Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073831.t1 | XP_013468301.1 | 92.9 | 931 | 66 | 0 | 42 | 972 | 19 | 949 | 0.00E+00 | 1667.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073831.t1 | A0A072VLQ7 | 92.9 | 931 | 66 | 0 | 42 | 972 | 19 | 949 | 0.0e+00 | 1667.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene073831 | 0.856526 | 3.03E-62 | -1.69E-46 |
| MS.gene049418 | MS.gene073831 | 0.831434 | 1.67E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene073831 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene073831 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene073831 | 0.826433 | 2.72E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene073831 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene073831 | 0.810342 | 1.21E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene073831 | 0.80788 | 4.07E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene073831 | 0.845195 | 4.72E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene073831 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene073831 | 0.800816 | 1.21E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene073831 | 0.862217 | 5.93E-64 | -1.69E-46 |
| MS.gene055512 | MS.gene073831 | 0.815074 | 1.11E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene073831 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene073831 | -0.828785 | 7.41E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene073831 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene073831 | 0.817636 | 2.98E-52 | -1.69E-46 |
| MS.gene056542 | MS.gene073831 | 0.811117 | 8.22E-51 | -1.69E-46 |
| MS.gene056543 | MS.gene073831 | 0.821309 | 4.32E-53 | -1.69E-46 |
| MS.gene056545 | MS.gene073831 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene073831 | 0.823561 | 1.30E-53 | -1.69E-46 |
| MS.gene05894 | MS.gene073831 | 0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene059015 | MS.gene073831 | 0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene059154 | MS.gene073831 | 0.83598 | 1.22E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene073831 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene073831 | 0.819437 | 1.16E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene073831 | 0.824733 | 6.88E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073831.t1 | MTR_1g067570 | 94.629 | 931 | 50 | 0 | 42 | 972 | 19 | 949 | 0.0 | 1738 |
| MS.gene073831.t1 | MTR_5g042180 | 83.663 | 202 | 23 | 3 | 771 | 972 | 92 | 283 | 6.83e-105 | 328 |
| MS.gene073831.t1 | MTR_7g022810 | 32.861 | 353 | 183 | 10 | 654 | 972 | 300 | 632 | 2.47e-32 | 134 |
| MS.gene073831.t1 | MTR_7g099410 | 29.791 | 574 | 278 | 22 | 62 | 571 | 69 | 581 | 9.36e-32 | 134 |
| MS.gene073831.t1 | MTR_7g099410 | 30.162 | 557 | 264 | 22 | 79 | 571 | 5 | 500 | 1.45e-31 | 133 |
| MS.gene073831.t1 | MTR_1g069190 | 26.907 | 472 | 249 | 19 | 96 | 520 | 1 | 423 | 3.47e-19 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073831.t1 | AT3G53540 | 36.598 | 929 | 478 | 29 | 85 | 971 | 61 | 920 | 1.46e-138 | 438 |
| MS.gene073831.t1 | AT3G53540 | 36.491 | 929 | 479 | 29 | 85 | 971 | 92 | 951 | 4.84e-138 | 438 |
| MS.gene073831.t1 | AT4G28760 | 30.561 | 481 | 237 | 16 | 79 | 509 | 82 | 515 | 3.18e-35 | 145 |
| MS.gene073831.t1 | AT4G28760 | 30.561 | 481 | 237 | 16 | 79 | 509 | 82 | 515 | 3.18e-35 | 145 |
| MS.gene073831.t1 | AT2G39435 | 34.050 | 279 | 159 | 9 | 714 | 972 | 190 | 463 | 6.02e-26 | 113 |
| MS.gene073831.t1 | AT2G39435 | 34.050 | 279 | 159 | 9 | 714 | 972 | 190 | 463 | 6.02e-26 | 113 |
| MS.gene073831.t1 | AT2G39435 | 34.050 | 279 | 159 | 9 | 714 | 972 | 190 | 463 | 6.02e-26 | 113 |
| MS.gene073831.t1 | AT2G39435 | 34.050 | 279 | 159 | 9 | 714 | 972 | 190 | 463 | 6.02e-26 | 113 |
| MS.gene073831.t1 | AT2G39435 | 34.050 | 279 | 159 | 9 | 714 | 972 | 190 | 463 | 6.02e-26 | 113 |
| MS.gene073831.t1 | AT5G43880 | 26.834 | 518 | 233 | 22 | 85 | 557 | 66 | 482 | 1.10e-25 | 114 |
| MS.gene073831.t1 | AT5G43880 | 26.834 | 518 | 233 | 22 | 85 | 557 | 66 | 482 | 1.10e-25 | 114 |
| MS.gene073831.t1 | AT5G43880 | 26.834 | 518 | 233 | 22 | 85 | 557 | 66 | 482 | 1.10e-25 | 114 |
| MS.gene073831.t1 | AT5G43880 | 26.834 | 518 | 233 | 22 | 85 | 557 | 66 | 482 | 1.10e-25 | 114 |
| MS.gene073831.t1 | AT2G39435 | 33.333 | 267 | 153 | 9 | 714 | 960 | 190 | 451 | 4.48e-22 | 101 |
| MS.gene073831.t1 | AT2G20240 | 25.618 | 445 | 219 | 14 | 80 | 491 | 12 | 377 | 1.61e-15 | 81.6 |
Find 231 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGTTGTGGGCGGGCTAC+TGG | 0.110591 | 1.3:+47486268 | None:intergenic |
| TTGCAGTTCTCATTTAAATT+TGG | 0.111515 | 1.3:-47484876 | MS.gene073831:intron |
| AATGCTGACATGCACCTTTC+TGG | 0.124676 | 1.3:+47486249 | None:intergenic |
| TCTTCCTCTCCTATATTTAA+AGG | 0.158677 | 1.3:-47483871 | MS.gene073831:CDS |
| CTCTTCTCCTCTCCCGTTTA+AGG | 0.163515 | 1.3:+47483347 | None:intergenic |
| TGTTGTCCTAAAACCTAATA+TGG | 0.174399 | 1.3:-47484133 | MS.gene073831:CDS |
| TCAGCTAATAACTTCTTAAT+TGG | 0.212274 | 1.3:+47484822 | None:intergenic |
| CTAAGGGGCTCAAAGGTTTC+AGG | 0.216196 | 1.3:+47483139 | None:intergenic |
| CTGATAATAATTTGGAAGTT+TGG | 0.219189 | 1.3:-47480873 | MS.gene073831:CDS |
| CCTGCTTCATCTACTGTCTT+TGG | 0.228985 | 1.3:-47483433 | MS.gene073831:CDS |
| CTTCTCTTGGATTCAGTTGC+TGG | 0.236414 | 1.3:+47484789 | None:intergenic |
| TGCTCAAACTGATAATAATT+TGG | 0.237442 | 1.3:-47480881 | MS.gene073831:CDS |
| AAGGGATCAGGAAGAATTTA+AGG | 0.251312 | 1.3:-47484610 | MS.gene073831:CDS |
| TGCAGTTCTCATTTAAATTT+GGG | 0.277047 | 1.3:-47484875 | MS.gene073831:intron |
| GATAGTTCAAGCAGTGCTTC+TGG | 0.278337 | 1.3:-47483835 | MS.gene073831:CDS |
| TCATCTTGTTCTGAATGTTT+TGG | 0.281356 | 1.3:-47482091 | MS.gene073831:CDS |
| TGGGTTGTGGGCGGGCTACT+GGG | 0.285745 | 1.3:+47486269 | None:intergenic |
| AGAAATGCAGCCAAACCTTT+TGG | 0.297212 | 1.3:-47480685 | MS.gene073831:CDS |
| GGGTTGTGGGCGGGCTACTG+GGG | 0.306712 | 1.3:+47486270 | None:intergenic |
| TCGGCTCGTGTCTTAGTAAA+AGG | 0.315444 | 1.3:-47483019 | MS.gene073831:CDS |
| TCAGCACGCAAGAATGTTCT+AGG | 0.325404 | 1.3:+47483406 | None:intergenic |
| TCCTTGTGCTGCTTGTTATT+AGG | 0.326961 | 1.3:+47484711 | None:intergenic |
| ATTGATAGTAGATGATTTAG+TGG | 0.328822 | 1.3:-47480506 | MS.gene073831:CDS |
| TTCACCCAATCTTGAGGTTC+AGG | 0.330620 | 1.3:-47483164 | MS.gene073831:CDS |
| ATGTTCAAAGTTCTCCATAT+TGG | 0.331456 | 1.3:+47484290 | None:intergenic |
| GAAAGGTGCATGTCAGCATT+TGG | 0.331531 | 1.3:-47486246 | MS.gene073831:CDS |
| TCAGCATGATTTCCATGTTC+TGG | 0.336312 | 1.3:+47484051 | None:intergenic |
| CTCTCCCGTTTAAGGTCCTT+TGG | 0.339239 | 1.3:+47483355 | None:intergenic |
| TCTTCGGATAAGGTTCTTCC+TGG | 0.346250 | 1.3:-47483046 | MS.gene073831:CDS |
| TTCTGAATCTTCTTCGGATA+AGG | 0.357900 | 1.3:-47483056 | MS.gene073831:CDS |
| TACCAGTTTCCTTACCTTGT+AGG | 0.359838 | 1.3:+47482053 | None:intergenic |
| ACTTCGTAATGATCGATATA+TGG | 0.362032 | 1.3:-47483380 | MS.gene073831:CDS |
| ACATGCACCTTTCTGGGTTG+TGG | 0.366998 | 1.3:+47486256 | None:intergenic |
| AAAGTTGCTGTTATTTCCTC+TGG | 0.371025 | 1.3:+47483802 | None:intergenic |
| TGTTAGAAGGAAATACATTA+TGG | 0.371730 | 1.3:-47480969 | MS.gene073831:CDS |
| ATTCATTGAACAGAAGTTCA+TGG | 0.372969 | 1.3:-47484502 | MS.gene073831:CDS |
| AGAGATGACATTGATGTAAT+AGG | 0.373309 | 1.3:-47480544 | MS.gene073831:CDS |
| TACCTACCACTCTCTGCCTT+TGG | 0.373777 | 1.3:+47484564 | None:intergenic |
| TTCCTTGGTTCCCTAGCATC+TGG | 0.374335 | 1.3:+47480626 | None:intergenic |
| CTAGAGTATCCTTTAAATAT+AGG | 0.374512 | 1.3:+47483862 | None:intergenic |
| ACAACAATCTTTGACGATCT+TGG | 0.374861 | 1.3:+47484150 | None:intergenic |
| TCATGTAGAACCAACCAATA+TGG | 0.376303 | 1.3:-47484304 | MS.gene073831:CDS |
| CACCTTTCTGGGTTGTGGGC+GGG | 0.379075 | 1.3:+47486261 | None:intergenic |
| TGTTTCTGTGTTTGAAGATC+TGG | 0.379454 | 1.3:-47480827 | MS.gene073831:CDS |
| CGCTAGGCAGGCTGTCAAAA+CGG | 0.380177 | 1.3:+47483584 | None:intergenic |
| CATCATCCTCTACCTTTCCT+TGG | 0.391677 | 1.3:+47480611 | None:intergenic |
| ATGCTGACATGCACCTTTCT+GGG | 0.392094 | 1.3:+47486250 | None:intergenic |
| GTGATTTGACTACTTGTTCA+AGG | 0.392537 | 1.3:-47480792 | MS.gene073831:CDS |
| GCATTTCTCACCCATGGCTG+TGG | 0.400191 | 1.3:+47480700 | None:intergenic |
| GTGGAAATCTTCTAAACAAT+CGG | 0.401053 | 1.3:-47484853 | MS.gene073831:CDS |
| ACCTACCACTCTCTGCCTTT+GGG | 0.402163 | 1.3:+47484565 | None:intergenic |
| GGGTGAATCTTCTTCAAGAT+TGG | 0.403956 | 1.3:+47483180 | None:intergenic |
| CAGATTCCAACTTCAGCAAC+TGG | 0.404643 | 1.3:+47481058 | None:intergenic |
| AACACCTGGGGATCTTCTCT+TGG | 0.405633 | 1.3:+47484776 | None:intergenic |
| AGAGGAAATAACAGCAACTT+TGG | 0.406142 | 1.3:-47483800 | MS.gene073831:CDS |
| AAAGGTGCATGTCAGCATTT+GGG | 0.408754 | 1.3:-47486245 | MS.gene073831:CDS |
| ACCCCTTTCCAATCACATTC+CGG | 0.411094 | 1.3:-47484327 | MS.gene073831:CDS |
| ATTTCAATTTGAGGTCAGAT+AGG | 0.413621 | 1.3:-47484266 | MS.gene073831:CDS |
| TTGATATGTCGCTAGGCGTT+TGG | 0.413769 | 1.3:+47484476 | None:intergenic |
| AATTCTAGAAGCACAATATC+TGG | 0.414534 | 1.3:-47483292 | MS.gene073831:CDS |
| CATGCACCTTTCTGGGTTGT+GGG | 0.419173 | 1.3:+47486257 | None:intergenic |
| TGGTGCCAAAGGACCTTAAA+CGG | 0.420078 | 1.3:-47483360 | MS.gene073831:CDS |
| TGGGCCTTCTGAATCTTCTT+CGG | 0.420630 | 1.3:-47483062 | MS.gene073831:CDS |
| AGGAGCCTGAACCTCAAGAT+TGG | 0.421532 | 1.3:+47483159 | None:intergenic |
| GAAGGATCAAGAACAGAGAT+TGG | 0.424727 | 1.3:+47482130 | None:intergenic |
| AGCCAATGTGCTGCTCCTGC+TGG | 0.428930 | 1.3:+47483645 | None:intergenic |
| TTCTGAGTTGGTTGAACCAC+TGG | 0.431879 | 1.3:-47483521 | MS.gene073831:CDS |
| GCTAGGCAGGCTGTCAAAAC+GGG | 0.434829 | 1.3:+47483585 | None:intergenic |
| TAGGAGGAGCTCAAGGGATC+AGG | 0.437081 | 1.3:-47484622 | MS.gene073831:CDS |
| GGTTGTGGGCGGGCTACTGG+GGG | 0.437607 | 1.3:+47486271 | None:intergenic |
| AGAATTTAAGGATGTATTTG+AGG | 0.444098 | 1.3:-47484598 | MS.gene073831:CDS |
| ATAGTTCAAGCAGTGCTTCT+GGG | 0.448499 | 1.3:-47483834 | MS.gene073831:CDS |
| GACGTATCAGCTGGTTCTAC+TGG | 0.450301 | 1.3:-47482229 | MS.gene073831:CDS |
| GTATCTTCTGAAATGTTAGA+AGG | 0.450334 | 1.3:-47480982 | MS.gene073831:CDS |
| TTGAACATGATTTCAATTTG+AGG | 0.450676 | 1.3:-47484275 | MS.gene073831:CDS |
| CAACAGGGGTGAATTACAAC+AGG | 0.452060 | 1.3:-47484239 | MS.gene073831:CDS |
| GTATTCATCTTCAGATTTGA+AGG | 0.452350 | 1.3:-47484544 | MS.gene073831:CDS |
| TATGGAGAACTGAAGATAGC+TGG | 0.453058 | 1.3:-47480951 | MS.gene073831:CDS |
| CTACATGACCGGAATGTGAT+TGG | 0.453884 | 1.3:+47484319 | None:intergenic |
| TTGGCTGCATTTCTCACCCA+TGG | 0.454936 | 1.3:+47480694 | None:intergenic |
| AGGTCAGATAGGGAGTCAAC+AGG | 0.455232 | 1.3:-47484255 | MS.gene073831:CDS |
| GTCTGTGCATTCACTGAAGC+AGG | 0.455725 | 1.3:-47483254 | MS.gene073831:CDS |
| CAGCATGGAGATTCATGTCC+AGG | 0.460685 | 1.3:+47482175 | None:intergenic |
| CTATGTCTATTTAAGTCAAA+CGG | 0.461553 | 1.3:+47483772 | None:intergenic |
| CTCTCTGAAGCACCTGTACC+TGG | 0.463051 | 1.3:-47482193 | MS.gene073831:CDS |
| TCTCCTGATTCTAGTTTCTC+CGG | 0.466591 | 1.3:-47485104 | MS.gene073831:CDS |
| AAAGGTAGAGGATGATGTCC+TGG | 0.466697 | 1.3:-47480605 | MS.gene073831:CDS |
| GACCGGAATGTGATTGGAAA+GGG | 0.468052 | 1.3:+47484325 | None:intergenic |
| CTAAAAGACCTTGCACTGTC+AGG | 0.468134 | 1.3:+47483976 | None:intergenic |
| TGTTTGAAGATCTGGAAGAT+AGG | 0.481147 | 1.3:-47480819 | MS.gene073831:CDS |
| GACAGCCTGCCTAGCGGGGA+AGG | 0.481337 | 1.3:-47483577 | MS.gene073831:CDS |
| TATCAAATGAAAACACTGTT+GGG | 0.482329 | 1.3:-47483081 | MS.gene073831:CDS |
| GAGGAAATAACAGCAACTTT+GGG | 0.485008 | 1.3:-47483799 | MS.gene073831:CDS |
| GCAACTCCAGTTGCTGAAGT+TGG | 0.486560 | 1.3:-47481064 | MS.gene073831:CDS |
| TCATAAACAGCAACAACATC+CGG | 0.487223 | 1.3:-47485132 | MS.gene073831:CDS |
| GCACCTTTCTGGGTTGTGGG+CGG | 0.488125 | 1.3:+47486260 | None:intergenic |
| GTACCCTTCATTCTCTTACC+AGG | 0.488941 | 1.3:+47483607 | None:intergenic |
| AGGTGTTATAGCTAGATTGA+TGG | 0.492264 | 1.3:-47484760 | MS.gene073831:CDS |
| CAACGGCGAACCTTCTGAGT+TGG | 0.495337 | 1.3:-47483533 | MS.gene073831:CDS |
| TGAAACCTTCCCCGCTAGGC+AGG | 0.495785 | 1.3:+47483572 | None:intergenic |
| CTAGAATCAGGAGAGAAATC+CGG | 0.500407 | 1.3:+47485113 | None:intergenic |
| CCACCGGAGAAACTAGAATC+AGG | 0.500712 | 1.3:+47485101 | None:intergenic |
| GATCGTCTAGGAGGAGCTCA+AGG | 0.502385 | 1.3:-47484629 | MS.gene073831:CDS |
| GACAGATCATCTGTAAAAGA+AGG | 0.502791 | 1.3:+47482112 | None:intergenic |
| ATTGGTTGGTTCTACATGAC+CGG | 0.509610 | 1.3:+47484308 | None:intergenic |
| AAGAGGTGCAAGGCACCAGC+AGG | 0.509861 | 1.3:-47483660 | MS.gene073831:CDS |
| CGAAGAAAATTCAATGCAAG+AGG | 0.512210 | 1.3:-47482978 | MS.gene073831:intron |
| CCTCACACGTGTCACTGCCT+TGG | 0.513625 | 1.3:+47486333 | None:intergenic |
| AAGACACGAGCCGATGATCC+AGG | 0.514598 | 1.3:+47483028 | None:intergenic |
| AAGCATCGCGATGGTTATCA+TGG | 0.515516 | 1.3:-47484207 | MS.gene073831:CDS |
| TTTCTCTGCAACCTTGCCAC+CGG | 0.516407 | 1.3:+47485085 | None:intergenic |
| GGAGCCTGAACCTCAAGATT+GGG | 0.516857 | 1.3:+47483160 | None:intergenic |
| TTCTAGTTTCTCCGGTGGCA+AGG | 0.517530 | 1.3:-47485096 | MS.gene073831:CDS |
| ATTATCAGAGAGGTGGAAGA+TGG | 0.517782 | 1.3:-47483695 | MS.gene073831:CDS |
| ATATTTCAGGACGTATCAGC+TGG | 0.518195 | 1.3:-47482238 | MS.gene073831:intron |
| GCTAGATTGATGGGTCTTGA+CGG | 0.518416 | 1.3:-47484750 | MS.gene073831:CDS |
| TCATTGAAACCTTCCCCGCT+AGG | 0.518789 | 1.3:+47483568 | None:intergenic |
| GCTGATATGCTAGCGTTCCC+TGG | 0.518873 | 1.3:-47483625 | MS.gene073831:CDS |
| GTATCAAATGAAAACACTGT+TGG | 0.522003 | 1.3:-47483082 | MS.gene073831:CDS |
| CTGGGTATCAGCAGCAAGGA+TGG | 0.522721 | 1.3:-47483502 | MS.gene073831:CDS |
| CTACTTGTTCAAGGTCTGAA+AGG | 0.522940 | 1.3:-47480783 | MS.gene073831:CDS |
| CCAACGCCTCAAGTGTATCA+TGG | 0.523411 | 1.3:+47484430 | None:intergenic |
| GTTGTCCTAAAACCTAATAT+GGG | 0.523452 | 1.3:-47484132 | MS.gene073831:CDS |
| CCATGATACACTTGAGGCGT+TGG | 0.524158 | 1.3:-47484430 | MS.gene073831:CDS |
| CATTTCTCACCCATGGCTGT+GGG | 0.524711 | 1.3:+47480701 | None:intergenic |
| ATCAATCTAGCTATAACACC+TGG | 0.525093 | 1.3:+47484762 | None:intergenic |
| AGCCCGCCCACAACCCAGAA+AGG | 0.526197 | 1.3:-47486263 | MS.gene073831:CDS |
| GGTGCCAAAGGACCTTAAAC+GGG | 0.527205 | 1.3:-47483359 | MS.gene073831:CDS |
| GGAGATTCATGTCCAGGTAC+AGG | 0.532375 | 1.3:+47482181 | None:intergenic |
| TGGAAATCTTCTAAACAATC+GGG | 0.532665 | 1.3:-47484852 | MS.gene073831:CDS |
| TTTATCTCTAAGGGGCTCAA+AGG | 0.532888 | 1.3:+47483132 | None:intergenic |
| TTTCAATTTGAGGTCAGATA+GGG | 0.533938 | 1.3:-47484265 | MS.gene073831:CDS |
| TATCTGGTCACAAGAAGTCT+TGG | 0.534254 | 1.3:-47483276 | MS.gene073831:CDS |
| ATCTACTGACCCACAGCCAT+GGG | 0.534736 | 1.3:-47480710 | MS.gene073831:CDS |
| CAAGGTTGCAGAGAAAGATT+CGG | 0.535082 | 1.3:-47485078 | MS.gene073831:intron |
| CCAAAGACAGTAGATGAAGC+AGG | 0.535618 | 1.3:+47483433 | None:intergenic |
| GGTGTTATAGCTAGATTGAT+GGG | 0.536964 | 1.3:-47484759 | MS.gene073831:CDS |
| TTCTGCTAAAATACTTCAAG+CGG | 0.538802 | 1.3:-47484392 | MS.gene073831:CDS |
| ATGATTAACGGGCTTCAAGA+TGG | 0.541073 | 1.3:-47480655 | MS.gene073831:CDS |
| TACCCTTCATTCTCTTACCA+GGG | 0.542493 | 1.3:+47483608 | None:intergenic |
| GGCAGTGACACGTGTGAGGA+AGG | 0.544392 | 1.3:-47486329 | MS.gene073831:CDS |
| TAAGGTTCTTCCTGGATCAT+CGG | 0.545547 | 1.3:-47483038 | MS.gene073831:CDS |
| TCAAAGTTCTCCATATTGGT+TGG | 0.546294 | 1.3:+47484294 | None:intergenic |
| GGTCAGATAGGGAGTCAACA+GGG | 0.546327 | 1.3:-47484254 | MS.gene073831:CDS |
| AGAAGAGATTATCAGAGAGG+TGG | 0.548636 | 1.3:-47483702 | MS.gene073831:CDS |
| AGAAAATTATGCGGAGAACA+AGG | 0.550019 | 1.3:+47484075 | None:intergenic |
| CACCAGCAGGAGCAGCACAT+TGG | 0.551873 | 1.3:-47483647 | MS.gene073831:CDS |
| CCTCAATCAGCAACTTGCCC+AGG | 0.553535 | 1.3:+47480587 | None:intergenic |
| TAAATTTGCCTGACAGTGCA+AGG | 0.555917 | 1.3:-47483984 | MS.gene073831:CDS |
| CCTGGGCAAGTTGCTGATTG+AGG | 0.558438 | 1.3:-47480587 | MS.gene073831:CDS |
| ATGGAGAACTGAAGATAGCT+GGG | 0.559618 | 1.3:-47480950 | MS.gene073831:CDS |
| TCATCTTCAGATTTGAAGGA+CGG | 0.560308 | 1.3:-47484540 | MS.gene073831:CDS |
| GAAAATCTTGATATGTCGCT+AGG | 0.561019 | 1.3:+47484469 | None:intergenic |
| GTATCAGCAGCAAGGATGGT+TGG | 0.563267 | 1.3:-47483498 | MS.gene073831:CDS |
| AATGATAAGTTTGCTCGCAA+CGG | 0.566185 | 1.3:-47483550 | MS.gene073831:CDS |
| GTTCCCTGGTAAGAGAATGA+AGG | 0.568397 | 1.3:-47483611 | MS.gene073831:CDS |
| AATCTACTGACCCACAGCCA+TGG | 0.575881 | 1.3:-47480711 | MS.gene073831:CDS |
| AGTTGCTGATTGAGGAGTCT+CGG | 0.577954 | 1.3:-47480579 | MS.gene073831:CDS |
| GTCTTGACGGTCTTCCATCT+CGG | 0.580676 | 1.3:-47484737 | MS.gene073831:CDS |
| ATCAAGAACAGAGATTGGAC+TGG | 0.580851 | 1.3:+47482135 | None:intergenic |
| GCCTAATAACAAGCAGCACA+AGG | 0.581754 | 1.3:-47484712 | MS.gene073831:CDS |
| AGTTCTCATTTAAATTTGGG+TGG | 0.584733 | 1.3:-47484872 | MS.gene073831:CDS |
| TCTGAGTTGGTTGAACCACT+GGG | 0.584863 | 1.3:-47483520 | MS.gene073831:CDS |
| CAAAGGACCTTAAACGGGAG+AGG | 0.584910 | 1.3:-47483354 | MS.gene073831:CDS |
| AGAAGATTCACCCAATCTTG+AGG | 0.585560 | 1.3:-47483170 | MS.gene073831:CDS |
| AGAAGGTGGTATGGTATCCA+AGG | 0.588253 | 1.3:-47486350 | None:intergenic |
| GTATCAGCTGGTTCTACTGG+TGG | 0.588755 | 1.3:-47482226 | MS.gene073831:CDS |
| TTCCCTGGTAAGAGAATGAA+GGG | 0.592385 | 1.3:-47483610 | MS.gene073831:CDS |
| TCCCAAAGGCAGAGAGTGGT+AGG | 0.592588 | 1.3:-47484566 | MS.gene073831:CDS |
| TGACCGGAATGTGATTGGAA+AGG | 0.595190 | 1.3:+47484324 | None:intergenic |
| TCAAGAACAGAGATTGGACT+GGG | 0.595338 | 1.3:+47482136 | None:intergenic |
| CTAGTTTCAAGTGACGAAGA+TGG | 0.596738 | 1.3:-47481012 | MS.gene073831:CDS |
| TGATCGATATATGGTGCCAA+AGG | 0.596759 | 1.3:-47483371 | MS.gene073831:CDS |
| AGGGAACCAAGGAAAGGTAG+AGG | 0.597684 | 1.3:-47480617 | MS.gene073831:CDS |
| TTCCAGATGCTAGGGAACCA+AGG | 0.597921 | 1.3:-47480628 | MS.gene073831:CDS |
| TGATCAGCATCTTTACAGCA+TGG | 0.598824 | 1.3:+47482160 | None:intergenic |
| TCAGCAGCAAGGATGGTTGG+AGG | 0.599245 | 1.3:-47483495 | MS.gene073831:CDS |
| TGAATCATCTGTGAGTAGAG+AGG | 0.600520 | 1.3:-47483728 | MS.gene073831:CDS |
| TTGTTATTAGGCTGCCGAGA+TGG | 0.605549 | 1.3:+47484723 | None:intergenic |
| TTCAAGTGACGAAGATGGCG+TGG | 0.605966 | 1.3:-47481007 | MS.gene073831:CDS |
| GAATCCAAGAGAAGATCCCC+AGG | 0.606684 | 1.3:-47484780 | MS.gene073831:CDS |
| CAAATGACGGCCGATCGTCT+AGG | 0.607323 | 1.3:-47484641 | MS.gene073831:CDS |
| TCAATCTAGCTATAACACCT+GGG | 0.609545 | 1.3:+47484763 | None:intergenic |
| GAGATCCCAAAGGCAGAGAG+TGG | 0.610060 | 1.3:-47484570 | MS.gene073831:CDS |
| CAGCAGCAAGGATGGTTGGA+GGG | 0.612392 | 1.3:-47483494 | MS.gene073831:CDS |
| CATGTATTAGTAGTTTGTCA+AGG | 0.613209 | 1.3:-47483468 | MS.gene073831:CDS |
| TCAAACACAGAAACACTCAC+AGG | 0.614246 | 1.3:+47480835 | None:intergenic |
| AAGGTAGAGGATGATGTCCT+GGG | 0.615193 | 1.3:-47480604 | MS.gene073831:CDS |
| AGTGTCAGTGCTGACCTACA+AGG | 0.615243 | 1.3:-47482067 | MS.gene073831:intron |
| AGCAGAGGAATGGCAAATGA+CGG | 0.617625 | 1.3:-47484654 | MS.gene073831:CDS |
| CTAGCATAGGTCCCTCCACA+TGG | 0.618293 | 1.3:+47481031 | None:intergenic |
| TCGTCACTTGAAACTAGCAT+AGG | 0.622726 | 1.3:+47481018 | None:intergenic |
| TTGAGCTCCTCCTAGACGAT+CGG | 0.626010 | 1.3:+47484631 | None:intergenic |
| AAATTGCAAAGGAAGTAACT+AGG | 0.628658 | 1.3:-47483930 | MS.gene073831:CDS |
| TGACAATTCCTGAATTGATG+CGG | 0.632177 | 1.3:+47480746 | None:intergenic |
| CCTGATTCTAGTTTCTCCGG+TGG | 0.633485 | 1.3:-47485101 | MS.gene073831:CDS |
| GGAATCTAGAGAAATTGCAA+AGG | 0.633666 | 1.3:-47483941 | MS.gene073831:CDS |
| TGAGGCGTTGGACTCTAACA+AGG | 0.635888 | 1.3:-47484418 | MS.gene073831:CDS |
| TTTCATCAGAAGCATCGCGA+TGG | 0.636867 | 1.3:-47484216 | MS.gene073831:CDS |
| AAATCTTCTAAACAATCGGG+TGG | 0.637998 | 1.3:-47484849 | MS.gene073831:CDS |
| GATGCTAGGGAACCAAGGAA+AGG | 0.644912 | 1.3:-47480623 | MS.gene073831:CDS |
| ACACGTGTGAGGAAGGTGAG+AGG | 0.646257 | 1.3:-47486322 | MS.gene073831:CDS |
| GGAATCTGAAGACCATGTGG+AGG | 0.646710 | 1.3:-47481043 | MS.gene073831:CDS |
| AGTGGTTCAACCAACTCAGA+AGG | 0.647689 | 1.3:+47483523 | None:intergenic |
| ATGACGGCCGATCGTCTAGG+AGG | 0.649553 | 1.3:-47484638 | MS.gene073831:CDS |
| ATCGTCTAGGAGGAGCTCAA+GGG | 0.651662 | 1.3:-47484628 | MS.gene073831:CDS |
| ACCACTGGGTATCAGCAGCA+AGG | 0.651868 | 1.3:-47483506 | MS.gene073831:CDS |
| TGTGAGGAAGGTGAGAGGCA+AGG | 0.653222 | 1.3:-47486317 | MS.gene073831:CDS |
| GATGGCACACAAGTCTCAAG+AGG | 0.654613 | 1.3:-47483677 | MS.gene073831:CDS |
| CACAAGTCTCAAGAGGTGCA+AGG | 0.655382 | 1.3:-47483670 | MS.gene073831:CDS |
| CAGAGAAGAGATTATCAGAG+AGG | 0.655836 | 1.3:-47483705 | MS.gene073831:CDS |
| TCCTTGCTGCTGATACCCAG+TGG | 0.657434 | 1.3:+47483505 | None:intergenic |
| GTATCCTTTAAATATAGGAG+AGG | 0.659890 | 1.3:+47483867 | None:intergenic |
| TTCTGGGAATGAATCTCCAG+AGG | 0.661179 | 1.3:-47483818 | MS.gene073831:CDS |
| CAAACACAGAAACACTCACA+GGG | 0.661315 | 1.3:+47480836 | None:intergenic |
| GAATCTGAAGACCATGTGGA+GGG | 0.661775 | 1.3:-47481042 | MS.gene073831:CDS |
| ACCGGAATGTGATTGGAAAG+GGG | 0.664557 | 1.3:+47484326 | None:intergenic |
| GTCAGATAGGGAGTCAACAG+GGG | 0.667063 | 1.3:-47484253 | MS.gene073831:CDS |
| CCAAGGCAGTGACACGTGTG+AGG | 0.671197 | 1.3:-47486333 | MS.gene073831:CDS |
| AAGAGTCTTGATCATAGACA+TGG | 0.675010 | 1.3:-47483319 | MS.gene073831:CDS |
| ACTTAAATAGACATAGCAGA+CGG | 0.675436 | 1.3:-47483765 | MS.gene073831:CDS |
| CAATCTAGCTATAACACCTG+GGG | 0.676866 | 1.3:+47484764 | None:intergenic |
| CAGGTACAGGTGCTTCAGAG+AGG | 0.687176 | 1.3:+47482194 | None:intergenic |
| TTATCCGAAGAAGATTCAGA+AGG | 0.687645 | 1.3:+47483058 | None:intergenic |
| TGCTGATTGAGGAGTCTCGG+TGG | 0.702994 | 1.3:-47480576 | MS.gene073831:CDS |
| GTTGGAATCTGAAGACCATG+TGG | 0.720815 | 1.3:-47481046 | MS.gene073831:CDS |
| AATATGGGAAAATTTCAGAG+TGG | 0.723259 | 1.3:-47484117 | MS.gene073831:CDS |
| TGTTCTGGCAGAAAATTATG+CGG | 0.723663 | 1.3:+47484066 | None:intergenic |
| AGAGTTCCATGATACACTTG+AGG | 0.730462 | 1.3:-47484436 | MS.gene073831:CDS |
| TGAGGTCTCAGAGATCCCAA+AGG | 0.731349 | 1.3:-47484580 | MS.gene073831:CDS |
| ACAGATGATTCACTAGAACG+CGG | 0.780245 | 1.3:+47483739 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGAAATGTATAAATAA+GGG | + | chr1.3:47484174-47484193 | None:intergenic | 10.0% |
| !! | TAAAAATAACAAAAATAACA+CGG | + | chr1.3:47481882-47481901 | None:intergenic | 10.0% |
| !! | TATTAAGAAATGTATAAATA+AGG | + | chr1.3:47484175-47484194 | None:intergenic | 10.0% |
| !!! | AAATTTTATGAGAAATTATT+TGG | + | chr1.3:47484022-47484041 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTGATTTCATTA+AGG | - | chr1.3:47481249-47481268 | MS.gene073831:intron | 10.0% |
| !! | AAAAAAAGCAGAAAAAAATT+TGG | + | chr1.3:47481380-47481399 | None:intergenic | 15.0% |
| !! | AAAAAATAATCAAAATCTCA+AGG | + | chr1.3:47484305-47484324 | None:intergenic | 15.0% |
| !! | AAATATTAATAGCAACAAAA+TGG | + | chr1.3:47484394-47484413 | None:intergenic | 15.0% |
| !! | AATATTAATAGCAACAAAAT+GGG | + | chr1.3:47484393-47484412 | None:intergenic | 15.0% |
| !! | ATAAACATATCAAAATAACA+TGG | + | chr1.3:47483886-47483905 | None:intergenic | 15.0% |
| !! | ATGGTTAAATAATAAATTTG+TGG | + | chr1.3:47485205-47485224 | None:intergenic | 15.0% |
| !! | AAAATGTATGATTAAGTCTA+AGG | + | chr1.3:47484441-47484460 | None:intergenic | 20.0% |
| !! | AATATTTCAAAGTTCTGTTA+AGG | - | chr1.3:47484534-47484553 | MS.gene073831:CDS | 20.0% |
| !! | ATATTTCAAAGTTCTGTTAA+GGG | - | chr1.3:47484535-47484554 | MS.gene073831:CDS | 20.0% |
| !! | ATGTAAAGTTTCAAAAACAT+TGG | - | chr1.3:47484332-47484351 | MS.gene073831:CDS | 20.0% |
| !! | CAATTATGAATCCAAATATA+AGG | + | chr1.3:47484844-47484863 | None:intergenic | 20.0% |
| !! | GAAAAAGAAAAAGAAAATGT+AGG | + | chr1.3:47480792-47480811 | None:intergenic | 20.0% |
| !! | GTAATATTAAACCCTATTTA+TGG | - | chr1.3:47484946-47484965 | MS.gene073831:intron | 20.0% |
| !! | TAAAATTACTTCAATTTGCA+TGG | - | chr1.3:47485090-47485109 | MS.gene073831:CDS | 20.0% |
| !! | TGAGAAATTATTTGGTTAAT+TGG | + | chr1.3:47484014-47484033 | None:intergenic | 20.0% |
| !! | TGATATTGTTGTAATATTTC+AGG | - | chr1.3:47484575-47484594 | MS.gene073831:CDS | 20.0% |
| !! | TTATTATTTAACCATAGCAA+GGG | - | chr1.3:47485210-47485229 | MS.gene073831:intron | 20.0% |
| !! | TTTATTATTTAACCATAGCA+AGG | - | chr1.3:47485209-47485228 | MS.gene073831:intron | 20.0% |
| !! | TTTGGATCAAAAATGATTAA+CGG | - | chr1.3:47486159-47486178 | MS.gene073831:intron | 20.0% |
| !!! | ATAGCTAGAATTTAGAATAA+GGG | - | chr1.3:47481815-47481834 | MS.gene073831:intron | 20.0% |
| !!! | ATTTTGAACTTCATTTAAGT+CGG | + | chr1.3:47483616-47483635 | None:intergenic | 20.0% |
| !!! | TATAGCTAGAATTTAGAATA+AGG | - | chr1.3:47481814-47481833 | MS.gene073831:intron | 20.0% |
| !!! | TATTGAATGAATCTAAAACA+TGG | + | chr1.3:47485355-47485374 | None:intergenic | 20.0% |
| !!! | TGTTGTTTAATTCATTTTCA+GGG | - | chr1.3:47481660-47481679 | MS.gene073831:intron | 20.0% |
| !!! | TTAATCATTTTTGATCCAAA+AGG | + | chr1.3:47486159-47486178 | None:intergenic | 20.0% |
| !!! | TTGTTGTTTAATTCATTTTC+AGG | - | chr1.3:47481659-47481678 | MS.gene073831:intron | 20.0% |
| !!! | TTTTATTATTGTCAAGAATG+TGG | + | chr1.3:47485075-47485094 | None:intergenic | 20.0% |
| ! | AAATTACTAGAATCAATGCA+AGG | + | chr1.3:47481571-47481590 | None:intergenic | 25.0% |
| ! | AACCTTTAACCTTCATATAT+AGG | + | chr1.3:47484976-47484995 | None:intergenic | 25.0% |
| ! | AATAACAGTTCATTACAACA+AGG | + | chr1.3:47485724-47485743 | None:intergenic | 25.0% |
| ! | AATGAACTGTTATTGTTGAT+AGG | - | chr1.3:47485730-47485749 | MS.gene073831:intron | 25.0% |
| ! | AGAATTTAAGGATGTATTTG+AGG | - | chr1.3:47482228-47482247 | MS.gene073831:CDS | 25.0% |
| ! | AGAGATGATTAAGTAACTAA+AGG | + | chr1.3:47484870-47484889 | None:intergenic | 25.0% |
| ! | ATATAGGATGTCCATAAATA+GGG | + | chr1.3:47484960-47484979 | None:intergenic | 25.0% |
| ! | ATATTGGACATCGAAATTAT+AGG | + | chr1.3:47480866-47480885 | None:intergenic | 25.0% |
| ! | ATCCTATATATGAAGGTTAA+AGG | - | chr1.3:47484971-47484990 | MS.gene073831:intron | 25.0% |
| ! | ATGAACTGTTATTGTTGATA+GGG | - | chr1.3:47485731-47485750 | MS.gene073831:intron | 25.0% |
| ! | CAGATAAAAGAACTAAGAAT+AGG | + | chr1.3:47484264-47484283 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1.3:47485366-47485385 | MS.gene073831:intron | 25.0% |
| ! | CTATGTCTATTTAAGTCAAA+CGG | + | chr1.3:47483057-47483076 | None:intergenic | 25.0% |
| ! | CTGATAATAATTTGGAAGTT+TGG | - | chr1.3:47485953-47485972 | MS.gene073831:intron | 25.0% |
| ! | TATATAGGATGTCCATAAAT+AGG | + | chr1.3:47484961-47484980 | None:intergenic | 25.0% |
| ! | TATCAAATGAAAACACTGTT+GGG | - | chr1.3:47483745-47483764 | MS.gene073831:CDS | 25.0% |
| ! | TATTGGACATCGAAATTATA+GGG | + | chr1.3:47480865-47480884 | None:intergenic | 25.0% |
| ! | TCAGCTAATAACTTCTTAAT+TGG | + | chr1.3:47482007-47482026 | None:intergenic | 25.0% |
| ! | TGCAGTTCTCATTTAAATTT+GGG | - | chr1.3:47481951-47481970 | MS.gene073831:intron | 25.0% |
| ! | TGCTCAAACTGATAATAATT+TGG | - | chr1.3:47485945-47485964 | MS.gene073831:intron | 25.0% |
| ! | TGTTAGAAGGAAATACATTA+TGG | - | chr1.3:47485857-47485876 | MS.gene073831:intron | 25.0% |
| ! | TTCATAACCAAAAGTGAAAA+AGG | + | chr1.3:47481787-47481806 | None:intergenic | 25.0% |
| ! | TTGAACATGATTTCAATTTG+AGG | - | chr1.3:47482551-47482570 | MS.gene073831:intron | 25.0% |
| ! | TTGCAGTTCTCATTTAAATT+TGG | - | chr1.3:47481950-47481969 | MS.gene073831:intron | 25.0% |
| ! | TTGGATCAAAAATGATTAAC+GGG | - | chr1.3:47486160-47486179 | MS.gene073831:intron | 25.0% |
| !! | AAACAACACTTTTATCTCTA+AGG | + | chr1.3:47483707-47483726 | None:intergenic | 25.0% |
| !! | AACAACACTTTTATCTCTAA+GGG | + | chr1.3:47483706-47483725 | None:intergenic | 25.0% |
| !! | ATTGATAGTAGATGATTTAG+TGG | - | chr1.3:47486320-47486339 | MS.gene073831:CDS | 25.0% |
| !! | ATTTTCCCATATTAGGTTTT+AGG | + | chr1.3:47482702-47482721 | None:intergenic | 25.0% |
| !! | ATTTTGCACAATTGTTTAGA+TGG | - | chr1.3:47484410-47484429 | MS.gene073831:CDS | 25.0% |
| !! | CTAGAGTATCCTTTAAATAT+AGG | + | chr1.3:47482967-47482986 | None:intergenic | 25.0% |
| !! | TCAAACCTTTCATCAATTTT+TGG | - | chr1.3:47485598-47485617 | MS.gene073831:intron | 25.0% |
| !! | TTTTGAACTTCATTTAAGTC+GGG | + | chr1.3:47483615-47483634 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr1.3:47485440-47485459 | MS.gene073831:intron | 25.0% |
| !!! | ACAGTTTTTTGATCATAAGA+CGG | - | chr1.3:47484997-47485016 | MS.gene073831:intron | 25.0% |
| !!! | AGATTGATGACGTAATTATT+AGG | + | chr1.3:47485274-47485293 | None:intergenic | 25.0% |
| !!! | GTTTTTTCCTTTTTCACTTT+TGG | - | chr1.3:47481777-47481796 | MS.gene073831:intron | 25.0% |
| !!! | TGCTTTTTTTAACTTTTCTG+CGG | - | chr1.3:47481390-47481409 | MS.gene073831:intron | 25.0% |
| AAAATTCAATGCAAGAGGTT+AGG | - | chr1.3:47483853-47483872 | MS.gene073831:CDS | 30.0% | |
| AAATTGCAAAGGAAGTAACT+AGG | - | chr1.3:47482896-47482915 | MS.gene073831:intron | 30.0% | |
| AAATTGCCAAATCTATGATC+TGG | - | chr1.3:47484092-47484111 | MS.gene073831:CDS | 30.0% | |
| AAGCTCCAAAAATTGATGAA+AGG | + | chr1.3:47485606-47485625 | None:intergenic | 30.0% | |
| AATATGGGAAAATTTCAGAG+TGG | - | chr1.3:47482709-47482728 | MS.gene073831:intron | 30.0% | |
| ACTTAAATAGACATAGCAGA+CGG | - | chr1.3:47483061-47483080 | MS.gene073831:CDS | 30.0% | |
| ACTTCGTAATGATCGATATA+TGG | - | chr1.3:47483446-47483465 | MS.gene073831:CDS | 30.0% | |
| AGAGATGACATTGATGTAAT+AGG | - | chr1.3:47486282-47486301 | MS.gene073831:CDS | 30.0% | |
| AGATAGAGTAGAAACTAGAA+AGG | + | chr1.3:47480750-47480769 | None:intergenic | 30.0% | |
| AGTTCTCATTTAAATTTGGG+TGG | - | chr1.3:47481954-47481973 | MS.gene073831:intron | 30.0% | |
| ATGAAAAACAATCTGAGCAA+TGG | - | chr1.3:47482922-47482941 | MS.gene073831:intron | 30.0% | |
| ATGAATCCAAATATAAGGTG+AGG | + | chr1.3:47484839-47484858 | None:intergenic | 30.0% | |
| ATGGTATGTAATGTAGAAAG+TGG | - | chr1.3:47485118-47485137 | MS.gene073831:CDS | 30.0% | |
| ATGTTCAAAGTTCTCCATAT+TGG | + | chr1.3:47482539-47482558 | None:intergenic | 30.0% | |
| ATTCATTGAACAGAAGTTCA+TGG | - | chr1.3:47482324-47482343 | MS.gene073831:intron | 30.0% | |
| CAACAAGGAAACCAAAAAAA+AGG | + | chr1.3:47485709-47485728 | None:intergenic | 30.0% | |
| GAAATTATAGGGAAAAAGTG+TGG | + | chr1.3:47480854-47480873 | None:intergenic | 30.0% | |
| GATAGAGTAGAAACTAGAAA+GGG | + | chr1.3:47480749-47480768 | None:intergenic | 30.0% | |
| GTATCAAATGAAAACACTGT+TGG | - | chr1.3:47483744-47483763 | MS.gene073831:CDS | 30.0% | |
| GTATCCTTTAAATATAGGAG+AGG | + | chr1.3:47482962-47482981 | None:intergenic | 30.0% | |
| GTATTCATCTTCAGATTTGA+AGG | - | chr1.3:47482282-47482301 | MS.gene073831:intron | 30.0% | |
| GTGGAAATCTTCTAAACAAT+CGG | - | chr1.3:47481973-47481992 | MS.gene073831:intron | 30.0% | |
| GTGTTGAACTCAATATCTAA+TGG | - | chr1.3:47484114-47484133 | MS.gene073831:CDS | 30.0% | |
| GTTGTCCTAAAACCTAATAT+GGG | - | chr1.3:47482694-47482713 | MS.gene073831:intron | 30.0% | |
| TATGGACATCCTATATATGA+AGG | - | chr1.3:47484964-47484983 | MS.gene073831:intron | 30.0% | |
| TCTTCCTCTCCTATATTTAA+AGG | - | chr1.3:47482955-47482974 | MS.gene073831:intron | 30.0% | |
| TGGAAATCTTCTAAACAATC+GGG | - | chr1.3:47481974-47481993 | MS.gene073831:intron | 30.0% | |
| TGTATATACTAAGACCTCAA+AGG | + | chr1.3:47485304-47485323 | None:intergenic | 30.0% | |
| TGTTGTCCTAAAACCTAATA+TGG | - | chr1.3:47482693-47482712 | MS.gene073831:intron | 30.0% | |
| TGTTTCGTTTAACAGTTGAT+TGG | - | chr1.3:47485642-47485661 | MS.gene073831:intron | 30.0% | |
| TTCTCAACGATCAATTATTC+TGG | - | chr1.3:47484489-47484508 | MS.gene073831:CDS | 30.0% | |
| TTCTGCTAAAATACTTCAAG+CGG | - | chr1.3:47482434-47482453 | MS.gene073831:intron | 30.0% | |
| ! | AATTCTAGAAGCACAATATC+TGG | - | chr1.3:47483534-47483553 | MS.gene073831:CDS | 30.0% |
| ! | ACAACACTTTTATCTCTAAG+GGG | + | chr1.3:47483705-47483724 | None:intergenic | 30.0% |
| ! | ACATTTTGTGAAGTTATCAG+AGG | - | chr1.3:47484454-47484473 | MS.gene073831:CDS | 30.0% |
| ! | ATTTCAATTTGAGGTCAGAT+AGG | - | chr1.3:47482560-47482579 | MS.gene073831:intron | 30.0% |
| ! | CATGTATTAGTAGTTTGTCA+AGG | - | chr1.3:47483358-47483377 | MS.gene073831:CDS | 30.0% |
| ! | CATTTTTGATCCAAAAGGTT+TGG | + | chr1.3:47486154-47486173 | None:intergenic | 30.0% |
| ! | CTTTTATCTGATCATCATAC+AGG | - | chr1.3:47484274-47484293 | MS.gene073831:CDS | 30.0% |
| ! | TAATTGGCTTATGTGATATG+AGG | + | chr1.3:47483998-47484017 | None:intergenic | 30.0% |
| ! | TTTCAATTTGAGGTCAGATA+GGG | - | chr1.3:47482561-47482580 | MS.gene073831:intron | 30.0% |
| !! | GTATCTTCTGAAATGTTAGA+AGG | - | chr1.3:47485844-47485863 | MS.gene073831:intron | 30.0% |
| !! | GTGAGATTTAATTTTGTCCA+TGG | + | chr1.3:47480986-47481005 | None:intergenic | 30.0% |
| !! | TCATCTTGTTCTGAATGTTT+TGG | - | chr1.3:47484735-47484754 | MS.gene073831:CDS | 30.0% |
| !! | TGCTTTTTAAACAAAGAGTC+TGG | + | chr1.3:47482460-47482479 | None:intergenic | 30.0% |
| !!! | CTCTGAAATTTTCCCATATT+AGG | + | chr1.3:47482709-47482728 | None:intergenic | 30.0% |
| !!! | TGATGTTTGTGCCTTTTTTT+TGG | - | chr1.3:47485695-47485714 | MS.gene073831:intron | 30.0% |
| !!! | TTTTTTTAACTTTTCTGCGG+TGG | - | chr1.3:47481393-47481412 | MS.gene073831:intron | 30.0% |
| AAATCTTCTAAACAATCGGG+TGG | - | chr1.3:47481977-47481996 | MS.gene073831:intron | 35.0% | |
| AAGAATGTGGCAAGCTAAAA+AGG | + | chr1.3:47485062-47485081 | None:intergenic | 35.0% | |
| AAGAGTCTTGATCATAGACA+TGG | - | chr1.3:47483507-47483526 | MS.gene073831:CDS | 35.0% | |
| AAGCAGACAAAAGACAAGAA+AGG | + | chr1.3:47484226-47484245 | None:intergenic | 35.0% | |
| AAGGGATCAGGAAGAATTTA+AGG | - | chr1.3:47482216-47482235 | MS.gene073831:CDS | 35.0% | |
| ACAACAATCTTTGACGATCT+TGG | + | chr1.3:47482679-47482698 | None:intergenic | 35.0% | |
| ACCTATTGATGTCTATGGTA+TGG | + | chr1.3:47484915-47484934 | None:intergenic | 35.0% | |
| AGAAAATTATGCGGAGAACA+AGG | + | chr1.3:47482754-47482773 | None:intergenic | 35.0% | |
| AGAGGAAATAACAGCAACTT+TGG | - | chr1.3:47483026-47483045 | MS.gene073831:CDS | 35.0% | |
| AGCAACAAATTCATTTGTGC+TGG | + | chr1.3:47485555-47485574 | None:intergenic | 35.0% | |
| ATCAATCTAGCTATAACACC+TGG | + | chr1.3:47482067-47482086 | None:intergenic | 35.0% | |
| CATTAATGGAGAGACGTTAT+TGG | + | chr1.3:47480683-47480702 | None:intergenic | 35.0% | |
| CGAAGAAAATTCAATGCAAG+AGG | - | chr1.3:47483848-47483867 | MS.gene073831:CDS | 35.0% | |
| GAAAATCTTGATATGTCGCT+AGG | + | chr1.3:47482360-47482379 | None:intergenic | 35.0% | |
| GACAGATCATCTGTAAAAGA+AGG | + | chr1.3:47484717-47484736 | None:intergenic | 35.0% | |
| GAGGAAATAACAGCAACTTT+GGG | - | chr1.3:47483027-47483046 | MS.gene073831:CDS | 35.0% | |
| GGAAATTATGAGAAAACACG+TGG | + | chr1.3:47484894-47484913 | None:intergenic | 35.0% | |
| GGAATCTAGAGAAATTGCAA+AGG | - | chr1.3:47482885-47482904 | MS.gene073831:intron | 35.0% | |
| GGAGAATAGTGAGGTAATAT+TGG | + | chr1.3:47480882-47480901 | None:intergenic | 35.0% | |
| GTGATTTGACTACTTGTTCA+AGG | - | chr1.3:47486034-47486053 | MS.gene073831:intron | 35.0% | |
| TAGTCACCTATTGATGTCTA+TGG | + | chr1.3:47484920-47484939 | None:intergenic | 35.0% | |
| TCAAAGTTCTCCATATTGGT+TGG | + | chr1.3:47482535-47482554 | None:intergenic | 35.0% | |
| TCAACACCAGATCATAGATT+TGG | + | chr1.3:47484101-47484120 | None:intergenic | 35.0% | |
| TCAATCTAGCTATAACACCT+GGG | + | chr1.3:47482066-47482085 | None:intergenic | 35.0% | |
| TCAATCTCTTAATGCCTTTG+AGG | - | chr1.3:47485287-47485306 | MS.gene073831:intron | 35.0% | |
| TCATAAACAGCAACAACATC+CGG | - | chr1.3:47481694-47481713 | MS.gene073831:intron | 35.0% | |
| TCATCTTCAGATTTGAAGGA+CGG | - | chr1.3:47482286-47482305 | MS.gene073831:intron | 35.0% | |
| TCATGTAGAACCAACCAATA+TGG | - | chr1.3:47482522-47482541 | MS.gene073831:intron | 35.0% | |
| TCCATACCATAGACATCAAT+AGG | - | chr1.3:47484911-47484930 | MS.gene073831:intron | 35.0% | |
| TGACAATTCCTGAATTGATG+CGG | + | chr1.3:47486083-47486102 | None:intergenic | 35.0% | |
| TGCTTATATTTGTGACCAGA+GGG | + | chr1.3:47485327-47485346 | None:intergenic | 35.0% | |
| TGTAGACCTCACCTTATATT+TGG | - | chr1.3:47484830-47484849 | MS.gene073831:CDS | 35.0% | |
| TGTTCTGGCAGAAAATTATG+CGG | + | chr1.3:47482763-47482782 | None:intergenic | 35.0% | |
| TGTTTGAAGATCTGGAAGAT+AGG | - | chr1.3:47486007-47486026 | MS.gene073831:intron | 35.0% | |
| TTAGAGAAAAATCGAAGCAG+AGG | - | chr1.3:47482157-47482176 | MS.gene073831:CDS | 35.0% | |
| TTATCCGAAGAAGATTCAGA+AGG | + | chr1.3:47483771-47483790 | None:intergenic | 35.0% | |
| TTCAATTTGCATGGTAGTCA+TGG | - | chr1.3:47485099-47485118 | MS.gene073831:CDS | 35.0% | |
| TTCTGAATCTTCTTCGGATA+AGG | - | chr1.3:47483770-47483789 | MS.gene073831:CDS | 35.0% | |
| TTGAGAATTGAAGCTGAAAC+TGG | + | chr1.3:47481082-47481101 | None:intergenic | 35.0% | |
| TTGCTTATATTTGTGACCAG+AGG | + | chr1.3:47485328-47485347 | None:intergenic | 35.0% | |
| TTGTTAAGATATACACCCTC+CGG | + | chr1.3:47485462-47485481 | None:intergenic | 35.0% | |
| TTTGGCAATTTCATAGCTAG+AGG | + | chr1.3:47484083-47484102 | None:intergenic | 35.0% | |
| ! | AATGATAAGTTTGCTCGCAA+CGG | - | chr1.3:47483276-47483295 | MS.gene073831:CDS | 35.0% |
| ! | AGGTGTTATAGCTAGATTGA+TGG | - | chr1.3:47482066-47482085 | MS.gene073831:intron | 35.0% |
| ! | CATAATTTTCTGCCAGAACA+TGG | - | chr1.3:47482763-47482782 | MS.gene073831:intron | 35.0% |
| ! | CTGCTTCGATTTTTCTCTAA+AGG | + | chr1.3:47482157-47482176 | None:intergenic | 35.0% |
| ! | GGTGTTATAGCTAGATTGAT+GGG | - | chr1.3:47482067-47482086 | MS.gene073831:intron | 35.0% |
| ! | GTCTTTTAGGCACAATTCTT+TGG | - | chr1.3:47482864-47482883 | MS.gene073831:intron | 35.0% |
| ! | TGTTTCTGTGTTTGAAGATC+TGG | - | chr1.3:47485999-47486018 | MS.gene073831:intron | 35.0% |
| !! | AAAGTTGCTGTTATTTCCTC+TGG | + | chr1.3:47483027-47483046 | None:intergenic | 35.0% |
| !! | AGTAGTGGGTAAGAATAATG+TGG | + | chr1.3:47480715-47480734 | None:intergenic | 35.0% |
| !! | ATTTAATTTTGTCCATGGCG+AGG | + | chr1.3:47480981-47481000 | None:intergenic | 35.0% |
| ACAGATGATTCACTAGAACG+CGG | + | chr1.3:47483090-47483109 | None:intergenic | 40.0% | |
| AGAAGAAAAACCCTAAGAGG+AGG | + | chr1.3:47480912-47480931 | None:intergenic | 40.0% | |
| AGAAGAGATTATCAGAGAGG+TGG | - | chr1.3:47483124-47483143 | MS.gene073831:CDS | 40.0% | |
| AGAAGATTCACCCAATCTTG+AGG | - | chr1.3:47483656-47483675 | MS.gene073831:CDS | 40.0% | |
| AGAGACGTTATTGGAAGAGT+GGG | + | chr1.3:47480674-47480693 | None:intergenic | 40.0% | |
| AGAGTTCCATGATACACTTG+AGG | - | chr1.3:47482390-47482409 | MS.gene073831:intron | 40.0% | |
| ATAGTTCAAGCAGTGCTTCT+GGG | - | chr1.3:47482992-47483011 | MS.gene073831:CDS | 40.0% | |
| ATATTTCAGGACGTATCAGC+TGG | - | chr1.3:47484588-47484607 | MS.gene073831:CDS | 40.0% | |
| ATCAAGAACAGAGATTGGAC+TGG | + | chr1.3:47484694-47484713 | None:intergenic | 40.0% | |
| ATGGAGAACTGAAGATAGCT+GGG | - | chr1.3:47485876-47485895 | MS.gene073831:intron | 40.0% | |
| ATTATCAGAGAGGTGGAAGA+TGG | - | chr1.3:47483131-47483150 | MS.gene073831:CDS | 40.0% | |
| CAAACACAGAAACACTCACA+GGG | + | chr1.3:47485993-47486012 | None:intergenic | 40.0% | |
| CAAGGTTGCAGAGAAAGATT+CGG | - | chr1.3:47481748-47481767 | MS.gene073831:intron | 40.0% | |
| CAATCTAGCTATAACACCTG+GGG | + | chr1.3:47482065-47482084 | None:intergenic | 40.0% | |
| CAGAGAAGAGATTATCAGAG+AGG | - | chr1.3:47483121-47483140 | MS.gene073831:CDS | 40.0% | |
| CTACTTGTTCAAGGTCTGAA+AGG | - | chr1.3:47486043-47486062 | MS.gene073831:intron | 40.0% | |
| CTAGAATCAGGAGAGAAATC+CGG | + | chr1.3:47481716-47481735 | None:intergenic | 40.0% | |
| GAAAAATCGAAGCAGAGGAA+TGG | - | chr1.3:47482162-47482181 | MS.gene073831:CDS | 40.0% | |
| GAAGGATCAAGAACAGAGAT+TGG | + | chr1.3:47484699-47484718 | None:intergenic | 40.0% | |
| GAGAGAAGAAAAACCCTAAG+AGG | + | chr1.3:47480915-47480934 | None:intergenic | 40.0% | |
| GGGTGAATCTTCTTCAAGAT+TGG | + | chr1.3:47483649-47483668 | None:intergenic | 40.0% | |
| GTCTTAGTATATACACCCTC+TGG | - | chr1.3:47485309-47485328 | MS.gene073831:intron | 40.0% | |
| TAAATTTGCCTGACAGTGCA+AGG | - | chr1.3:47482842-47482861 | MS.gene073831:intron | 40.0% | |
| TAAGGTTCTTCCTGGATCAT+CGG | - | chr1.3:47483788-47483807 | MS.gene073831:CDS | 40.0% | |
| TACCCTTCATTCTCTTACCA+GGG | + | chr1.3:47483221-47483240 | None:intergenic | 40.0% | |
| TATCTGGTCACAAGAAGTCT+TGG | - | chr1.3:47483550-47483569 | MS.gene073831:CDS | 40.0% | |
| TATGGAGAACTGAAGATAGC+TGG | - | chr1.3:47485875-47485894 | MS.gene073831:intron | 40.0% | |
| TCAAACACAGAAACACTCAC+AGG | + | chr1.3:47485994-47486013 | None:intergenic | 40.0% | |
| TCAAGAACAGAGATTGGACT+GGG | + | chr1.3:47484693-47484712 | None:intergenic | 40.0% | |
| TCAGCATGATTTCCATGTTC+TGG | + | chr1.3:47482778-47482797 | None:intergenic | 40.0% | |
| TCGTCACTTGAAACTAGCAT+AGG | + | chr1.3:47485811-47485830 | None:intergenic | 40.0% | |
| TGAATCATCTGTGAGTAGAG+AGG | - | chr1.3:47483098-47483117 | MS.gene073831:CDS | 40.0% | |
| TGATCAGCATCTTTACAGCA+TGG | + | chr1.3:47484669-47484688 | None:intergenic | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr1.3:47485444-47485463 | MS.gene073831:intron | 40.0% | |
| TTCCCTGGTAAGAGAATGAA+GGG | - | chr1.3:47483216-47483235 | MS.gene073831:CDS | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr1.3:47485443-47485462 | MS.gene073831:intron | 40.0% | |
| ! | AAAGGTGCATGTCAGCATTT+GGG | - | chr1.3:47480581-47480600 | MS.gene073831:CDS | 40.0% |
| ! | AGAAATGCAGCCAAACCTTT+TGG | - | chr1.3:47486141-47486160 | MS.gene073831:intron | 40.0% |
| ! | ATAGCAAGGGTGTGTTTCAT+GGG | - | chr1.3:47485223-47485242 | MS.gene073831:intron | 40.0% |
| ! | ATGGTCTTTTCCAGATGCTA+GGG | - | chr1.3:47486190-47486209 | MS.gene073831:intron | 40.0% |
| ! | CTAGTTTCAAGTGACGAAGA+TGG | - | chr1.3:47485814-47485833 | MS.gene073831:intron | 40.0% |
| ! | GAAAGGTTTGAAGCAGAAGA+TGG | + | chr1.3:47485589-47485608 | None:intergenic | 40.0% |
| ! | TAACTTTTCTGCGGTGGTAT+CGG | - | chr1.3:47481399-47481418 | MS.gene073831:intron | 40.0% |
| ! | TGATCGATATATGGTGCCAA+AGG | - | chr1.3:47483455-47483474 | MS.gene073831:CDS | 40.0% |
| ! | TTTATCTCTAAGGGGCTCAA+AGG | + | chr1.3:47483697-47483716 | None:intergenic | 40.0% |
| !! | ATGATTAACGGGCTTCAAGA+TGG | - | chr1.3:47486171-47486190 | MS.gene073831:intron | 40.0% |
| !! | ATTGGTTGGTTCTACATGAC+CGG | + | chr1.3:47482521-47482540 | None:intergenic | 40.0% |
| !! | TCCTTGTGCTGCTTGTTATT+AGG | + | chr1.3:47482118-47482137 | None:intergenic | 40.0% |
| !! | TCTCCTGATTCTAGTTTCTC+CGG | - | chr1.3:47481722-47481741 | MS.gene073831:intron | 40.0% |
| !! | TGTGGAGAGAGAAGCATTAA+TGG | + | chr1.3:47480697-47480716 | None:intergenic | 40.0% |
| AAAGGTAGAGGATGATGTCC+TGG | - | chr1.3:47486221-47486240 | MS.gene073831:intron | 45.0% | |
| AAGGTAGAGGATGATGTCCT+GGG | - | chr1.3:47486222-47486241 | MS.gene073831:intron | 45.0% | |
| AATGCTGACATGCACCTTTC+TGG | + | chr1.3:47480580-47480599 | None:intergenic | 45.0% | |
| ACCCCTTTCCAATCACATTC+CGG | - | chr1.3:47482499-47482518 | MS.gene073831:intron | 45.0% | |
| ACCGGAATGTGATTGGAAAG+GGG | + | chr1.3:47482503-47482522 | None:intergenic | 45.0% | |
| ACCTTGAGGAAGATGAAGCT+TGG | + | chr1.3:47481019-47481038 | None:intergenic | 45.0% | |
| AGAAAAACCCTAAGAGGAGG+AGG | + | chr1.3:47480909-47480928 | None:intergenic | 45.0% | |
| AGAAATGACGCAGATCGAGA+AGG | + | chr1.3:47480943-47480962 | None:intergenic | 45.0% | |
| AGCAGAGGAATGGCAAATGA+CGG | - | chr1.3:47482172-47482191 | MS.gene073831:CDS | 45.0% | |
| AGGGTGTGTAGTAGTAGTAG+TGG | + | chr1.3:47480730-47480749 | None:intergenic | 45.0% | |
| AGTGGTTCAACCAACTCAGA+AGG | + | chr1.3:47483306-47483325 | None:intergenic | 45.0% | |
| ATGCTGACATGCACCTTTCT+GGG | + | chr1.3:47480579-47480598 | None:intergenic | 45.0% | |
| CAACAGGGGTGAATTACAAC+AGG | - | chr1.3:47482587-47482606 | MS.gene073831:intron | 45.0% | |
| CAGATTCCAACTTCAGCAAC+TGG | + | chr1.3:47485771-47485790 | None:intergenic | 45.0% | |
| CATCATCCTCTACCTTTCCT+TGG | + | chr1.3:47486218-47486237 | None:intergenic | 45.0% | |
| CATGAAACACACCCTTGCTA+TGG | + | chr1.3:47485224-47485243 | None:intergenic | 45.0% | |
| CCAAAGACAGTAGATGAAGC+AGG | + | chr1.3:47483396-47483415 | None:intergenic | 45.0% | |
| CCTGCTTCATCTACTGTCTT+TGG | - | chr1.3:47483393-47483412 | MS.gene073831:CDS | 45.0% | |
| CTAAAAGACCTTGCACTGTC+AGG | + | chr1.3:47482853-47482872 | None:intergenic | 45.0% | |
| CTACATGACCGGAATGTGAT+TGG | + | chr1.3:47482510-47482529 | None:intergenic | 45.0% | |
| CTTCTCTTGGATTCAGTTGC+TGG | + | chr1.3:47482040-47482059 | None:intergenic | 45.0% | |
| GAATCTGAAGACCATGTGGA+GGG | - | chr1.3:47485784-47485803 | MS.gene073831:intron | 45.0% | |
| GACCGGAATGTGATTGGAAA+GGG | + | chr1.3:47482504-47482523 | None:intergenic | 45.0% | |
| GAGAGACGTTATTGGAAGAG+TGG | + | chr1.3:47480675-47480694 | None:intergenic | 45.0% | |
| GATAGTTCAAGCAGTGCTTC+TGG | - | chr1.3:47482991-47483010 | MS.gene073831:CDS | 45.0% | |
| GATGAAGCTTGGAGTTGTTG+CGG | + | chr1.3:47481008-47481027 | None:intergenic | 45.0% | |
| GCCTAATAACAAGCAGCACA+AGG | - | chr1.3:47482114-47482133 | MS.gene073831:CDS | 45.0% | |
| GGCAGAAATAGTCGCTATCT+AGG | - | chr1.3:47486341-47486360 | MS.gene073831:CDS | 45.0% | |
| GGGTGTGTAGTAGTAGTAGT+GGG | + | chr1.3:47480729-47480748 | None:intergenic | 45.0% | |
| GTACCCTTCATTCTCTTACC+AGG | + | chr1.3:47483222-47483241 | None:intergenic | 45.0% | |
| GTTCCCTGGTAAGAGAATGA+AGG | - | chr1.3:47483215-47483234 | MS.gene073831:CDS | 45.0% | |
| GTTGGAATCTGAAGACCATG+TGG | - | chr1.3:47485780-47485799 | MS.gene073831:intron | 45.0% | |
| TCAGCACGCAAGAATGTTCT+AGG | + | chr1.3:47483423-47483442 | None:intergenic | 45.0% | |
| TCCAAGCTTCATCTTCCTCA+AGG | - | chr1.3:47481015-47481034 | MS.gene073831:CDS | 45.0% | |
| TCTTCGGATAAGGTTCTTCC+TGG | - | chr1.3:47483780-47483799 | MS.gene073831:CDS | 45.0% | |
| TCTTTCATGATTCCTCGCCA+TGG | - | chr1.3:47480966-47480985 | MS.gene073831:CDS | 45.0% | |
| TGACCGGAATGTGATTGGAA+AGG | + | chr1.3:47482505-47482524 | None:intergenic | 45.0% | |
| TGGGCCTTCTGAATCTTCTT+CGG | - | chr1.3:47483764-47483783 | MS.gene073831:CDS | 45.0% | |
| TTCACCCAATCTTGAGGTTC+AGG | - | chr1.3:47483662-47483681 | MS.gene073831:CDS | 45.0% | |
| TTGATATGTCGCTAGGCGTT+TGG | + | chr1.3:47482353-47482372 | None:intergenic | 45.0% | |
| TTGCGCAAAACGTGTAGTGA+AGG | + | chr1.3:47484199-47484218 | None:intergenic | 45.0% | |
| ! | AAGCATCGCGATGGTTATCA+TGG | - | chr1.3:47482619-47482638 | MS.gene073831:intron | 45.0% |
| ! | AGTTGCTGATTGAGGAGTCT+CGG | - | chr1.3:47486247-47486266 | MS.gene073831:CDS | 45.0% |
| ! | CATAGCAAGGGTGTGTTTCA+TGG | - | chr1.3:47485222-47485241 | MS.gene073831:intron | 45.0% |
| ! | CTGACAGTGCAAGGTCTTTT+AGG | - | chr1.3:47482851-47482870 | MS.gene073831:intron | 45.0% |
| ! | CTTTTCGACCGCATCAATTC+AGG | - | chr1.3:47486072-47486091 | MS.gene073831:intron | 45.0% |
| ! | GAAAAAGTGTGGAGCGTGAT+AGG | + | chr1.3:47480843-47480862 | None:intergenic | 45.0% |
| ! | GAAAGGTGCATGTCAGCATT+TGG | - | chr1.3:47480580-47480599 | MS.gene073831:CDS | 45.0% |
| ! | GATGGTCTTTTCCAGATGCT+AGG | - | chr1.3:47486189-47486208 | MS.gene073831:intron | 45.0% |
| ! | GCTAGATTGATGGGTCTTGA+CGG | - | chr1.3:47482076-47482095 | MS.gene073831:CDS | 45.0% |
| ! | TCGCACGTCTTTTGTCGAAT+TGG | + | chr1.3:47482645-47482664 | None:intergenic | 45.0% |
| ! | TCGGCTCGTGTCTTAGTAAA+AGG | - | chr1.3:47483807-47483826 | MS.gene073831:CDS | 45.0% |
| ! | TGGTGCCAAAGGACCTTAAA+CGG | - | chr1.3:47483466-47483485 | MS.gene073831:CDS | 45.0% |
| ! | TTCTGGGAATGAATCTCCAG+AGG | - | chr1.3:47483008-47483027 | MS.gene073831:CDS | 45.0% |
| ! | TTGTTATTAGGCTGCCGAGA+TGG | + | chr1.3:47482106-47482125 | None:intergenic | 45.0% |
| !! | TCTGAGTTGGTTGAACCACT+GGG | - | chr1.3:47483306-47483325 | MS.gene073831:CDS | 45.0% |
| !! | TTCTGAGTTGGTTGAACCAC+TGG | - | chr1.3:47483305-47483324 | MS.gene073831:CDS | 45.0% |
| !! | TTTCATCAGAAGCATCGCGA+TGG | - | chr1.3:47482610-47482629 | MS.gene073831:intron | 45.0% |
| AAAACCCTAAGAGGAGGAGG+AGG | + | chr1.3:47480906-47480925 | None:intergenic | 50.0% | |
| AACACCTGGGGATCTTCTCT+TGG | + | chr1.3:47482053-47482072 | None:intergenic | 50.0% | |
| AATCTACTGACCCACAGCCA+TGG | - | chr1.3:47486115-47486134 | MS.gene073831:intron | 50.0% | |
| ACATGCACCTTTCTGGGTTG+TGG | + | chr1.3:47480573-47480592 | None:intergenic | 50.0% | |
| ACCTACCACTCTCTGCCTTT+GGG | + | chr1.3:47482264-47482283 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGTGACCTTG+AGG | + | chr1.3:47481033-47481052 | None:intergenic | 50.0% | |
| AGGAGCCTGAACCTCAAGAT+TGG | + | chr1.3:47483670-47483689 | None:intergenic | 50.0% | |
| AGGGAACCAAGGAAAGGTAG+AGG | - | chr1.3:47486209-47486228 | MS.gene073831:intron | 50.0% | |
| AGGTCAGATAGGGAGTCAAC+AGG | - | chr1.3:47482571-47482590 | MS.gene073831:intron | 50.0% | |
| ATCGTCTAGGAGGAGCTCAA+GGG | - | chr1.3:47482198-47482217 | MS.gene073831:CDS | 50.0% | |
| ATCTACTGACCCACAGCCAT+GGG | - | chr1.3:47486116-47486135 | MS.gene073831:intron | 50.0% | |
| CAAAGGACCTTAAACGGGAG+AGG | - | chr1.3:47483472-47483491 | MS.gene073831:CDS | 50.0% | |
| CAGCATGGAGATTCATGTCC+AGG | + | chr1.3:47484654-47484673 | None:intergenic | 50.0% | |
| CATGCACCTTTCTGGGTTGT+GGG | + | chr1.3:47480572-47480591 | None:intergenic | 50.0% | |
| CATTTCTCACCCATGGCTGT+GGG | + | chr1.3:47486128-47486147 | None:intergenic | 50.0% | |
| CCAACGCCTCAAGTGTATCA+TGG | + | chr1.3:47482399-47482418 | None:intergenic | 50.0% | |
| CCACCGGAGAAACTAGAATC+AGG | + | chr1.3:47481728-47481747 | None:intergenic | 50.0% | |
| CCATGATACACTTGAGGCGT+TGG | - | chr1.3:47482396-47482415 | MS.gene073831:intron | 50.0% | |
| CTAAGGGGCTCAAAGGTTTC+AGG | + | chr1.3:47483690-47483709 | None:intergenic | 50.0% | |
| CTCTTCTCCTCTCCCGTTTA+AGG | + | chr1.3:47483482-47483501 | None:intergenic | 50.0% | |
| GAATCCAAGAGAAGATCCCC+AGG | - | chr1.3:47482046-47482065 | MS.gene073831:intron | 50.0% | |
| GATGCTAGGGAACCAAGGAA+AGG | - | chr1.3:47486203-47486222 | MS.gene073831:intron | 50.0% | |
| GATGGCACACAAGTCTCAAG+AGG | - | chr1.3:47483149-47483168 | MS.gene073831:CDS | 50.0% | |
| GCAACTCCAGTTGCTGAAGT+TGG | - | chr1.3:47485762-47485781 | MS.gene073831:intron | 50.0% | |
| GGAATCTGAAGACCATGTGG+AGG | - | chr1.3:47485783-47485802 | MS.gene073831:intron | 50.0% | |
| GGAGATTCATGTCCAGGTAC+AGG | + | chr1.3:47484648-47484667 | None:intergenic | 50.0% | |
| GGAGCCTGAACCTCAAGATT+GGG | + | chr1.3:47483669-47483688 | None:intergenic | 50.0% | |
| GGTCAGATAGGGAGTCAACA+GGG | - | chr1.3:47482572-47482591 | MS.gene073831:intron | 50.0% | |
| GGTGCCAAAGGACCTTAAAC+GGG | - | chr1.3:47483467-47483486 | MS.gene073831:CDS | 50.0% | |
| GTATCAGCAGCAAGGATGGT+TGG | - | chr1.3:47483328-47483347 | MS.gene073831:CDS | 50.0% | |
| GTCAGATAGGGAGTCAACAG+GGG | - | chr1.3:47482573-47482592 | MS.gene073831:intron | 50.0% | |
| GTCTGTGCATTCACTGAAGC+AGG | - | chr1.3:47483572-47483591 | MS.gene073831:CDS | 50.0% | |
| GTCTTGACGGTCTTCCATCT+CGG | - | chr1.3:47482089-47482108 | MS.gene073831:CDS | 50.0% | |
| TACCTACCACTCTCTGCCTT+TGG | + | chr1.3:47482265-47482284 | None:intergenic | 50.0% | |
| TCATTGAAACCTTCCCCGCT+AGG | + | chr1.3:47483261-47483280 | None:intergenic | 50.0% | |
| TGAGAGAGAGAGAGGTGAGA+GGG | + | chr1.3:47480649-47480668 | None:intergenic | 50.0% | |
| TGAGGTCTCAGAGATCCCAA+AGG | - | chr1.3:47482246-47482265 | MS.gene073831:intron | 50.0% | |
| TTCAAGTGACGAAGATGGCG+TGG | - | chr1.3:47485819-47485838 | MS.gene073831:intron | 50.0% | |
| TTCCAGATGCTAGGGAACCA+AGG | - | chr1.3:47486198-47486217 | MS.gene073831:intron | 50.0% | |
| TTCCTTGGTTCCCTAGCATC+TGG | + | chr1.3:47486203-47486222 | None:intergenic | 50.0% | |
| TTGAGCTCCTCCTAGACGAT+CGG | + | chr1.3:47482198-47482217 | None:intergenic | 50.0% | |
| TTGGCTGCATTTCTCACCCA+TGG | + | chr1.3:47486135-47486154 | None:intergenic | 50.0% | |
| TTTCTCTGCAACCTTGCCAC+CGG | + | chr1.3:47481744-47481763 | None:intergenic | 50.0% | |
| ! | CACAAGTCTCAAGAGGTGCA+AGG | - | chr1.3:47483156-47483175 | MS.gene073831:CDS | 50.0% |
| ! | CTCTCCCGTTTAAGGTCCTT+TGG | + | chr1.3:47483474-47483493 | None:intergenic | 50.0% |
| !! | AGTGTCAGTGCTGACCTACA+AGG | - | chr1.3:47484759-47484778 | MS.gene073831:CDS | 50.0% |
| !! | CCTGATTCTAGTTTCTCCGG+TGG | - | chr1.3:47481725-47481744 | MS.gene073831:intron | 50.0% |
| !! | GACGTATCAGCTGGTTCTAC+TGG | - | chr1.3:47484597-47484616 | MS.gene073831:CDS | 50.0% |
| !! | GTATCAGCTGGTTCTACTGG+TGG | - | chr1.3:47484600-47484619 | MS.gene073831:CDS | 50.0% |
| !! | TGAGGCGTTGGACTCTAACA+AGG | - | chr1.3:47482408-47482427 | MS.gene073831:intron | 50.0% |
| !! | TTCTAGTTTCTCCGGTGGCA+AGG | - | chr1.3:47481730-47481749 | MS.gene073831:intron | 50.0% |
| AAGACACGAGCCGATGATCC+AGG | + | chr1.3:47483801-47483820 | None:intergenic | 55.0% | |
| ACACGTGTGAGGAAGGTGAG+AGG | - | chr1.3:47480504-47480523 | MS.gene073831:CDS | 55.0% | |
| ACCACTGGGTATCAGCAGCA+AGG | - | chr1.3:47483320-47483339 | MS.gene073831:CDS | 55.0% | |
| AGTGGGTGTGAGAGAGAGAG+AGG | + | chr1.3:47480657-47480676 | None:intergenic | 55.0% | |
| CAAATGACGGCCGATCGTCT+AGG | - | chr1.3:47482185-47482204 | MS.gene073831:CDS | 55.0% | |
| CAACGGCGAACCTTCTGAGT+TGG | - | chr1.3:47483293-47483312 | MS.gene073831:CDS | 55.0% | |
| CAGCAGCAAGGATGGTTGGA+GGG | - | chr1.3:47483332-47483351 | MS.gene073831:CDS | 55.0% | |
| CAGGTACAGGTGCTTCAGAG+AGG | + | chr1.3:47484635-47484654 | None:intergenic | 55.0% | |
| CCTCAATCAGCAACTTGCCC+AGG | + | chr1.3:47486242-47486261 | None:intergenic | 55.0% | |
| CGCTAGGCAGGCTGTCAAAA+CGG | + | chr1.3:47483245-47483264 | None:intergenic | 55.0% | |
| CTAGCATAGGTCCCTCCACA+TGG | + | chr1.3:47485798-47485817 | None:intergenic | 55.0% | |
| CTGGGTATCAGCAGCAAGGA+TGG | - | chr1.3:47483324-47483343 | MS.gene073831:CDS | 55.0% | |
| GAGATCCCAAAGGCAGAGAG+TGG | - | chr1.3:47482256-47482275 | MS.gene073831:intron | 55.0% | |
| GATCGTCTAGGAGGAGCTCA+AGG | - | chr1.3:47482197-47482216 | MS.gene073831:CDS | 55.0% | |
| GCATTTCTCACCCATGGCTG+TGG | + | chr1.3:47486129-47486148 | None:intergenic | 55.0% | |
| GCTAGGCAGGCTGTCAAAAC+GGG | + | chr1.3:47483244-47483263 | None:intergenic | 55.0% | |
| GCTGATATGCTAGCGTTCCC+TGG | - | chr1.3:47483201-47483220 | MS.gene073831:CDS | 55.0% | |
| GGAGGAGGAGGAGAATAGTG+AGG | + | chr1.3:47480891-47480910 | None:intergenic | 55.0% | |
| GTGAGAGAGAGAGAGGTGAG+AGG | + | chr1.3:47480650-47480669 | None:intergenic | 55.0% | |
| GTGAGAGGGTGAGAGAGAGT+GGG | + | chr1.3:47480635-47480654 | None:intergenic | 55.0% | |
| TAGGAGGAGCTCAAGGGATC+AGG | - | chr1.3:47482204-47482223 | MS.gene073831:CDS | 55.0% | |
| TCAGCAGCAAGGATGGTTGG+AGG | - | chr1.3:47483331-47483350 | MS.gene073831:CDS | 55.0% | |
| TCCCAAAGGCAGAGAGTGGT+AGG | - | chr1.3:47482260-47482279 | MS.gene073831:intron | 55.0% | |
| TCCTCCTCCTCCTCCTCTTA+GGG | - | chr1.3:47480899-47480918 | MS.gene073831:CDS | 55.0% | |
| TCCTTGCTGCTGATACCCAG+TGG | + | chr1.3:47483324-47483343 | None:intergenic | 55.0% | |
| TGAGAGGGTGAGAGAGAGTG+GGG | + | chr1.3:47480634-47480653 | None:intergenic | 55.0% | |
| TGTGAGGAAGGTGAGAGGCA+AGG | - | chr1.3:47480509-47480528 | MS.gene073831:CDS | 55.0% | |
| ! | CCTGGGCAAGTTGCTGATTG+AGG | - | chr1.3:47486239-47486258 | MS.gene073831:intron | 55.0% |
| ! | TGCTGATTGAGGAGTCTCGG+TGG | - | chr1.3:47486250-47486269 | MS.gene073831:CDS | 55.0% |
| ! | TTTTGACAGCCTGCCTAGCG+GGG | - | chr1.3:47483245-47483264 | MS.gene073831:CDS | 55.0% |
| !! | CGTTTTGACAGCCTGCCTAG+CGG | - | chr1.3:47483243-47483262 | MS.gene073831:CDS | 55.0% |
| !! | CTCTCTGAAGCACCTGTACC+TGG | - | chr1.3:47484633-47484652 | MS.gene073831:CDS | 55.0% |
| !! | GTTTTGACAGCCTGCCTAGC+GGG | - | chr1.3:47483244-47483263 | MS.gene073831:CDS | 55.0% |
| ACCCTAAGAGGAGGAGGAGG+AGG | + | chr1.3:47480903-47480922 | None:intergenic | 60.0% | |
| ATGACGGCCGATCGTCTAGG+AGG | - | chr1.3:47482188-47482207 | MS.gene073831:CDS | 60.0% | |
| CACCAGCAGGAGCAGCACAT+TGG | - | chr1.3:47483179-47483198 | MS.gene073831:CDS | 60.0% | |
| CACCTTTCTGGGTTGTGGGC+GGG | + | chr1.3:47480568-47480587 | None:intergenic | 60.0% | |
| CCAAGGCAGTGACACGTGTG+AGG | - | chr1.3:47480493-47480512 | MS.gene073831:CDS | 60.0% | |
| CTCCTCCTCCTCCTCCTCTT+AGG | - | chr1.3:47480898-47480917 | MS.gene073831:CDS | 60.0% | |
| GCACCTTTCTGGGTTGTGGG+CGG | + | chr1.3:47480569-47480588 | None:intergenic | 60.0% | |
| GGCAGTGACACGTGTGAGGA+AGG | - | chr1.3:47480497-47480516 | MS.gene073831:CDS | 60.0% | |
| GGTGAGAGGGTGAGAGAGAG+TGG | + | chr1.3:47480636-47480655 | None:intergenic | 60.0% | |
| TGAAACCTTCCCCGCTAGGC+AGG | + | chr1.3:47483257-47483276 | None:intergenic | 60.0% | |
| ! | AAGAGGTGCAAGGCACCAGC+AGG | - | chr1.3:47483166-47483185 | MS.gene073831:CDS | 60.0% |
| ! | AGCCAATGTGCTGCTCCTGC+TGG | + | chr1.3:47483184-47483203 | None:intergenic | 60.0% |
| ! | CCTCACACGTGTCACTGCCT+TGG | + | chr1.3:47480496-47480515 | None:intergenic | 60.0% |
| AGCCCGCCCACAACCCAGAA+AGG | - | chr1.3:47480563-47480582 | MS.gene073831:CDS | 65.0% | |
| !! | TGGGTTGTGGGCGGGCTACT+GGG | + | chr1.3:47480560-47480579 | None:intergenic | 65.0% |
| GACAGCCTGCCTAGCGGGGA+AGG | - | chr1.3:47483249-47483268 | MS.gene073831:CDS | 70.0% | |
| ! | GCGGGCTACTGGGGGAAGGA+TGG | + | chr1.3:47480550-47480569 | None:intergenic | 70.0% |
| !! | CTGGGTTGTGGGCGGGCTAC+TGG | + | chr1.3:47480561-47480580 | None:intergenic | 70.0% |
| !! | GGGTTGTGGGCGGGCTACTG+GGG | + | chr1.3:47480559-47480578 | None:intergenic | 70.0% |
| !! | GGTTGTGGGCGGGCTACTGG+GGG | + | chr1.3:47480558-47480577 | None:intergenic | 70.0% |
| !! | GTGGGCGGGCTACTGGGGGA+AGG | + | chr1.3:47480554-47480573 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 47480486 | 47486362 | 47480486 | ID=MS.gene073831 |
| chr1.3 | mRNA | 47480486 | 47486362 | 47480486 | ID=MS.gene073831.t1;Parent=MS.gene073831 |
| chr1.3 | exon | 47486242 | 47486362 | 47486242 | ID=MS.gene073831.t1.exon1;Parent=MS.gene073831.t1 |
| chr1.3 | CDS | 47486242 | 47486362 | 47486242 | ID=cds.MS.gene073831.t1;Parent=MS.gene073831.t1 |
| chr1.3 | exon | 47485079 | 47485167 | 47485079 | ID=MS.gene073831.t1.exon2;Parent=MS.gene073831.t1 |
| chr1.3 | CDS | 47485079 | 47485167 | 47485079 | ID=cds.MS.gene073831.t1;Parent=MS.gene073831.t1 |
| chr1.3 | exon | 47482979 | 47484892 | 47482979 | ID=MS.gene073831.t1.exon3;Parent=MS.gene073831.t1 |
| chr1.3 | CDS | 47482979 | 47484892 | 47482979 | ID=cds.MS.gene073831.t1;Parent=MS.gene073831.t1 |
| chr1.3 | exon | 47482068 | 47482251 | 47482068 | ID=MS.gene073831.t1.exon4;Parent=MS.gene073831.t1 |
| chr1.3 | CDS | 47482068 | 47482251 | 47482068 | ID=cds.MS.gene073831.t1;Parent=MS.gene073831.t1 |
| chr1.3 | exon | 47480486 | 47481096 | 47480486 | ID=MS.gene073831.t1.exon5;Parent=MS.gene073831.t1 |
| chr1.3 | CDS | 47480486 | 47481096 | 47480486 | ID=cds.MS.gene073831.t1;Parent=MS.gene073831.t1 |
| Gene Sequence |
| Protein sequence |
