intergenic |
GGTTTCATTAAAAGGATGAG+TGG | 0.595178 | 7.3:+5438209 | None:intergenic |
GATGACTTGGGCTTCATGGG+TGG | 0.595229 | 7.3:-5438638 | MS.gene072697:CDS |
TTGAGAGAGACTACCTTGGA+AGG | 0.601243 | 7.3:+5440668 | None:intergenic |
GAGTGTATGAGGCACGTGGA+AGG | 0.601700 | 7.3:-5439894 | MS.gene072697:CDS |
CATGGTTCGTCAAGATGGAG+AGG | 0.632218 | 7.3:-5439626 | MS.gene072697:CDS |
GGAAAATTACCAAAGAGAGA+GGG | 0.638676 | 7.3:-5439873 | MS.gene072697:CDS |
AATGCATGGTAATAGAACAA+AGG | 0.639849 | 7.3:-5440926 | MS.gene072697:CDS |
GCTGTAGAAACATTTAGCCG+GGG | 0.684407 | 7.3:+5438676 | None:intergenic |
AAGAGAGTGTATGAGGCACG+TGG | 0.685399 | 7.3:-5439898 | MS.gene072697:CDS |
GGAGGTAATTGGAATTCAGG+AGG | 0.688041 | 7.3:-5438246 | MS.gene072697:CDS |
TTCAGGAGGACATTGTACAG+AGG | 0.733974 | 7.3:-5438232 | MS.gene072697:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGTCAATTTATCAAATTTA+GGG | - | chr7.3:5439616-5439635 | MS.gene072697:CDS | 15.0% |
!! | TTTGTCAATTTATCAAATTT+AGG | - | chr7.3:5439615-5439634 | MS.gene072697:CDS | 15.0% |
!!! | AAAGGTATTATTCTATATAT+TGG | - | chr7.3:5439723-5439742 | MS.gene072697:CDS | 15.0% |
!!! | AAGGTATTATTCTATATATT+GGG | - | chr7.3:5439724-5439743 | MS.gene072697:CDS | 15.0% |
!!! | AGAACAAATATCAAATATTT+TGG | + | chr7.3:5438974-5438993 | None:intergenic | 15.0% |
!!! | ATTTTAAGTATTCAACTTTA+GGG | + | chr7.3:5439466-5439485 | None:intergenic | 15.0% |
!!! | GAACAAATATCAAATATTTT+GGG | + | chr7.3:5438973-5438992 | None:intergenic | 15.0% |
!! | AATGTATAATTGTATATGAC+TGG | - | chr7.3:5438946-5438965 | MS.gene072697:intron | 20.0% |
!! | AGGTATTATTCTATATATTG+GGG | - | chr7.3:5439725-5439744 | MS.gene072697:CDS | 20.0% |
!! | AGTTACAGAAATAATGAATA+GGG | + | chr7.3:5440819-5440838 | None:intergenic | 20.0% |
!! | ATAAATGTTAAACAAAAGCT+TGG | + | chr7.3:5439862-5439881 | None:intergenic | 20.0% |
!! | ATTATTGACAAGACATAATT+AGG | - | chr7.3:5438542-5438561 | MS.gene072697:intron | 20.0% |
!! | CATCTATAAGAAATCATATT+AGG | + | chr7.3:5439345-5439364 | None:intergenic | 20.0% |
!! | GTTGAATACTTAAAATGAAA+CGG | - | chr7.3:5439470-5439489 | MS.gene072697:intron | 20.0% |
!! | TAATTATTCAGAACTTTACT+TGG | - | chr7.3:5438916-5438935 | MS.gene072697:intron | 20.0% |
!! | TGAAAAAAGTTGTCTATATT+TGG | - | chr7.3:5440413-5440432 | MS.gene072697:intron | 20.0% |
!! | TTATTGACAAGACATAATTA+GGG | - | chr7.3:5438543-5438562 | MS.gene072697:intron | 20.0% |
!! | TTGAATACTTAAAATGAAAC+GGG | - | chr7.3:5439471-5439490 | MS.gene072697:intron | 20.0% |
!!! | ATGAAGTTTTAATCTAATAG+AGG | - | chr7.3:5439676-5439695 | MS.gene072697:CDS | 20.0% |
!!! | CAAAAGACATACAATTATTT+TGG | - | chr7.3:5438440-5438459 | MS.gene072697:intron | 20.0% |
!!! | CATGTTAGTTTTTTTTTAGT+AGG | + | chr7.3:5440000-5440019 | None:intergenic | 20.0% |
!!! | CATTTTAAGTATTCAACTTT+AGG | + | chr7.3:5439467-5439486 | None:intergenic | 20.0% |
!!! | GCAAAGTTAATTTTATTCTT+TGG | - | chr7.3:5438679-5438698 | MS.gene072697:CDS | 20.0% |
!!! | GTATTTAAGGTTTCATTAAA+AGG | + | chr7.3:5440546-5440565 | None:intergenic | 20.0% |
!!! | TGAAGTTTTAATCTAATAGA+GGG | - | chr7.3:5439677-5439696 | MS.gene072697:CDS | 20.0% |
!!! | TGAAGTTTTGATTTTTAAGA+AGG | - | chr7.3:5437872-5437891 | MS.gene072697:intron | 20.0% |
!!! | TTAAAATACTAGAGCATTTA+AGG | + | chr7.3:5439266-5439285 | None:intergenic | 20.0% |
! | AAAATGTTGGAGTTTATAAG+AGG | - | chr7.3:5438735-5438754 | MS.gene072697:intron | 25.0% |
! | AGGATTTATTACTATCAAGA+AGG | - | chr7.3:5440032-5440051 | MS.gene072697:intron | 25.0% |
! | ATAAGTTGTTAATCCAAACA+AGG | + | chr7.3:5438175-5438194 | None:intergenic | 25.0% |
! | ATGTATTGTGTTAGTCAATT+TGG | - | chr7.3:5438511-5438530 | MS.gene072697:intron | 25.0% |
! | ATTATTCTATATATTGGGGT+TGG | - | chr7.3:5439729-5439748 | MS.gene072697:CDS | 25.0% |
! | CAAAATCATTGTTTACTCTT+AGG | - | chr7.3:5438628-5438647 | MS.gene072697:CDS | 25.0% |
! | CAAATAAGTCAATCCAAATA+AGG | - | chr7.3:5438378-5438397 | MS.gene072697:intron | 25.0% |
! | CAGTTACAGAAATAATGAAT+AGG | + | chr7.3:5440820-5440839 | None:intergenic | 25.0% |
! | TATATTCTTCTCAGGATAAA+TGG | + | chr7.3:5440568-5440587 | None:intergenic | 25.0% |
! | TCAAAACCTTCATCTATAAA+AGG | + | chr7.3:5437990-5438009 | None:intergenic | 25.0% |
! | TCTATGATTATATTCTTCTC+AGG | + | chr7.3:5440576-5440595 | None:intergenic | 25.0% |
! | TTAGACACATGTTATTCTAT+AGG | + | chr7.3:5439564-5439583 | None:intergenic | 25.0% |
! | TTATTCTATATATTGGGGTT+GGG | - | chr7.3:5439730-5439749 | MS.gene072697:CDS | 25.0% |
! | TTCACTTACAAAATAGATGA+GGG | - | chr7.3:5440775-5440794 | MS.gene072697:CDS | 25.0% |
! | TTTCACTTACAAAATAGATG+AGG | - | chr7.3:5440774-5440793 | MS.gene072697:CDS | 25.0% |
!! | AAAGAGTGTGATTTAACAAA+AGG | - | chr7.3:5437915-5437934 | MS.gene072697:intron | 25.0% |
!! | AAGAGTGTGATTTAACAAAA+GGG | - | chr7.3:5437916-5437935 | MS.gene072697:intron | 25.0% |
!! | CATTCATAAGTAGTTTTTCA+AGG | + | chr7.3:5439498-5439517 | None:intergenic | 25.0% |
!! | GTCAAAGCATTTCAAATAAA+TGG | - | chr7.3:5440299-5440318 | MS.gene072697:intron | 25.0% |
!! | GTCTTTTGTCAATAATTTCA+TGG | + | chr7.3:5438428-5438447 | None:intergenic | 25.0% |
!! | TAACTAGTTTGTCAGAATTT+AGG | - | chr7.3:5440640-5440659 | MS.gene072697:intron | 25.0% |
!!! | ATAAGTTTTGTGAGATTGTT+TGG | + | chr7.3:5438343-5438362 | None:intergenic | 25.0% |
!!! | GGATATTATTTTTCTGTCAT+AGG | - | chr7.3:5438700-5438719 | MS.gene072697:CDS | 25.0% |
!!! | GTGTTGAACTTTATTTTAAG+AGG | - | chr7.3:5439374-5439393 | MS.gene072697:intron | 25.0% |
!!! | GTTAATTTTGAAAAATGAGC+TGG | - | chr7.3:5439823-5439842 | MS.gene072697:intron | 25.0% |
!!! | TAAGTTTTGTGAGATTGTTT+GGG | + | chr7.3:5438342-5438361 | None:intergenic | 25.0% |
!!! | TGTTTTAAGTTGTTTTCGTA+AGG | - | chr7.3:5438313-5438332 | MS.gene072697:intron | 25.0% |
!!! | TTTGATTTTTAAGAAGGTTG+AGG | - | chr7.3:5437878-5437897 | MS.gene072697:intron | 25.0% |
AAAAAAAACCCAGAGAAAGT+TGG | - | chr7.3:5439786-5439805 | MS.gene072697:intron | 30.0% | |
AACAACACCTTACAATATCA+AGG | - | chr7.3:5439647-5439666 | MS.gene072697:CDS | 30.0% | |
ACAAATCGACAAAAAGTTCA+CGG | + | chr7.3:5439239-5439258 | None:intergenic | 30.0% | |
ACTACAATCTTGAATTCTTG+AGG | + | chr7.3:5440706-5440725 | None:intergenic | 30.0% | |
AGTTATATTCAACCATGTCA+CGG | + | chr7.3:5440625-5440644 | None:intergenic | 30.0% | |
ATGTATTTCGTTGGTCAATT+TGG | - | chr7.3:5438401-5438420 | MS.gene072697:intron | 30.0% | |
ATTCCATTAATAGGAACCAA+TGG | - | chr7.3:5438781-5438800 | MS.gene072697:intron | 30.0% | |
CAAATAAGGATGTATTTCGT+TGG | - | chr7.3:5438392-5438411 | MS.gene072697:intron | 30.0% | |
CAACGAAATACATCCTTATT+TGG | + | chr7.3:5438394-5438413 | None:intergenic | 30.0% | |
CAAGAATCTCTAGCATAAAT+AGG | + | chr7.3:5437966-5437985 | None:intergenic | 30.0% | |
CTCAGGATAAATGGTATTTA+AGG | + | chr7.3:5440559-5440578 | None:intergenic | 30.0% | |
GAATTCAAGATTGTAGTCAT+TGG | - | chr7.3:5440709-5440728 | MS.gene072697:CDS | 30.0% | |
GTACTTGAAATTGTAAGTTG+CGG | + | chr7.3:5439592-5439611 | None:intergenic | 30.0% | |
GTTCAATGCAACAAAAATGT+TGG | - | chr7.3:5438722-5438741 | MS.gene072697:intron | 30.0% | |
TAAACAAAAGCTTGGTACTT+AGG | + | chr7.3:5439854-5439873 | None:intergenic | 30.0% | |
TATTCCAATAACAAAACCGT+TGG | + | chr7.3:5440241-5440260 | None:intergenic | 30.0% | |
TATTCTATATATTGGGGTTG+GGG | - | chr7.3:5439731-5439750 | MS.gene072697:CDS | 30.0% | |
TGAACTTCGAAAGAAAACTT+GGG | + | chr7.3:5440156-5440175 | None:intergenic | 30.0% | |
TGGAGTTTATAAGAGGAAAA+AGG | - | chr7.3:5438742-5438761 | MS.gene072697:intron | 30.0% | |
TGGATAGAAACTTTACTAAG+TGG | - | chr7.3:5438030-5438049 | MS.gene072697:intron | 30.0% | |
TGTAGAGTTATGTTCAAGAA+AGG | - | chr7.3:5439309-5439328 | MS.gene072697:intron | 30.0% | |
TTCCATTAATAGGAACCAAT+GGG | - | chr7.3:5438782-5438801 | MS.gene072697:intron | 30.0% | |
TTCTAGTCCTTGATATTGTA+AGG | + | chr7.3:5439657-5439676 | None:intergenic | 30.0% | |
TTGCAATTGTAGTTATGCTT+AGG | - | chr7.3:5438149-5438168 | MS.gene072697:intron | 30.0% | |
! | AGATGGTTAATGGATATATC+AGG | + | chr7.3:5440341-5440360 | None:intergenic | 30.0% |
! | ATAACAAAACCGTTGGATTT+TGG | + | chr7.3:5440234-5440253 | None:intergenic | 30.0% |
! | CATTCATTTTCATGAACTAG+TGG | + | chr7.3:5440863-5440882 | None:intergenic | 30.0% |
! | GTGATTTAACAAAAGGGTAT+TGG | - | chr7.3:5437922-5437941 | MS.gene072697:intron | 30.0% |
! | TCTTGTCCTTTTATAGATGA+AGG | - | chr7.3:5437981-5438000 | MS.gene072697:intron | 30.0% |
! | TTGTCAGAATTTAGGATAGA+TGG | - | chr7.3:5440648-5440667 | MS.gene072697:intron | 30.0% |
! | TTGTGTTTTTCTCCCATAAA+TGG | + | chr7.3:5440682-5440701 | None:intergenic | 30.0% |
! | TTTTTCTCCCATAAATGGAT+GGG | + | chr7.3:5440677-5440696 | None:intergenic | 30.0% |
!! | GCTGTTTTCATAAGCTATTT+TGG | - | chr7.3:5438252-5438271 | MS.gene072697:intron | 30.0% |
!! | TGATATTGTAAGGTGTTGTT+AGG | + | chr7.3:5439647-5439666 | None:intergenic | 30.0% |
!!! | AAATCCAACGGTTTTGTTAT+TGG | - | chr7.3:5440234-5440253 | MS.gene072697:intron | 30.0% |
!!! | TTTTTTGACAACAATCCAAG+TGG | - | chr7.3:5440277-5440296 | MS.gene072697:intron | 30.0% |
AACAACTCATTCCATACATC+TGG | + | chr7.3:5440750-5440769 | None:intergenic | 35.0% | |
AAGCTGTAGAAACATTTAGC+CGG | + | chr7.3:5440073-5440092 | None:intergenic | 35.0% | |
AATCAAACTTCGTATTCCTG+TGG | + | chr7.3:5439977-5439996 | None:intergenic | 35.0% | |
ACATCCAAGAACTATAGTGA+CGG | - | chr7.3:5438585-5438604 | MS.gene072697:CDS | 35.0% | |
AGGAAAATTACCAAAGAGAG+AGG | - | chr7.3:5438870-5438889 | MS.gene072697:intron | 35.0% | |
AGTATCTTGCAGACAAAGAA+AGG | - | chr7.3:5439705-5439724 | MS.gene072697:CDS | 35.0% | |
ATCAAACTTCGTATTCCTGT+GGG | + | chr7.3:5439976-5439995 | None:intergenic | 35.0% | |
ATGAAAGCAAAGCAAGAGTA+GGG | - | chr7.3:5439056-5439075 | MS.gene072697:intron | 35.0% | |
CTAACATGTGATCGTATAAC+AGG | - | chr7.3:5440012-5440031 | MS.gene072697:CDS | 35.0% | |
CTGAACTTCGAAAGAAAACT+TGG | + | chr7.3:5440157-5440176 | None:intergenic | 35.0% | |
CTTTGTCTGCAAGATACTTA+AGG | + | chr7.3:5439703-5439722 | None:intergenic | 35.0% | |
GAAACAAACCTGAAATGAGA+TGG | + | chr7.3:5440182-5440201 | None:intergenic | 35.0% | |
GAAACTTTACTAAGTGGAGA+TGG | - | chr7.3:5438036-5438055 | MS.gene072697:intron | 35.0% | |
GATTAATTCCGTTCAGTAGA+TGG | + | chr7.3:5440358-5440377 | None:intergenic | 35.0% | |
GGAAAATTACCAAAGAGAGA+GGG | - | chr7.3:5438871-5438890 | MS.gene072697:intron | 35.0% | |
GGTTTCATTAAAAGGATGAG+TGG | + | chr7.3:5440538-5440557 | None:intergenic | 35.0% | |
GTTATATTCAACCATGTCAC+GGG | + | chr7.3:5440624-5440643 | None:intergenic | 35.0% | |
TCCATTAACCATCTACTGAA+CGG | - | chr7.3:5440347-5440366 | MS.gene072697:intron | 35.0% | |
TGTTCTTTCTGCAACTTTGT+AGG | - | chr7.3:5438988-5439007 | MS.gene072697:intron | 35.0% | |
TTCGAAAGCTATGATGACTT+GGG | - | chr7.3:5440094-5440113 | MS.gene072697:intron | 35.0% | |
TTGTGGGTGATTCCATTAAT+AGG | - | chr7.3:5438772-5438791 | MS.gene072697:intron | 35.0% | |
TTTCGAAAGCTATGATGACT+TGG | - | chr7.3:5440093-5440112 | MS.gene072697:intron | 35.0% | |
! | ATCAGAGTCGCTAACTATTT+TGG | + | chr7.3:5440463-5440482 | None:intergenic | 35.0% |
! | ATCCACTCTGCAATAGTTTT+AGG | - | chr7.3:5440206-5440225 | MS.gene072697:intron | 35.0% |
! | GTTTTTCTCCCATAAATGGA+TGG | + | chr7.3:5440678-5440697 | None:intergenic | 35.0% |
! | TTTGAAATGCTTTGACCACT+TGG | + | chr7.3:5440295-5440314 | None:intergenic | 35.0% |
! | TTTTAGGCTCCAAAATCCAA+CGG | - | chr7.3:5440222-5440241 | MS.gene072697:intron | 35.0% |
!! | GAACTATAGTTTCAGGTTTC+TGG | - | chr7.3:5438893-5438912 | MS.gene072697:intron | 35.0% |
!! | TTCCCATTGGTTCCTATTAA+TGG | + | chr7.3:5438787-5438806 | None:intergenic | 35.0% |
!!! | AGATGAAGGTTTTGATTGTG+AGG | - | chr7.3:5437995-5438014 | MS.gene072697:intron | 35.0% |
!!! | AGGAAAAAGGCTAGTTTTTG+TGG | - | chr7.3:5438755-5438774 | MS.gene072697:intron | 35.0% |
!!! | ATGAAGGTTTTGATTGTGAG+GGG | - | chr7.3:5437997-5438016 | MS.gene072697:intron | 35.0% |
!!! | GATGAAGGTTTTGATTGTGA+GGG | - | chr7.3:5437996-5438015 | MS.gene072697:intron | 35.0% |
!!! | GGAAAAAGGCTAGTTTTTGT+GGG | - | chr7.3:5438756-5438775 | MS.gene072697:intron | 35.0% |
!!! | TTTTTTCACGACAATCCAAG+TGG | + | chr7.3:5440401-5440420 | None:intergenic | 35.0% |
ACTATAGTTCCCTCTCTCTT+TGG | + | chr7.3:5438883-5438902 | None:intergenic | 40.0% | |
ACTCTGATACATTCTGCAAC+AGG | - | chr7.3:5440475-5440494 | MS.gene072697:intron | 40.0% | |
AGAGAGGGAACTATAGTTTC+AGG | - | chr7.3:5438886-5438905 | MS.gene072697:intron | 40.0% | |
AGCCTAAAACTATTGCAGAG+TGG | + | chr7.3:5440211-5440230 | None:intergenic | 40.0% | |
AGCTGTAGAAACATTTAGCC+GGG | + | chr7.3:5440072-5440091 | None:intergenic | 40.0% | |
ATCGCATCAATTCGCAAAGT+TGG | + | chr7.3:5439094-5439113 | None:intergenic | 40.0% | |
ATGGTCACCCATCCATTTAT+GGG | - | chr7.3:5440667-5440686 | MS.gene072697:intron | 40.0% | |
CACATCACAAAACCAAAGCT+GGG | - | chr7.3:5439179-5439198 | MS.gene072697:intron | 40.0% | |
CATGAAAGCAAAGCAAGAGT+AGG | - | chr7.3:5439055-5439074 | MS.gene072697:intron | 40.0% | |
CGAATTGATGCGATTGATCA+TGG | - | chr7.3:5439100-5439119 | MS.gene072697:intron | 40.0% | |
CTCTGATACATTCTGCAACA+GGG | - | chr7.3:5440476-5440495 | MS.gene072697:intron | 40.0% | |
CTTAAACCACGTTAACCACT+TGG | - | chr7.3:5440383-5440402 | MS.gene072697:intron | 40.0% | |
CTTGGAAGGTCACAATCTTT+GGG | + | chr7.3:5438065-5438084 | None:intergenic | 40.0% | |
GAATTTGAGAGAGACTACCT+TGG | + | chr7.3:5438083-5438102 | None:intergenic | 40.0% | |
GGAGTTGCAAAAGTGAAGTT+AGG | - | chr7.3:5438649-5438668 | MS.gene072697:CDS | 40.0% | |
GTTACCGTCACTATAGTTCT+TGG | + | chr7.3:5438592-5438611 | None:intergenic | 40.0% | |
TACTCTTCTCAACTAGCATG+TGG | - | chr7.3:5439900-5439919 | MS.gene072697:CDS | 40.0% | |
TCACATCACAAAACCAAAGC+TGG | - | chr7.3:5439178-5439197 | MS.gene072697:intron | 40.0% | |
TCCGTTCAGTAGATGGTTAA+TGG | + | chr7.3:5440351-5440370 | None:intergenic | 40.0% | |
TCTGATACATTCTGCAACAG+GGG | - | chr7.3:5440477-5440496 | MS.gene072697:intron | 40.0% | |
TGCTACCATAAAGCAACTTC+TGG | + | chr7.3:5439427-5439446 | None:intergenic | 40.0% | |
TTGATCATGGTTCGTCAAGA+TGG | - | chr7.3:5439113-5439132 | MS.gene072697:intron | 40.0% | |
! | AGATCCAAAGAGAGTGTATG+AGG | - | chr7.3:5438839-5438858 | MS.gene072697:intron | 40.0% |
! | ATGGAGAGGAGCTGATATTT+TGG | - | chr7.3:5439132-5439151 | MS.gene072697:intron | 40.0% |
! | GCATTTGAGGTTAAGACTTG+AGG | + | chr7.3:5439401-5439420 | None:intergenic | 40.0% |
! | TATGATGACTTGGGCTTCAT+GGG | - | chr7.3:5440103-5440122 | MS.gene072697:intron | 40.0% |
! | TGGTTTTCAACACAGCACAT+TGG | - | chr7.3:5439152-5439171 | MS.gene072697:intron | 40.0% |
! | TTTTCAACACAGCACATTGG+TGG | - | chr7.3:5439155-5439174 | MS.gene072697:intron | 40.0% |
!! | AGTTATGCTTAGGCCTTGTT+TGG | - | chr7.3:5438159-5438178 | MS.gene072697:intron | 40.0% |
!! | TGCACAACATTGATTCCCAT+TGG | + | chr7.3:5438800-5438819 | None:intergenic | 40.0% |
ACTAGCATGTGGTTGATCAC+TGG | - | chr7.3:5439911-5439930 | MS.gene072697:CDS | 45.0% | |
AGATGAAAACTCCCGTGACA+TGG | - | chr7.3:5440610-5440629 | MS.gene072697:intron | 45.0% | |
AGCACATGCCAACTTTCTCT+GGG | + | chr7.3:5439797-5439816 | None:intergenic | 45.0% | |
AGGGGAGGTAATTGGAATTC+AGG | - | chr7.3:5440495-5440514 | MS.gene072697:intron | 45.0% | |
AGTGTGTTTAAGTGTCCCAC+AGG | - | chr7.3:5439958-5439977 | MS.gene072697:CDS | 45.0% | |
ATCACTGGATTTAGCGCAAG+TGG | - | chr7.3:5439926-5439945 | MS.gene072697:CDS | 45.0% | |
CAACTTCTGGACTGCATTTG+AGG | + | chr7.3:5439414-5439433 | None:intergenic | 45.0% | |
CCAAAGATTGTGACCTTCCA+AGG | - | chr7.3:5438063-5438082 | MS.gene072697:intron | 45.0% | |
CCTTGGAAGGTCACAATCTT+TGG | + | chr7.3:5438066-5438085 | None:intergenic | 45.0% | |
GACAATCCAAGTGGTTAACG+TGG | + | chr7.3:5440392-5440411 | None:intergenic | 45.0% | |
GATGGTCACCCATCCATTTA+TGG | - | chr7.3:5440666-5440685 | MS.gene072697:intron | 45.0% | |
GCTGTAGAAACATTTAGCCG+GGG | + | chr7.3:5440071-5440090 | None:intergenic | 45.0% | |
GGAGGTAATTGGAATTCAGG+AGG | - | chr7.3:5440498-5440517 | MS.gene072697:intron | 45.0% | |
GTTCAGCACCATCTCATTTC+AGG | - | chr7.3:5440171-5440190 | MS.gene072697:intron | 45.0% | |
TTCAGGAGGACATTGTACAG+AGG | - | chr7.3:5440512-5440531 | MS.gene072697:intron | 45.0% | |
TTGAGAGAGACTACCTTGGA+AGG | + | chr7.3:5438079-5438098 | None:intergenic | 45.0% | |
TTGTGAGGGGAATGGAAGAT+TGG | - | chr7.3:5438010-5438029 | MS.gene072697:intron | 45.0% | |
! | AAGGAACTCTAGTTCATCCC+CGG | - | chr7.3:5440051-5440070 | MS.gene072697:intron | 45.0% |
! | CTATGATGACTTGGGCTTCA+TGG | - | chr7.3:5440102-5440121 | MS.gene072697:intron | 45.0% |
! | GCAGTCCAGAAGTTGCTTTA+TGG | - | chr7.3:5439419-5439438 | MS.gene072697:intron | 45.0% |
! | GTAGTCATTGGTGTCTTCCA+GGG | - | chr7.3:5440721-5440740 | MS.gene072697:CDS | 45.0% |
! | TAGTCATTGGTGTCTTCCAG+GGG | - | chr7.3:5440722-5440741 | MS.gene072697:CDS | 45.0% |
! | TGTAGTCATTGGTGTCTTCC+AGG | - | chr7.3:5440720-5440739 | MS.gene072697:CDS | 45.0% |
!!! | GGTTTTGATTGTGAGGGGAA+TGG | - | chr7.3:5438002-5438021 | MS.gene072697:intron | 45.0% |
!!! | AAATTCAATATTTTTTTTTT+TGG | - | chr7.3:5438097-5438116 | MS.gene072697:intron | 5.0% |
CAGCACATGCCAACTTTCTC+TGG | + | chr7.3:5439798-5439817 | None:intergenic | 50.0% | |
CATGGTTCGTCAAGATGGAG+AGG | - | chr7.3:5439118-5439137 | MS.gene072697:intron | 50.0% | |
CGTGCCTCATACACTCTCTT+TGG | + | chr7.3:5438846-5438865 | None:intergenic | 50.0% | |
GATACATTCTGCAACAGGGG+AGG | - | chr7.3:5440480-5440499 | MS.gene072697:intron | 50.0% | |
TCTGCAACAGGGGAGGTAAT+TGG | - | chr7.3:5440487-5440506 | MS.gene072697:intron | 50.0% | |
TTCCAGGGGTTCCAGATGTA+TGG | - | chr7.3:5440736-5440755 | MS.gene072697:CDS | 50.0% | |
! | AAGAGAGTGTATGAGGCACG+TGG | - | chr7.3:5438846-5438865 | MS.gene072697:intron | 50.0% |
! | TTCCATACATCTGGAACCCC+TGG | + | chr7.3:5440741-5440760 | None:intergenic | 50.0% |
!! | GAGAAGTGCTAACCCAGCTT+TGG | + | chr7.3:5439194-5439213 | None:intergenic | 50.0% |
GAGTGTATGAGGCACGTGGA+AGG | - | chr7.3:5438850-5438869 | MS.gene072697:intron | 55.0% | |
! | GATGACTTGGGCTTCATGGG+TGG | - | chr7.3:5440106-5440125 | MS.gene072697:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 5437819 | 5440947 | 5437819 | ID=MS.gene072697 |
chr7.3 | mRNA | 5437819 | 5440947 | 5437819 | ID=MS.gene072697.t1;Parent=MS.gene072697 |
chr7.3 | exon | 5440682 | 5440947 | 5440682 | ID=MS.gene072697.t1.exon1;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5440682 | 5440947 | 5440682 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
chr7.3 | exon | 5439852 | 5440044 | 5439852 | ID=MS.gene072697.t1.exon2;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5439852 | 5440044 | 5439852 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
chr7.3 | exon | 5439566 | 5439756 | 5439566 | ID=MS.gene072697.t1.exon3;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5439566 | 5439756 | 5439566 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
chr7.3 | exon | 5438574 | 5438732 | 5438574 | ID=MS.gene072697.t1.exon4;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5438574 | 5438732 | 5438574 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
chr7.3 | exon | 5438164 | 5438269 | 5438164 | ID=MS.gene072697.t1.exon5;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5438164 | 5438269 | 5438164 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
chr7.3 | exon | 5437819 | 5437860 | 5437819 | ID=MS.gene072697.t1.exon6;Parent=MS.gene072697.t1 |
chr7.3 | CDS | 5437819 | 5437860 | 5437819 | ID=cds.MS.gene072697.t1;Parent=MS.gene072697.t1 |
Gene Sequence |
Protein sequence |