Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072755.t1 | XP_024638960.1 | 96.9 | 800 | 23 | 1 | 1 | 798 | 1 | 800 | 0.00E+00 | 1496.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072755.t1 | Q9FFR9 | 67.2 | 793 | 247 | 7 | 1 | 783 | 1 | 790 | 6.4e-297 | 1021.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072755.t1 | G7KAQ3 | 96.9 | 800 | 23 | 1 | 1 | 798 | 1 | 800 | 0.0e+00 | 1496.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018570 | MS.gene072755 | PPI |
MS.gene065903 | MS.gene072755 | PPI |
MS.gene68584 | MS.gene072755 | PPI |
MS.gene061889 | MS.gene072755 | PPI |
MS.gene018569 | MS.gene072755 | PPI |
MS.gene09864 | MS.gene072755 | PPI |
MS.gene09863 | MS.gene072755 | PPI |
MS.gene065366 | MS.gene072755 | PPI |
MS.gene072755 | MS.gene006576 | PPI |
MS.gene061890 | MS.gene072755 | PPI |
MS.gene030202 | MS.gene072755 | PPI |
MS.gene030201 | MS.gene072755 | PPI |
MS.gene26746 | MS.gene072755 | PPI |
MS.gene031733 | MS.gene072755 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072755.t1 | MTR_5g009770 | 96.875 | 800 | 23 | 1 | 1 | 798 | 1 | 800 | 0.0 | 1578 |
MS.gene072755.t1 | MTR_5g009780 | 88.875 | 800 | 87 | 1 | 1 | 798 | 1 | 800 | 0.0 | 1445 |
MS.gene072755.t1 | MTR_5g009800 | 85.859 | 792 | 93 | 1 | 1 | 792 | 1 | 773 | 0.0 | 1368 |
MS.gene072755.t1 | MTR_5g009770 | 96.861 | 669 | 19 | 1 | 132 | 798 | 1 | 669 | 0.0 | 1321 |
MS.gene072755.t1 | MTR_4g078120 | 61.063 | 809 | 297 | 6 | 6 | 798 | 3 | 809 | 0.0 | 956 |
MS.gene072755.t1 | MTR_4g123583 | 60.456 | 789 | 294 | 5 | 11 | 784 | 8 | 793 | 0.0 | 936 |
MS.gene072755.t1 | MTR_8g093780 | 47.415 | 793 | 392 | 12 | 4 | 777 | 5 | 791 | 0.0 | 729 |
MS.gene072755.t1 | MTR_3g096380 | 46.363 | 811 | 403 | 11 | 11 | 798 | 14 | 815 | 0.0 | 708 |
MS.gene072755.t1 | MTR_7g099800 | 50.801 | 811 | 348 | 15 | 15 | 777 | 8 | 815 | 0.0 | 687 |
MS.gene072755.t1 | MTR_2g011520 | 45.269 | 782 | 411 | 10 | 17 | 791 | 2 | 773 | 0.0 | 683 |
MS.gene072755.t1 | MTR_7g099750 | 48.599 | 821 | 344 | 17 | 15 | 777 | 8 | 808 | 0.0 | 657 |
MS.gene072755.t1 | MTR_7g099820 | 47.215 | 790 | 381 | 12 | 16 | 778 | 5 | 785 | 0.0 | 650 |
MS.gene072755.t1 | MTR_7g099820 | 48.991 | 694 | 329 | 9 | 16 | 691 | 5 | 691 | 0.0 | 619 |
MS.gene072755.t1 | MTR_3g031170 | 34.395 | 785 | 480 | 12 | 2 | 776 | 19 | 778 | 1.09e-139 | 432 |
MS.gene072755.t1 | MTR_2g040100 | 33.045 | 808 | 498 | 18 | 22 | 797 | 35 | 831 | 1.96e-134 | 420 |
MS.gene072755.t1 | MTR_3g071990 | 31.532 | 777 | 500 | 13 | 10 | 776 | 11 | 765 | 2.14e-124 | 392 |
MS.gene072755.t1 | MTR_1g043400 | 32.335 | 801 | 483 | 22 | 17 | 780 | 10 | 788 | 1.07e-122 | 388 |
MS.gene072755.t1 | MTR_1g045870 | 32.456 | 798 | 471 | 22 | 17 | 780 | 10 | 773 | 6.95e-121 | 383 |
MS.gene072755.t1 | MTR_5g074340 | 30.769 | 780 | 495 | 15 | 17 | 776 | 29 | 783 | 3.06e-119 | 379 |
MS.gene072755.t1 | MTR_5g074380 | 31.877 | 778 | 483 | 16 | 19 | 776 | 76 | 826 | 1.18e-118 | 379 |
MS.gene072755.t1 | MTR_5g067690 | 30.875 | 800 | 507 | 16 | 12 | 780 | 11 | 795 | 4.11e-117 | 374 |
MS.gene072755.t1 | MTR_5g074360 | 30.485 | 784 | 499 | 14 | 19 | 779 | 31 | 791 | 3.18e-114 | 366 |
MS.gene072755.t1 | MTR_0002s1180 | 30.672 | 789 | 506 | 17 | 18 | 780 | 16 | 789 | 7.16e-114 | 365 |
MS.gene072755.t1 | MTR_5g074320 | 31.717 | 722 | 460 | 13 | 68 | 776 | 10 | 711 | 4.30e-111 | 356 |
MS.gene072755.t1 | MTR_3g037270 | 29.925 | 802 | 503 | 20 | 10 | 780 | 19 | 792 | 3.46e-110 | 355 |
MS.gene072755.t1 | MTR_3g071990 | 31.571 | 700 | 447 | 13 | 87 | 776 | 6 | 683 | 2.34e-109 | 350 |
MS.gene072755.t1 | MTR_3g071880 | 30.000 | 790 | 497 | 19 | 21 | 775 | 22 | 790 | 5.09e-108 | 350 |
MS.gene072755.t1 | MTR_3g071870 | 29.517 | 786 | 506 | 16 | 19 | 775 | 33 | 799 | 6.02e-108 | 350 |
MS.gene072755.t1 | MTR_3g031160 | 28.480 | 783 | 522 | 15 | 11 | 779 | 24 | 782 | 6.24e-103 | 335 |
MS.gene072755.t1 | MTR_3g037260 | 28.734 | 790 | 513 | 15 | 22 | 780 | 20 | 790 | 1.25e-102 | 335 |
MS.gene072755.t1 | MTR_4g037755 | 31.102 | 762 | 472 | 21 | 49 | 780 | 35 | 773 | 1.36e-101 | 332 |
MS.gene072755.t1 | MTR_6g015940 | 30.653 | 796 | 500 | 19 | 4 | 776 | 19 | 785 | 4.85e-100 | 328 |
MS.gene072755.t1 | MTR_8g085260 | 28.911 | 799 | 518 | 15 | 1 | 776 | 18 | 789 | 1.35e-96 | 318 |
MS.gene072755.t1 | MTR_6g053320 | 28.709 | 728 | 470 | 16 | 81 | 783 | 69 | 772 | 6.69e-92 | 305 |
MS.gene072755.t1 | MTR_4g029520 | 28.238 | 772 | 508 | 19 | 38 | 779 | 25 | 780 | 1.47e-90 | 302 |
MS.gene072755.t1 | MTR_3g498715 | 28.137 | 789 | 499 | 17 | 14 | 772 | 38 | 788 | 1.93e-90 | 302 |
MS.gene072755.t1 | MTR_5g088470 | 28.323 | 805 | 512 | 24 | 4 | 776 | 17 | 788 | 2.01e-90 | 302 |
MS.gene072755.t1 | MTR_7g085870 | 28.643 | 803 | 499 | 21 | 16 | 776 | 24 | 794 | 3.57e-90 | 302 |
MS.gene072755.t1 | MTR_5g088450 | 28.463 | 794 | 518 | 20 | 9 | 776 | 22 | 791 | 4.48e-90 | 301 |
MS.gene072755.t1 | MTR_3g031030 | 28.590 | 766 | 491 | 18 | 42 | 778 | 28 | 766 | 1.64e-88 | 296 |
MS.gene072755.t1 | MTR_3g083850 | 27.792 | 806 | 511 | 22 | 4 | 776 | 17 | 784 | 7.34e-87 | 292 |
MS.gene072755.t1 | MTR_3g110700 | 26.797 | 765 | 528 | 12 | 38 | 779 | 22 | 777 | 1.27e-86 | 291 |
MS.gene072755.t1 | MTR_5g088430 | 28.356 | 797 | 508 | 21 | 10 | 776 | 25 | 788 | 3.76e-86 | 290 |
MS.gene072755.t1 | MTR_5g088840 | 27.722 | 790 | 525 | 14 | 14 | 776 | 45 | 815 | 7.87e-84 | 285 |
MS.gene072755.t1 | MTR_5g088790 | 27.975 | 790 | 522 | 14 | 14 | 776 | 45 | 814 | 5.21e-83 | 282 |
MS.gene072755.t1 | MTR_7g053000 | 27.560 | 791 | 524 | 15 | 14 | 776 | 45 | 814 | 6.80e-81 | 276 |
MS.gene072755.t1 | MTR_7g052970 | 27.560 | 791 | 524 | 15 | 14 | 776 | 45 | 814 | 5.20e-80 | 274 |
MS.gene072755.t1 | MTR_7g052680 | 27.673 | 795 | 518 | 18 | 14 | 776 | 45 | 814 | 3.48e-79 | 272 |
MS.gene072755.t1 | MTR_3g465680 | 30.049 | 406 | 259 | 9 | 7 | 402 | 38 | 428 | 5.16e-50 | 190 |
MS.gene072755.t1 | MTR_3g465680 | 29.716 | 387 | 235 | 13 | 401 | 776 | 555 | 915 | 2.95e-38 | 154 |
MS.gene072755.t1 | MTR_7g052895 | 23.333 | 540 | 389 | 9 | 14 | 534 | 45 | 578 | 6.37e-40 | 158 |
MS.gene072755.t1 | MTR_5g083560 | 33.022 | 321 | 179 | 10 | 469 | 776 | 1 | 298 | 2.93e-37 | 143 |
MS.gene072755.t1 | MTR_1g082340 | 60.825 | 97 | 38 | 0 | 455 | 551 | 82 | 178 | 8.42e-35 | 133 |
MS.gene072755.t1 | MTR_5g061460 | 59.794 | 97 | 39 | 0 | 455 | 551 | 15 | 111 | 5.16e-34 | 128 |
MS.gene072755.t1 | MTR_1g023830 | 58.333 | 48 | 20 | 0 | 503 | 550 | 1 | 48 | 1.72e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072755.t1 | AT5G41610 | 67.754 | 797 | 244 | 7 | 1 | 786 | 1 | 795 | 0.0 | 1064 |
MS.gene072755.t1 | AT5G41610 | 67.754 | 797 | 244 | 7 | 1 | 786 | 1 | 795 | 0.0 | 1064 |
MS.gene072755.t1 | AT4G23700 | 61.739 | 805 | 287 | 7 | 6 | 789 | 3 | 807 | 0.0 | 981 |
MS.gene072755.t1 | AT4G23700 | 61.739 | 805 | 287 | 7 | 6 | 789 | 3 | 807 | 0.0 | 981 |
MS.gene072755.t1 | AT5G41610 | 67.911 | 723 | 221 | 6 | 71 | 783 | 1 | 722 | 0.0 | 959 |
MS.gene072755.t1 | AT3G17630 | 61.209 | 794 | 301 | 5 | 1 | 794 | 1 | 787 | 0.0 | 941 |
MS.gene072755.t1 | AT3G17630 | 61.209 | 794 | 301 | 5 | 1 | 794 | 1 | 787 | 0.0 | 941 |
MS.gene072755.t1 | AT1G64170 | 56.835 | 790 | 307 | 13 | 11 | 777 | 14 | 792 | 0.0 | 833 |
MS.gene072755.t1 | AT2G13620 | 48.826 | 809 | 391 | 12 | 4 | 795 | 8 | 810 | 0.0 | 726 |
MS.gene072755.t1 | AT3G53720 | 50.980 | 816 | 343 | 15 | 15 | 779 | 8 | 817 | 0.0 | 692 |
MS.gene072755.t1 | AT3G53720 | 49.666 | 749 | 320 | 15 | 82 | 779 | 2 | 744 | 0.0 | 600 |
MS.gene072755.t1 | AT1G05580 | 35.387 | 763 | 463 | 9 | 32 | 777 | 50 | 799 | 3.18e-139 | 433 |
MS.gene072755.t1 | AT2G31910 | 33.943 | 766 | 488 | 9 | 24 | 777 | 28 | 787 | 3.03e-129 | 406 |
MS.gene072755.t1 | AT1G05580 | 35.429 | 700 | 422 | 9 | 95 | 777 | 2 | 688 | 1.23e-126 | 397 |
MS.gene072755.t1 | AT1G06970 | 31.860 | 769 | 495 | 14 | 18 | 776 | 35 | 784 | 2.73e-116 | 372 |
MS.gene072755.t1 | AT2G31910 | 34.101 | 695 | 440 | 9 | 95 | 777 | 2 | 690 | 1.04e-114 | 365 |
MS.gene072755.t1 | AT2G31910 | 34.101 | 695 | 440 | 9 | 95 | 777 | 2 | 690 | 1.04e-114 | 365 |
MS.gene072755.t1 | AT2G30240 | 30.212 | 801 | 527 | 15 | 11 | 798 | 30 | 811 | 1.45e-105 | 343 |
MS.gene072755.t1 | AT5G58460 | 27.848 | 790 | 521 | 15 | 21 | 776 | 53 | 827 | 2.44e-89 | 300 |
MS.gene072755.t1 | AT5G37060 | 27.399 | 792 | 524 | 15 | 21 | 776 | 53 | 829 | 7.99e-88 | 296 |
MS.gene072755.t1 | AT5G01690 | 26.811 | 787 | 519 | 18 | 11 | 776 | 17 | 767 | 8.02e-84 | 283 |
MS.gene072755.t1 | AT5G22900 | 27.340 | 812 | 520 | 20 | 14 | 776 | 27 | 817 | 1.20e-83 | 284 |
MS.gene072755.t1 | AT3G44900 | 27.813 | 791 | 508 | 19 | 30 | 781 | 51 | 817 | 2.27e-79 | 272 |
MS.gene072755.t1 | AT3G52080 | 28.244 | 786 | 494 | 20 | 35 | 776 | 25 | 784 | 7.75e-78 | 268 |
MS.gene072755.t1 | AT2G28180 | 28.231 | 797 | 513 | 18 | 14 | 776 | 37 | 808 | 1.20e-77 | 268 |
MS.gene072755.t1 | AT1G08150 | 28.911 | 799 | 502 | 26 | 9 | 770 | 33 | 802 | 6.62e-76 | 263 |
MS.gene072755.t1 | AT1G79400 | 27.547 | 795 | 526 | 18 | 24 | 795 | 11 | 778 | 2.72e-74 | 258 |
MS.gene072755.t1 | AT5G01680 | 26.375 | 800 | 536 | 18 | 1 | 776 | 5 | 775 | 7.74e-73 | 254 |
MS.gene072755.t1 | AT1G08140 | 27.182 | 802 | 524 | 23 | 10 | 776 | 27 | 803 | 9.13e-73 | 254 |
MS.gene072755.t1 | AT2G28170 | 27.343 | 779 | 510 | 21 | 25 | 776 | 49 | 798 | 2.62e-69 | 244 |
MS.gene072755.t1 | AT3G44910 | 25.426 | 763 | 497 | 15 | 31 | 764 | 35 | 754 | 4.74e-66 | 234 |
MS.gene072755.t1 | AT1G16380 | 25.159 | 787 | 511 | 21 | 38 | 779 | 24 | 777 | 1.68e-65 | 233 |
MS.gene072755.t1 | AT5G22910 | 26.710 | 775 | 489 | 18 | 31 | 764 | 47 | 783 | 6.44e-65 | 232 |
MS.gene072755.t1 | AT3G44930 | 25.033 | 759 | 517 | 15 | 31 | 764 | 35 | 766 | 3.46e-62 | 224 |
MS.gene072755.t1 | AT3G44920 | 24.656 | 799 | 554 | 16 | 1 | 774 | 1 | 776 | 2.08e-55 | 204 |
MS.gene072755.t1 | AT1G08135 | 24.935 | 774 | 518 | 22 | 30 | 776 | 57 | 794 | 5.65e-51 | 192 |
Find 197 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGAATGTTCCTCTATTTC+TGG | 0.026331 | 5.3:-3610691 | None:intergenic |
CCTATCTTCTAAAACCTTTA+AGG | 0.099756 | 5.3:+3607663 | MS.gene072755:CDS |
ATAACTCGTGGTTGCCTTAA+AGG | 0.144813 | 5.3:-3607677 | None:intergenic |
CACATCTAATGGTGTATTTC+AGG | 0.174173 | 5.3:+3607562 | MS.gene072755:CDS |
TTCCGCATTTCTCGTATATA+TGG | 0.176867 | 5.3:+3608704 | MS.gene072755:CDS |
TTAGTGGAGTCTACTATCTT+AGG | 0.193300 | 5.3:+3610316 | MS.gene072755:CDS |
ATTTCTGGGCCAAAATTTAT+TGG | 0.194184 | 5.3:-3610676 | None:intergenic |
TGTTTCACTCTGGGTCTTCT+TGG | 0.198733 | 5.3:+3608902 | MS.gene072755:CDS |
GTCACATTTACTGCTTGTTT+TGG | 0.200333 | 5.3:+3609275 | MS.gene072755:CDS |
CACAAACTTGACTTAGTTTC+TGG | 0.208355 | 5.3:-3609931 | None:intergenic |
TGACGAGACCTTTGCCATTA+TGG | 0.210814 | 5.3:+3609544 | MS.gene072755:CDS |
ACCTCTCGGAAAATTCTTTC+AGG | 0.211875 | 5.3:-3609802 | None:intergenic |
GCTCTGGCTGTTGCCTTATC+AGG | 0.214002 | 5.3:+3608861 | MS.gene072755:CDS |
TCCTGTATTAGCTCGTATTT+TGG | 0.214796 | 5.3:+3608752 | MS.gene072755:CDS |
TGCGGAAGTATTTACATCTT+TGG | 0.224960 | 5.3:-3608688 | None:intergenic |
AATGGGGTGCCAATAAATTT+TGG | 0.231005 | 5.3:+3610667 | MS.gene072755:CDS |
CCGGAAAATGGTCCATCTTT+TGG | 0.238223 | 5.3:-3609125 | None:intergenic |
CCATTCAGGGGCTGCAATCT+TGG | 0.250984 | 5.3:+3609237 | MS.gene072755:CDS |
CGCTGACCTTTATTCCAAAA+TGG | 0.258844 | 5.3:-3609869 | None:intergenic |
ATCTGTTTCTTGTGGGTCTA+AGG | 0.262263 | 5.3:+3610518 | MS.gene072755:CDS |
CTAGCTTCTGTTCTGGCTGC+TGG | 0.264900 | 5.3:+3609038 | MS.gene072755:CDS |
CATTCAGGGGCTGCAATCTT+GGG | 0.270266 | 5.3:+3609238 | MS.gene072755:CDS |
TCACTCTGGGTCTTCTTGGC+TGG | 0.277721 | 5.3:+3608906 | MS.gene072755:CDS |
AGGCTGTTGTGGGGCAATCT+TGG | 0.285887 | 5.3:-3610618 | None:intergenic |
TGGGCCATCCATTTGAAAAT+TGG | 0.287723 | 5.3:-3608966 | None:intergenic |
CACTCTGGGTCTTCTTGGCT+GGG | 0.289867 | 5.3:+3608907 | MS.gene072755:CDS |
CCTAAATCTCTGCGGAAAAC+TGG | 0.310196 | 5.3:+3608576 | MS.gene072755:CDS |
CCCCACAACAGCCTCAGTTT+TGG | 0.313712 | 5.3:+3610627 | MS.gene072755:CDS |
GTCTCCTCTTGTTTCACTCT+GGG | 0.321265 | 5.3:+3608893 | MS.gene072755:CDS |
GACCAACATAGCTACCATTC+AGG | 0.327011 | 5.3:+3609223 | MS.gene072755:CDS |
GACCGTGAAGCTCTTGCTTA+TGG | 0.329784 | 5.3:+3610244 | MS.gene072755:CDS |
GGCTGTTGTGGGGCAATCTT+GGG | 0.336446 | 5.3:-3610617 | None:intergenic |
TTACCCTTTGCACTAGGAAT+TGG | 0.338535 | 5.3:+3608636 | MS.gene072755:CDS |
AATCTTTGTTGCTTATGAAA+TGG | 0.339065 | 5.3:-3610046 | None:intergenic |
ATCTTTGTTGCTTATGAAAT+GGG | 0.347722 | 5.3:-3610045 | None:intergenic |
TAGTGGAGTCTACTATCTTA+GGG | 0.348765 | 5.3:+3610317 | MS.gene072755:CDS |
TCCTGCAATCTGTTTCTTGT+GGG | 0.356297 | 5.3:+3610511 | MS.gene072755:CDS |
ATTGGAATTCATGCTATGTT+TGG | 0.358926 | 5.3:+3609077 | MS.gene072755:CDS |
TTTAATGAGTCTTTAGTGCT+TGG | 0.361083 | 5.3:+3609344 | MS.gene072755:CDS |
CATCGACCGGCTCACCTTCA+TGG | 0.361582 | 5.3:-3608995 | None:intergenic |
GCTCACCTTCATGGCATTGT+TGG | 0.366554 | 5.3:-3608986 | None:intergenic |
AGGATTCTTGCCTGCTTCCA+TGG | 0.369527 | 5.3:+3609692 | MS.gene072755:CDS |
GTGAATGTTCCTCTATTTCT+GGG | 0.373195 | 5.3:-3610690 | None:intergenic |
CGGTGAATTGGCCTGTGCTC+TGG | 0.377041 | 5.3:+3610546 | MS.gene072755:CDS |
CTCACCTTCATGGCATTGTT+GGG | 0.377633 | 5.3:-3608985 | None:intergenic |
TGCTACACTAGCTTCTGTTC+TGG | 0.378384 | 5.3:+3609031 | MS.gene072755:CDS |
CCACCAACAGGTCCTAGTTC+CGG | 0.379805 | 5.3:-3610583 | None:intergenic |
TCCACAAGAGCACCGGAAAA+TGG | 0.381554 | 5.3:-3609137 | None:intergenic |
CCATTAGATGTGGACTTCAT+TGG | 0.383582 | 5.3:-3607551 | None:intergenic |
CTACTTGGGCCATCAGCATT+TGG | 0.384880 | 5.3:+3608438 | MS.gene072755:CDS |
TCTAAGGCCAACCGGTGAAT+TGG | 0.387525 | 5.3:+3610534 | MS.gene072755:CDS |
AGTCTCCTCTTGTTTCACTC+TGG | 0.393763 | 5.3:+3608892 | MS.gene072755:CDS |
CCAATGAAGTCCACATCTAA+TGG | 0.402085 | 5.3:+3607551 | MS.gene072755:CDS |
CACCAACAGGTCCTAGTTCC+GGG | 0.402709 | 5.3:-3610582 | None:intergenic |
CTTTGCCATTATGGTTCTCA+TGG | 0.418044 | 5.3:+3609553 | MS.gene072755:CDS |
CCATGTTATCGTGGCATTTG+AGG | 0.418794 | 5.3:+3609904 | MS.gene072755:CDS |
TAGCTTCTGTTCTGGCTGCT+GGG | 0.419739 | 5.3:+3609039 | MS.gene072755:CDS |
TGGGTCTTCTTGGCTGGGTG+TGG | 0.426319 | 5.3:+3608912 | MS.gene072755:CDS |
TCCGCATTTCTCGTATATAT+GGG | 0.426340 | 5.3:+3608705 | MS.gene072755:CDS |
TTCCTGCAATCTGTTTCTTG+TGG | 0.429638 | 5.3:+3610510 | MS.gene072755:CDS |
TTTGCTAGAGTATCTAATAC+TGG | 0.434840 | 5.3:-3608507 | None:intergenic |
GGGTTTGTCACAGATGCTAT+TGG | 0.438485 | 5.3:+3609059 | MS.gene072755:CDS |
CACCAAAACTGAGGCTGTTG+TGG | 0.445584 | 5.3:-3610629 | None:intergenic |
CTCGCTTCTTTCCAGAGCAC+AGG | 0.449554 | 5.3:-3610557 | None:intergenic |
AGCCTGGATCCTTCTTGCTC+TGG | 0.452160 | 5.3:+3608845 | MS.gene072755:CDS |
CTTGATGAATAGTAAAGGCT+TGG | 0.460634 | 5.3:+3609370 | MS.gene072755:CDS |
AGCAGGCAAGAATCCTCAAC+TGG | 0.461387 | 5.3:-3609685 | None:intergenic |
AGACTGGCTATTGCCTGATA+AGG | 0.462035 | 5.3:-3608874 | None:intergenic |
CCCCTGAATGGTAGCTATGT+TGG | 0.463640 | 5.3:-3609225 | None:intergenic |
TCTTGATTATGCACTTCCCT+TGG | 0.466853 | 5.3:+3607595 | MS.gene072755:CDS |
ATCTAATACTGGAAGACTCT+GGG | 0.469799 | 5.3:-3608496 | None:intergenic |
ACCCACAAGAAACAGATTGC+AGG | 0.478736 | 5.3:-3610512 | None:intergenic |
TTCATGAATGTTAGTCATTG+AGG | 0.479059 | 5.3:-3609975 | None:intergenic |
GCCAAAATACGAGCTAATAC+AGG | 0.479170 | 5.3:-3608753 | None:intergenic |
ACCAAAACTGAGGCTGTTGT+GGG | 0.485006 | 5.3:-3610628 | None:intergenic |
TATCTAATACTGGAAGACTC+TGG | 0.485208 | 5.3:-3608497 | None:intergenic |
TTTGTTGATCGCGGACTTGG+TGG | 0.486407 | 5.3:+3610154 | MS.gene072755:CDS |
AAAATAGAGGATCTTGTGTC+TGG | 0.487583 | 5.3:+3609161 | MS.gene072755:CDS |
AGGACCTGTTGGTGGCTTGT+TGG | 0.487601 | 5.3:+3610591 | MS.gene072755:CDS |
TCTTGTAGTCACAAGGGGAC+TGG | 0.489601 | 5.3:+3607640 | MS.gene072755:CDS |
CTCCATAAGCAAGAGCTTCA+CGG | 0.493215 | 5.3:-3610246 | None:intergenic |
CCAAGATTGCAGCCCCTGAA+TGG | 0.496927 | 5.3:-3609237 | None:intergenic |
TGACAGGGAGGAATACTACT+TGG | 0.497932 | 5.3:+3608423 | MS.gene072755:intron |
GCGGATAGTAGCAACTGTTT+CGG | 0.498540 | 5.3:-3610479 | None:intergenic |
GAGAGCCATGAGAACCATAA+TGG | 0.499751 | 5.3:-3609558 | None:intergenic |
CCACTTGACACAAAATAAAG+TGG | 0.501014 | 5.3:-3609194 | None:intergenic |
CAGAGCACAGGCCAATTCAC+CGG | 0.503276 | 5.3:-3610545 | None:intergenic |
CATAAGCAACAAAGATTAGA+CGG | 0.503654 | 5.3:+3610052 | MS.gene072755:CDS |
TTATTCCGTCCAAATGCTGA+TGG | 0.503922 | 5.3:-3608447 | None:intergenic |
ATGACTTCGAATACTACAGC+TGG | 0.505481 | 5.3:+3607512 | MS.gene072755:CDS |
AGCCAGAGCAAGAAGGATCC+AGG | 0.506866 | 5.3:-3608847 | None:intergenic |
GATACCAACAAGCCACCAAC+AGG | 0.508371 | 5.3:-3610595 | None:intergenic |
CTTGTGGGTCTAAGGCCAAC+CGG | 0.508522 | 5.3:+3610526 | MS.gene072755:CDS |
GCTCGTATGGCCGAGCACCC+TGG | 0.509209 | 5.3:+3610268 | MS.gene072755:CDS |
GAGGTCCTCATCAATACTAA+TGG | 0.511434 | 5.3:+3609820 | MS.gene072755:CDS |
CATGACCACTCCTCTTGTGA+TGG | 0.513677 | 5.3:+3609592 | MS.gene072755:CDS |
ACATCTAATGGTGTATTTCA+GGG | 0.514947 | 5.3:+3607563 | MS.gene072755:CDS |
AGAAGCGAGTGCCCGGAACT+AGG | 0.517785 | 5.3:+3610571 | MS.gene072755:CDS |
TTAACCACTAATCTTATGCC+AGG | 0.520099 | 5.3:-3610286 | None:intergenic |
ATTCCTTGCACCATGGAAGC+AGG | 0.522699 | 5.3:-3609702 | None:intergenic |
TAATCTTATGCCAGGGTGCT+CGG | 0.524360 | 5.3:-3610278 | None:intergenic |
GCACCCTGGCATAAGATTAG+TGG | 0.525604 | 5.3:+3610282 | MS.gene072755:CDS |
TCTTGCTTATGGAGCTCGTA+TGG | 0.526592 | 5.3:+3610255 | MS.gene072755:CDS |
TCTGGAAAGAAGCGAGTGCC+CGG | 0.527396 | 5.3:+3610564 | MS.gene072755:CDS |
ATTGAGGAGATTGCTACCAT+TGG | 0.529048 | 5.3:-3609959 | None:intergenic |
TTCGATCTTTACCGATGTTG+AGG | 0.531387 | 5.3:-3609406 | None:intergenic |
GATGTGGACTTCATTGGTGG+CGG | 0.532120 | 5.3:-3607545 | None:intergenic |
ATGTGGACTTCATTGGTGGC+GGG | 0.533788 | 5.3:-3607544 | None:intergenic |
GTAGATAACGGAGTCATCAC+TGG | 0.534704 | 5.3:-3610431 | None:intergenic |
GAACCAATTCCTAGTGCAAA+GGG | 0.535243 | 5.3:-3608639 | None:intergenic |
ATAAGCTTACCCTTTGCACT+AGG | 0.536559 | 5.3:+3608630 | MS.gene072755:CDS |
GGATTCTTGATGAATAGTAA+AGG | 0.540380 | 5.3:+3609365 | MS.gene072755:CDS |
ACCAACATAGCTACCATTCA+GGG | 0.542167 | 5.3:+3609224 | MS.gene072755:CDS |
CCTCAAATGCCACGATAACA+TGG | 0.547459 | 5.3:-3609904 | None:intergenic |
GCCTTGTTCTTGTAGTCACA+AGG | 0.547956 | 5.3:+3607633 | MS.gene072755:CDS |
TGATGCAACAGTATCACAAT+GGG | 0.550837 | 5.3:+3610650 | MS.gene072755:CDS |
AACCACCAGTGTCGGACGAA+TGG | 0.551719 | 5.3:+3608791 | MS.gene072755:CDS |
TTAGATGTGGACTTCATTGG+TGG | 0.555123 | 5.3:-3607548 | None:intergenic |
TCGAGTCCTTGCAATTGCTA+TGG | 0.555145 | 5.3:+3608602 | MS.gene072755:CDS |
TGCTCTTGTGGAGAAAATAG+AGG | 0.555546 | 5.3:+3609148 | MS.gene072755:CDS |
TAAATCAATCTCAGAGGATG+AGG | 0.557056 | 5.3:+3610378 | MS.gene072755:CDS |
TTGCCTGCTTCCATGGTGCA+AGG | 0.557230 | 5.3:+3609699 | MS.gene072755:CDS |
TGCAGCTCTCTTTCTTTCAG+CGG | 0.559136 | 5.3:-3610011 | None:intergenic |
GAGCATGCACCATGCTCAGT+TGG | 0.559655 | 5.3:+3610127 | MS.gene072755:CDS |
TAGTATTGATGAGGACCTCT+CGG | 0.560717 | 5.3:-3609816 | None:intergenic |
CACAAGAGGAGTGGTCATGA+AGG | 0.561511 | 5.3:-3609588 | None:intergenic |
GTCCTTGCAATTGCTATGGT+CGG | 0.561733 | 5.3:+3608606 | MS.gene072755:CDS |
ATTCAGGGGCTGCAATCTTG+GGG | 0.562588 | 5.3:+3609239 | MS.gene072755:CDS |
ACAAATACAAAACAGTTGAA+AGG | 0.563836 | 5.3:+3609648 | MS.gene072755:CDS |
CAGTTAATGATGTAGCAGCC+TGG | 0.564394 | 5.3:+3608829 | MS.gene072755:CDS |
ATAGAAAGAATATGAGGCCA+AGG | 0.569815 | 5.3:-3608530 | None:intergenic |
TCAAGTTTGTGTCCGTCCAA+TGG | 0.570879 | 5.3:+3609943 | MS.gene072755:CDS |
CCGGAACTAGGACCTGTTGG+TGG | 0.571290 | 5.3:+3610583 | MS.gene072755:CDS |
CCATCCATTTGAAAATTGGA+AGG | 0.571739 | 5.3:-3608962 | None:intergenic |
TGAAAATTGGAAGGACAATG+AGG | 0.575141 | 5.3:-3608953 | None:intergenic |
CTGAAATACACCATTAGATG+TGG | 0.575467 | 5.3:-3607561 | None:intergenic |
TTCCGACCATAGCAATTGCA+AGG | 0.578562 | 5.3:-3608608 | None:intergenic |
CTGTACCATTAGTATTGATG+AGG | 0.579134 | 5.3:-3609825 | None:intergenic |
GCATATCTGCAAAATAGCCA+AGG | 0.582144 | 5.3:-3607612 | None:intergenic |
ACGAATGGCTATGTCGGCTG+CGG | 0.582174 | 5.3:+3608806 | MS.gene072755:CDS |
TGTCGGACGAATGGCTATGT+CGG | 0.582361 | 5.3:+3608800 | MS.gene072755:CDS |
GCACAGGCCAATTCACCGGT+TGG | 0.584280 | 5.3:-3610541 | None:intergenic |
TGCCCGGAACTAGGACCTGT+TGG | 0.584853 | 5.3:+3610580 | MS.gene072755:CDS |
CAACATCGGTAAAGATCGAA+AGG | 0.586587 | 5.3:+3609409 | MS.gene072755:CDS |
ACAATGCCATGAAGGTGAGC+CGG | 0.586955 | 5.3:+3608989 | MS.gene072755:CDS |
AAGACCCAGAGTGAAACAAG+AGG | 0.587504 | 5.3:-3608897 | None:intergenic |
TTGTGATGGCTGCGTATAAG+CGG | 0.591008 | 5.3:+3609606 | MS.gene072755:CDS |
GAATTAATTGTCCTCAACAT+CGG | 0.591363 | 5.3:+3609395 | MS.gene072755:CDS |
GTGATGCAACAGTATCACAA+TGG | 0.594247 | 5.3:+3610649 | MS.gene072755:CDS |
CATATGTATAACTCATCGAC+CGG | 0.594550 | 5.3:-3609008 | None:intergenic |
TTAGATACTCTAGCAAACCT+TGG | 0.596516 | 5.3:+3608513 | MS.gene072755:CDS |
TTGGGCCATCAGCATTTGGA+CGG | 0.598018 | 5.3:+3608442 | MS.gene072755:CDS |
CATAGCCATTCGTCCGACAC+TGG | 0.598072 | 5.3:-3608796 | None:intergenic |
CTTGTTCTTGTAGTCACAAG+GGG | 0.604948 | 5.3:+3607635 | MS.gene072755:CDS |
GAGATTACCAGCGTTGACGT+TGG | 0.606948 | 5.3:+3610340 | MS.gene072755:CDS |
CCTTGTTCTTGTAGTCACAA+GGG | 0.607649 | 5.3:+3607634 | MS.gene072755:CDS |
ATAGAGGAACATTCACATGA+AGG | 0.614384 | 5.3:+3610697 | MS.gene072755:CDS |
CATGAGAACCATAATGGCAA+AGG | 0.616978 | 5.3:-3609552 | None:intergenic |
AAGGGAAGTGCATAATCAAG+AGG | 0.617588 | 5.3:-3607593 | None:intergenic |
CGAACCAATTCCTAGTGCAA+AGG | 0.618466 | 5.3:-3608640 | None:intergenic |
ATGGCCCAACAATGCCATGA+AGG | 0.621341 | 5.3:+3608981 | MS.gene072755:CDS |
CACTTGACACAAAATAAAGT+GGG | 0.625867 | 5.3:-3609193 | None:intergenic |
ATACTGGAAGACTCTGGGGT+GGG | 0.626706 | 5.3:-3608491 | None:intergenic |
CGCAGCCATCACAAGAGGAG+TGG | 0.626789 | 5.3:-3609597 | None:intergenic |
AGGCAACAGCCAGAGCAAGA+AGG | 0.627732 | 5.3:-3608854 | None:intergenic |
AGAATCTCTGCAATAACTCG+TGG | 0.627914 | 5.3:-3607689 | None:intergenic |
AGGAGATTGCTACCATTGGA+CGG | 0.628015 | 5.3:-3609955 | None:intergenic |
TGAGTCTCCAACGTCAACGC+TGG | 0.630640 | 5.3:-3610347 | None:intergenic |
CCCTTGTGACTACAAGAACA+AGG | 0.631580 | 5.3:-3607634 | None:intergenic |
TTATACGCAGCCATCACAAG+AGG | 0.632902 | 5.3:-3609602 | None:intergenic |
GACAGGGAGGAATACTACTT+GGG | 0.634846 | 5.3:+3608424 | MS.gene072755:intron |
TCGATCAAGTTTATCACCGA+CGG | 0.637154 | 5.3:-3609728 | None:intergenic |
GTCGGTGATAAACTTGATCG+AGG | 0.639100 | 5.3:+3609730 | MS.gene072755:CDS |
AAAATGCAGACAGCCAGTTG+AGG | 0.639300 | 5.3:+3609672 | MS.gene072755:CDS |
AAATCTCTGCGGAAAACTGG+AGG | 0.642921 | 5.3:+3608579 | MS.gene072755:CDS |
AACTTGATCGAGGCTTCAAG+AGG | 0.647075 | 5.3:+3609740 | MS.gene072755:CDS |
AATACTGGAAGACTCTGGGG+TGG | 0.647969 | 5.3:-3608492 | None:intergenic |
CATATCTGCAAAATAGCCAA+GGG | 0.651594 | 5.3:-3607611 | None:intergenic |
TAACCACTAATCTTATGCCA+GGG | 0.652496 | 5.3:-3610285 | None:intergenic |
ACGGAATATTCCTTGCACCA+TGG | 0.661019 | 5.3:-3609709 | None:intergenic |
AAGTAATGTTTCTTACTGTG+TGG | 0.666456 | 5.3:+3610195 | MS.gene072755:CDS |
AGTGGAGTCTACTATCTTAG+GGG | 0.666718 | 5.3:+3610318 | MS.gene072755:CDS |
AGAGTGAAACAAGAGGAGAC+TGG | 0.668111 | 5.3:-3608890 | None:intergenic |
TGGTGCAAGGAATATTCCGT+CGG | 0.673421 | 5.3:+3609712 | MS.gene072755:CDS |
AGGGAAGTGCATAATCAAGA+GGG | 0.673970 | 5.3:-3607592 | None:intergenic |
AGATTCTGACCATGTTATCG+TGG | 0.676472 | 5.3:+3609895 | MS.gene072755:CDS |
CCAAAACTGAGGCTGTTGTG+GGG | 0.680433 | 5.3:-3610627 | None:intergenic |
AGCCATTCGTCCGACACTGG+TGG | 0.686496 | 5.3:-3608793 | None:intergenic |
GACGTTGGAGACTCATCTAG+CGG | 0.691565 | 5.3:+3610355 | MS.gene072755:CDS |
TCCCATATATACGAGAAATG+CGG | 0.695145 | 5.3:-3608706 | None:intergenic |
TCTAATACTGGAAGACTCTG+GGG | 0.699276 | 5.3:-3608495 | None:intergenic |
TAGCGGTAAATCAATCTCAG+AGG | 0.700624 | 5.3:+3610372 | MS.gene072755:CDS |
CTGTTGCATCACCAAAACTG+AGG | 0.719100 | 5.3:-3610638 | None:intergenic |
GATTGCAGGAATTAAACTCG+CGG | 0.722368 | 5.3:-3610498 | None:intergenic |
AGTTGGATCCTAAATCTCTG+CGG | 0.723019 | 5.3:+3608568 | MS.gene072755:CDS |
CCAACATAGCTACCATTCAG+GGG | 0.726005 | 5.3:+3609225 | MS.gene072755:CDS |
GATGCAACAGTATCACAATG+GGG | 0.828892 | 5.3:+3610651 | MS.gene072755:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAACTTCATTATGA+CGG | - | chr5.3:3607752-3607771 | None:intergenic | 15.0% |
!!! | AGTATATGTTTTATTTTAGA+AGG | + | chr5.3:3608335-3608354 | MS.gene072755:intron | 15.0% |
!!! | GCTTATTTAATTTTTCTTTT+TGG | + | chr5.3:3607807-3607826 | MS.gene072755:intron | 15.0% |
!!! | GTATATGTTTTATTTTAGAA+GGG | + | chr5.3:3608336-3608355 | MS.gene072755:intron | 15.0% |
!! | CTAAAAATAGAAAGAATATG+AGG | - | chr5.3:3608539-3608558 | None:intergenic | 20.0% |
!!! | ATATTCTTTCTATTTTTAGC+AGG | + | chr5.3:3608540-3608559 | MS.gene072755:CDS | 20.0% |
!!! | ATTTTTCTTTTTGGTTCTAA+AGG | + | chr5.3:3607816-3607835 | MS.gene072755:intron | 20.0% |
! | AACTAACTAGTTAATGTATG+GGG | + | chr5.3:3607849-3607868 | MS.gene072755:intron | 25.0% |
! | AATCCCTATATAGTATAATC+TGG | + | chr5.3:3609457-3609476 | MS.gene072755:intron | 25.0% |
! | ACAAATACAAAACAGTTGAA+AGG | + | chr5.3:3609648-3609667 | MS.gene072755:CDS | 25.0% |
! | GAACTAACTAGTTAATGTAT+GGG | + | chr5.3:3607848-3607867 | MS.gene072755:intron | 25.0% |
! | GTACAGAAAGTAAGAAAAAA+CGG | + | chr5.3:3609842-3609861 | MS.gene072755:CDS | 25.0% |
! | TACAGAAAGTAAGAAAAAAC+GGG | + | chr5.3:3609843-3609862 | MS.gene072755:CDS | 25.0% |
! | TTGATTCAAGAACATTGAAT+TGG | - | chr5.3:3608109-3608128 | None:intergenic | 25.0% |
!! | AATCTTTGTTGCTTATGAAA+TGG | - | chr5.3:3610049-3610068 | None:intergenic | 25.0% |
!! | ATCTTTGTTGCTTATGAAAT+GGG | - | chr5.3:3610048-3610067 | None:intergenic | 25.0% |
!! | TATTTTCTCTTCGTAGATAA+CGG | - | chr5.3:3610446-3610465 | None:intergenic | 25.0% |
!!! | AGCTTTTGTTTTTGGAATTT+TGG | + | chr5.3:3609100-3609119 | MS.gene072755:CDS | 25.0% |
!!! | ATGTTTTATTTTAGAAGGGA+GGG | + | chr5.3:3608340-3608359 | MS.gene072755:intron | 25.0% |
!!! | ATTTTCGCTTTGTTAACAAA+AGG | + | chr5.3:3610098-3610117 | MS.gene072755:CDS | 25.0% |
!!! | TATGTTTTATTTTAGAAGGG+AGG | + | chr5.3:3608339-3608358 | MS.gene072755:intron | 25.0% |
!!! | TATTAGAGTTGATTTGAGTT+TGG | - | chr5.3:3608048-3608067 | None:intergenic | 25.0% |
!!! | TTTTCGCTTTGTTAACAAAA+GGG | + | chr5.3:3610099-3610118 | MS.gene072755:CDS | 25.0% |
AAGTAATGTTTCTTACTGTG+TGG | + | chr5.3:3610195-3610214 | MS.gene072755:CDS | 30.0% | |
ACATCTAATGGTGTATTTCA+GGG | + | chr5.3:3607563-3607582 | MS.gene072755:CDS | 30.0% | |
ATTGGAATTCATGCTATGTT+TGG | + | chr5.3:3609077-3609096 | MS.gene072755:CDS | 30.0% | |
CACTTGACACAAAATAAAGT+GGG | - | chr5.3:3609196-3609215 | None:intergenic | 30.0% | |
CATAAGCAACAAAGATTAGA+CGG | + | chr5.3:3610052-3610071 | MS.gene072755:CDS | 30.0% | |
GAATTAATTGTCCTCAACAT+CGG | + | chr5.3:3609395-3609414 | MS.gene072755:CDS | 30.0% | |
GGAACTAACTAGTTAATGTA+TGG | + | chr5.3:3607847-3607866 | MS.gene072755:intron | 30.0% | |
GGACCAGATTATACTATATA+GGG | - | chr5.3:3609463-3609482 | None:intergenic | 30.0% | |
GGATTCTTGATGAATAGTAA+AGG | + | chr5.3:3609365-3609384 | MS.gene072755:CDS | 30.0% | |
TATGATTGTAATGTGTGTCA+TGG | + | chr5.3:3608388-3608407 | MS.gene072755:intron | 30.0% | |
TATTACATAGAGCTTGAATG+AGG | + | chr5.3:3608295-3608314 | MS.gene072755:intron | 30.0% | |
TGGACCAGATTATACTATAT+AGG | - | chr5.3:3609464-3609483 | None:intergenic | 30.0% | |
TTCATGAATGTTAGTCATTG+AGG | - | chr5.3:3609978-3609997 | None:intergenic | 30.0% | |
TTTAATGAGTCTTTAGTGCT+TGG | + | chr5.3:3609344-3609363 | MS.gene072755:CDS | 30.0% | |
TTTGCTTGTCTGAAAAGAAA+AGG | - | chr5.3:3607926-3607945 | None:intergenic | 30.0% | |
! | ATTTCTGGGCCAAAATTTAT+TGG | - | chr5.3:3610679-3610698 | None:intergenic | 30.0% |
! | TTGTCCTTCCAATTTTCAAA+TGG | + | chr5.3:3608958-3608977 | MS.gene072755:CDS | 30.0% |
! | TTTGCTAGAGTATCTAATAC+TGG | - | chr5.3:3608510-3608529 | None:intergenic | 30.0% |
! | TTTTCAGCTTAAATTCTGCA+AGG | - | chr5.3:3610408-3610427 | None:intergenic | 30.0% |
!! | CCTATCTTCTAAAACCTTTA+AGG | + | chr5.3:3607663-3607682 | MS.gene072755:CDS | 30.0% |
!! | TCACATTTACTGCTTGTTTT+GGG | + | chr5.3:3609276-3609295 | MS.gene072755:CDS | 30.0% |
!! | TTGGTTCTAAAGGATTTCTT+TGG | + | chr5.3:3607826-3607845 | MS.gene072755:intron | 30.0% |
!!! | AGTGGTTAATCACTTTTTAG+TGG | + | chr5.3:3610300-3610319 | MS.gene072755:CDS | 30.0% |
!!! | ATGTTTGGAGCTTTTGTTTT+TGG | + | chr5.3:3609092-3609111 | MS.gene072755:CDS | 30.0% |
!!! | CCTTAAAGGTTTTAGAAGAT+AGG | - | chr5.3:3607666-3607685 | None:intergenic | 30.0% |
!!! | GGTGGTTAAAAGTTTTAACT+CGG | - | chr5.3:3608778-3608797 | None:intergenic | 30.0% |
AAAATAGAGGATCTTGTGTC+TGG | + | chr5.3:3609161-3609180 | MS.gene072755:CDS | 35.0% | |
AAACCACTTTCTATTCTGAG+AGG | + | chr5.3:3608186-3608205 | MS.gene072755:intron | 35.0% | |
ACAAAAATTCCAACTGAGCA+TGG | - | chr5.3:3610139-3610158 | None:intergenic | 35.0% | |
ACTCTCATTGTTGTATTGCA+TGG | - | chr5.3:3607966-3607985 | None:intergenic | 35.0% | |
AGGTAGCAATAAGACTCATA+GGG | + | chr5.3:3607886-3607905 | MS.gene072755:intron | 35.0% | |
ATAGAAAGAATATGAGGCCA+AGG | - | chr5.3:3608533-3608552 | None:intergenic | 35.0% | |
ATAGAGGAACATTCACATGA+AGG | + | chr5.3:3610697-3610716 | MS.gene072755:CDS | 35.0% | |
ATCTAATACTGGAAGACTCT+GGG | - | chr5.3:3608499-3608518 | None:intergenic | 35.0% | |
ATTGTTGTATTGCATGGCAA+TGG | - | chr5.3:3607960-3607979 | None:intergenic | 35.0% | |
CACAAACTTGACTTAGTTTC+TGG | - | chr5.3:3609934-3609953 | None:intergenic | 35.0% | |
CACATCTAATGGTGTATTTC+AGG | + | chr5.3:3607562-3607581 | MS.gene072755:CDS | 35.0% | |
CATATCTGCAAAATAGCCAA+GGG | - | chr5.3:3607614-3607633 | None:intergenic | 35.0% | |
CATATGTATAACTCATCGAC+CGG | - | chr5.3:3609011-3609030 | None:intergenic | 35.0% | |
CCACTTGACACAAAATAAAG+TGG | - | chr5.3:3609197-3609216 | None:intergenic | 35.0% | |
CCATCCATTTGAAAATTGGA+AGG | - | chr5.3:3608965-3608984 | None:intergenic | 35.0% | |
CTGAAATACACCATTAGATG+TGG | - | chr5.3:3607564-3607583 | None:intergenic | 35.0% | |
CTTGATGAATAGTAAAGGCT+TGG | + | chr5.3:3609370-3609389 | MS.gene072755:CDS | 35.0% | |
TAAATCAATCTCAGAGGATG+AGG | + | chr5.3:3610378-3610397 | MS.gene072755:CDS | 35.0% | |
TAACCACTAATCTTATGCCA+GGG | - | chr5.3:3610288-3610307 | None:intergenic | 35.0% | |
TAGTGGAGTCTACTATCTTA+GGG | + | chr5.3:3610317-3610336 | MS.gene072755:CDS | 35.0% | |
TATCCATCACAGTGATTCAT+AGG | - | chr5.3:3609496-3609515 | None:intergenic | 35.0% | |
TATCTAATACTGGAAGACTC+TGG | - | chr5.3:3608500-3608519 | None:intergenic | 35.0% | |
TATTTGATGTATGCATCTGC+AGG | + | chr5.3:3609514-3609533 | MS.gene072755:intron | 35.0% | |
TCCCATATATACGAGAAATG+CGG | - | chr5.3:3608709-3608728 | None:intergenic | 35.0% | |
TCCGCATTTCTCGTATATAT+GGG | + | chr5.3:3608705-3608724 | MS.gene072755:CDS | 35.0% | |
TGAAAATTGGAAGGACAATG+AGG | - | chr5.3:3608956-3608975 | None:intergenic | 35.0% | |
TGATGCAACAGTATCACAAT+GGG | + | chr5.3:3610650-3610669 | MS.gene072755:CDS | 35.0% | |
TGTGAATGTTCCTCTATTTC+TGG | - | chr5.3:3610694-3610713 | None:intergenic | 35.0% | |
TTAACCACTAATCTTATGCC+AGG | - | chr5.3:3610289-3610308 | None:intergenic | 35.0% | |
TTAGATACTCTAGCAAACCT+TGG | + | chr5.3:3608513-3608532 | MS.gene072755:CDS | 35.0% | |
TTAGTGGAGTCTACTATCTT+AGG | + | chr5.3:3610316-3610335 | MS.gene072755:CDS | 35.0% | |
TTCCGCATTTCTCGTATATA+TGG | + | chr5.3:3608704-3608723 | MS.gene072755:CDS | 35.0% | |
! | AAACTTTTAACCACCAGTGT+CGG | + | chr5.3:3608783-3608802 | MS.gene072755:CDS | 35.0% |
! | CCTTCCAATTTTCAAATGGA+TGG | + | chr5.3:3608962-3608981 | MS.gene072755:CDS | 35.0% |
! | GTCACATTTACTGCTTGTTT+TGG | + | chr5.3:3609275-3609294 | MS.gene072755:CDS | 35.0% |
! | GTGAATGTTCCTCTATTTCT+GGG | - | chr5.3:3610693-3610712 | None:intergenic | 35.0% |
! | GTTGGAATTTTTGTTGATCG+CGG | + | chr5.3:3610145-3610164 | MS.gene072755:CDS | 35.0% |
! | TCCTGTATTAGCTCGTATTT+TGG | + | chr5.3:3608752-3608771 | MS.gene072755:CDS | 35.0% |
! | TTGATTTGAGTTTGGACAAG+CGG | - | chr5.3:3608040-3608059 | None:intergenic | 35.0% |
!! | AAATTTTGGCCCAGAAATAG+AGG | + | chr5.3:3610681-3610700 | MS.gene072755:CDS | 35.0% |
!! | AATGGGGTGCCAATAAATTT+TGG | + | chr5.3:3610667-3610686 | MS.gene072755:CDS | 35.0% |
!! | CTGTACCATTAGTATTGATG+AGG | - | chr5.3:3609828-3609847 | None:intergenic | 35.0% |
!! | TGCGGAAGTATTTACATCTT+TGG | - | chr5.3:3608691-3608710 | None:intergenic | 35.0% |
!!! | AAACCTTTGCGCTTTTTTAG+AGG | - | chr5.3:3608265-3608284 | None:intergenic | 35.0% |
!!! | AACCTTTGCGCTTTTTTAGA+GGG | - | chr5.3:3608264-3608283 | None:intergenic | 35.0% |
!!! | ATTTTTAGCAGGCATAGAGT+TGG | + | chr5.3:3608551-3608570 | MS.gene072755:CDS | 35.0% |
!!! | CCACTTTATTTTGTGTCAAG+TGG | + | chr5.3:3609194-3609213 | MS.gene072755:CDS | 35.0% |
!!! | CTTGTTTTGGGAAGATTGTT+GGG | + | chr5.3:3609288-3609307 | MS.gene072755:CDS | 35.0% |
!!! | GGAATTTTGGTTCCAAAAGA+TGG | + | chr5.3:3609113-3609132 | MS.gene072755:CDS | 35.0% |
!!! | TTTATTTTAGAAGGGAGGGA+GGG | + | chr5.3:3608344-3608363 | MS.gene072755:intron | 35.0% |
!!! | TTTTATTTTAGAAGGGAGGG+AGG | + | chr5.3:3608343-3608362 | MS.gene072755:intron | 35.0% |
ACCAACATAGCTACCATTCA+GGG | + | chr5.3:3609224-3609243 | MS.gene072755:CDS | 40.0% | |
ACCTCTCGGAAAATTCTTTC+AGG | - | chr5.3:3609805-3609824 | None:intergenic | 40.0% | |
AGAATCTCTGCAATAACTCG+TGG | - | chr5.3:3607692-3607711 | None:intergenic | 40.0% | |
AGATTCTGACCATGTTATCG+TGG | + | chr5.3:3609895-3609914 | MS.gene072755:CDS | 40.0% | |
AGTGGAGTCTACTATCTTAG+GGG | + | chr5.3:3610318-3610337 | MS.gene072755:CDS | 40.0% | |
AGTTGGATCCTAAATCTCTG+CGG | + | chr5.3:3608568-3608587 | MS.gene072755:CDS | 40.0% | |
ATAACTCGTGGTTGCCTTAA+AGG | - | chr5.3:3607680-3607699 | None:intergenic | 40.0% | |
ATAAGCTTACCCTTTGCACT+AGG | + | chr5.3:3608630-3608649 | MS.gene072755:CDS | 40.0% | |
ATGACTTCGAATACTACAGC+TGG | + | chr5.3:3607512-3607531 | MS.gene072755:CDS | 40.0% | |
ATGGGGAAACTCTGATTTAG+AGG | + | chr5.3:3607866-3607885 | MS.gene072755:intron | 40.0% | |
ATTGAGGAGATTGCTACCAT+TGG | - | chr5.3:3609962-3609981 | None:intergenic | 40.0% | |
ATTGTAATGTGTGTCATGGC+TGG | + | chr5.3:3608392-3608411 | MS.gene072755:intron | 40.0% | |
CAACATCGGTAAAGATCGAA+AGG | + | chr5.3:3609409-3609428 | MS.gene072755:CDS | 40.0% | |
CATAGAGCTTGAATGAGGAA+AGG | + | chr5.3:3608300-3608319 | MS.gene072755:intron | 40.0% | |
CATGAGAACCATAATGGCAA+AGG | - | chr5.3:3609555-3609574 | None:intergenic | 40.0% | |
CCAATGAAGTCCACATCTAA+TGG | + | chr5.3:3607551-3607570 | MS.gene072755:CDS | 40.0% | |
CCATTAGATGTGGACTTCAT+TGG | - | chr5.3:3607554-3607573 | None:intergenic | 40.0% | |
CCTTGTTCTTGTAGTCACAA+GGG | + | chr5.3:3607634-3607653 | MS.gene072755:CDS | 40.0% | |
CGCTGACCTTTATTCCAAAA+TGG | - | chr5.3:3609872-3609891 | None:intergenic | 40.0% | |
CTTCCTCTCAGAATAGAAAG+TGG | - | chr5.3:3608192-3608211 | None:intergenic | 40.0% | |
CTTGTTCTTGTAGTCACAAG+GGG | + | chr5.3:3607635-3607654 | MS.gene072755:CDS | 40.0% | |
CTTTGCCATTATGGTTCTCA+TGG | + | chr5.3:3609553-3609572 | MS.gene072755:CDS | 40.0% | |
GAACCAATTCCTAGTGCAAA+GGG | - | chr5.3:3608642-3608661 | None:intergenic | 40.0% | |
GAGGTAGCAATAAGACTCAT+AGG | + | chr5.3:3607885-3607904 | MS.gene072755:intron | 40.0% | |
GAGGTCCTCATCAATACTAA+TGG | + | chr5.3:3609820-3609839 | MS.gene072755:CDS | 40.0% | |
GATGCAACAGTATCACAATG+GGG | + | chr5.3:3610651-3610670 | MS.gene072755:CDS | 40.0% | |
GATTGCAGGAATTAAACTCG+CGG | - | chr5.3:3610501-3610520 | None:intergenic | 40.0% | |
GCATATCTGCAAAATAGCCA+AGG | - | chr5.3:3607615-3607634 | None:intergenic | 40.0% | |
GCCAAAATACGAGCTAATAC+AGG | - | chr5.3:3608756-3608775 | None:intergenic | 40.0% | |
GTGATGCAACAGTATCACAA+TGG | + | chr5.3:3610649-3610668 | MS.gene072755:CDS | 40.0% | |
TAGCGGTAAATCAATCTCAG+AGG | + | chr5.3:3610372-3610391 | MS.gene072755:CDS | 40.0% | |
TCGATCAAGTTTATCACCGA+CGG | - | chr5.3:3609731-3609750 | None:intergenic | 40.0% | |
TCTAATACTGGAAGACTCTG+GGG | - | chr5.3:3608498-3608517 | None:intergenic | 40.0% | |
TCTTGATTATGCACTTCCCT+TGG | + | chr5.3:3607595-3607614 | MS.gene072755:CDS | 40.0% | |
TGATTCATAGGTCGTGAACA+TGG | - | chr5.3:3609484-3609503 | None:intergenic | 40.0% | |
TGCTCTTGTGGAGAAAATAG+AGG | + | chr5.3:3609148-3609167 | MS.gene072755:CDS | 40.0% | |
TGGGCCATCCATTTGAAAAT+TGG | - | chr5.3:3608969-3608988 | None:intergenic | 40.0% | |
TTACCCTTTGCACTAGGAAT+TGG | + | chr5.3:3608636-3608655 | MS.gene072755:CDS | 40.0% | |
TTAGATGTGGACTTCATTGG+TGG | - | chr5.3:3607551-3607570 | None:intergenic | 40.0% | |
TTATTCCGTCCAAATGCTGA+TGG | - | chr5.3:3608450-3608469 | None:intergenic | 40.0% | |
TTCGATCTTTACCGATGTTG+AGG | - | chr5.3:3609409-3609428 | None:intergenic | 40.0% | |
! | AAGGGAAGTGCATAATCAAG+AGG | - | chr5.3:3607596-3607615 | None:intergenic | 40.0% |
! | ACCTGAAAGAATTTTCCGAG+AGG | + | chr5.3:3609801-3609820 | MS.gene072755:CDS | 40.0% |
! | AGGGAAGTGCATAATCAAGA+GGG | - | chr5.3:3607595-3607614 | None:intergenic | 40.0% |
! | ATCTGTTTCTTGTGGGTCTA+AGG | + | chr5.3:3610518-3610537 | MS.gene072755:CDS | 40.0% |
! | ATTTTTGTTGATCGCGGACT+TGG | + | chr5.3:3610151-3610170 | MS.gene072755:CDS | 40.0% |
! | CCAAAAGATGGACCATTTTC+CGG | + | chr5.3:3609125-3609144 | MS.gene072755:CDS | 40.0% |
! | TCCTGCAATCTGTTTCTTGT+GGG | + | chr5.3:3610511-3610530 | MS.gene072755:CDS | 40.0% |
! | TTCCCTCTAAAAAAGCGCAA+AGG | + | chr5.3:3608259-3608278 | MS.gene072755:intron | 40.0% |
! | TTCCTGCAATCTGTTTCTTG+TGG | + | chr5.3:3610510-3610529 | MS.gene072755:CDS | 40.0% |
!! | TAGTATTGATGAGGACCTCT+CGG | - | chr5.3:3609819-3609838 | None:intergenic | 40.0% |
!! | TATTTTCTCCACAAGAGCAC+CGG | - | chr5.3:3609147-3609166 | None:intergenic | 40.0% |
!!! | GAAAAAACGGGTTGCCATTT+TGG | + | chr5.3:3609855-3609874 | MS.gene072755:CDS | 40.0% |
!!! | GCTTGTTTTGGGAAGATTGT+TGG | + | chr5.3:3609287-3609306 | MS.gene072755:CDS | 40.0% |
!!! | GGGTTGCCATTTTGGAATAA+AGG | + | chr5.3:3609863-3609882 | MS.gene072755:CDS | 40.0% |
AAAATGCAGACAGCCAGTTG+AGG | + | chr5.3:3609672-3609691 | MS.gene072755:CDS | 45.0% | |
AAATCTCTGCGGAAAACTGG+AGG | + | chr5.3:3608579-3608598 | MS.gene072755:CDS | 45.0% | |
AACTTGATCGAGGCTTCAAG+AGG | + | chr5.3:3609740-3609759 | MS.gene072755:CDS | 45.0% | |
AAGACCCAGAGTGAAACAAG+AGG | - | chr5.3:3608900-3608919 | None:intergenic | 45.0% | |
ACCAAAACTGAGGCTGTTGT+GGG | - | chr5.3:3610631-3610650 | None:intergenic | 45.0% | |
ACCCACAAGAAACAGATTGC+AGG | - | chr5.3:3610515-3610534 | None:intergenic | 45.0% | |
ACGGAATATTCCTTGCACCA+TGG | - | chr5.3:3609712-3609731 | None:intergenic | 45.0% | |
AGAGCTTGAATGAGGAAAGG+AGG | + | chr5.3:3608303-3608322 | MS.gene072755:intron | 45.0% | |
AGAGTGAAACAAGAGGAGAC+TGG | - | chr5.3:3608893-3608912 | None:intergenic | 45.0% | |
AGCTTGAATGAGGAAAGGAG+GGG | + | chr5.3:3608305-3608324 | MS.gene072755:intron | 45.0% | |
AGGAGATTGCTACCATTGGA+CGG | - | chr5.3:3609958-3609977 | None:intergenic | 45.0% | |
CAGACAAGCAAAGAGTCACT+AGG | + | chr5.3:3607934-3607953 | MS.gene072755:intron | 45.0% | |
CAGTTAATGATGTAGCAGCC+TGG | + | chr5.3:3608829-3608848 | MS.gene072755:CDS | 45.0% | |
CCAACATAGCTACCATTCAG+GGG | + | chr5.3:3609225-3609244 | MS.gene072755:CDS | 45.0% | |
CCATGTTATCGTGGCATTTG+AGG | + | chr5.3:3609904-3609923 | MS.gene072755:CDS | 45.0% | |
CCCTTGTGACTACAAGAACA+AGG | - | chr5.3:3607637-3607656 | None:intergenic | 45.0% | |
CCTAAATCTCTGCGGAAAAC+TGG | + | chr5.3:3608576-3608595 | MS.gene072755:CDS | 45.0% | |
CCTCAAATGCCACGATAACA+TGG | - | chr5.3:3609907-3609926 | None:intergenic | 45.0% | |
CGAACCAATTCCTAGTGCAA+AGG | - | chr5.3:3608643-3608662 | None:intergenic | 45.0% | |
CGACCTATGAATCACTGTGA+TGG | + | chr5.3:3609490-3609509 | MS.gene072755:intron | 45.0% | |
CTCACCTTCATGGCATTGTT+GGG | - | chr5.3:3608988-3609007 | None:intergenic | 45.0% | |
CTCCATAAGCAAGAGCTTCA+CGG | - | chr5.3:3610249-3610268 | None:intergenic | 45.0% | |
CTGTTGCATCACCAAAACTG+AGG | - | chr5.3:3610641-3610660 | None:intergenic | 45.0% | |
GACAGGGAGGAATACTACTT+GGG | + | chr5.3:3608424-3608443 | MS.gene072755:intron | 45.0% | |
GACCAACATAGCTACCATTC+AGG | + | chr5.3:3609223-3609242 | MS.gene072755:CDS | 45.0% | |
GAGAGCCATGAGAACCATAA+TGG | - | chr5.3:3609561-3609580 | None:intergenic | 45.0% | |
GAGCTTGAATGAGGAAAGGA+GGG | + | chr5.3:3608304-3608323 | MS.gene072755:intron | 45.0% | |
GCGGATAGTAGCAACTGTTT+CGG | - | chr5.3:3610482-3610501 | None:intergenic | 45.0% | |
GGGTTTGTCACAGATGCTAT+TGG | + | chr5.3:3609059-3609078 | MS.gene072755:CDS | 45.0% | |
GTCCTTGCAATTGCTATGGT+CGG | + | chr5.3:3608606-3608625 | MS.gene072755:CDS | 45.0% | |
GTCGGTGATAAACTTGATCG+AGG | + | chr5.3:3609730-3609749 | MS.gene072755:CDS | 45.0% | |
TCAAGTTTGTGTCCGTCCAA+TGG | + | chr5.3:3609943-3609962 | MS.gene072755:CDS | 45.0% | |
TCGAGTCCTTGCAATTGCTA+TGG | + | chr5.3:3608602-3608621 | MS.gene072755:CDS | 45.0% | |
TCTTGCTTATGGAGCTCGTA+TGG | + | chr5.3:3610255-3610274 | MS.gene072755:CDS | 45.0% | |
TGACAGGGAGGAATACTACT+TGG | + | chr5.3:3608423-3608442 | MS.gene072755:intron | 45.0% | |
TGACGAGACCTTTGCCATTA+TGG | + | chr5.3:3609544-3609563 | MS.gene072755:CDS | 45.0% | |
TGCAGCTCTCTTTCTTTCAG+CGG | - | chr5.3:3610014-3610033 | None:intergenic | 45.0% | |
TGGTGCAAGGAATATTCCGT+CGG | + | chr5.3:3609712-3609731 | MS.gene072755:CDS | 45.0% | |
TGTTTCACTCTGGGTCTTCT+TGG | + | chr5.3:3608902-3608921 | MS.gene072755:CDS | 45.0% | |
TTATACGCAGCCATCACAAG+AGG | - | chr5.3:3609605-3609624 | None:intergenic | 45.0% | |
TTCCGACCATAGCAATTGCA+AGG | - | chr5.3:3608611-3608630 | None:intergenic | 45.0% | |
TTGTGATGGCTGCGTATAAG+CGG | + | chr5.3:3609606-3609625 | MS.gene072755:CDS | 45.0% | |
! | AGACTGGCTATTGCCTGATA+AGG | - | chr5.3:3608877-3608896 | None:intergenic | 45.0% |
! | AGTCTCCTCTTGTTTCACTC+TGG | + | chr5.3:3608892-3608911 | MS.gene072755:CDS | 45.0% |
! | CCAGTTTTCCGCAGAGATTT+AGG | - | chr5.3:3608579-3608598 | None:intergenic | 45.0% |
! | CCGGAAAATGGTCCATCTTT+TGG | - | chr5.3:3609128-3609147 | None:intergenic | 45.0% |
! | GCCTTGTTCTTGTAGTCACA+AGG | + | chr5.3:3607633-3607652 | MS.gene072755:CDS | 45.0% |
! | GTCTCCTCTTGTTTCACTCT+GGG | + | chr5.3:3608893-3608912 | MS.gene072755:CDS | 45.0% |
! | TAATCTTATGCCAGGGTGCT+CGG | - | chr5.3:3610281-3610300 | None:intergenic | 45.0% |
! | TGCTACACTAGCTTCTGTTC+TGG | + | chr5.3:3609031-3609050 | MS.gene072755:CDS | 45.0% |
! | TGTGTGGCTGTGCTTTTCTT+TGG | + | chr5.3:3610211-3610230 | MS.gene072755:CDS | 45.0% |
!! | GTAGATAACGGAGTCATCAC+TGG | - | chr5.3:3610434-3610453 | None:intergenic | 45.0% |
!! | ATTGTAAAATTATATAAAAA+TGG | - | chr5.3:3607998-3608017 | None:intergenic | 5.0% |
ACAATGCCATGAAGGTGAGC+CGG | + | chr5.3:3608989-3609008 | MS.gene072755:CDS | 50.0% | |
AGCAGGCAAGAATCCTCAAC+TGG | - | chr5.3:3609688-3609707 | None:intergenic | 50.0% | |
AGGATTCTTGCCTGCTTCCA+TGG | + | chr5.3:3609692-3609711 | MS.gene072755:CDS | 50.0% | |
ATGGCCCAACAATGCCATGA+AGG | + | chr5.3:3608981-3609000 | MS.gene072755:CDS | 50.0% | |
ATTCAGGGGCTGCAATCTTG+GGG | + | chr5.3:3609239-3609258 | MS.gene072755:CDS | 50.0% | |
ATTCCTTGCACCATGGAAGC+AGG | - | chr5.3:3609705-3609724 | None:intergenic | 50.0% | |
CACAAGAGGAGTGGTCATGA+AGG | - | chr5.3:3609591-3609610 | None:intergenic | 50.0% | |
CACCAAAACTGAGGCTGTTG+TGG | - | chr5.3:3610632-3610651 | None:intergenic | 50.0% | |
CATGACCACTCCTCTTGTGA+TGG | + | chr5.3:3609592-3609611 | MS.gene072755:CDS | 50.0% | |
CATTCAGGGGCTGCAATCTT+GGG | + | chr5.3:3609238-3609257 | MS.gene072755:CDS | 50.0% | |
CCAAAACTGAGGCTGTTGTG+GGG | - | chr5.3:3610630-3610649 | None:intergenic | 50.0% | |
CCCCTGAATGGTAGCTATGT+TGG | - | chr5.3:3609228-3609247 | None:intergenic | 50.0% | |
CTACTTGGGCCATCAGCATT+TGG | + | chr5.3:3608438-3608457 | MS.gene072755:CDS | 50.0% | |
GACCGTGAAGCTCTTGCTTA+TGG | + | chr5.3:3610244-3610263 | MS.gene072755:CDS | 50.0% | |
GACGTTGGAGACTCATCTAG+CGG | + | chr5.3:3610355-3610374 | MS.gene072755:CDS | 50.0% | |
GATACCAACAAGCCACCAAC+AGG | - | chr5.3:3610598-3610617 | None:intergenic | 50.0% | |
GATGTGGACTTCATTGGTGG+CGG | - | chr5.3:3607548-3607567 | None:intergenic | 50.0% | |
GCACCCTGGCATAAGATTAG+TGG | + | chr5.3:3610282-3610301 | MS.gene072755:CDS | 50.0% | |
GCTCACCTTCATGGCATTGT+TGG | - | chr5.3:3608989-3609008 | None:intergenic | 50.0% | |
TCTTGTAGTCACAAGGGGAC+TGG | + | chr5.3:3607640-3607659 | MS.gene072755:CDS | 50.0% | |
TGTCGGACGAATGGCTATGT+CGG | + | chr5.3:3608800-3608819 | MS.gene072755:CDS | 50.0% | |
TTGGGCCATCAGCATTTGGA+CGG | + | chr5.3:3608442-3608461 | MS.gene072755:CDS | 50.0% | |
TTTGTTGATCGCGGACTTGG+TGG | + | chr5.3:3610154-3610173 | MS.gene072755:CDS | 50.0% | |
! | AATACTGGAAGACTCTGGGG+TGG | - | chr5.3:3608495-3608514 | None:intergenic | 50.0% |
! | ACCATTTTCCGGTGCTCTTG+TGG | + | chr5.3:3609136-3609155 | MS.gene072755:CDS | 50.0% |
! | ATGGCTGGCTGCTTATTGAC+AGG | + | chr5.3:3608407-3608426 | MS.gene072755:intron | 50.0% |
! | ATGTGGACTTCATTGGTGGC+GGG | - | chr5.3:3607547-3607566 | None:intergenic | 50.0% |
! | GCTGTGCTTTTCTTTGGTGG+TGG | + | chr5.3:3610217-3610236 | MS.gene072755:CDS | 50.0% |
! | GTGGCTGTGCTTTTCTTTGG+TGG | + | chr5.3:3610214-3610233 | MS.gene072755:CDS | 50.0% |
! | TAGCTTCTGTTCTGGCTGCT+GGG | + | chr5.3:3609039-3609058 | MS.gene072755:CDS | 50.0% |
! | TCTAAGGCCAACCGGTGAAT+TGG | + | chr5.3:3610534-3610553 | MS.gene072755:CDS | 50.0% |
! | TGGCTGGCTGCTTATTGACA+GGG | + | chr5.3:3608408-3608427 | MS.gene072755:intron | 50.0% |
!! | ATACTGGAAGACTCTGGGGT+GGG | - | chr5.3:3608494-3608513 | None:intergenic | 50.0% |
!! | GAGATTACCAGCGTTGACGT+TGG | + | chr5.3:3610340-3610359 | MS.gene072755:CDS | 50.0% |
!! | TCCACAAGAGCACCGGAAAA+TGG | - | chr5.3:3609140-3609159 | None:intergenic | 50.0% |
AGCCAGAGCAAGAAGGATCC+AGG | - | chr5.3:3608850-3608869 | None:intergenic | 55.0% | |
AGCCTGGATCCTTCTTGCTC+TGG | + | chr5.3:3608845-3608864 | MS.gene072755:CDS | 55.0% | |
AGGCAACAGCCAGAGCAAGA+AGG | - | chr5.3:3608857-3608876 | None:intergenic | 55.0% | |
AGGCTGTTGTGGGGCAATCT+TGG | - | chr5.3:3610621-3610640 | None:intergenic | 55.0% | |
CACCAACAGGTCCTAGTTCC+GGG | - | chr5.3:3610585-3610604 | None:intergenic | 55.0% | |
CACTCTGGGTCTTCTTGGCT+GGG | + | chr5.3:3608907-3608926 | MS.gene072755:CDS | 55.0% | |
CAGAGCACAGGCCAATTCAC+CGG | - | chr5.3:3610548-3610567 | None:intergenic | 55.0% | |
CATAGCCATTCGTCCGACAC+TGG | - | chr5.3:3608799-3608818 | None:intergenic | 55.0% | |
CCAAGATTGCAGCCCCTGAA+TGG | - | chr5.3:3609240-3609259 | None:intergenic | 55.0% | |
CCACCAACAGGTCCTAGTTC+CGG | - | chr5.3:3610586-3610605 | None:intergenic | 55.0% | |
CCATTCAGGGGCTGCAATCT+TGG | + | chr5.3:3609237-3609256 | MS.gene072755:CDS | 55.0% | |
CTCGCTTCTTTCCAGAGCAC+AGG | - | chr5.3:3610560-3610579 | None:intergenic | 55.0% | |
CTGGCTGCTTATTGACAGGG+AGG | + | chr5.3:3608411-3608430 | MS.gene072755:intron | 55.0% | |
GAGCATGCACCATGCTCAGT+TGG | + | chr5.3:3610127-3610146 | MS.gene072755:CDS | 55.0% | |
GCTCTGGCTGTTGCCTTATC+AGG | + | chr5.3:3608861-3608880 | MS.gene072755:CDS | 55.0% | |
GGCTGTTGTGGGGCAATCTT+GGG | - | chr5.3:3610620-3610639 | None:intergenic | 55.0% | |
TCACTCTGGGTCTTCTTGGC+TGG | + | chr5.3:3608906-3608925 | MS.gene072755:CDS | 55.0% | |
TCTGGAAAGAAGCGAGTGCC+CGG | + | chr5.3:3610564-3610583 | MS.gene072755:CDS | 55.0% | |
TGAGTCTCCAACGTCAACGC+TGG | - | chr5.3:3610350-3610369 | None:intergenic | 55.0% | |
TTGCCTGCTTCCATGGTGCA+AGG | + | chr5.3:3609699-3609718 | MS.gene072755:CDS | 55.0% | |
! | AACCACCAGTGTCGGACGAA+TGG | + | chr5.3:3608791-3608810 | MS.gene072755:CDS | 55.0% |
! | ACGAATGGCTATGTCGGCTG+CGG | + | chr5.3:3608806-3608825 | MS.gene072755:CDS | 55.0% |
! | CCCCACAACAGCCTCAGTTT+TGG | + | chr5.3:3610627-3610646 | MS.gene072755:CDS | 55.0% |
! | CTAGCTTCTGTTCTGGCTGC+TGG | + | chr5.3:3609038-3609057 | MS.gene072755:CDS | 55.0% |
! | CTTGTGGGTCTAAGGCCAAC+CGG | + | chr5.3:3610526-3610545 | MS.gene072755:CDS | 55.0% |
!! | AGGACCTGTTGGTGGCTTGT+TGG | + | chr5.3:3610591-3610610 | MS.gene072755:CDS | 55.0% |
AGAAGCGAGTGCCCGGAACT+AGG | + | chr5.3:3610571-3610590 | MS.gene072755:CDS | 60.0% | |
AGCCATTCGTCCGACACTGG+TGG | - | chr5.3:3608796-3608815 | None:intergenic | 60.0% | |
CCGGAACTAGGACCTGTTGG+TGG | + | chr5.3:3610583-3610602 | MS.gene072755:CDS | 60.0% | |
CGCAGCCATCACAAGAGGAG+TGG | - | chr5.3:3609600-3609619 | None:intergenic | 60.0% | |
GCACAGGCCAATTCACCGGT+TGG | - | chr5.3:3610544-3610563 | None:intergenic | 60.0% | |
TGCCCGGAACTAGGACCTGT+TGG | + | chr5.3:3610580-3610599 | MS.gene072755:CDS | 60.0% | |
TGGGTCTTCTTGGCTGGGTG+TGG | + | chr5.3:3608912-3608931 | MS.gene072755:CDS | 60.0% | |
! | CATCGACCGGCTCACCTTCA+TGG | - | chr5.3:3608998-3609017 | None:intergenic | 60.0% |
! | CGGTGAATTGGCCTGTGCTC+TGG | + | chr5.3:3610546-3610565 | MS.gene072755:CDS | 60.0% |
GCTCGTATGGCCGAGCACCC+TGG | + | chr5.3:3610268-3610287 | MS.gene072755:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 3607512 | 3610729 | 3607512 | ID=MS.gene072755 |
chr5.3 | mRNA | 3607512 | 3610729 | 3607512 | ID=MS.gene072755.t1;Parent=MS.gene072755 |
chr5.3 | exon | 3607512 | 3607712 | 3607512 | ID=MS.gene072755.t1.exon1;Parent=MS.gene072755.t1 |
chr5.3 | CDS | 3607512 | 3607712 | 3607512 | ID=cds.MS.gene072755.t1;Parent=MS.gene072755.t1 |
chr5.3 | exon | 3608429 | 3609430 | 3608429 | ID=MS.gene072755.t1.exon2;Parent=MS.gene072755.t1 |
chr5.3 | CDS | 3608429 | 3609430 | 3608429 | ID=cds.MS.gene072755.t1;Parent=MS.gene072755.t1 |
chr5.3 | exon | 3609536 | 3610729 | 3609536 | ID=MS.gene072755.t1.exon3;Parent=MS.gene072755.t1 |
chr5.3 | CDS | 3609536 | 3610729 | 3609536 | ID=cds.MS.gene072755.t1;Parent=MS.gene072755.t1 |
Gene Sequence |
Protein sequence |