Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073783.t1 | XP_013468242.1 | 76.9 | 510 | 87 | 2 | 10 | 488 | 6 | 515 | 1.10E-88 | 337.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073783.t1 | Q9ZQC5 | 26.5 | 388 | 204 | 7 | 160 | 489 | 146 | 510 | 2.6e-12 | 75.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073783.t1 | A0A072VJQ3 | 76.9 | 510 | 87 | 2 | 10 | 488 | 6 | 515 | 8.3e-89 | 337.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073783 | MS.gene54155 | PPI |
| MS.gene073783 | MS.gene56986 | PPI |
| MS.gene073783 | MS.gene065074 | PPI |
| MS.gene073783 | MS.gene50208 | PPI |
| MS.gene073783 | MS.gene063692 | PPI |
| MS.gene073783 | MS.gene03912 | PPI |
| MS.gene073783 | MS.gene39455 | PPI |
| MS.gene073783 | MS.gene31930 | PPI |
| MS.gene073783 | MS.gene26785 | PPI |
| MS.gene073783 | MS.gene31961 | PPI |
| MS.gene073783 | MS.gene037356 | PPI |
| MS.gene073783 | MS.gene68625 | PPI |
| MS.gene073783 | MS.gene39229 | PPI |
| MS.gene073783 | MS.gene76250 | PPI |
| MS.gene073783 | MS.gene029217 | PPI |
| MS.gene073783 | MS.gene008635 | PPI |
| MS.gene073783 | MS.gene015702 | PPI |
| MS.gene073783 | MS.gene029219 | PPI |
| MS.gene073783 | MS.gene034650 | PPI |
| MS.gene33795 | MS.gene073783 | PPI |
| MS.gene073783 | MS.gene57038 | PPI |
| MS.gene073783 | MS.gene020474 | PPI |
| MS.gene073783 | MS.gene93135 | PPI |
| MS.gene073783 | MS.gene009801 | PPI |
| MS.gene073783 | MS.gene030154 | PPI |
| MS.gene073783 | MS.gene05775 | PPI |
| MS.gene073783 | MS.gene048551 | PPI |
| MS.gene073783 | MS.gene064148 | PPI |
| MS.gene073783 | MS.gene23912 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073783.t1 | MTR_1g066850 | 89.015 | 528 | 27 | 3 | 10 | 506 | 6 | 533 | 0.0 | 815 |
| MS.gene073783.t1 | MTR_7g100730 | 55.516 | 562 | 176 | 8 | 10 | 506 | 6 | 558 | 1.84e-164 | 479 |
| MS.gene073783.t1 | MTR_4g461060 | 39.123 | 570 | 268 | 9 | 9 | 503 | 2 | 567 | 7.62e-88 | 282 |
| MS.gene073783.t1 | MTR_4g461060 | 39.883 | 514 | 236 | 6 | 61 | 503 | 59 | 570 | 1.07e-87 | 282 |
| MS.gene073783.t1 | MTR_7g061150 | 52.830 | 318 | 80 | 6 | 249 | 505 | 2 | 310 | 8.19e-73 | 235 |
| MS.gene073783.t1 | MTR_2g093260 | 34.232 | 371 | 156 | 10 | 195 | 502 | 83 | 428 | 1.56e-30 | 124 |
| MS.gene073783.t1 | MTR_5g007350 | 29.304 | 273 | 145 | 9 | 16 | 254 | 38 | 296 | 8.15e-14 | 74.7 |
| MS.gene073783.t1 | MTR_4g478190 | 27.744 | 328 | 191 | 11 | 10 | 291 | 7 | 334 | 6.47e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073783.t1 | AT2G37080 | 43.110 | 566 | 187 | 15 | 11 | 497 | 7 | 516 | 1.98e-106 | 330 |
| MS.gene073783.t1 | AT2G37080 | 42.958 | 568 | 187 | 16 | 11 | 497 | 7 | 518 | 1.52e-104 | 325 |
| MS.gene073783.t1 | AT2G37080 | 42.958 | 568 | 187 | 16 | 11 | 497 | 7 | 518 | 1.52e-104 | 325 |
| MS.gene073783.t1 | AT5G60210 | 34.991 | 543 | 286 | 8 | 6 | 503 | 26 | 546 | 8.81e-72 | 239 |
| MS.gene073783.t1 | AT5G60210 | 34.991 | 543 | 286 | 8 | 6 | 503 | 26 | 546 | 8.81e-72 | 239 |
| MS.gene073783.t1 | AT5G60210 | 35.065 | 539 | 283 | 8 | 10 | 503 | 6 | 522 | 6.03e-71 | 236 |
| MS.gene073783.t1 | AT5G60210 | 35.065 | 539 | 283 | 8 | 10 | 503 | 6 | 522 | 6.03e-71 | 236 |
| MS.gene073783.t1 | AT5G60210 | 35.065 | 539 | 283 | 8 | 10 | 503 | 6 | 522 | 6.03e-71 | 236 |
| MS.gene073783.t1 | AT5G60210 | 35.065 | 539 | 283 | 8 | 10 | 503 | 6 | 522 | 6.03e-71 | 236 |
| MS.gene073783.t1 | AT3G53350 | 36.957 | 322 | 150 | 11 | 5 | 300 | 12 | 306 | 1.68e-43 | 159 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 187 | 381 | 1.67e-27 | 114 |
| MS.gene073783.t1 | AT3G53350 | 37.539 | 317 | 145 | 11 | 10 | 300 | 6 | 295 | 5.56e-43 | 157 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 176 | 370 | 9.42e-28 | 115 |
| MS.gene073783.t1 | AT3G53350 | 37.539 | 317 | 145 | 11 | 10 | 300 | 6 | 295 | 5.56e-43 | 157 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 176 | 370 | 9.42e-28 | 115 |
| MS.gene073783.t1 | AT3G53350 | 36.728 | 324 | 150 | 12 | 5 | 300 | 12 | 308 | 1.08e-41 | 154 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 189 | 383 | 1.65e-27 | 114 |
| MS.gene073783.t1 | AT3G53350 | 36.728 | 324 | 150 | 12 | 5 | 300 | 12 | 308 | 1.08e-41 | 154 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 189 | 383 | 1.65e-27 | 114 |
| MS.gene073783.t1 | AT3G53350 | 37.304 | 319 | 145 | 12 | 10 | 300 | 6 | 297 | 4.91e-41 | 152 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 178 | 372 | 1.17e-27 | 115 |
| MS.gene073783.t1 | AT3G53350 | 37.304 | 319 | 145 | 12 | 10 | 300 | 6 | 297 | 4.91e-41 | 152 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 178 | 372 | 1.17e-27 | 115 |
| MS.gene073783.t1 | AT3G53350 | 37.304 | 319 | 145 | 12 | 10 | 300 | 6 | 297 | 4.91e-41 | 152 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 178 | 372 | 1.17e-27 | 115 |
| MS.gene073783.t1 | AT3G53350 | 34.294 | 347 | 145 | 12 | 10 | 300 | 6 | 325 | 3.00e-37 | 142 |
| MS.gene073783.t1 | AT3G53350 | 39.648 | 227 | 104 | 6 | 279 | 504 | 206 | 400 | 2.86e-27 | 114 |
| MS.gene073783.t1 | AT5G16730 | 28.721 | 383 | 206 | 14 | 23 | 349 | 24 | 395 | 1.11e-11 | 68.2 |
Find 0 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAACAACAATGAAAAATTA+TGG | + | 10810:19365-19384 | MS.gene073783:CDS | 20.0% |
| ! | AATTGCAAAGATGAAAAATG+AGG | + | 10810:18445-18464 | MS.gene073783:CDS | 25.0% |
| ! | CAAATAAAACTCCAAAAGAT+AGG | + | 10810:17699-17718 | MS.gene073783:CDS | 25.0% |
| ! | GAAATTACCAATAATCACAA+TGG | - | 10810:17800-17819 | MS.gene073783:intergenic | 25.0% |
| ! | GTTAGAGAAGAATAAAATCA+CGG | + | 10810:19106-19125 | MS.gene073783:CDS | 25.0% |
| ! | TTAAAATGTACCTCAGATAT+TGG | - | 10810:17752-17771 | MS.gene073783:intergenic | 25.0% |
| !! | TGTGATTATTGGTAATTTCA+TGG | + | 10810:17801-17820 | MS.gene073783:intron | 25.0% |
| AACAAATAGGGTACAAGAAT+TGG | + | 10810:17992-18011 | MS.gene073783:CDS | 30.0% | |
| AACTGAAAATGCAACTTGAA+AGG | + | 10810:18327-18346 | MS.gene073783:CDS | 30.0% | |
| AAGACAAGCTGAATTATATG+AGG | + | 10810:18907-18926 | MS.gene073783:CDS | 30.0% | |
| AAGAGAACAATACACTAAGA+TGG | + | 10810:19067-19086 | MS.gene073783:intron | 30.0% | |
| ACTGAAAATGCAACTTGAAA+GGG | + | 10810:18328-18347 | MS.gene073783:CDS | 30.0% | |
| AGAACTAAGGAAAATTTCTC+AGG | + | 10810:18208-18227 | MS.gene073783:CDS | 30.0% | |
| ATTTGAAGGAGATTTCTTTC+GGG | - | 10810:17609-17628 | MS.gene073783:intergenic | 30.0% | |
| GATTTGAAGGAGATTTCTTT+CGG | - | 10810:17610-17629 | MS.gene073783:intergenic | 30.0% | |
| GGAATAGATAACTAGATACT+TGG | + | 10810:17831-17850 | MS.gene073783:intron | 30.0% | |
| TAAGATGGAAATAAAGAGAG+AGG | + | 10810:19082-19101 | MS.gene073783:CDS | 30.0% | |
| TAGAGGCAATATATTCATGA+AGG | - | 10810:17871-17890 | MS.gene073783:intergenic | 30.0% | |
| TGAAAAATTATGGAGAGAAC+TGG | + | 10810:19375-19394 | MS.gene073783:CDS | 30.0% | |
| ! | AGCTTTTATCTTCAATGACT+CGG | - | 10810:18078-18097 | MS.gene073783:intergenic | 30.0% |
| !! | CTTTAGAGTTAGAGAAATCA+AGG | + | 10810:18606-18625 | MS.gene073783:CDS | 30.0% |
| !! | TTAGATTTTGCTATGCATAG+AGG | - | 10810:17888-17907 | MS.gene073783:intergenic | 30.0% |
| !! | TTTCTCTAACTCTAAAGCTA+AGG | - | 10810:18603-18622 | MS.gene073783:intergenic | 30.0% |
| !! | TTTGTGTTGACTTGACATTT+GGG | - | 10810:17727-17746 | MS.gene073783:intergenic | 30.0% |
| !!! | CTTTTGGAGTTTTATTTGCT+GGG | - | 10810:17697-17716 | MS.gene073783:intergenic | 30.0% |
| !!! | TCTTTTGGAGTTTTATTTGC+TGG | - | 10810:17698-17717 | MS.gene073783:intergenic | 30.0% |
| AACACAAAGTCCAATATCTG+AGG | + | 10810:17739-17758 | MS.gene073783:CDS | 35.0% | |
| AATAATCACAATGGCACCAA+AGG | - | 10810:17791-17810 | MS.gene073783:intergenic | 35.0% | |
| AATTCGCTCATCTTCAGAAT+TGG | - | 10810:18186-18205 | MS.gene073783:intergenic | 35.0% | |
| AGAAATCTCCTTCAAATCCT+CGG | + | 10810:17612-17631 | MS.gene073783:CDS | 35.0% | |
| AGAGGTAGACAAAAATGTCA+AGG | - | 10810:17962-17981 | MS.gene073783:intergenic | 35.0% | |
| ATGAGCGAATTCAAGAACTA+AGG | + | 10810:18195-18214 | MS.gene073783:CDS | 35.0% | |
| CTAGAAGAACGGAACAAATA+GGG | + | 10810:17980-17999 | MS.gene073783:intron | 35.0% | |
| GAAGAATAAAATCACGGATG+AGG | + | 10810:19112-19131 | MS.gene073783:CDS | 35.0% | |
| GAAGATAAAAGCTCAACATG+AGG | + | 10810:18085-18104 | MS.gene073783:CDS | 35.0% | |
| GTGATTCAGATTCTCTACAA+TGG | - | 10810:18475-18494 | MS.gene073783:intergenic | 35.0% | |
| GTTCCTATAAGACTTACCTT+TGG | + | 10810:17772-17791 | MS.gene073783:intron | 35.0% | |
| TAGTACAACTCAAGTGCAAT+TGG | + | 10810:18511-18530 | MS.gene073783:CDS | 35.0% | |
| TATTTGTTCCGTTCTTCTAG+AGG | - | 10810:17980-17999 | MS.gene073783:intergenic | 35.0% | |
| TCAGTTACACGTCTATCATT+CGG | - | 10810:19226-19245 | MS.gene073783:intergenic | 35.0% | |
| TCATTTGCAAGATAGTGATG+TGG | + | 10810:18990-19009 | MS.gene073783:intron | 35.0% | |
| TCTAGAAGAACGGAACAAAT+AGG | + | 10810:17979-17998 | MS.gene073783:intron | 35.0% | |
| TGAAAGTTCAGTCAGATCAA+TGG | + | 10810:19302-19321 | MS.gene073783:CDS | 35.0% | |
| TGGTAATTTCATGGATGCAT+TGG | + | 10810:17810-17829 | MS.gene073783:intron | 35.0% | |
| TTCTAATCTGCAATGTGCTT+TGG | - | 10810:18844-18863 | MS.gene073783:intergenic | 35.0% | |
| TTGTAGAGAATCTGAATCAC+AGG | + | 10810:18475-18494 | MS.gene073783:CDS | 35.0% | |
| TTTATCCATGTCAAGAGAGT+TGG | + | 10810:18130-18149 | MS.gene073783:CDS | 35.0% | |
| TTTCAGTTAAAGCTGAAGCA+GGG | + | 10810:18765-18784 | MS.gene073783:CDS | 35.0% | |
| TTTGAAGGAGATTTCTTTCG+GGG | - | 10810:17608-17627 | MS.gene073783:intergenic | 35.0% | |
| ! | AGCTTTAACTGAAACAAGCT+CGG | - | 10810:18759-18778 | MS.gene073783:intergenic | 35.0% |
| ! | CAAGTTGCATTTTCAGTTTC+TGG | - | 10810:18325-18344 | MS.gene073783:intergenic | 35.0% |
| ! | TGAGTTGAAGGCAAGATTAT+TGG | + | 10810:19014-19033 | MS.gene073783:intron | 35.0% |
| ! | TTATTTGCTGGGTTTGAAGA+CGG | - | 10810:17686-17705 | MS.gene073783:intergenic | 35.0% |
| ! | TTTGTCTACCTCTAGAAGAA+CGG | + | 10810:17969-17988 | MS.gene073783:intron | 35.0% |
| !! | CTAACTCTAAAGCTAAGGAT+TGG | - | 10810:18598-18617 | MS.gene073783:intergenic | 35.0% |
| !! | CTTTGTGTTGACTTGACATT+TGG | - | 10810:17728-17747 | MS.gene073783:intergenic | 35.0% |
| !! | TTTGGTGCCATTGTGATTAT+TGG | + | 10810:17790-17809 | MS.gene073783:intron | 35.0% |
| AAGCCGATGTTGAAGAGTTA+AGG | + | 10810:18945-18964 | MS.gene073783:CDS | 40.0% | |
| AAGGTCTCAAGTAAACTCAC+TGG | + | 10810:18625-18644 | MS.gene073783:CDS | 40.0% | |
| AAGTTCAGTCAGATCAATGG+AGG | + | 10810:19305-19324 | MS.gene073783:CDS | 40.0% | |
| AGAATCTGAATCACAGGCAT+TGG | + | 10810:18481-18500 | MS.gene073783:CDS | 40.0% | |
| AGCCGATGTTGAAGAGTTAA+GGG | + | 10810:18946-18965 | MS.gene073783:CDS | 40.0% | |
| AGGCTGAAGATGCAAAGAAT+CGG | + | 10810:18105-18124 | MS.gene073783:CDS | 40.0% | |
| AGGGCAGTTAAAATCTGCAT+TGG | + | 10810:18784-18803 | MS.gene073783:CDS | 40.0% | |
| AGTCCAGAAACAGCATTCAA+TGG | + | 10810:18265-18284 | MS.gene073783:CDS | 40.0% | |
| ATGCTGAGATTCAAGACTTG+AGG | + | 10810:18396-18415 | MS.gene073783:CDS | 40.0% | |
| ATTGGAAGTTGTAGAAAGCG+AGG | + | 10810:18715-18734 | MS.gene073783:CDS | 40.0% | |
| CTCGTTCTGATATCTTACCT+CGG | - | 10810:18816-18835 | MS.gene073783:intergenic | 40.0% | |
| CTTTCTACAACTTCCAATGC+AGG | - | 10810:18713-18732 | MS.gene073783:intergenic | 40.0% | |
| GAATGATAGACGTGTAACTG+AGG | + | 10810:19225-19244 | MS.gene073783:intron | 40.0% | |
| GTTTCAGTTAAAGCTGAAGC+AGG | + | 10810:18764-18783 | MS.gene073783:CDS | 40.0% | |
| TAGAAAGCGAGGAGATAAAC+CGG | + | 10810:18726-18745 | MS.gene073783:CDS | 40.0% | |
| TGAGATTCAAGACTTGAGGA+TGG | + | 10810:18400-18419 | MS.gene073783:CDS | 40.0% | |
| TGCCCTTAACTCTTCAACAT+CGG | - | 10810:18951-18970 | MS.gene073783:intergenic | 40.0% | |
| TGGAGTTAGAGGCTGAATTA+AGG | + | 10810:19275-19294 | MS.gene073783:CDS | 40.0% | |
| ! | ACATTTGGGCTCCTATCTTT+TGG | - | 10810:17713-17732 | MS.gene073783:intergenic | 40.0% |
| ! | ACGCTTTTGCACCTTCTAAT+CGG | - | 10810:18565-18584 | MS.gene073783:intergenic | 40.0% |
| ! | AGAGTTAAGGGCACAATTGA+TGG | + | 10810:18958-18977 | MS.gene073783:CDS | 40.0% |
| ! | GCACCAAAGGTAAGTCTTAT+AGG | - | 10810:17778-17797 | MS.gene073783:intergenic | 40.0% |
| !! | AGTCCATTGAATGCTGTTTC+TGG | - | 10810:18271-18290 | MS.gene073783:intergenic | 40.0% |
| ACGACTGGAGAACACGAAAT+CGG | + | 10810:18874-18893 | MS.gene073783:CDS | 45.0% | |
| ACTTGTGAGCAAACTTCAGG+AGG | + | 10810:18652-18671 | MS.gene073783:CDS | 45.0% | |
| AGAATGGCAGTCTGAACTAG+AGG | + | 10810:18241-18260 | MS.gene073783:CDS | 45.0% | |
| ATCCATGTCAAGAGAGTTGG+AGG | + | 10810:18133-18152 | MS.gene073783:CDS | 45.0% | |
| ATTGTCAATCCGGGTAGCTT+CGG | - | 10810:18363-18382 | MS.gene073783:intergenic | 45.0% | |
| CTGACTCAGCATTGTCAATC+CGG | - | 10810:18373-18392 | MS.gene073783:intergenic | 45.0% | |
| GAGCAAACTTCAGGAGGATT+TGG | + | 10810:18658-18677 | MS.gene073783:CDS | 45.0% | |
| GCTGCTGCTATGATTTCTTC+TGG | + | 10810:19343-19362 | MS.gene073783:CDS | 45.0% | |
| GGAACTTGTGAGCAAACTTC+AGG | + | 10810:18649-18668 | MS.gene073783:CDS | 45.0% | |
| GGAAGCTGCAAATAAGACAG+TGG | + | 10810:18532-18551 | MS.gene073783:CDS | 45.0% | |
| GGGTACAAGAATTGGAGTCT+CGG | + | 10810:18000-18019 | MS.gene073783:CDS | 45.0% | |
| GTCTCAAGTAAACTCACTGG+AGG | + | 10810:18628-18647 | MS.gene073783:CDS | 45.0% | |
| TGACTCAGCATTGTCAATCC+GGG | - | 10810:18372-18391 | MS.gene073783:intergenic | 45.0% | |
| TTCCTCCAACTCTCTTGACA+TGG | - | 10810:18138-18157 | MS.gene073783:intergenic | 45.0% | |
| ! | GAGGATTTGGTCAGTAGAGT+TGG | + | 10810:18671-18690 | MS.gene073783:CDS | 45.0% |
| ! | TAGTGATGTGGCTGAGTTGA+AGG | + | 10810:19002-19021 | MS.gene073783:intron | 45.0% |
| !! | TAGAAGTGCCTTTGAACGAC+TGG | + | 10810:18859-18878 | MS.gene073783:CDS | 45.0% |
| ACTTCCAATGCAGGTAAGCG+AGG | - | 10810:18704-18723 | MS.gene073783:intergenic | 50.0% | |
| ATCTCCTCGCTTACCTGCAT+TGG | + | 10810:18697-18716 | MS.gene073783:CDS | 50.0% | |
| CAGACTGCCATTCTCGATCT+CGG | - | 10810:18235-18254 | MS.gene073783:intergenic | 50.0% | |
| CGTGTTCTCCAGTCGTTCAA+AGG | - | 10810:18870-18889 | MS.gene073783:intergenic | 50.0% | |
| GAGAGTTGGAGGAATCACAG+CGG | + | 10810:18144-18163 | MS.gene073783:CDS | 50.0% | |
| GTGAGCAGAAATGGTGCATC+AGG | + | 10810:17578-17597 | MS.gene073783:CDS | 50.0% | |
| GTGGAAACGCTCCGATTAGA+AGG | + | 10810:18551-18570 | MS.gene073783:CDS | 50.0% | |
| TGAGGAGTTAGATGCTGCAC+AGG | + | 10810:19243-19262 | MS.gene073783:intron | 50.0% | |
| ! | GGCGTCGAATTTGGAGTTAG+AGG | + | 10810:19264-19283 | MS.gene073783:intron | 50.0% |
| ! | TGGTTGGCTGTGAGCAGAAA+TGG | + | 10810:17569-17588 | MS.gene073783:CDS | 50.0% |
| !! | AAACAAGCTCGGCTTTGAGC+CGG | - | 10810:18748-18767 | MS.gene073783:intergenic | 50.0% |
| ATCTGCATTGGATGCTGCCG+AGG | + | 10810:18796-18815 | MS.gene073783:CDS | 55.0% | |
| CACGTGAATCCGAAGCTACC+CGG | + | 10810:18351-18370 | MS.gene073783:CDS | 55.0% | |
| CGAGCAGTCCGAGGATTTGA+AGG | - | 10810:17623-17642 | MS.gene073783:intergenic | 55.0% | |
| CTCAGGACCGAGATCGAGAA+TGG | + | 10810:18225-18244 | MS.gene073783:CDS | 55.0% | |
| GCTCGCAAGACGAAGTCATC+AGG | + | 10810:17638-17657 | MS.gene073783:CDS | 55.0% | |
| GGAATCACAGCGGCAACTTC+TGG | + | 10810:18154-18173 | MS.gene073783:CDS | 55.0% | |
| TGGGTTTGAAGACGGCGAAG+CGG | - | 10810:17678-17697 | MS.gene073783:intergenic | 55.0% | |
| TGTCAAAGCCTCTCGCTCTG+CGG | - | 10810:19165-19184 | MS.gene073783:intergenic | 55.0% | |
| !! | TGCTGCACAGGCGTCGAATT+TGG | + | 10810:19255-19274 | MS.gene073783:intron | 55.0% |
| TGCTTCCGCTGAGGCAGCAA+GGG | + | 10810:19139-19158 | MS.gene073783:CDS | 60.0% | |
| TTCGTCTTGCGAGCAGTCCG+AGG | - | 10810:17632-17651 | MS.gene073783:intergenic | 60.0% | |
| TTGCTTCCGCTGAGGCAGCA+AGG | + | 10810:19138-19157 | MS.gene073783:CDS | 60.0% | |
| ! | TGAGGCTGTTGCTTCCGCTG+AGG | + | 10810:19130-19149 | MS.gene073783:CDS | 60.0% |
| AGCAAGGGCCGCAGAGCGAG+AGG | + | 10810:19154-19173 | MS.gene073783:CDS | 70.0% | |
| TGCGGCCCTTGCTGCCTCAG+CGG | - | 10810:19147-19166 | MS.gene073783:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10810 | gene | 17554 | 19408 | 17554 | ID=MS.gene073783 |
| 10810 | mRNA | 17554 | 19408 | 17554 | ID=MS.gene073783.t1;Parent=MS.gene073783 |
| 10810 | exon | 17554 | 17760 | 17554 | ID=MS.gene073783.t1.exon1;Parent=MS.gene073783.t1 |
| 10810 | CDS | 17554 | 17760 | 17554 | ID=cds.MS.gene073783.t1;Parent=MS.gene073783.t1 |
| 10810 | exon | 17984 | 19008 | 17984 | ID=MS.gene073783.t1.exon2;Parent=MS.gene073783.t1 |
| 10810 | CDS | 17984 | 19008 | 17984 | ID=cds.MS.gene073783.t1;Parent=MS.gene073783.t1 |
| 10810 | exon | 19070 | 19235 | 19070 | ID=MS.gene073783.t1.exon3;Parent=MS.gene073783.t1 |
| 10810 | CDS | 19070 | 19235 | 19070 | ID=cds.MS.gene073783.t1;Parent=MS.gene073783.t1 |
| 10810 | exon | 19265 | 19408 | 19265 | ID=MS.gene073783.t1.exon4;Parent=MS.gene073783.t1 |
| 10810 | CDS | 19265 | 19408 | 19265 | ID=cds.MS.gene073783.t1;Parent=MS.gene073783.t1 |
| Gene Sequence |
| Protein sequence |
