Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073326.t1 | XP_003610042.1 | 96.5 | 822 | 27 | 1 | 1 | 822 | 1 | 820 | 0.00E+00 | 1487.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073326.t1 | Q9SZR3 | 34.9 | 1041 | 430 | 29 | 1 | 819 | 1 | 1015 | 1.5e-123 | 445.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073326.t1 | G7JU94 | 96.5 | 822 | 27 | 1 | 1 | 822 | 1 | 820 | 0.0e+00 | 1487.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene073326 | 0.846343 | 2.31E-59 | -1.69E-46 |
| MS.gene051018 | MS.gene073326 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene073326 | 0.810418 | 1.16E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene073326 | 0.806412 | 8.33E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene073326 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene073326 | 0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene053536 | MS.gene073326 | 0.842541 | 2.43E-58 | -1.69E-46 |
| MS.gene053538 | MS.gene073326 | 0.841338 | 5.05E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene073326 | 0.814042 | 1.88E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene073326 | 0.846727 | 1.81E-59 | -1.69E-46 |
| MS.gene055764 | MS.gene073326 | 0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene056169 | MS.gene073326 | 0.814345 | 1.62E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene073326 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene073326 | 0.841594 | 4.32E-58 | -1.69E-46 |
| MS.gene058668 | MS.gene073326 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene073326 | 0.852434 | 4.63E-61 | -1.69E-46 |
| MS.gene059424 | MS.gene073326 | 0.82718 | 1.80E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073326.t1 | MTR_4g127290 | 97.567 | 822 | 18 | 1 | 1 | 822 | 1 | 820 | 0.0 | 1637 |
| MS.gene073326.t1 | MTR_2g038200 | 52.038 | 638 | 217 | 18 | 247 | 822 | 399 | 1009 | 1.15e-180 | 546 |
| MS.gene073326.t1 | MTR_2g038200 | 76.136 | 176 | 34 | 4 | 1 | 172 | 1 | 172 | 5.88e-62 | 226 |
| MS.gene073326.t1 | MTR_1g057150 | 63.102 | 187 | 49 | 5 | 1 | 177 | 1 | 177 | 1.65e-61 | 223 |
| MS.gene073326.t1 | MTR_1g090640 | 63.636 | 176 | 49 | 5 | 1 | 170 | 1 | 167 | 7.11e-57 | 210 |
| MS.gene073326.t1 | MTR_4g129230 | 51.899 | 237 | 103 | 5 | 1 | 234 | 1 | 229 | 4.23e-53 | 200 |
| MS.gene073326.t1 | MTR_4g129230 | 21.747 | 584 | 311 | 21 | 291 | 781 | 454 | 984 | 2.08e-13 | 74.7 |
| MS.gene073326.t1 | MTR_3g464150 | 45.349 | 172 | 79 | 3 | 9 | 166 | 9 | 179 | 4.14e-25 | 112 |
| MS.gene073326.t1 | MTR_3g464150 | 27.832 | 309 | 159 | 13 | 449 | 709 | 682 | 974 | 4.66e-13 | 73.6 |
| MS.gene073326.t1 | MTR_5g071060 | 38.793 | 232 | 125 | 7 | 9 | 226 | 9 | 237 | 1.24e-24 | 111 |
| MS.gene073326.t1 | MTR_5g071060 | 26.117 | 291 | 139 | 9 | 449 | 681 | 683 | 955 | 8.79e-13 | 72.8 |
| MS.gene073326.t1 | MTR_5g071060 | 38.793 | 232 | 125 | 7 | 9 | 226 | 9 | 237 | 1.24e-24 | 111 |
| MS.gene073326.t1 | MTR_5g071060 | 26.117 | 291 | 139 | 9 | 449 | 681 | 650 | 922 | 8.25e-13 | 72.8 |
| MS.gene073326.t1 | MTR_3g070850 | 42.604 | 169 | 83 | 4 | 9 | 166 | 9 | 174 | 6.68e-22 | 102 |
| MS.gene073326.t1 | MTR_1183s0010 | 50.000 | 92 | 41 | 2 | 84 | 173 | 12 | 100 | 8.30e-16 | 79.3 |
| MS.gene073326.t1 | MTR_1384s0010 | 39.394 | 132 | 45 | 7 | 1 | 125 | 1 | 104 | 1.99e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073326.t1 | AT4G29920 | 37.869 | 610 | 320 | 21 | 247 | 819 | 431 | 1018 | 1.32e-95 | 322 |
| MS.gene073326.t1 | AT4G29920 | 58.506 | 241 | 73 | 7 | 1 | 218 | 1 | 237 | 6.38e-61 | 223 |
| MS.gene073326.t1 | AT4G29920 | 37.705 | 610 | 318 | 21 | 247 | 819 | 431 | 1015 | 8.25e-95 | 319 |
| MS.gene073326.t1 | AT4G29920 | 58.506 | 241 | 73 | 7 | 1 | 218 | 1 | 237 | 5.92e-61 | 224 |
| MS.gene073326.t1 | AT5G57130 | 60.924 | 238 | 65 | 5 | 1 | 215 | 1 | 233 | 8.90e-72 | 255 |
| MS.gene073326.t1 | AT5G57130 | 33.333 | 609 | 323 | 28 | 246 | 820 | 468 | 1027 | 8.77e-64 | 232 |
| MS.gene073326.t1 | AT3G52490 | 63.687 | 179 | 50 | 4 | 1 | 174 | 1 | 169 | 1.16e-58 | 215 |
| MS.gene073326.t1 | AT3G52490 | 25.128 | 390 | 235 | 9 | 243 | 587 | 365 | 742 | 4.15e-21 | 99.8 |
| MS.gene073326.t1 | AT5G57710 | 55.157 | 223 | 77 | 7 | 1 | 213 | 1 | 210 | 2.52e-52 | 197 |
| MS.gene073326.t1 | AT4G30350 | 55.172 | 203 | 71 | 4 | 1 | 191 | 1 | 195 | 1.60e-46 | 179 |
| MS.gene073326.t1 | AT4G30350 | 21.453 | 592 | 340 | 20 | 264 | 811 | 409 | 919 | 2.96e-19 | 93.6 |
| MS.gene073326.t1 | AT2G29970 | 44.311 | 167 | 83 | 3 | 9 | 166 | 9 | 174 | 1.10e-28 | 124 |
| MS.gene073326.t1 | AT1G07200 | 44.379 | 169 | 80 | 3 | 9 | 166 | 9 | 174 | 1.32e-28 | 124 |
| MS.gene073326.t1 | AT1G07200 | 22.874 | 341 | 201 | 12 | 289 | 589 | 453 | 771 | 8.62e-11 | 66.2 |
| MS.gene073326.t1 | AT2G40130 | 45.455 | 165 | 80 | 3 | 9 | 166 | 9 | 170 | 1.88e-28 | 123 |
| MS.gene073326.t1 | AT2G40130 | 23.925 | 372 | 217 | 14 | 447 | 786 | 537 | 874 | 3.88e-11 | 67.4 |
| MS.gene073326.t1 | AT2G40130 | 45.455 | 165 | 80 | 3 | 9 | 166 | 9 | 170 | 2.34e-28 | 122 |
| MS.gene073326.t1 | AT2G40130 | 23.925 | 372 | 217 | 14 | 447 | 786 | 540 | 877 | 4.38e-11 | 67.4 |
Find 135 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGGGATAGTGGGTTTA+TGG | 0.097831 | 8.1:+5789498 | MS.gene073326:CDS |
| CTCTTCAATTCTAGGGTTCT+TGG | 0.166740 | 8.1:-5788990 | None:intergenic |
| CCTAATAGCATTTCAGAAAA+TGG | 0.180008 | 8.1:-5788677 | None:intergenic |
| GTTTGGGTGATAATAGAAAT+TGG | 0.193442 | 8.1:+5789476 | MS.gene073326:CDS |
| AGAAGAAAACATTGCCTTTC+TGG | 0.197917 | 8.1:+5787832 | MS.gene073326:CDS |
| AGTTTAATTTCAATGATAAA+AGG | 0.216333 | 8.1:+5788279 | MS.gene073326:CDS |
| AATTCTAGGGTTCTTGGTTT+TGG | 0.217523 | 8.1:-5788984 | None:intergenic |
| TGCCCCTATTCCAGTGATTT+TGG | 0.219820 | 8.1:-5788154 | None:intergenic |
| CTGAGAGAAATTTCATGAAT+TGG | 0.260874 | 8.1:-5788760 | None:intergenic |
| CTCTTGGGGCTCAAGAAATT+AGG | 0.268217 | 8.1:-5788938 | None:intergenic |
| GTTTCAATGTAGCTCTTAAT+AGG | 0.268715 | 8.1:+5786510 | MS.gene073326:CDS |
| TTGCTGCTGCTGCTGTTCTA+TGG | 0.269718 | 8.1:-5786633 | None:intergenic |
| AGTAACAAAGAGGGGAATTT+AGG | 0.272164 | 8.1:+5788815 | MS.gene073326:CDS |
| GCTTGACCCTTCATTCTTCC+AGG | 0.278647 | 8.1:+5787026 | MS.gene073326:CDS |
| AGAAATTGGGATTGGGATAG+TGG | 0.281827 | 8.1:+5789490 | MS.gene073326:CDS |
| CTCTCAGATGGATATGAAAA+AGG | 0.296673 | 8.1:+5788776 | MS.gene073326:CDS |
| TAACCGAGTTGAAAAGAAAA+TGG | 0.298255 | 8.1:+5788093 | MS.gene073326:CDS |
| TTTAAATGTTATAATAGTTC+TGG | 0.304204 | 8.1:+5786812 | MS.gene073326:CDS |
| AGAAACACATTTGAATTCAA+TGG | 0.324155 | 8.1:-5789175 | None:intergenic |
| GATTCCATTGCAAGCATAGA+AGG | 0.340258 | 8.1:+5788323 | MS.gene073326:CDS |
| AGCTGATTTGGTCCTTCAAT+TGG | 0.342833 | 8.1:+5788625 | MS.gene073326:CDS |
| CTAATAGCATTTCAGAAAAT+GGG | 0.352190 | 8.1:-5788676 | None:intergenic |
| CTAACAAAATGTTTGAGAAA+TGG | 0.353619 | 8.1:+5789380 | MS.gene073326:CDS |
| ATTCTCTTGTGTTGGCTAGA+AGG | 0.358333 | 8.1:+5786339 | MS.gene073326:CDS |
| TTTGAAGGAACTTAGTCTTA+AGG | 0.360363 | 8.1:-5786411 | None:intergenic |
| TTTCAGACAGAACAATTTCA+TGG | 0.360555 | 8.1:+5786907 | MS.gene073326:CDS |
| AAAGCCCTTTAGCAGTAATA+AGG | 0.361117 | 8.1:+5787728 | MS.gene073326:CDS |
| TGGCACAGAAGAACAAAATA+AGG | 0.368675 | 8.1:+5787866 | MS.gene073326:CDS |
| GCACCAAAATCACTGGAATA+GGG | 0.370902 | 8.1:+5788151 | MS.gene073326:CDS |
| AGCACCAAAATCACTGGAAT+AGG | 0.372688 | 8.1:+5788150 | MS.gene073326:CDS |
| TTTGGGTGATAATAGAAATT+GGG | 0.375578 | 8.1:+5789477 | MS.gene073326:CDS |
| TAAGACTAAGTTCCTTCAAA+AGG | 0.375696 | 8.1:+5786414 | MS.gene073326:CDS |
| ATCATTGAAATTAAACTCAA+TGG | 0.376365 | 8.1:-5788273 | None:intergenic |
| TGAGAGAAATTTCATGAATT+GGG | 0.385237 | 8.1:-5788759 | None:intergenic |
| CCTTTCTGGCTTCAGTCTCA+TGG | 0.390835 | 8.1:+5787846 | MS.gene073326:CDS |
| TTGTTTCCAGCATATGAGAT+AGG | 0.393515 | 8.1:-5787707 | None:intergenic |
| TTGATGATCCTAGTGTTAGT+AGG | 0.397262 | 8.1:+5786711 | MS.gene073326:CDS |
| GTTCTTCTCTTCAATGCTTG+TGG | 0.404826 | 8.1:-5788870 | None:intergenic |
| TTTCATTCTCTTCAATTCTA+GGG | 0.410585 | 8.1:-5788997 | None:intergenic |
| CTGTGATTCTCACTAGTTGA+AGG | 0.411339 | 8.1:-5786863 | None:intergenic |
| TTCTGAACAAGGAAGCAAAA+AGG | 0.413282 | 8.1:+5789033 | MS.gene073326:CDS |
| CAGTTTAGAAACAGTTAACT+TGG | 0.417821 | 8.1:+5789423 | MS.gene073326:CDS |
| GTGATAATAGAAATTGGGAT+TGG | 0.418688 | 8.1:+5789482 | MS.gene073326:CDS |
| CAGCTTTCATGTTCAGATCA+AGG | 0.421676 | 8.1:-5789093 | None:intergenic |
| TAATTAACTTGGATACTCTT+AGG | 0.423030 | 8.1:-5789532 | None:intergenic |
| AGTAGGGTTATGAGAGAAGC+TGG | 0.424536 | 8.1:+5786728 | MS.gene073326:CDS |
| GTTTAATTTCAATGATAAAA+GGG | 0.427762 | 8.1:+5788280 | MS.gene073326:CDS |
| TGCACCTTATTACTGCTAAA+GGG | 0.429521 | 8.1:-5787732 | None:intergenic |
| GTGGATGTTGTGAAGTTTGA+TGG | 0.431778 | 8.1:-5786463 | None:intergenic |
| AGAATTGAAGAGAATGAAAA+GGG | 0.443195 | 8.1:+5789001 | MS.gene073326:CDS |
| CAATGCAGCAATGAGAGCAT+TGG | 0.451420 | 8.1:-5786579 | None:intergenic |
| TAGAATTGAAGAGAATGAAA+AGG | 0.451533 | 8.1:+5789000 | MS.gene073326:CDS |
| TTCATGAAATTTCTCTCAGA+TGG | 0.451801 | 8.1:+5788764 | MS.gene073326:CDS |
| TTTGAAGCATTCTCTTGTGT+TGG | 0.454108 | 8.1:+5786331 | MS.gene073326:CDS |
| AATATTACCTGGAAGAATGA+AGG | 0.464963 | 8.1:-5787033 | None:intergenic |
| ATGCACCTTATTACTGCTAA+AGG | 0.466662 | 8.1:-5787733 | None:intergenic |
| GGGTCATTTGAAGATGTTTG+TGG | 0.467210 | 8.1:+5789283 | MS.gene073326:CDS |
| GCAGCAGCAGCAACAGCAAA+CGG | 0.470948 | 8.1:+5786643 | MS.gene073326:CDS |
| TGATAATAGAAATTGGGATT+GGG | 0.478557 | 8.1:+5789483 | MS.gene073326:CDS |
| AAGACTAAGTTCCTTCAAAA+GGG | 0.480191 | 8.1:+5786415 | MS.gene073326:CDS |
| ATCAAAGGAGAAGGTGTTGT+TGG | 0.481111 | 8.1:-5786536 | None:intergenic |
| AAAATGAAATTTCATTTACA+TGG | 0.483113 | 8.1:+5788528 | MS.gene073326:CDS |
| TGAAACTTTAAGTAACAAAG+AGG | 0.484462 | 8.1:+5788805 | MS.gene073326:CDS |
| ACTGAGTTGACGAGTACATC+AGG | 0.485948 | 8.1:+5786995 | MS.gene073326:CDS |
| TTTACCTTCTATGCTTGCAA+TGG | 0.488616 | 8.1:-5788327 | None:intergenic |
| TGATGATCCTAGTGTTAGTA+GGG | 0.489344 | 8.1:+5786712 | MS.gene073326:CDS |
| GTAATATTCATCTTAACAAA+AGG | 0.492526 | 8.1:+5788842 | MS.gene073326:CDS |
| ATTCTATGAAGTAATTAACT+TGG | 0.497847 | 8.1:-5789543 | None:intergenic |
| AGATGCTCATCTTGGAATCA+AGG | 0.504959 | 8.1:-5787677 | None:intergenic |
| GTTCTGAGAGATGCTCATCT+TGG | 0.505466 | 8.1:-5787685 | None:intergenic |
| GAACATGAAAGCTGATGAAG+AGG | 0.511062 | 8.1:+5789102 | MS.gene073326:CDS |
| GAAATTGGGATTGGGATAGT+GGG | 0.511786 | 8.1:+5789491 | MS.gene073326:CDS |
| ACGGAATCGAGGTGTAAGAT+TGG | 0.515150 | 8.1:-5788231 | None:intergenic |
| GAAGGCTGAGAGTGAATCAA+AGG | 0.518124 | 8.1:-5786551 | None:intergenic |
| TGTTGTGAAGTTTGATGGTG+TGG | 0.518229 | 8.1:-5786458 | None:intergenic |
| ACAAACAGCACCAAAATCAC+TGG | 0.519494 | 8.1:+5788144 | MS.gene073326:CDS |
| TCAGAACCTATCTCATATGC+TGG | 0.523908 | 8.1:+5787701 | MS.gene073326:CDS |
| CCATGAGACTGAAGCCAGAA+AGG | 0.527419 | 8.1:-5787846 | None:intergenic |
| AGCTTTCATGTTCAGATCAA+GGG | 0.528546 | 8.1:-5789092 | None:intergenic |
| GAGAAAACATCAACAGCTTG+TGG | 0.530991 | 8.1:+5788706 | MS.gene073326:CDS |
| AACAGTTAACTTGGGAGGGA+AGG | 0.532413 | 8.1:+5789432 | MS.gene073326:CDS |
| ACACAAGTTCAGATAAAGAC+AGG | 0.536618 | 8.1:+5789227 | MS.gene073326:CDS |
| CAATGGTGATGCATGATTGT+TGG | 0.538884 | 8.1:-5788256 | None:intergenic |
| GAAACTTTAAGTAACAAAGA+GGG | 0.538982 | 8.1:+5788806 | MS.gene073326:CDS |
| CACCAAAATCACTGGAATAG+GGG | 0.539949 | 8.1:+5788152 | MS.gene073326:CDS |
| TAGAAACAGTTAACTTGGGA+GGG | 0.540519 | 8.1:+5789428 | MS.gene073326:CDS |
| ACGAGTACATCAGGTGGACT+TGG | 0.541210 | 8.1:+5787004 | MS.gene073326:CDS |
| TGATGATTCAAGTGAAAAGG+TGG | 0.542844 | 8.1:+5788379 | MS.gene073326:CDS |
| ATATATCAAGTGATGCGCTC+AGG | 0.544488 | 8.1:+5786263 | None:intergenic |
| TGTTGATTTGGTATCAAACA+AGG | 0.544854 | 8.1:-5788501 | None:intergenic |
| TGAAGCAGCCTCTGCTGTGA+GGG | 0.545563 | 8.1:-5786306 | None:intergenic |
| TGATGCTTGATGAATTATTG+AGG | 0.548945 | 8.1:-5788196 | None:intergenic |
| GCTCAATTTCTCAGACCTGC+AGG | 0.549147 | 8.1:+5787807 | MS.gene073326:CDS |
| AAATGTTATAATAGTTCTGG+TGG | 0.549816 | 8.1:+5786815 | MS.gene073326:CDS |
| CAATGATGATTCAAGTGAAA+AGG | 0.551243 | 8.1:+5788376 | MS.gene073326:CDS |
| AAACTGTTATCAATTTGTTG+TGG | 0.554067 | 8.1:+5788897 | MS.gene073326:CDS |
| CTTGCAATGGAATCAAAGAC+TGG | 0.557776 | 8.1:-5788314 | None:intergenic |
| ATATTACCTGGAAGAATGAA+GGG | 0.561317 | 8.1:-5787032 | None:intergenic |
| TGTTCTGTCTGAAACTGCTA+AGG | 0.561994 | 8.1:-5786898 | None:intergenic |
| GCACAAGCTCATCAAAGAAG+AGG | 0.562580 | 8.1:+5786608 | MS.gene073326:CDS |
| TCACTAGTTGAAGGTGAACA+TGG | 0.565455 | 8.1:-5786854 | None:intergenic |
| GAATCGAGGTGTAAGATTGG+AGG | 0.571539 | 8.1:-5788228 | None:intergenic |
| TTAGAAACAGTTAACTTGGG+AGG | 0.573524 | 8.1:+5789427 | MS.gene073326:CDS |
| AAACTTTAAGTAACAAAGAG+GGG | 0.574195 | 8.1:+5788807 | MS.gene073326:CDS |
| TGAGAGTGAATCAAAGGAGA+AGG | 0.577096 | 8.1:-5786545 | None:intergenic |
| CTCATAACCCTACTAACACT+AGG | 0.579503 | 8.1:-5786719 | None:intergenic |
| AGTTTAGAAACAGTTAACTT+GGG | 0.581458 | 8.1:+5789424 | MS.gene073326:CDS |
| GTTAACTTGGGAGGGAAGGA+AGG | 0.581750 | 8.1:+5789436 | MS.gene073326:CDS |
| ATATTCATCTTAACAAAAGG+TGG | 0.591782 | 8.1:+5788845 | MS.gene073326:CDS |
| GTAAAGATTAGTCTTGCACT+TGG | 0.591838 | 8.1:+5788353 | MS.gene073326:CDS |
| AAAGTGATGGCTACATGTAG+AGG | 0.593224 | 8.1:-5786383 | None:intergenic |
| TCAAGAGCTCTAGATTGAAG+TGG | 0.600534 | 8.1:-5786482 | None:intergenic |
| TCTTAAGGTAAGTAAAGTGA+TGG | 0.602666 | 8.1:-5786396 | None:intergenic |
| CTTGTGTTGGCTAGAAGGAG+AGG | 0.606431 | 8.1:+5786344 | MS.gene073326:CDS |
| CTGAAGCAGCCTCTGCTGTG+AGG | 0.607118 | 8.1:-5786307 | None:intergenic |
| ATGAGAGCATTGGAAAGTGA+AGG | 0.611410 | 8.1:-5786569 | None:intergenic |
| GGAATAGTTTCAGATTGCCA+TGG | 0.614508 | 8.1:-5788464 | None:intergenic |
| TAGCAGTAATAAGGTGCATG+AGG | 0.621940 | 8.1:+5787737 | MS.gene073326:CDS |
| GTGATTGAAGACATGTGTGT+GGG | 0.624972 | 8.1:+5789343 | MS.gene073326:CDS |
| TAATAGCATTTCAGAAAATG+GGG | 0.629233 | 8.1:-5788675 | None:intergenic |
| GATGATTCAAGTGAAAAGGT+GGG | 0.632079 | 8.1:+5788380 | MS.gene073326:CDS |
| TATCAAGTGATGCGCTCAGG+AGG | 0.632949 | 8.1:+5786266 | None:intergenic |
| TGTTATAATAGTTCTGGTGG+TGG | 0.635592 | 8.1:+5786818 | MS.gene073326:CDS |
| AAAGCTGATGAAGAGGAAGA+TGG | 0.637095 | 8.1:+5789109 | MS.gene073326:CDS |
| GCAGCAGACCCTCACAGCAG+AGG | 0.647393 | 8.1:+5786298 | MS.gene073326:CDS |
| TAGAAGGAGAGGTCATCCAC+AGG | 0.649362 | 8.1:+5786355 | MS.gene073326:CDS |
| GGGTTGTTGATTTCTGAACA+AGG | 0.656741 | 8.1:+5789022 | MS.gene073326:CDS |
| GATTGTTGGTGACGGAATCG+AGG | 0.658811 | 8.1:-5788242 | None:intergenic |
| TGATGCATGATTGTTGGTGA+CGG | 0.674760 | 8.1:-5788250 | None:intergenic |
| TGATTGAAGACATGTGTGTG+GGG | 0.676956 | 8.1:+5789344 | MS.gene073326:CDS |
| ACATGTAGAGGAGTGACCTG+TGG | 0.684775 | 8.1:-5786371 | None:intergenic |
| GGTGATTGAAGACATGTGTG+TGG | 0.690099 | 8.1:+5789342 | MS.gene073326:CDS |
| TATTGCAAGAGAATGTGCCA+TGG | 0.693666 | 8.1:+5788447 | MS.gene073326:CDS |
| GAGTTGACGAGTACATCAGG+TGG | 0.710146 | 8.1:+5786998 | MS.gene073326:CDS |
| GAATTGAAGAGAATGAAAAG+GGG | 0.732384 | 8.1:+5789002 | MS.gene073326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAATTTCATTTACA+TGG | + | chr8.1:5788528-5788547 | MS.gene073326:CDS | 15.0% |
| !! | TTTAAATGTTATAATAGTTC+TGG | + | chr8.1:5786812-5786831 | MS.gene073326:CDS | 15.0% |
| !!! | AGTTTAATTTCAATGATAAA+AGG | + | chr8.1:5788279-5788298 | MS.gene073326:CDS | 15.0% |
| !!! | GTTTAATTTCAATGATAAAA+GGG | + | chr8.1:5788280-5788299 | MS.gene073326:CDS | 15.0% |
| !!! | TTCTTAATTTGTTTGATTTA+AGG | + | chr8.1:5787177-5787196 | MS.gene073326:intron | 15.0% |
| !!! | TTTTTCTGTTTAAGATTAAA+GGG | + | chr8.1:5789263-5789282 | MS.gene073326:CDS | 15.0% |
| !!! | TTTTTTCTGTTTAAGATTAA+AGG | + | chr8.1:5789262-5789281 | MS.gene073326:CDS | 15.0% |
| !! | AAGCAAAATAAAATATTACC+TGG | - | chr8.1:5787047-5787066 | None:intergenic | 20.0% |
| !! | ATCATTGAAATTAAACTCAA+TGG | - | chr8.1:5788276-5788295 | None:intergenic | 20.0% |
| !! | ATTCTATGAAGTAATTAACT+TGG | - | chr8.1:5789546-5789565 | None:intergenic | 20.0% |
| !! | CATTTAAAAACAGAATTAGA+AGG | - | chr8.1:5786800-5786819 | None:intergenic | 20.0% |
| !! | CCATAATTAAGCAAATAAAT+AGG | - | chr8.1:5787624-5787643 | None:intergenic | 20.0% |
| !! | CCTATTTATTTGCTTAATTA+TGG | + | chr8.1:5787621-5787640 | MS.gene073326:intron | 20.0% |
| !! | GTAATATTCATCTTAACAAA+AGG | + | chr8.1:5788842-5788861 | MS.gene073326:CDS | 20.0% |
| !!! | ATACATTTTAGACTTTGTTT+GGG | + | chr8.1:5789460-5789479 | MS.gene073326:CDS | 20.0% |
| !!! | ATGAATAATTCAACATTTTC+AGG | + | chr8.1:5788064-5788083 | MS.gene073326:intron | 20.0% |
| !!! | TATACATTTTAGACTTTGTT+TGG | + | chr8.1:5789459-5789478 | MS.gene073326:CDS | 20.0% |
| !!! | TGTTTGATTTAAGGTATAAA+AGG | + | chr8.1:5787186-5787205 | MS.gene073326:intron | 20.0% |
| !!! | TTATGTTTACCTTTCTTTTT+TGG | - | chr8.1:5787237-5787256 | None:intergenic | 20.0% |
| !!! | TTCATTTTGTTTTGTTGATT+TGG | - | chr8.1:5788516-5788535 | None:intergenic | 20.0% |
| !!! | TTTACATGGTTATTTTTACA+AGG | + | chr8.1:5788542-5788561 | MS.gene073326:CDS | 20.0% |
| ! | AAACTTTAAGTAACAAAGAG+GGG | + | chr8.1:5788807-5788826 | MS.gene073326:CDS | 25.0% |
| ! | AAAGACTACACTTTATCTAA+AGG | + | chr8.1:5787506-5787525 | MS.gene073326:intron | 25.0% |
| ! | ACACATGTTATGTTACTAAA+AGG | - | chr8.1:5787158-5787177 | None:intergenic | 25.0% |
| ! | AGAAACACATTTGAATTCAA+TGG | - | chr8.1:5789178-5789197 | None:intergenic | 25.0% |
| ! | AGAATTGAAGAGAATGAAAA+GGG | + | chr8.1:5789001-5789020 | MS.gene073326:CDS | 25.0% |
| ! | AGTTTAGAAACAGTTAACTT+GGG | + | chr8.1:5789424-5789443 | MS.gene073326:CDS | 25.0% |
| ! | ATATTCATCTTAACAAAAGG+TGG | + | chr8.1:5788845-5788864 | MS.gene073326:CDS | 25.0% |
| ! | CTAACAAAATGTTTGAGAAA+TGG | + | chr8.1:5789380-5789399 | MS.gene073326:CDS | 25.0% |
| ! | CTAATAGCATTTCAGAAAAT+GGG | - | chr8.1:5788679-5788698 | None:intergenic | 25.0% |
| ! | GAAACTTTAAGTAACAAAGA+GGG | + | chr8.1:5788806-5788825 | MS.gene073326:CDS | 25.0% |
| ! | TAAATGCAACCAAAAAAGAA+AGG | + | chr8.1:5787225-5787244 | MS.gene073326:intron | 25.0% |
| ! | TAATAGCATTTCAGAAAATG+GGG | - | chr8.1:5788678-5788697 | None:intergenic | 25.0% |
| ! | TAGAATTGAAGAGAATGAAA+AGG | + | chr8.1:5789000-5789019 | MS.gene073326:CDS | 25.0% |
| ! | TATAACACTTAGTACATGTT+TGG | + | chr8.1:5787077-5787096 | MS.gene073326:intron | 25.0% |
| ! | TCAATTGGATATGCTAAAAA+AGG | + | chr8.1:5788640-5788659 | MS.gene073326:CDS | 25.0% |
| ! | TGAAACTTTAAGTAACAAAG+AGG | + | chr8.1:5788805-5788824 | MS.gene073326:CDS | 25.0% |
| ! | TGAGAGAAATTTCATGAATT+GGG | - | chr8.1:5788762-5788781 | None:intergenic | 25.0% |
| ! | TGATAATAGAAATTGGGATT+GGG | + | chr8.1:5789483-5789502 | MS.gene073326:CDS | 25.0% |
| ! | TTTCATTCTCTTCAATTCTA+GGG | - | chr8.1:5789000-5789019 | None:intergenic | 25.0% |
| ! | TTTGGGTGATAATAGAAATT+GGG | + | chr8.1:5789477-5789496 | MS.gene073326:CDS | 25.0% |
| !! | ATTCCATTTTCTTTTCAACT+CGG | - | chr8.1:5788099-5788118 | None:intergenic | 25.0% |
| !! | TAATTAACTTGGATACTCTT+AGG | - | chr8.1:5789535-5789554 | None:intergenic | 25.0% |
| !! | TTTTCATTCTCTTCAATTCT+AGG | - | chr8.1:5789001-5789020 | None:intergenic | 25.0% |
| !!! | AAACTGTTATCAATTTGTTG+TGG | + | chr8.1:5788897-5788916 | MS.gene073326:CDS | 25.0% |
| !!! | AAATGTTATAATAGTTCTGG+TGG | + | chr8.1:5786815-5786834 | MS.gene073326:CDS | 25.0% |
| !!! | GAATTTTAGTGTAGATGAAA+AGG | + | chr8.1:5789321-5789340 | MS.gene073326:CDS | 25.0% |
| !!! | TCAGTCAAATTATTTTGAGT+TGG | + | chr8.1:5787475-5787494 | MS.gene073326:intron | 25.0% |
| !!! | TTGAGCTTCTTTTTCATAAT+TGG | - | chr8.1:5787793-5787812 | None:intergenic | 25.0% |
| !!! | TTTTTAGCATATCCAATTGA+AGG | - | chr8.1:5788640-5788659 | None:intergenic | 25.0% |
| AAGACTAAGTTCCTTCAAAA+GGG | + | chr8.1:5786415-5786434 | MS.gene073326:CDS | 30.0% | |
| AATATTACCTGGAAGAATGA+AGG | - | chr8.1:5787036-5787055 | None:intergenic | 30.0% | |
| ATAATGCAATCATCGTGTAT+TGG | - | chr8.1:5787948-5787967 | None:intergenic | 30.0% | |
| ATATTACCTGGAAGAATGAA+GGG | - | chr8.1:5787035-5787054 | None:intergenic | 30.0% | |
| CAATGATGATTCAAGTGAAA+AGG | + | chr8.1:5788376-5788395 | MS.gene073326:CDS | 30.0% | |
| CACATCTATGATAGTACTAT+TGG | + | chr8.1:5788038-5788057 | MS.gene073326:intron | 30.0% | |
| CAGTTTAGAAACAGTTAACT+TGG | + | chr8.1:5789423-5789442 | MS.gene073326:CDS | 30.0% | |
| CCTAATAGCATTTCAGAAAA+TGG | - | chr8.1:5788680-5788699 | None:intergenic | 30.0% | |
| CTGAGAGAAATTTCATGAAT+TGG | - | chr8.1:5788763-5788782 | None:intergenic | 30.0% | |
| GAATTGAAGAGAATGAAAAG+GGG | + | chr8.1:5789002-5789021 | MS.gene073326:CDS | 30.0% | |
| GTGATAATAGAAATTGGGAT+TGG | + | chr8.1:5789482-5789501 | MS.gene073326:CDS | 30.0% | |
| GTTTCAATGTAGCTCTTAAT+AGG | + | chr8.1:5786510-5786529 | MS.gene073326:CDS | 30.0% | |
| GTTTGGGTGATAATAGAAAT+TGG | + | chr8.1:5789476-5789495 | MS.gene073326:CDS | 30.0% | |
| TAAGACTAAGTTCCTTCAAA+AGG | + | chr8.1:5786414-5786433 | MS.gene073326:CDS | 30.0% | |
| TCTTAAGGTAAGTAAAGTGA+TGG | - | chr8.1:5786399-5786418 | None:intergenic | 30.0% | |
| TGATGCTTGATGAATTATTG+AGG | - | chr8.1:5788199-5788218 | None:intergenic | 30.0% | |
| TGTTTGTGGTAAGAAAAATG+TGG | + | chr8.1:5789297-5789316 | MS.gene073326:CDS | 30.0% | |
| TTCATGAAATTTCTCTCAGA+TGG | + | chr8.1:5788764-5788783 | MS.gene073326:CDS | 30.0% | |
| TTTCAGACAGAACAATTTCA+TGG | + | chr8.1:5786907-5786926 | MS.gene073326:CDS | 30.0% | |
| ! | AACAAGGCTTTTGATATTGA+AGG | - | chr8.1:5788488-5788507 | None:intergenic | 30.0% |
| ! | ATCAAATTCAGCTTTTCTCT+TGG | - | chr8.1:5788957-5788976 | None:intergenic | 30.0% |
| ! | TAACCGAGTTGAAAAGAAAA+TGG | + | chr8.1:5788093-5788112 | MS.gene073326:CDS | 30.0% |
| ! | TCAAATTCAGCTTTTCTCTT+GGG | - | chr8.1:5788956-5788975 | None:intergenic | 30.0% |
| !! | ACACATGTTAAAAGCATTGT+TGG | + | chr8.1:5787364-5787383 | MS.gene073326:intron | 30.0% |
| !! | ATGTTAAAAGCATTGTTGGT+TGG | + | chr8.1:5787368-5787387 | MS.gene073326:intron | 30.0% |
| !! | TGTTGATTTGGTATCAAACA+AGG | - | chr8.1:5788504-5788523 | None:intergenic | 30.0% |
| !! | TTTGAAGGAACTTAGTCTTA+AGG | - | chr8.1:5786414-5786433 | None:intergenic | 30.0% |
| !!! | CCATTTTCTGAAATGCTATT+AGG | + | chr8.1:5788677-5788696 | MS.gene073326:CDS | 30.0% |
| AAAGCCCTTTAGCAGTAATA+AGG | + | chr8.1:5787728-5787747 | MS.gene073326:CDS | 35.0% | |
| ACACAAGTTCAGATAAAGAC+AGG | + | chr8.1:5789227-5789246 | MS.gene073326:CDS | 35.0% | |
| AGAAGAAAACATTGCCTTTC+TGG | + | chr8.1:5787832-5787851 | MS.gene073326:CDS | 35.0% | |
| AGCTTTCATGTTCAGATCAA+GGG | - | chr8.1:5789095-5789114 | None:intergenic | 35.0% | |
| AGTAACAAAGAGGGGAATTT+AGG | + | chr8.1:5788815-5788834 | MS.gene073326:CDS | 35.0% | |
| ATGCACCTTATTACTGCTAA+AGG | - | chr8.1:5787736-5787755 | None:intergenic | 35.0% | |
| CTAAAAGGTTAGTGCATGTT+TGG | - | chr8.1:5787143-5787162 | None:intergenic | 35.0% | |
| CTCTCAGATGGATATGAAAA+AGG | + | chr8.1:5788776-5788795 | MS.gene073326:CDS | 35.0% | |
| GATGATTCAAGTGAAAAGGT+GGG | + | chr8.1:5788380-5788399 | MS.gene073326:CDS | 35.0% | |
| TGATGATCCTAGTGTTAGTA+GGG | + | chr8.1:5786712-5786731 | MS.gene073326:CDS | 35.0% | |
| TGATGATTCAAGTGAAAAGG+TGG | + | chr8.1:5788379-5788398 | MS.gene073326:CDS | 35.0% | |
| TGCACCTTATTACTGCTAAA+GGG | - | chr8.1:5787735-5787754 | None:intergenic | 35.0% | |
| TGGCACAGAAGAACAAAATA+AGG | + | chr8.1:5787866-5787885 | MS.gene073326:CDS | 35.0% | |
| TTCTGAACAAGGAAGCAAAA+AGG | + | chr8.1:5789033-5789052 | MS.gene073326:CDS | 35.0% | |
| TTGACTGATTAACGTGTAAG+AGG | - | chr8.1:5787463-5787482 | None:intergenic | 35.0% | |
| TTGTTTCCAGCATATGAGAT+AGG | - | chr8.1:5787710-5787729 | None:intergenic | 35.0% | |
| TTTACCTTCTATGCTTGCAA+TGG | - | chr8.1:5788330-5788349 | None:intergenic | 35.0% | |
| ! | AATGTGTTGAGGAGTATGTA+CGG | + | chr8.1:5787323-5787342 | MS.gene073326:intron | 35.0% |
| ! | CAAATTCAGCTTTTCTCTTG+GGG | - | chr8.1:5788955-5788974 | None:intergenic | 35.0% |
| ! | GCTATTGCAGAATCAGTTTT+TGG | + | chr8.1:5788599-5788618 | MS.gene073326:CDS | 35.0% |
| ! | TAGAAACAGTTAACTTGGGA+GGG | + | chr8.1:5789428-5789447 | MS.gene073326:CDS | 35.0% |
| ! | TTAGAAACAGTTAACTTGGG+AGG | + | chr8.1:5789427-5789446 | MS.gene073326:CDS | 35.0% |
| ! | TTGATGATCCTAGTGTTAGT+AGG | + | chr8.1:5786711-5786730 | MS.gene073326:CDS | 35.0% |
| ! | TTTGAAGCATTCTCTTGTGT+TGG | + | chr8.1:5786331-5786350 | MS.gene073326:CDS | 35.0% |
| !! | AAAGTGTTGTCTAGTTCTGA+TGG | + | chr8.1:5787270-5787289 | MS.gene073326:intron | 35.0% |
| !! | ATTTGTTGTGCAATGTGTTG+AGG | + | chr8.1:5787312-5787331 | MS.gene073326:intron | 35.0% |
| !! | GTAAAGATTAGTCTTGCACT+TGG | + | chr8.1:5788353-5788372 | MS.gene073326:CDS | 35.0% |
| !! | TGTTATAATAGTTCTGGTGG+TGG | + | chr8.1:5786818-5786837 | MS.gene073326:CDS | 35.0% |
| !!! | AATTCTAGGGTTCTTGGTTT+TGG | - | chr8.1:5788987-5789006 | None:intergenic | 35.0% |
| !!! | AGTTTTTGGTTCAGCTGATT+TGG | + | chr8.1:5788613-5788632 | MS.gene073326:CDS | 35.0% |
| !!! | GATTTTGGTGCTGTTTGTTT+TGG | - | chr8.1:5788142-5788161 | None:intergenic | 35.0% |
| AAAGCTGATGAAGAGGAAGA+TGG | + | chr8.1:5789109-5789128 | MS.gene073326:CDS | 40.0% | |
| AAAGTGATGGCTACATGTAG+AGG | - | chr8.1:5786386-5786405 | None:intergenic | 40.0% | |
| ACAAACAGCACCAAAATCAC+TGG | + | chr8.1:5788144-5788163 | MS.gene073326:CDS | 40.0% | |
| AGAAATTGGGATTGGGATAG+TGG | + | chr8.1:5789490-5789509 | MS.gene073326:CDS | 40.0% | |
| AGATGCTCATCTTGGAATCA+AGG | - | chr8.1:5787680-5787699 | None:intergenic | 40.0% | |
| AGCACCAAAATCACTGGAAT+AGG | + | chr8.1:5788150-5788169 | MS.gene073326:CDS | 40.0% | |
| CACCAAAATCACTGGAATAG+GGG | + | chr8.1:5788152-5788171 | MS.gene073326:CDS | 40.0% | |
| CAGCTTTCATGTTCAGATCA+AGG | - | chr8.1:5789096-5789115 | None:intergenic | 40.0% | |
| CTCATAACCCTACTAACACT+AGG | - | chr8.1:5786722-5786741 | None:intergenic | 40.0% | |
| CTGTGATTCTCACTAGTTGA+AGG | - | chr8.1:5786866-5786885 | None:intergenic | 40.0% | |
| CTTGCAATGGAATCAAAGAC+TGG | - | chr8.1:5788317-5788336 | None:intergenic | 40.0% | |
| GAAATTGGGATTGGGATAGT+GGG | + | chr8.1:5789491-5789510 | MS.gene073326:CDS | 40.0% | |
| GAACATGAAAGCTGATGAAG+AGG | + | chr8.1:5789102-5789121 | MS.gene073326:CDS | 40.0% | |
| GAGAAAACATCAACAGCTTG+TGG | + | chr8.1:5788706-5788725 | MS.gene073326:CDS | 40.0% | |
| GATTCCATTGCAAGCATAGA+AGG | + | chr8.1:5788323-5788342 | MS.gene073326:CDS | 40.0% | |
| GCACCAAAATCACTGGAATA+GGG | + | chr8.1:5788151-5788170 | MS.gene073326:CDS | 40.0% | |
| GGAATAGTTTCAGATTGCCA+TGG | - | chr8.1:5788467-5788486 | None:intergenic | 40.0% | |
| GGGTCATTTGAAGATGTTTG+TGG | + | chr8.1:5789283-5789302 | MS.gene073326:CDS | 40.0% | |
| GTGATTGAAGACATGTGTGT+GGG | + | chr8.1:5789343-5789362 | MS.gene073326:CDS | 40.0% | |
| GTGGATGTTGTGAAGTTTGA+TGG | - | chr8.1:5786466-5786485 | None:intergenic | 40.0% | |
| GTTCTTCTCTTCAATGCTTG+TGG | - | chr8.1:5788873-5788892 | None:intergenic | 40.0% | |
| TAGCAGTAATAAGGTGCATG+AGG | + | chr8.1:5787737-5787756 | MS.gene073326:CDS | 40.0% | |
| TATGTACGGTTACTGAGCTA+TGG | + | chr8.1:5787337-5787356 | MS.gene073326:intron | 40.0% | |
| TATTGCAAGAGAATGTGCCA+TGG | + | chr8.1:5788447-5788466 | MS.gene073326:CDS | 40.0% | |
| TCACTAGTTGAAGGTGAACA+TGG | - | chr8.1:5786857-5786876 | None:intergenic | 40.0% | |
| TCAGAACCTATCTCATATGC+TGG | + | chr8.1:5787701-5787720 | MS.gene073326:CDS | 40.0% | |
| TGAGAGTGAATCAAAGGAGA+AGG | - | chr8.1:5786548-5786567 | None:intergenic | 40.0% | |
| TGATTGAAGACATGTGTGTG+GGG | + | chr8.1:5789344-5789363 | MS.gene073326:CDS | 40.0% | |
| TGTTTGGATTCACAGTGAGT+TGG | + | chr8.1:5787093-5787112 | MS.gene073326:intron | 40.0% | |
| ! | AATGTTTTCTTCTGTCCTGC+AGG | - | chr8.1:5787825-5787844 | None:intergenic | 40.0% |
| ! | CAATGGTGATGCATGATTGT+TGG | - | chr8.1:5788259-5788278 | None:intergenic | 40.0% |
| ! | CTCGTCAACTCAGTTCTTTT+TGG | - | chr8.1:5786989-5787008 | None:intergenic | 40.0% |
| ! | CTTAAGACAAGCCCTTTTGA+AGG | - | chr8.1:5786429-5786448 | None:intergenic | 40.0% |
| ! | GTCAACTCAGTTCTTTTTGG+TGG | - | chr8.1:5786986-5787005 | None:intergenic | 40.0% |
| ! | TGATGCATGATTGTTGGTGA+CGG | - | chr8.1:5788253-5788272 | None:intergenic | 40.0% |
| ! | TGTTCTGTCTGAAACTGCTA+AGG | - | chr8.1:5786901-5786920 | None:intergenic | 40.0% |
| !! | AGCATTGTTGGTTGGTAGTA+AGG | + | chr8.1:5787376-5787395 | MS.gene073326:intron | 40.0% |
| !! | AGCTGATTTGGTCCTTCAAT+TGG | + | chr8.1:5788625-5788644 | MS.gene073326:CDS | 40.0% |
| !! | ATCAAAGGAGAAGGTGTTGT+TGG | - | chr8.1:5786539-5786558 | None:intergenic | 40.0% |
| !! | ATGAGAGCATTGGAAAGTGA+AGG | - | chr8.1:5786572-5786591 | None:intergenic | 40.0% |
| !! | ATTCTCTTGTGTTGGCTAGA+AGG | + | chr8.1:5786339-5786358 | MS.gene073326:CDS | 40.0% |
| !! | CTCTTCAATTCTAGGGTTCT+TGG | - | chr8.1:5788993-5789012 | None:intergenic | 40.0% |
| !! | GGGTTGTTGATTTCTGAACA+AGG | + | chr8.1:5789022-5789041 | MS.gene073326:CDS | 40.0% |
| !! | TCAAGAGCTCTAGATTGAAG+TGG | - | chr8.1:5786485-5786504 | None:intergenic | 40.0% |
| !! | TGTTGTGAAGTTTGATGGTG+TGG | - | chr8.1:5786461-5786480 | None:intergenic | 40.0% |
| !!! | GTTTGTTTTGGTGTAGACAG+TGG | - | chr8.1:5788130-5788149 | None:intergenic | 40.0% |
| ACGGAATCGAGGTGTAAGAT+TGG | - | chr8.1:5788234-5788253 | None:intergenic | 45.0% | |
| AGTAGGGTTATGAGAGAAGC+TGG | + | chr8.1:5786728-5786747 | MS.gene073326:CDS | 45.0% | |
| CTCTTGGGGCTCAAGAAATT+AGG | - | chr8.1:5788941-5788960 | None:intergenic | 45.0% | |
| GAAGGCTGAGAGTGAATCAA+AGG | - | chr8.1:5786554-5786573 | None:intergenic | 45.0% | |
| GAATCGAGGTGTAAGATTGG+AGG | - | chr8.1:5788231-5788250 | None:intergenic | 45.0% | |
| GCACAAGCTCATCAAAGAAG+AGG | + | chr8.1:5786608-5786627 | MS.gene073326:CDS | 45.0% | |
| GGTGATTGAAGACATGTGTG+TGG | + | chr8.1:5789342-5789361 | MS.gene073326:CDS | 45.0% | |
| ! | AACAGTTAACTTGGGAGGGA+AGG | + | chr8.1:5789432-5789451 | MS.gene073326:CDS | 45.0% |
| ! | ACTGAGTTGACGAGTACATC+AGG | + | chr8.1:5786995-5787014 | MS.gene073326:CDS | 45.0% |
| ! | CAATGCAGCAATGAGAGCAT+TGG | - | chr8.1:5786582-5786601 | None:intergenic | 45.0% |
| ! | TGCCCCTATTCCAGTGATTT+TGG | - | chr8.1:5788157-5788176 | None:intergenic | 45.0% |
| !! | GGATTGGGATAGTGGGTTTA+TGG | + | chr8.1:5789498-5789517 | MS.gene073326:CDS | 45.0% |
| !! | GTTCTGAGAGATGCTCATCT+TGG | - | chr8.1:5787688-5787707 | None:intergenic | 45.0% |
| ACATGTAGAGGAGTGACCTG+TGG | - | chr8.1:5786374-5786393 | None:intergenic | 50.0% | |
| CCATGAGACTGAAGCCAGAA+AGG | - | chr8.1:5787849-5787868 | None:intergenic | 50.0% | |
| GAGTTGACGAGTACATCAGG+TGG | + | chr8.1:5786998-5787017 | MS.gene073326:CDS | 50.0% | |
| GCTCAATTTCTCAGACCTGC+AGG | + | chr8.1:5787807-5787826 | MS.gene073326:CDS | 50.0% | |
| GCTTGACCCTTCATTCTTCC+AGG | + | chr8.1:5787026-5787045 | MS.gene073326:CDS | 50.0% | |
| TAGAAGGAGAGGTCATCCAC+AGG | + | chr8.1:5786355-5786374 | MS.gene073326:CDS | 50.0% | |
| TTGCTGCTGCTGCTGTTCTA+TGG | - | chr8.1:5786636-5786655 | None:intergenic | 50.0% | |
| ! | ACGAGTACATCAGGTGGACT+TGG | + | chr8.1:5787004-5787023 | MS.gene073326:CDS | 50.0% |
| ! | GTTAACTTGGGAGGGAAGGA+AGG | + | chr8.1:5789436-5789455 | MS.gene073326:CDS | 50.0% |
| !! | CCTTTCTGGCTTCAGTCTCA+TGG | + | chr8.1:5787846-5787865 | MS.gene073326:CDS | 50.0% |
| !! | CTTGTGTTGGCTAGAAGGAG+AGG | + | chr8.1:5786344-5786363 | MS.gene073326:CDS | 50.0% |
| !! | GATTGTTGGTGACGGAATCG+AGG | - | chr8.1:5788245-5788264 | None:intergenic | 50.0% |
| GCAGCAGCAGCAACAGCAAA+CGG | + | chr8.1:5786643-5786662 | MS.gene073326:CDS | 55.0% | |
| TGAAGCAGCCTCTGCTGTGA+GGG | - | chr8.1:5786309-5786328 | None:intergenic | 55.0% | |
| CTGAAGCAGCCTCTGCTGTG+AGG | - | chr8.1:5786310-5786329 | None:intergenic | 60.0% | |
| GCAGCAGACCCTCACAGCAG+AGG | + | chr8.1:5786298-5786317 | MS.gene073326:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5786275 | 5789567 | 5786275 | ID=MS.gene073326 |
| chr8.1 | mRNA | 5786275 | 5789567 | 5786275 | ID=MS.gene073326.t1;Parent=MS.gene073326 |
| chr8.1 | exon | 5786275 | 5787047 | 5786275 | ID=MS.gene073326.t1.exon1;Parent=MS.gene073326.t1 |
| chr8.1 | CDS | 5786275 | 5787047 | 5786275 | ID=cds.MS.gene073326.t1;Parent=MS.gene073326.t1 |
| chr8.1 | exon | 5787674 | 5787887 | 5787674 | ID=MS.gene073326.t1.exon2;Parent=MS.gene073326.t1 |
| chr8.1 | CDS | 5787674 | 5787887 | 5787674 | ID=cds.MS.gene073326.t1;Parent=MS.gene073326.t1 |
| chr8.1 | exon | 5788086 | 5789567 | 5788086 | ID=MS.gene073326.t1.exon3;Parent=MS.gene073326.t1 |
| chr8.1 | CDS | 5788086 | 5789567 | 5788086 | ID=cds.MS.gene073326.t1;Parent=MS.gene073326.t1 |
| Gene Sequence |
| Protein sequence |
