Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060355.t1 | AES91767.2 | 96 | 954 | 35 | 2 | 1 | 951 | 42 | 995 | 0.00E+00 | 1805.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060355.t1 | Q9QYI4 | 33.7 | 172 | 70 | 3 | 1 | 128 | 1 | 172 | 4.0e-11 | 72.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060355.t1 | G7JJ17 | 96.0 | 954 | 35 | 2 | 1 | 951 | 42 | 995 | 0.0e+00 | 1805.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051744 | MS.gene060355 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene060355 | 0.826531 | 2.58E-54 | -1.69E-46 |
| MS.gene052612 | MS.gene060355 | 0.81905 | 1.42E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene060355 | 0.817138 | 3.85E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene060355 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene055694 | MS.gene060355 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene060355 | 0.82489 | 6.32E-54 | -1.69E-46 |
| MS.gene05978 | MS.gene060355 | 0.806959 | 6.38E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene061872 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene062156 | 0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene064321 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene065379 | 0.819857 | 9.32E-53 | -1.69E-46 |
| MS.gene060355 | MS.gene065825 | 0.813687 | 2.26E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene06723 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene070943 | 0.827471 | 1.54E-54 | -1.69E-46 |
| MS.gene060355 | MS.gene071380 | 0.836257 | 1.04E-56 | -1.69E-46 |
| MS.gene060355 | MS.gene073831 | 0.819437 | 1.16E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene08581 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene21091 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene23030 | 0.807209 | 5.65E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene23893 | 0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene24268 | 0.820957 | 5.21E-53 | -1.69E-46 |
| MS.gene060355 | MS.gene24590 | 0.824843 | 6.48E-54 | -1.69E-46 |
| MS.gene060355 | MS.gene24897 | 0.860101 | 2.61E-63 | -1.69E-46 |
| MS.gene060355 | MS.gene25966 | 0.802995 | 4.31E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene26972 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene27302 | 0.801037 | 1.09E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene27569 | 0.803972 | 2.70E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene27971 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene27972 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene29022 | 0.805375 | 1.38E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene30946 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene35528 | 0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene35529 | 0.8085 | 3.00E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene39793 | 0.803537 | 3.32E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene41679 | 0.819893 | 9.14E-53 | -1.69E-46 |
| MS.gene060355 | MS.gene43161 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene44304 | 0.807738 | 4.36E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene45269 | 0.823229 | 1.55E-53 | -1.69E-46 |
| MS.gene060355 | MS.gene45918 | 0.805979 | 1.03E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene47933 | 0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene49423 | 0.817595 | 3.04E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene51818 | 0.809921 | 1.49E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene53501 | 0.813714 | 2.23E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene56067 | 0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene56414 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene56459 | -0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene56562 | 0.81867 | 1.74E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene57428 | 0.80659 | 7.64E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene60118 | 0.811778 | 5.91E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene60935 | 0.83588 | 1.30E-56 | -1.69E-46 |
| MS.gene060355 | MS.gene63434 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene66293 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene67139 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene67168 | 0.832033 | 1.19E-55 | -1.69E-46 |
| MS.gene060355 | MS.gene68608 | 0.834957 | 2.22E-56 | -1.69E-46 |
| MS.gene060355 | MS.gene69459 | 0.827723 | 1.34E-54 | -1.69E-46 |
| MS.gene060355 | MS.gene71705 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene79535 | 0.844686 | 6.48E-59 | -1.69E-46 |
| MS.gene060355 | MS.gene82397 | -0.805988 | 1.02E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene84454 | 0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene89552 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene89726 | 0.80258 | 5.25E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene90689 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene95698 | 0.816872 | 4.42E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene96210 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene060355 | MS.gene97761 | 0.805203 | 1.50E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene99825 | 0.80706 | 6.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060355.t1 | MTR_4g118660 | 96.855 | 954 | 27 | 2 | 1 | 951 | 42 | 995 | 0.0 | 1929 |
| MS.gene060355.t1 | MTR_8g011080 | 81.562 | 781 | 43 | 6 | 1 | 779 | 54 | 735 | 0.0 | 1229 |
| MS.gene060355.t1 | MTR_8g011080 | 32.843 | 204 | 112 | 9 | 749 | 945 | 419 | 604 | 1.07e-19 | 95.1 |
| MS.gene060355.t1 | MTR_2g020420 | 54.499 | 978 | 368 | 22 | 1 | 949 | 1 | 930 | 0.0 | 967 |
| MS.gene060355.t1 | MTR_2g020420 | 53.582 | 991 | 370 | 22 | 1 | 949 | 1 | 943 | 0.0 | 959 |
| MS.gene060355.t1 | MTR_7g114150 | 39.918 | 729 | 320 | 19 | 1 | 655 | 1 | 685 | 9.12e-141 | 448 |
| MS.gene060355.t1 | MTR_7g114150 | 33.571 | 280 | 157 | 9 | 679 | 949 | 423 | 682 | 2.57e-32 | 136 |
| MS.gene060355.t1 | MTR_7g114150 | 38.356 | 219 | 121 | 7 | 732 | 945 | 870 | 1079 | 1.29e-30 | 130 |
| MS.gene060355.t1 | MTR_7g114150 | 32.420 | 219 | 135 | 7 | 434 | 648 | 870 | 1079 | 2.59e-22 | 103 |
| MS.gene060355.t1 | MTR_1g081970 | 38.752 | 689 | 346 | 16 | 1 | 653 | 1 | 649 | 1.36e-140 | 435 |
| MS.gene060355.t1 | MTR_1g081970 | 32.423 | 293 | 170 | 13 | 672 | 945 | 361 | 644 | 5.76e-32 | 133 |
| MS.gene060355.t1 | MTR_1g060440 | 37.664 | 685 | 355 | 14 | 1 | 653 | 1 | 645 | 3.37e-131 | 410 |
| MS.gene060355.t1 | MTR_1g060440 | 36.441 | 236 | 132 | 11 | 720 | 945 | 413 | 640 | 1.83e-31 | 132 |
| MS.gene060355.t1 | MTR_3g099170 | 29.682 | 785 | 399 | 23 | 1 | 654 | 15 | 777 | 1.46e-85 | 293 |
| MS.gene060355.t1 | MTR_3g099170 | 34.016 | 244 | 145 | 8 | 714 | 949 | 540 | 775 | 5.90e-31 | 131 |
| MS.gene060355.t1 | MTR_1g051765 | 43.556 | 225 | 121 | 3 | 430 | 653 | 145 | 364 | 1.84e-57 | 202 |
| MS.gene060355.t1 | MTR_1g051765 | 29.630 | 270 | 174 | 11 | 683 | 945 | 99 | 359 | 5.59e-27 | 114 |
| MS.gene060355.t1 | MTR_6g059870 | 40.672 | 268 | 139 | 5 | 1 | 258 | 1 | 258 | 2.99e-48 | 184 |
| MS.gene060355.t1 | MTR_6g059870 | 35.268 | 224 | 121 | 8 | 739 | 949 | 469 | 681 | 2.23e-23 | 107 |
| MS.gene060355.t1 | MTR_3g091040 | 36.029 | 272 | 168 | 4 | 393 | 659 | 426 | 696 | 7.46e-48 | 183 |
| MS.gene060355.t1 | MTR_3g091040 | 35.156 | 256 | 142 | 10 | 707 | 949 | 445 | 689 | 1.12e-30 | 130 |
| MS.gene060355.t1 | MTR_1g081960 | 38.559 | 236 | 124 | 5 | 1 | 234 | 51 | 267 | 1.63e-42 | 158 |
| MS.gene060355.t1 | MTR_5g097170 | 35.443 | 237 | 148 | 5 | 424 | 657 | 452 | 686 | 1.65e-42 | 166 |
| MS.gene060355.t1 | MTR_5g097170 | 38.565 | 223 | 102 | 4 | 1 | 223 | 1 | 188 | 2.57e-36 | 147 |
| MS.gene060355.t1 | MTR_5g097170 | 33.755 | 237 | 141 | 8 | 722 | 949 | 452 | 681 | 5.79e-31 | 130 |
| MS.gene060355.t1 | MTR_3g082810 | 33.891 | 239 | 154 | 4 | 424 | 659 | 443 | 680 | 2.18e-42 | 166 |
| MS.gene060355.t1 | MTR_3g082810 | 36.323 | 223 | 105 | 4 | 1 | 223 | 1 | 186 | 3.54e-32 | 134 |
| MS.gene060355.t1 | MTR_3g082810 | 32.203 | 295 | 179 | 10 | 672 | 949 | 383 | 673 | 3.61e-30 | 128 |
| MS.gene060355.t1 | MTR_5g066100 | 35.371 | 229 | 130 | 7 | 1 | 221 | 2 | 220 | 1.59e-31 | 127 |
| MS.gene060355.t1 | MTR_5g029070 | 34.894 | 235 | 141 | 6 | 430 | 659 | 351 | 578 | 2.14e-30 | 128 |
| MS.gene060355.t1 | MTR_5g029070 | 34.711 | 242 | 137 | 9 | 718 | 949 | 341 | 571 | 4.90e-27 | 117 |
| MS.gene060355.t1 | MTR_5g029070 | 34.894 | 235 | 141 | 6 | 430 | 659 | 326 | 553 | 2.37e-30 | 127 |
| MS.gene060355.t1 | MTR_5g029070 | 34.711 | 242 | 137 | 9 | 718 | 949 | 316 | 546 | 5.54e-27 | 117 |
| MS.gene060355.t1 | MTR_3g100330 | 33.929 | 224 | 100 | 5 | 1 | 221 | 1 | 179 | 8.02e-28 | 113 |
| MS.gene060355.t1 | MTR_4g093930 | 31.873 | 251 | 143 | 4 | 4 | 226 | 5 | 255 | 8.42e-28 | 119 |
| MS.gene060355.t1 | MTR_2g009520 | 36.154 | 130 | 81 | 2 | 4 | 132 | 5 | 133 | 2.10e-15 | 80.9 |
| MS.gene060355.t1 | MTR_2g435450 | 38.793 | 116 | 62 | 3 | 44 | 155 | 19 | 129 | 1.03e-14 | 75.9 |
| MS.gene060355.t1 | MTR_1g082220 | 48.649 | 74 | 38 | 0 | 1 | 74 | 1 | 74 | 7.78e-14 | 71.6 |
| MS.gene060355.t1 | MTR_4g120450 | 50.769 | 65 | 32 | 0 | 66 | 130 | 36 | 100 | 6.35e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060355.t1 | AT5G18750 | 39.300 | 972 | 464 | 28 | 4 | 945 | 3 | 878 | 0.0 | 569 |
| MS.gene060355.t1 | AT5G18750 | 36.290 | 248 | 143 | 8 | 409 | 651 | 644 | 881 | 3.33e-40 | 160 |
| MS.gene060355.t1 | AT3G06340 | 42.060 | 699 | 356 | 15 | 1 | 682 | 1 | 667 | 8.70e-143 | 441 |
| MS.gene060355.t1 | AT3G06340 | 34.672 | 274 | 154 | 11 | 685 | 947 | 389 | 648 | 2.21e-33 | 138 |
| MS.gene060355.t1 | AT3G06340 | 42.060 | 699 | 356 | 15 | 1 | 682 | 1 | 667 | 8.70e-143 | 441 |
| MS.gene060355.t1 | AT3G06340 | 34.672 | 274 | 154 | 11 | 685 | 947 | 389 | 648 | 2.21e-33 | 138 |
| MS.gene060355.t1 | AT3G06340 | 42.060 | 699 | 356 | 15 | 1 | 682 | 1 | 667 | 8.70e-143 | 441 |
| MS.gene060355.t1 | AT3G06340 | 34.672 | 274 | 154 | 11 | 685 | 947 | 389 | 648 | 2.21e-33 | 138 |
| MS.gene060355.t1 | AT3G06340 | 42.060 | 699 | 356 | 15 | 1 | 682 | 1 | 667 | 8.70e-143 | 441 |
| MS.gene060355.t1 | AT3G06340 | 34.672 | 274 | 154 | 11 | 685 | 947 | 389 | 648 | 2.21e-33 | 138 |
| MS.gene060355.t1 | AT5G27240 | 34.652 | 733 | 359 | 16 | 1 | 654 | 1 | 692 | 2.49e-114 | 377 |
| MS.gene060355.t1 | AT5G27240 | 35.526 | 228 | 124 | 11 | 726 | 945 | 474 | 686 | 3.46e-27 | 120 |
| MS.gene060355.t1 | AT5G27240 | 34.583 | 240 | 136 | 8 | 711 | 944 | 872 | 1096 | 3.62e-26 | 116 |
| MS.gene060355.t1 | AT5G27240 | 34.361 | 227 | 120 | 11 | 436 | 652 | 895 | 1102 | 3.43e-17 | 87.4 |
| MS.gene060355.t1 | AT5G27240 | 34.652 | 733 | 359 | 16 | 1 | 654 | 1 | 692 | 2.49e-114 | 377 |
| MS.gene060355.t1 | AT5G27240 | 35.526 | 228 | 124 | 11 | 726 | 945 | 474 | 686 | 3.46e-27 | 120 |
| MS.gene060355.t1 | AT5G27240 | 34.583 | 240 | 136 | 8 | 711 | 944 | 872 | 1096 | 3.62e-26 | 116 |
| MS.gene060355.t1 | AT5G27240 | 34.361 | 227 | 120 | 11 | 436 | 652 | 895 | 1102 | 3.43e-17 | 87.4 |
| MS.gene060355.t1 | AT5G27240 | 34.652 | 733 | 359 | 16 | 1 | 654 | 1 | 692 | 2.49e-114 | 377 |
| MS.gene060355.t1 | AT5G27240 | 35.526 | 228 | 124 | 11 | 726 | 945 | 474 | 686 | 3.46e-27 | 120 |
| MS.gene060355.t1 | AT5G27240 | 34.583 | 240 | 136 | 8 | 711 | 944 | 872 | 1096 | 3.62e-26 | 116 |
| MS.gene060355.t1 | AT5G27240 | 34.361 | 227 | 120 | 11 | 436 | 652 | 895 | 1102 | 3.43e-17 | 87.4 |
| MS.gene060355.t1 | AT5G53150 | 32.612 | 693 | 400 | 19 | 1 | 648 | 1 | 671 | 5.88e-95 | 316 |
| MS.gene060355.t1 | AT5G53150 | 36.207 | 232 | 131 | 8 | 727 | 948 | 450 | 674 | 3.62e-32 | 134 |
| MS.gene060355.t1 | AT5G53150 | 32.612 | 693 | 400 | 19 | 1 | 648 | 1 | 671 | 5.88e-95 | 316 |
| MS.gene060355.t1 | AT5G53150 | 36.207 | 232 | 131 | 8 | 727 | 948 | 450 | 674 | 3.62e-32 | 134 |
| MS.gene060355.t1 | AT5G18740 | 48.770 | 244 | 112 | 3 | 429 | 659 | 169 | 412 | 1.49e-68 | 235 |
| MS.gene060355.t1 | AT5G18740 | 30.672 | 238 | 139 | 9 | 731 | 948 | 173 | 404 | 1.04e-22 | 102 |
| MS.gene060355.t1 | AT5G18730 | 47.967 | 246 | 114 | 2 | 433 | 664 | 43 | 288 | 8.71e-67 | 233 |
| MS.gene060355.t1 | AT5G18730 | 34.597 | 211 | 113 | 7 | 744 | 933 | 304 | 510 | 3.87e-27 | 117 |
| MS.gene060355.t1 | AT5G18730 | 34.568 | 243 | 133 | 12 | 731 | 951 | 43 | 281 | 4.73e-24 | 107 |
| MS.gene060355.t1 | AT3G04980 | 40.909 | 308 | 148 | 7 | 1 | 299 | 1 | 283 | 6.19e-55 | 208 |
| MS.gene060355.t1 | AT3G04980 | 33.049 | 469 | 251 | 14 | 227 | 661 | 281 | 720 | 1.38e-50 | 194 |
| MS.gene060355.t1 | AT3G04980 | 34.043 | 282 | 159 | 10 | 373 | 648 | 916 | 1176 | 1.16e-26 | 118 |
| MS.gene060355.t1 | AT3G04980 | 36.726 | 226 | 118 | 11 | 726 | 945 | 970 | 1176 | 3.15e-24 | 110 |
| MS.gene060355.t1 | AT3G04980 | 31.878 | 229 | 136 | 10 | 725 | 945 | 490 | 706 | 3.09e-23 | 107 |
| MS.gene060355.t1 | AT3G04980 | 40.909 | 308 | 148 | 7 | 1 | 299 | 1 | 283 | 6.19e-55 | 208 |
| MS.gene060355.t1 | AT3G04980 | 33.049 | 469 | 251 | 14 | 227 | 661 | 281 | 720 | 1.38e-50 | 194 |
| MS.gene060355.t1 | AT3G04980 | 34.043 | 282 | 159 | 10 | 373 | 648 | 916 | 1176 | 1.16e-26 | 118 |
| MS.gene060355.t1 | AT3G04980 | 36.726 | 226 | 118 | 11 | 726 | 945 | 970 | 1176 | 3.15e-24 | 110 |
| MS.gene060355.t1 | AT3G04980 | 31.878 | 229 | 136 | 10 | 725 | 945 | 490 | 706 | 3.09e-23 | 107 |
| MS.gene060355.t1 | AT3G04980 | 33.049 | 469 | 251 | 14 | 227 | 661 | 263 | 702 | 1.55e-50 | 194 |
| MS.gene060355.t1 | AT3G04980 | 39.310 | 290 | 142 | 7 | 19 | 299 | 1 | 265 | 1.11e-46 | 182 |
| MS.gene060355.t1 | AT3G04980 | 34.043 | 282 | 159 | 10 | 373 | 648 | 898 | 1158 | 1.24e-26 | 118 |
| MS.gene060355.t1 | AT3G04980 | 36.726 | 226 | 118 | 11 | 726 | 945 | 952 | 1158 | 3.18e-24 | 110 |
| MS.gene060355.t1 | AT3G04980 | 31.878 | 229 | 136 | 10 | 725 | 945 | 472 | 688 | 3.25e-23 | 107 |
| MS.gene060355.t1 | AT3G05110 | 44.286 | 210 | 105 | 3 | 431 | 639 | 163 | 361 | 3.75e-50 | 182 |
| MS.gene060355.t1 | AT3G05110 | 34.466 | 206 | 112 | 10 | 727 | 926 | 161 | 349 | 2.23e-23 | 103 |
| MS.gene060355.t1 | AT3G04960 | 40.304 | 263 | 137 | 8 | 388 | 648 | 240 | 484 | 1.09e-49 | 184 |
| MS.gene060355.t1 | AT3G04960 | 35.043 | 234 | 128 | 8 | 723 | 949 | 272 | 488 | 2.04e-30 | 127 |
| MS.gene060355.t1 | AT3G04960 | 40.304 | 263 | 137 | 8 | 388 | 648 | 289 | 533 | 1.62e-49 | 185 |
| MS.gene060355.t1 | AT3G04960 | 35.043 | 234 | 128 | 8 | 723 | 949 | 321 | 537 | 1.64e-30 | 128 |
| MS.gene060355.t1 | AT3G04960 | 40.304 | 263 | 137 | 8 | 388 | 648 | 292 | 536 | 3.86e-49 | 184 |
| MS.gene060355.t1 | AT3G04960 | 35.043 | 234 | 128 | 8 | 723 | 949 | 324 | 540 | 5.07e-30 | 126 |
| MS.gene060355.t1 | AT3G04960 | 40.304 | 263 | 137 | 8 | 388 | 648 | 341 | 585 | 5.51e-49 | 184 |
| MS.gene060355.t1 | AT3G04960 | 35.043 | 234 | 128 | 8 | 723 | 949 | 373 | 589 | 4.49e-30 | 127 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G37380 | 38.028 | 284 | 123 | 5 | 1 | 232 | 1 | 283 | 2.45e-47 | 175 |
| MS.gene060355.t1 | AT5G53150 | 39.922 | 258 | 122 | 8 | 1 | 237 | 1 | 246 | 5.23e-46 | 174 |
| MS.gene060355.t1 | AT2G05230 | 37.805 | 246 | 146 | 6 | 417 | 659 | 465 | 706 | 6.69e-46 | 177 |
| MS.gene060355.t1 | AT2G05230 | 36.564 | 227 | 118 | 5 | 1 | 223 | 1 | 205 | 7.03e-35 | 143 |
| MS.gene060355.t1 | AT2G05230 | 31.602 | 231 | 144 | 8 | 727 | 949 | 475 | 699 | 8.95e-27 | 117 |
| MS.gene060355.t1 | AT2G05250 | 37.805 | 246 | 146 | 6 | 417 | 659 | 465 | 706 | 6.69e-46 | 177 |
| MS.gene060355.t1 | AT2G05250 | 36.564 | 227 | 118 | 5 | 1 | 223 | 1 | 205 | 7.03e-35 | 143 |
| MS.gene060355.t1 | AT2G05250 | 31.602 | 231 | 144 | 8 | 727 | 949 | 475 | 699 | 8.95e-27 | 117 |
| MS.gene060355.t1 | AT2G25560 | 40.506 | 237 | 134 | 2 | 1 | 231 | 1 | 236 | 1.73e-45 | 175 |
| MS.gene060355.t1 | AT2G25560 | 37.104 | 221 | 135 | 4 | 433 | 651 | 430 | 648 | 1.73e-36 | 147 |
| MS.gene060355.t1 | AT2G25560 | 35.897 | 234 | 133 | 8 | 725 | 949 | 424 | 649 | 7.37e-27 | 117 |
| MS.gene060355.t1 | AT5G53150 | 39.922 | 258 | 122 | 8 | 1 | 237 | 1 | 246 | 2.63e-45 | 176 |
| MS.gene060355.t1 | AT5G53150 | 38.393 | 224 | 134 | 4 | 428 | 648 | 478 | 700 | 2.95e-43 | 169 |
| MS.gene060355.t1 | AT5G53150 | 36.207 | 232 | 131 | 8 | 727 | 948 | 479 | 703 | 3.40e-32 | 135 |
| MS.gene060355.t1 | AT5G53150 | 39.922 | 258 | 122 | 8 | 1 | 237 | 1 | 246 | 2.63e-45 | 176 |
| MS.gene060355.t1 | AT5G53150 | 38.393 | 224 | 134 | 4 | 428 | 648 | 478 | 700 | 2.95e-43 | 169 |
| MS.gene060355.t1 | AT5G53150 | 36.207 | 232 | 131 | 8 | 727 | 948 | 479 | 703 | 3.40e-32 | 135 |
| MS.gene060355.t1 | AT5G53150 | 39.922 | 258 | 122 | 8 | 1 | 237 | 1 | 246 | 2.63e-45 | 176 |
| MS.gene060355.t1 | AT5G53150 | 38.393 | 224 | 134 | 4 | 428 | 648 | 478 | 700 | 2.95e-43 | 169 |
| MS.gene060355.t1 | AT5G53150 | 36.207 | 232 | 131 | 8 | 727 | 948 | 479 | 703 | 3.40e-32 | 135 |
| MS.gene060355.t1 | AT5G35753 | 37.333 | 225 | 136 | 5 | 430 | 651 | 199 | 421 | 2.45e-43 | 164 |
| MS.gene060355.t1 | AT5G35753 | 32.468 | 231 | 142 | 8 | 727 | 949 | 198 | 422 | 1.21e-28 | 120 |
| MS.gene060355.t1 | AT4G27980 | 36.585 | 246 | 143 | 6 | 417 | 658 | 306 | 542 | 5.93e-42 | 162 |
| MS.gene060355.t1 | AT4G27980 | 32.203 | 236 | 137 | 12 | 718 | 945 | 309 | 529 | 5.98e-22 | 101 |
| MS.gene060355.t1 | AT4G27980 | 36.585 | 246 | 143 | 6 | 417 | 658 | 344 | 580 | 9.15e-42 | 163 |
| MS.gene060355.t1 | AT4G27980 | 32.203 | 236 | 137 | 12 | 718 | 945 | 347 | 567 | 4.60e-22 | 102 |
| MS.gene060355.t1 | AT4G27980 | 36.585 | 246 | 143 | 6 | 417 | 658 | 343 | 579 | 1.02e-41 | 162 |
| MS.gene060355.t1 | AT4G27980 | 32.203 | 236 | 137 | 12 | 718 | 945 | 346 | 566 | 5.00e-22 | 102 |
| MS.gene060355.t1 | AT4G19570 | 36.800 | 250 | 133 | 5 | 1 | 226 | 1 | 249 | 1.33e-37 | 149 |
| MS.gene060355.t1 | AT4G19590 | 47.887 | 142 | 73 | 1 | 1 | 142 | 1 | 141 | 2.56e-34 | 135 |
| MS.gene060355.t1 | AT4G19590 | 47.887 | 142 | 73 | 1 | 1 | 142 | 1 | 141 | 4.05e-34 | 135 |
| MS.gene060355.t1 | AT4G19580 | 52.066 | 121 | 57 | 1 | 1 | 121 | 1 | 120 | 4.50e-33 | 130 |
| MS.gene060355.t1 | AT2G01710 | 35.556 | 225 | 108 | 4 | 4 | 223 | 7 | 199 | 5.16e-32 | 127 |
| MS.gene060355.t1 | AT2G01710 | 35.556 | 225 | 108 | 4 | 4 | 223 | 51 | 243 | 1.20e-31 | 127 |
| MS.gene060355.t1 | AT4G19590 | 45.385 | 130 | 70 | 1 | 13 | 142 | 2 | 130 | 7.06e-28 | 116 |
| MS.gene060355.t1 | AT5G37750 | 31.858 | 226 | 110 | 6 | 11 | 235 | 23 | 205 | 1.15e-26 | 110 |
| MS.gene060355.t1 | AT5G18720 | 31.579 | 228 | 131 | 7 | 744 | 949 | 114 | 338 | 1.55e-25 | 109 |
| MS.gene060355.t1 | AT5G18720 | 31.579 | 228 | 131 | 7 | 744 | 949 | 114 | 338 | 1.55e-25 | 109 |
| MS.gene060355.t1 | AT5G18720 | 31.579 | 228 | 131 | 7 | 744 | 949 | 114 | 338 | 1.55e-25 | 109 |
| MS.gene060355.t1 | AT2G35540 | 32.911 | 237 | 125 | 10 | 431 | 651 | 368 | 586 | 1.95e-25 | 112 |
| MS.gene060355.t1 | AT2G35540 | 40.310 | 129 | 76 | 1 | 5 | 133 | 10 | 137 | 3.66e-19 | 93.2 |
| MS.gene060355.t1 | AT2G35540 | 26.840 | 231 | 156 | 8 | 725 | 949 | 364 | 587 | 2.14e-17 | 87.4 |
| MS.gene060355.t1 | AT5G50115 | 32.189 | 233 | 120 | 7 | 430 | 659 | 270 | 467 | 3.07e-25 | 111 |
| MS.gene060355.t1 | AT5G37440 | 32.143 | 224 | 109 | 7 | 1 | 223 | 16 | 197 | 8.12e-25 | 105 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.02e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G64360 | 29.032 | 217 | 139 | 5 | 15 | 226 | 25 | 231 | 1.42e-24 | 108 |
| MS.gene060355.t1 | AT5G09540 | 27.803 | 223 | 130 | 5 | 4 | 223 | 10 | 204 | 2.32e-21 | 95.9 |
| MS.gene060355.t1 | AT5G37760 | 37.594 | 133 | 52 | 2 | 13 | 145 | 79 | 180 | 1.02e-15 | 77.4 |
| MS.gene060355.t1 | AT5G50510 | 36.134 | 119 | 70 | 2 | 5 | 123 | 13 | 125 | 1.79e-14 | 74.3 |
| MS.gene060355.t1 | AT5G50620 | 36.134 | 119 | 70 | 2 | 5 | 123 | 13 | 125 | 1.79e-14 | 74.3 |
| MS.gene060355.t1 | AT1G62970 | 29.851 | 134 | 89 | 3 | 7 | 135 | 17 | 150 | 7.15e-14 | 76.6 |
Find 202 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTGAATTGCATGTTTAT+TGG | 0.168176 | 8.4:+12861222 | MS.gene060355:CDS |
| GATTGCTGTTACTCAAAATT+TGG | 0.178001 | 8.4:+12860860 | MS.gene060355:CDS |
| ACTTATTACGACCTTCAAAA+AGG | 0.206218 | 8.4:+12859926 | MS.gene060355:CDS |
| GAAGGAGTAGGCGTTCATTT+AGG | 0.214969 | 8.4:+12860792 | MS.gene060355:CDS |
| CAATTCTTCAACTTTGAAAC+TGG | 0.228417 | 8.4:+12861092 | MS.gene060355:CDS |
| GGTGTTCGAGTTTGTAAAAT+TGG | 0.234936 | 8.4:-12859383 | None:intergenic |
| CGCGATTTCCTTGGCCCTTA+AGG | 0.238842 | 8.4:-12858924 | None:intergenic |
| AGTTCCAGGTTGGTCAAATA+TGG | 0.252963 | 8.4:+12861129 | MS.gene060355:CDS |
| ACGGTGTGCGCCGTACTTTC+TGG | 0.257066 | 8.4:+12859452 | MS.gene060355:CDS |
| ATCCGAGGAAAGGGGAAGTA+TGG | 0.278313 | 8.4:+12861420 | MS.gene060355:CDS |
| CTCTCCTGGATTTCGGTTGC+AGG | 0.278668 | 8.4:+12860317 | MS.gene060355:CDS |
| TCTGGAATTTCAAAAGCTTC+TGG | 0.280710 | 8.4:-12861065 | None:intergenic |
| TTAATTTGAAAGCTGGAATT+TGG | 0.281271 | 8.4:-12861658 | None:intergenic |
| TCAATCTTGGAGCATGTTAC+TGG | 0.283866 | 8.4:+12861548 | MS.gene060355:CDS |
| TGCCAGAGAATACCACTAAA+TGG | 0.289536 | 8.4:+12861261 | MS.gene060355:CDS |
| TTTGCTGCTGTGGAGGCTGC+TGG | 0.292654 | 8.4:-12859405 | None:intergenic |
| TCATACTTCACGGAACAAAA+TGG | 0.306143 | 8.4:-12859484 | None:intergenic |
| AAGGAGTAGGCGTTCATTTA+GGG | 0.310696 | 8.4:+12860793 | MS.gene060355:CDS |
| TTAATCTGACCATAGTATTT+CGG | 0.323531 | 8.4:-12861179 | None:intergenic |
| GCTCTTCGTTGCATATATTC+TGG | 0.323714 | 8.4:+12859558 | MS.gene060355:CDS |
| TTCCTCTTTCTCTTCACATC+TGG | 0.324156 | 8.4:-12859721 | None:intergenic |
| CTGGAATTTCAAAAGCTTCT+GGG | 0.334443 | 8.4:-12861064 | None:intergenic |
| TCTGCTGAGCAGAAAGTATT+TGG | 0.336334 | 8.4:+12859067 | MS.gene060355:CDS |
| AAAGGATTCTCTTGATGATA+TGG | 0.336736 | 8.4:+12861016 | MS.gene060355:CDS |
| CTAATTAACGCATAGAATCT+AGG | 0.347763 | 8.4:-12860285 | None:intergenic |
| ATGGCGATCTGAGAGGCTTC+TGG | 0.348375 | 8.4:+12861690 | MS.gene060355:CDS |
| AAGTACTCTCTCCTGGATTT+CGG | 0.348780 | 8.4:+12860310 | MS.gene060355:CDS |
| GTTTATAGAGACTTCAATCT+TGG | 0.353166 | 8.4:+12861535 | MS.gene060355:CDS |
| GAGGTCCCTTGATAAGTTCC+AGG | 0.354922 | 8.4:+12861115 | MS.gene060355:CDS |
| TTCAGGGGAAAGTCAATAGA+AGG | 0.362252 | 8.4:+12861584 | MS.gene060355:CDS |
| GCTATCTACGATTCAATAGA+TGG | 0.363781 | 8.4:+12860258 | MS.gene060355:CDS |
| TTTATTGGCTTGCTTGCTGC+TGG | 0.364422 | 8.4:+12861237 | MS.gene060355:CDS |
| AGGCTTCTGGGAACTTGATC+CGG | 0.371908 | 8.4:+12861703 | MS.gene060355:CDS |
| CGGAAAAGAAGATGGAAAAC+AGG | 0.378926 | 8.4:+12858945 | MS.gene060355:CDS |
| GCTTGTGTCAACTTTGACCT+TGG | 0.379722 | 8.4:-12860979 | None:intergenic |
| TTGATTTCATCATTGTCATC+TGG | 0.381903 | 8.4:-12860360 | None:intergenic |
| AAGCAGATGGATAAAACTAT+AGG | 0.383386 | 8.4:+12860108 | MS.gene060355:CDS |
| CTCATCTGGTTATGTTCAAA+AGG | 0.384408 | 8.4:+12860466 | MS.gene060355:CDS |
| GAAGCTGCATTTAAGCTGAT+TGG | 0.385175 | 8.4:+12859214 | MS.gene060355:CDS |
| GGCTCGTAAATTTGCTCTTA+AGG | 0.386165 | 8.4:+12858979 | MS.gene060355:CDS |
| GCAATCTCTTCAAGATTCAT+TGG | 0.389797 | 8.4:-12860843 | None:intergenic |
| GAAATAGTTGCTGGTAAGAA+TGG | 0.390236 | 8.4:+12859802 | MS.gene060355:CDS |
| GGCTTTCTAGAGACACCAAC+AGG | 0.390474 | 8.4:-12859700 | None:intergenic |
| TTAAATTTCCCACAAGCAAC+AGG | 0.390937 | 8.4:-12860402 | None:intergenic |
| TTTCTTGAAAGGCTTTGTAT+TGG | 0.393963 | 8.4:-12859671 | None:intergenic |
| GCCGTCATCTTCCCATTTAG+TGG | 0.395969 | 8.4:-12861273 | None:intergenic |
| GGGAAGTATGGGCTCTATAT+AGG | 0.398074 | 8.4:+12861432 | MS.gene060355:CDS |
| CTTGTGTCAACTTTGACCTT+GGG | 0.403190 | 8.4:-12860978 | None:intergenic |
| CAACAAAGAAGAGGCCTTAA+GGG | 0.404937 | 8.4:+12858910 | MS.gene060355:CDS |
| AGCAGATGGATAAAACTATA+GGG | 0.409553 | 8.4:+12860109 | MS.gene060355:CDS |
| TTGAAATTCGTAGGAACCTT+CGG | 0.413384 | 8.4:-12859334 | None:intergenic |
| ATGACAATGATGAAATCAAA+TGG | 0.415391 | 8.4:+12860364 | MS.gene060355:CDS |
| GCAACAAAGAAGAGGCCTTA+AGG | 0.416628 | 8.4:+12858909 | MS.gene060355:CDS |
| GTGTTCGAGTTTGTAAAATT+GGG | 0.417957 | 8.4:-12859382 | None:intergenic |
| AGCTGATCCAAAAGATGAAC+AGG | 0.418291 | 8.4:+12860026 | MS.gene060355:CDS |
| ATTTGGACAATTTGATGTCT+TGG | 0.418403 | 8.4:-12860154 | None:intergenic |
| AAGTCAATAGAAGGTTCTTC+AGG | 0.421151 | 8.4:+12861593 | MS.gene060355:CDS |
| CCTTGGAAGCTTGCTGACTT+AGG | 0.424318 | 8.4:-12859609 | None:intergenic |
| TCAGGATAAACATAAGCATT+TGG | 0.424694 | 8.4:-12860171 | None:intergenic |
| GATGGAATGCCGAAATACTA+TGG | 0.427411 | 8.4:+12861170 | MS.gene060355:CDS |
| CAAGTACAAGCTGATCCTAT+TGG | 0.428339 | 8.4:+12861380 | MS.gene060355:CDS |
| TGAACAGGTAAAACAGAAAC+AGG | 0.436385 | 8.4:+12860041 | MS.gene060355:CDS |
| AAGTTGAAGAATTGAGCATC+TGG | 0.438202 | 8.4:-12861083 | None:intergenic |
| ATTGTGTAATTCTTGCCAAT+AGG | 0.439527 | 8.4:-12861395 | None:intergenic |
| ATCTTTCAAAATGACTGGTC+AGG | 0.440382 | 8.4:+12860770 | MS.gene060355:CDS |
| TCCCATTTAGTGGTATTCTC+TGG | 0.441071 | 8.4:-12861263 | None:intergenic |
| TAAACATGCAATTCAATAGT+AGG | 0.447477 | 8.4:-12861218 | None:intergenic |
| ACACAATATATCCGAGGAAA+GGG | 0.448362 | 8.4:+12861411 | MS.gene060355:CDS |
| TGGCGATCTGAGAGGCTTCT+GGG | 0.449928 | 8.4:+12861691 | MS.gene060355:CDS |
| GACCAACCTGGAACTTATCA+AGG | 0.451416 | 8.4:-12861121 | None:intergenic |
| ATTAGAAAAGTACTCTCTCC+TGG | 0.453050 | 8.4:+12860303 | MS.gene060355:CDS |
| TTTCAAGTGTATCCTAGAAA+AGG | 0.454128 | 8.4:+12860504 | MS.gene060355:CDS |
| TCATCATTGTCATCTGGATG+TGG | 0.457020 | 8.4:-12860354 | None:intergenic |
| AGCCAGATGTGAAGAGAAAG+AGG | 0.457312 | 8.4:+12859719 | MS.gene060355:CDS |
| TTGCTGCTGTGGAGGCTGCT+GGG | 0.462725 | 8.4:-12859404 | None:intergenic |
| AGAAACAGGCGGAAAAGATA+AGG | 0.463240 | 8.4:+12860055 | MS.gene060355:CDS |
| GGAATGGATACAATATCTTC+AGG | 0.463682 | 8.4:-12860957 | None:intergenic |
| ATCCTAGAAAAGGTGAAACT+TGG | 0.463901 | 8.4:+12860514 | MS.gene060355:CDS |
| TATGGGCTCTATATAGGAAA+TGG | 0.465125 | 8.4:+12861438 | MS.gene060355:CDS |
| TACGTGGCTGCTCAGTTGAA+TGG | 0.465678 | 8.4:-12859843 | None:intergenic |
| CGCTACCGCCTTCATTCCTA+TGG | 0.471443 | 8.4:+12861729 | MS.gene060355:CDS |
| TACCAAGAAAAGAATTGCTT+AGG | 0.471905 | 8.4:+12861627 | MS.gene060355:CDS |
| TCCGCGGATGGAATTTGAAA+TGG | 0.472285 | 8.4:-12860720 | None:intergenic |
| AGATTCATTGGTAAAGATGC+AGG | 0.475164 | 8.4:-12860831 | None:intergenic |
| AAATCACTGAACTCTGCATC+AGG | 0.475285 | 8.4:-12860189 | None:intergenic |
| TGCTGACTTAGGTTAGTTGT+CGG | 0.476294 | 8.4:-12859598 | None:intergenic |
| GATGTCTTGGAGGTTGAACC+TGG | 0.478752 | 8.4:-12860141 | None:intergenic |
| GAAACAGGCGGAAAAGATAA+GGG | 0.480779 | 8.4:+12860056 | MS.gene060355:CDS |
| GTCGCCTGCAACCGAAATCC+AGG | 0.481395 | 8.4:-12860321 | None:intergenic |
| TATTTGGTGATGAGATCAAT+TGG | 0.481416 | 8.4:+12859083 | MS.gene060355:CDS |
| AAGCAATTTGACTGAGGTAA+AGG | 0.481518 | 8.4:+12860998 | MS.gene060355:CDS |
| GGTGTATATGTTGCATACTT+AGG | 0.482155 | 8.4:+12860642 | MS.gene060355:CDS |
| CATACTTCACGGAACAAAAT+GGG | 0.482705 | 8.4:-12859483 | None:intergenic |
| ACTATAGGGCATTCTTCTCC+AGG | 0.483908 | 8.4:+12860123 | MS.gene060355:CDS |
| ATTCCATCTTTCAAAATGAC+TGG | 0.486583 | 8.4:+12860765 | MS.gene060355:CDS |
| CAAAATTTGGATGTGAAGAC+TGG | 0.487397 | 8.4:+12860873 | MS.gene060355:CDS |
| TCTTCTGTTAATTTGAAAGC+TGG | 0.488195 | 8.4:-12861665 | None:intergenic |
| GTGGTGATGGTCAAAGTCAC+GGG | 0.489922 | 8.4:+12859971 | MS.gene060355:CDS |
| GCCAGAGAATACCACTAAAT+GGG | 0.492948 | 8.4:+12861262 | MS.gene060355:CDS |
| GGCTTCTGGGAACTTGATCC+GGG | 0.494405 | 8.4:+12861704 | MS.gene060355:CDS |
| TATCACATGGCACAAGGATG+TGG | 0.495255 | 8.4:+12860557 | MS.gene060355:CDS |
| TCTGTAGTACTCATACTTCA+CGG | 0.502954 | 8.4:-12859494 | None:intergenic |
| TCTGAAGATGAAATAGTTGC+TGG | 0.503371 | 8.4:+12859793 | MS.gene060355:CDS |
| TCAGCGTCTGTATCCTGTAT+TGG | 0.504823 | 8.4:+12859003 | MS.gene060355:CDS |
| GAAGTTGAAGAGCAAACTTT+CGG | 0.505614 | 8.4:-12859162 | None:intergenic |
| AGTTATTTAGATTCTCTCAC+AGG | 0.506241 | 8.4:+12860742 | MS.gene060355:CDS |
| ACAAGGATGTGGAATCTCAT+AGG | 0.506633 | 8.4:+12860568 | MS.gene060355:CDS |
| CAAGCTTCCAAGGCGAATGT+TGG | 0.509493 | 8.4:+12859619 | MS.gene060355:CDS |
| CGCACACCGTTCTGCTTCTG+TGG | 0.510203 | 8.4:-12859439 | None:intergenic |
| GGCAGGCAGTCCAGAAAGTA+CGG | 0.511002 | 8.4:-12859462 | None:intergenic |
| GGAAATCGCGGAAAAGAAGA+TGG | 0.515469 | 8.4:+12858937 | MS.gene060355:CDS |
| GTTCCAGGTTGGTCAAATAT+GGG | 0.517127 | 8.4:+12861130 | MS.gene060355:CDS |
| TTGAGATCCAACATTCGCCT+TGG | 0.517211 | 8.4:-12859626 | None:intergenic |
| ATCTTGTCAGATTATGTTGA+AGG | 0.517364 | 8.4:+12860615 | MS.gene060355:CDS |
| TCCTACAGTGGTAACATGAA+TGG | 0.518453 | 8.4:+12859892 | MS.gene060355:CDS |
| CCTAAGTCAGCAAGCTTCCA+AGG | 0.522304 | 8.4:+12859609 | MS.gene060355:CDS |
| GCCCATACTTCCCCTTTCCT+CGG | 0.522748 | 8.4:-12861422 | None:intergenic |
| GCTAAAACAAATGTTCAGAA+TGG | 0.523392 | 8.4:+12860000 | MS.gene060355:CDS |
| TGGAATTTCAAAAGCTTCTG+GGG | 0.523484 | 8.4:-12861063 | None:intergenic |
| TGACAATGATGAAATCAAAT+GGG | 0.524500 | 8.4:+12860365 | MS.gene060355:CDS |
| AATGAAGGCGGTAGCGCACC+CGG | 0.525968 | 8.4:-12861722 | None:intergenic |
| AATTCTTCAACTTTGAAACT+GGG | 0.529119 | 8.4:+12861093 | MS.gene060355:CDS |
| GTCAACTTTGACCTTGGGAA+TGG | 0.532499 | 8.4:-12860973 | None:intergenic |
| CGGATGGAATTTGAAATGGC+TGG | 0.532703 | 8.4:-12860716 | None:intergenic |
| TCCTAGAAAAGGTGAAACTT+GGG | 0.538485 | 8.4:+12860515 | MS.gene060355:CDS |
| ATCTACGGCCATAGGAATGA+AGG | 0.539230 | 8.4:-12861737 | None:intergenic |
| TTCGCTGTCAACAATGCCAC+AGG | 0.540523 | 8.4:+12859536 | MS.gene060355:CDS |
| CTGGTTATGTTCAAAAGGAA+TGG | 0.541977 | 8.4:+12860471 | MS.gene060355:CDS |
| AATGGATCGCATTGTGGTGA+TGG | 0.542255 | 8.4:+12859958 | MS.gene060355:CDS |
| AAGGCGAATGTTGGATCTCA+AGG | 0.543038 | 8.4:+12859628 | MS.gene060355:CDS |
| TGGACAATTTGATGTCTTGG+AGG | 0.543518 | 8.4:-12860151 | None:intergenic |
| CAAGCTTCATCTACGGCCAT+AGG | 0.544885 | 8.4:-12861745 | None:intergenic |
| GTTGAATGGTTTCCTACACC+TGG | 0.551615 | 8.4:-12859829 | None:intergenic |
| TTCAAAATGACTGGTCAGGA+AGG | 0.552335 | 8.4:+12860774 | MS.gene060355:CDS |
| TACACAATATATCCGAGGAA+AGG | 0.553299 | 8.4:+12861410 | MS.gene060355:CDS |
| AATGACTTTAAATCTGCCAC+AGG | 0.555303 | 8.4:-12861306 | None:intergenic |
| AATCTAAATAACTCCGCGGA+TGG | 0.555677 | 8.4:-12860732 | None:intergenic |
| CTTAAATGCAGCTTCTGCAC+CGG | 0.556529 | 8.4:-12859206 | None:intergenic |
| GTTGCAGAATTGAAATTCGT+AGG | 0.557930 | 8.4:-12859343 | None:intergenic |
| CTTCAGCTAGAACGCACAGC+TGG | 0.562229 | 8.4:+12859115 | MS.gene060355:CDS |
| GATTTCGGTTGCAGGCGACA+TGG | 0.564201 | 8.4:+12860325 | MS.gene060355:CDS |
| CAGGCGGAAAAGATAAGGGC+GGG | 0.564747 | 8.4:+12860060 | MS.gene060355:CDS |
| GGCGGAAAAGAAGCTGCAGA+AGG | 0.565487 | 8.4:+12860081 | MS.gene060355:CDS |
| GCATACTTAGGTAAATTGAA+AGG | 0.567041 | 8.4:+12860654 | MS.gene060355:CDS |
| ATGCCCATATTTGACCAACC+TGG | 0.567557 | 8.4:-12861133 | None:intergenic |
| GGTGATGAGATCAATTGGTA+TGG | 0.569620 | 8.4:+12859088 | MS.gene060355:CDS |
| ACACCGTTCTGCTTCTGTGG+AGG | 0.569901 | 8.4:-12859436 | None:intergenic |
| TCCGAGGAAAGGGGAAGTAT+GGG | 0.575769 | 8.4:+12861421 | MS.gene060355:CDS |
| GCCATTCATGTTACCACTGT+AGG | 0.576972 | 8.4:-12859893 | None:intergenic |
| CTGGGGTTGAAGCTGAAGCA+TGG | 0.578926 | 8.4:-12861046 | None:intergenic |
| GAGGAATTGCCTGTTGCTTG+TGG | 0.579103 | 8.4:+12860393 | MS.gene060355:CDS |
| AGGAATTGCCTGTTGCTTGT+GGG | 0.579399 | 8.4:+12860394 | MS.gene060355:CDS |
| TGTGGTGATGGTCAAAGTCA+CGG | 0.579948 | 8.4:+12859970 | MS.gene060355:CDS |
| GCCATTTCAAATTCCATCCG+CGG | 0.580980 | 8.4:+12860719 | MS.gene060355:CDS |
| TAGATAGCCCAAATCTGCCC+AGG | 0.582130 | 8.4:-12860243 | None:intergenic |
| GAAGAGAAAGAGGAATCAAG+TGG | 0.584743 | 8.4:+12859729 | MS.gene060355:CDS |
| TCAGATTATGTTGAAGGTGA+GGG | 0.586691 | 8.4:+12860621 | MS.gene060355:CDS |
| TGAAATCAAATGGGTAGATG+AGG | 0.587072 | 8.4:+12860374 | MS.gene060355:CDS |
| TGCAGAAGGGTCAAAGCAGA+TGG | 0.591572 | 8.4:+12860095 | MS.gene060355:CDS |
| AGAAGAGGCCTTAAGGGCCA+AGG | 0.591580 | 8.4:+12858916 | MS.gene060355:CDS |
| TCCCTTGATAAGTTCCAGGT+TGG | 0.591813 | 8.4:+12861119 | MS.gene060355:CDS |
| AAATTGGGAGTATGACATAG+TGG | 0.594293 | 8.4:+12861490 | MS.gene060355:CDS |
| CTTGATGTGAAATACAAGAC+AGG | 0.594593 | 8.4:-12861361 | None:intergenic |
| GTCAGATTATGTTGAAGGTG+AGG | 0.594624 | 8.4:+12860620 | MS.gene060355:CDS |
| CATGTGGCAGCGAGAATGCA+AGG | 0.597624 | 8.4:+12860904 | MS.gene060355:CDS |
| CTTCACGGAACAAAATGGGC+AGG | 0.601898 | 8.4:-12859479 | None:intergenic |
| ATATCTTCAGGTGACATCGA+GGG | 0.603192 | 8.4:-12860945 | None:intergenic |
| ATGACTGGTCAGGAAGGAGT+AGG | 0.617615 | 8.4:+12860780 | MS.gene060355:CDS |
| GCATATATTCTGGATATGCA+AGG | 0.618086 | 8.4:+12859568 | MS.gene060355:CDS |
| TTCAAATTAACAGAAGAGCA+TGG | 0.619190 | 8.4:+12861671 | MS.gene060355:CDS |
| TCTTCAACTTTGAAACTGGG+AGG | 0.619814 | 8.4:+12861096 | MS.gene060355:CDS |
| GGAAAAGAAGATGGAAAACA+GGG | 0.622965 | 8.4:+12858946 | MS.gene060355:CDS |
| ACCAACCTGGAACTTATCAA+GGG | 0.626111 | 8.4:-12861120 | None:intergenic |
| TTGGGATATCACATGGCACA+AGG | 0.627522 | 8.4:+12860551 | MS.gene060355:CDS |
| CAGGAGAATGGATCGCATTG+TGG | 0.629349 | 8.4:+12859952 | MS.gene060355:CDS |
| GCCGCGTTCTAATCAACCGA+AGG | 0.634836 | 8.4:+12859318 | MS.gene060355:CDS |
| GATGGACTGCAACAAAGAAG+AGG | 0.636608 | 8.4:+12858901 | None:intergenic |
| GACGGCATGCTTACTTCCTG+TGG | 0.639825 | 8.4:+12861290 | MS.gene060355:CDS |
| GCGGAAAAGAAGCTGCAGAA+GGG | 0.641309 | 8.4:+12860082 | MS.gene060355:CDS |
| CAGCCTCCACAGAAGCAGAA+CGG | 0.649089 | 8.4:+12859433 | MS.gene060355:CDS |
| CACAATATATCCGAGGAAAG+GGG | 0.650102 | 8.4:+12861412 | MS.gene060355:CDS |
| ACCACTAAATGGGAAGATGA+CGG | 0.650889 | 8.4:+12861272 | MS.gene060355:CDS |
| AGATATTGTATCCATTCCCA+AGG | 0.655279 | 8.4:+12860962 | MS.gene060355:CDS |
| AGAATTACACAATATATCCG+AGG | 0.655714 | 8.4:+12861405 | MS.gene060355:CDS |
| GATACACTTGAAAAGTATTG+CGG | 0.655980 | 8.4:-12860494 | None:intergenic |
| AAGCATAATGTTTCCTACAG+TGG | 0.656778 | 8.4:+12859880 | MS.gene060355:CDS |
| GAAGAGCATGGCGATCTGAG+AGG | 0.659805 | 8.4:+12861683 | MS.gene060355:CDS |
| CTTAAGGGCCAAGGAAATCG+CGG | 0.663767 | 8.4:+12858925 | MS.gene060355:CDS |
| TATATGCAACGAAGAGCCTG+TGG | 0.666516 | 8.4:-12859552 | None:intergenic |
| AATATCTTCAGGTGACATCG+AGG | 0.673364 | 8.4:-12860946 | None:intergenic |
| GCGGAAAAGATAAGGGCGGG+CGG | 0.673541 | 8.4:+12860063 | MS.gene060355:CDS |
| ACAGGCGGAAAAGATAAGGG+CGG | 0.682652 | 8.4:+12860059 | MS.gene060355:CDS |
| TGACACAAGCAATTTGACTG+AGG | 0.687076 | 8.4:+12860992 | MS.gene060355:CDS |
| AAGACTGGACATAGTTCATG+TGG | 0.699557 | 8.4:+12860888 | MS.gene060355:CDS |
| TTCTGTCGCACAGATCTACG+TGG | 0.702997 | 8.4:-12859859 | None:intergenic |
| TTCGGTTGATTAGAACGCGG+CGG | 0.704532 | 8.4:-12859316 | None:intergenic |
| TACGGCCATAGGAATGAAGG+CGG | 0.709541 | 8.4:-12861734 | None:intergenic |
| GCTTTCTAGAGACACCAACA+GGG | 0.718156 | 8.4:-12859699 | None:intergenic |
| AGAGAATCTAAATAACTCCG+CGG | 0.721532 | 8.4:-12860736 | None:intergenic |
| ACAGGTAAAACAGAAACAGG+CGG | 0.729088 | 8.4:+12860044 | MS.gene060355:CDS |
| TGGTGATGGTCAAAGTCACG+GGG | 0.730220 | 8.4:+12859972 | MS.gene060355:CDS |
| ACCTTCGGTTGATTAGAACG+CGG | 0.736088 | 8.4:-12859319 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATGACAATGATGAAATCAAA+TGG | + | chr8.4:12860364-12860383 | MS.gene060355:CDS | 25.0% |
| ! | CTATTGAATTGCATGTTTAT+TGG | + | chr8.4:12861222-12861241 | MS.gene060355:CDS | 25.0% |
| ! | TAAACATGCAATTCAATAGT+AGG | - | chr8.4:12861221-12861240 | None:intergenic | 25.0% |
| ! | TGACAATGATGAAATCAAAT+GGG | + | chr8.4:12860365-12860384 | MS.gene060355:CDS | 25.0% |
| ! | TTAATCTGACCATAGTATTT+CGG | - | chr8.4:12861182-12861201 | None:intergenic | 25.0% |
| !! | TTAATTTGAAAGCTGGAATT+TGG | - | chr8.4:12861661-12861680 | None:intergenic | 25.0% |
| !!! | AATTCTTCAACTTTGAAACT+GGG | + | chr8.4:12861093-12861112 | MS.gene060355:CDS | 25.0% |
| AAGCAGATGGATAAAACTAT+AGG | + | chr8.4:12860108-12860127 | MS.gene060355:CDS | 30.0% | |
| ACAAAGCCTTTCAAGAAAAA+AGG | + | chr8.4:12859676-12859695 | MS.gene060355:CDS | 30.0% | |
| ACTTATTACGACCTTCAAAA+AGG | + | chr8.4:12859926-12859945 | MS.gene060355:CDS | 30.0% | |
| AGAATTACACAATATATCCG+AGG | + | chr8.4:12861405-12861424 | MS.gene060355:CDS | 30.0% | |
| AGCAGATGGATAAAACTATA+GGG | + | chr8.4:12860109-12860128 | MS.gene060355:CDS | 30.0% | |
| AGTGTTCTGACCTTAAAAAT+TGG | + | chr8.4:12861474-12861493 | MS.gene060355:CDS | 30.0% | |
| AGTTATTTAGATTCTCTCAC+AGG | + | chr8.4:12860742-12860761 | MS.gene060355:CDS | 30.0% | |
| ATCTTGTCAGATTATGTTGA+AGG | + | chr8.4:12860615-12860634 | MS.gene060355:CDS | 30.0% | |
| ATTCCATCTTTCAAAATGAC+TGG | + | chr8.4:12860765-12860784 | MS.gene060355:CDS | 30.0% | |
| ATTGTGTAATTCTTGCCAAT+AGG | - | chr8.4:12861398-12861417 | None:intergenic | 30.0% | |
| ATTTGGACAATTTGATGTCT+TGG | - | chr8.4:12860157-12860176 | None:intergenic | 30.0% | |
| CTAATTAACGCATAGAATCT+AGG | - | chr8.4:12860288-12860307 | None:intergenic | 30.0% | |
| CTTATTACGACCTTCAAAAA+GGG | + | chr8.4:12859927-12859946 | MS.gene060355:CDS | 30.0% | |
| GCATACTTAGGTAAATTGAA+AGG | + | chr8.4:12860654-12860673 | MS.gene060355:CDS | 30.0% | |
| GCTAAAACAAATGTTCAGAA+TGG | + | chr8.4:12860000-12860019 | MS.gene060355:CDS | 30.0% | |
| GTGTTCTGACCTTAAAAATT+GGG | + | chr8.4:12861475-12861494 | MS.gene060355:CDS | 30.0% | |
| GTTTATAGAGACTTCAATCT+TGG | + | chr8.4:12861535-12861554 | MS.gene060355:CDS | 30.0% | |
| TACCAAGAAAAGAATTGCTT+AGG | + | chr8.4:12861627-12861646 | MS.gene060355:CDS | 30.0% | |
| TCAAAAATTGGGATATCACA+TGG | + | chr8.4:12860544-12860563 | MS.gene060355:CDS | 30.0% | |
| TCAGGATAAACATAAGCATT+TGG | - | chr8.4:12860174-12860193 | None:intergenic | 30.0% | |
| TTATTACGACCTTCAAAAAG+GGG | + | chr8.4:12859928-12859947 | MS.gene060355:CDS | 30.0% | |
| TTCAAATTAACAGAAGAGCA+TGG | + | chr8.4:12861671-12861690 | MS.gene060355:CDS | 30.0% | |
| TTGATTTCATCATTGTCATC+TGG | - | chr8.4:12860363-12860382 | None:intergenic | 30.0% | |
| ! | AAAAAAGAAAGTTTTGCACC+TGG | + | chr8.4:12860225-12860244 | MS.gene060355:CDS | 30.0% |
| ! | AAAAAGAAAGTTTTGCACCT+GGG | + | chr8.4:12860226-12860245 | MS.gene060355:CDS | 30.0% |
| ! | AAAGGATTCTCTTGATGATA+TGG | + | chr8.4:12861016-12861035 | MS.gene060355:CDS | 30.0% |
| ! | AACCTAAGCAATTCTTTTCT+TGG | - | chr8.4:12861632-12861651 | None:intergenic | 30.0% |
| ! | GATTGCTGTTACTCAAAATT+TGG | + | chr8.4:12860860-12860879 | MS.gene060355:CDS | 30.0% |
| ! | GTGTTCGAGTTTGTAAAATT+GGG | - | chr8.4:12859385-12859404 | None:intergenic | 30.0% |
| ! | TCTTCTGTTAATTTGAAAGC+TGG | - | chr8.4:12861668-12861687 | None:intergenic | 30.0% |
| ! | TGAGCTATATTTTCCAATAC+AGG | - | chr8.4:12859019-12859038 | None:intergenic | 30.0% |
| ! | TGTCATACTCCCAATTTTTA+AGG | - | chr8.4:12861487-12861506 | None:intergenic | 30.0% |
| ! | TGTTTTACCTGTTCATCTTT+TGG | - | chr8.4:12860036-12860055 | None:intergenic | 30.0% |
| ! | TTGGGCTCTTTTCAAAAATT+GGG | + | chr8.4:12860533-12860552 | MS.gene060355:CDS | 30.0% |
| ! | TTTCAAGTGTATCCTAGAAA+AGG | + | chr8.4:12860504-12860523 | MS.gene060355:CDS | 30.0% |
| ! | TTTCTTGAAAGGCTTTGTAT+TGG | - | chr8.4:12859674-12859693 | None:intergenic | 30.0% |
| !! | CAATTCTTCAACTTTGAAAC+TGG | + | chr8.4:12861092-12861111 | MS.gene060355:CDS | 30.0% |
| !! | GATACACTTGAAAAGTATTG+CGG | - | chr8.4:12860497-12860516 | None:intergenic | 30.0% |
| !! | TATTTGGTGATGAGATCAAT+TGG | + | chr8.4:12859083-12859102 | MS.gene060355:CDS | 30.0% |
| !!! | TGGTTTTAGTTCTGTTTTCA+GGG | + | chr8.4:12861568-12861587 | MS.gene060355:CDS | 30.0% |
| AAGCAATTTGACTGAGGTAA+AGG | + | chr8.4:12860998-12861017 | MS.gene060355:CDS | 35.0% | |
| AAGCATAATGTTTCCTACAG+TGG | + | chr8.4:12859880-12859899 | MS.gene060355:CDS | 35.0% | |
| AAGTCAATAGAAGGTTCTTC+AGG | + | chr8.4:12861593-12861612 | MS.gene060355:CDS | 35.0% | |
| AAGTTGAAGAATTGAGCATC+TGG | - | chr8.4:12861086-12861105 | None:intergenic | 35.0% | |
| AATGACTTTAAATCTGCCAC+AGG | - | chr8.4:12861309-12861328 | None:intergenic | 35.0% | |
| ACACAATATATCCGAGGAAA+GGG | + | chr8.4:12861411-12861430 | MS.gene060355:CDS | 35.0% | |
| AGAGAATCTAAATAACTCCG+CGG | - | chr8.4:12860739-12860758 | None:intergenic | 35.0% | |
| AGATATTGTATCCATTCCCA+AGG | + | chr8.4:12860962-12860981 | MS.gene060355:CDS | 35.0% | |
| AGATTCATTGGTAAAGATGC+AGG | - | chr8.4:12860834-12860853 | None:intergenic | 35.0% | |
| ATCCTAGAAAAGGTGAAACT+TGG | + | chr8.4:12860514-12860533 | MS.gene060355:CDS | 35.0% | |
| CAAAATTTGGATGTGAAGAC+TGG | + | chr8.4:12860873-12860892 | MS.gene060355:CDS | 35.0% | |
| CATACTTCACGGAACAAAAT+GGG | - | chr8.4:12859486-12859505 | None:intergenic | 35.0% | |
| CTCATCTGGTTATGTTCAAA+AGG | + | chr8.4:12860466-12860485 | MS.gene060355:CDS | 35.0% | |
| CTGGAATTTCAAAAGCTTCT+GGG | - | chr8.4:12861067-12861086 | None:intergenic | 35.0% | |
| CTGGTTATGTTCAAAAGGAA+TGG | + | chr8.4:12860471-12860490 | MS.gene060355:CDS | 35.0% | |
| CTTGATGTGAAATACAAGAC+AGG | - | chr8.4:12861364-12861383 | None:intergenic | 35.0% | |
| GAAATAGTTGCTGGTAAGAA+TGG | + | chr8.4:12859802-12859821 | MS.gene060355:CDS | 35.0% | |
| GAAGTTGAAGAGCAAACTTT+CGG | - | chr8.4:12859165-12859184 | None:intergenic | 35.0% | |
| GCAATCTCTTCAAGATTCAT+TGG | - | chr8.4:12860846-12860865 | None:intergenic | 35.0% | |
| GCATATATTCTGGATATGCA+AGG | + | chr8.4:12859568-12859587 | MS.gene060355:CDS | 35.0% | |
| GCTATCTACGATTCAATAGA+TGG | + | chr8.4:12860258-12860277 | MS.gene060355:CDS | 35.0% | |
| GGAAAAGAAGATGGAAAACA+GGG | + | chr8.4:12858946-12858965 | MS.gene060355:CDS | 35.0% | |
| GGAATGGATACAATATCTTC+AGG | - | chr8.4:12860960-12860979 | None:intergenic | 35.0% | |
| GGTGTATATGTTGCATACTT+AGG | + | chr8.4:12860642-12860661 | MS.gene060355:CDS | 35.0% | |
| GTTGCAGAATTGAAATTCGT+AGG | - | chr8.4:12859346-12859365 | None:intergenic | 35.0% | |
| TACACAATATATCCGAGGAA+AGG | + | chr8.4:12861410-12861429 | MS.gene060355:CDS | 35.0% | |
| TATGGGCTCTATATAGGAAA+TGG | + | chr8.4:12861438-12861457 | MS.gene060355:CDS | 35.0% | |
| TCAGATTATGTTGAAGGTGA+GGG | + | chr8.4:12860621-12860640 | MS.gene060355:CDS | 35.0% | |
| TCATACTTCACGGAACAAAA+TGG | - | chr8.4:12859487-12859506 | None:intergenic | 35.0% | |
| TCCTAGAAAAGGTGAAACTT+GGG | + | chr8.4:12860515-12860534 | MS.gene060355:CDS | 35.0% | |
| TCTGAAGATGAAATAGTTGC+TGG | + | chr8.4:12859793-12859812 | MS.gene060355:CDS | 35.0% | |
| TCTGTAGTACTCATACTTCA+CGG | - | chr8.4:12859497-12859516 | None:intergenic | 35.0% | |
| TGAAATCAAATGGGTAGATG+AGG | + | chr8.4:12860374-12860393 | MS.gene060355:CDS | 35.0% | |
| TGAACAGGTAAAACAGAAAC+AGG | + | chr8.4:12860041-12860060 | MS.gene060355:CDS | 35.0% | |
| TGGAATTTCAAAAGCTTCTG+GGG | - | chr8.4:12861066-12861085 | None:intergenic | 35.0% | |
| TTAAATTTCCCACAAGCAAC+AGG | - | chr8.4:12860405-12860424 | None:intergenic | 35.0% | |
| TTGAAATTCGTAGGAACCTT+CGG | - | chr8.4:12859337-12859356 | None:intergenic | 35.0% | |
| ! | AAATTGGGAGTATGACATAG+TGG | + | chr8.4:12861490-12861509 | MS.gene060355:CDS | 35.0% |
| ! | ATCTTTCAAAATGACTGGTC+AGG | + | chr8.4:12860770-12860789 | MS.gene060355:CDS | 35.0% |
| ! | CTTGGGCTCTTTTCAAAAAT+TGG | + | chr8.4:12860532-12860551 | MS.gene060355:CDS | 35.0% |
| ! | GGTGTTCGAGTTTGTAAAAT+TGG | - | chr8.4:12859386-12859405 | None:intergenic | 35.0% |
| ! | TCTGGAATTTCAAAAGCTTC+TGG | - | chr8.4:12861068-12861087 | None:intergenic | 35.0% |
| !! | AGAGTTCAGTGATTTTGACA+AGG | + | chr8.4:12860197-12860216 | MS.gene060355:CDS | 35.0% |
| !! | ATTAGAAAAGTACTCTCTCC+TGG | + | chr8.4:12860303-12860322 | MS.gene060355:CDS | 35.0% |
| !! | TGACCAGTCATTTTGAAAGA+TGG | - | chr8.4:12860771-12860790 | None:intergenic | 35.0% |
| !!! | ACCGGCAAACTTGTTTTTAT+CGG | - | chr8.4:12859191-12859210 | None:intergenic | 35.0% |
| !!! | CTGGTTTTAGTTCTGTTTTC+AGG | + | chr8.4:12861567-12861586 | MS.gene060355:CDS | 35.0% |
| !!! | GGTTTTAGTTCTGTTTTCAG+GGG | + | chr8.4:12861569-12861588 | MS.gene060355:CDS | 35.0% |
| AAATCACTGAACTCTGCATC+AGG | - | chr8.4:12860192-12860211 | None:intergenic | 40.0% | |
| AAGACTGGACATAGTTCATG+TGG | + | chr8.4:12860888-12860907 | MS.gene060355:CDS | 40.0% | |
| AAGGAGTAGGCGTTCATTTA+GGG | + | chr8.4:12860793-12860812 | MS.gene060355:CDS | 40.0% | |
| AAGTACTCTCTCCTGGATTT+CGG | + | chr8.4:12860310-12860329 | MS.gene060355:CDS | 40.0% | |
| AATATCTTCAGGTGACATCG+AGG | - | chr8.4:12860949-12860968 | None:intergenic | 40.0% | |
| AATCTAAATAACTCCGCGGA+TGG | - | chr8.4:12860735-12860754 | None:intergenic | 40.0% | |
| ACAAGGATGTGGAATCTCAT+AGG | + | chr8.4:12860568-12860587 | MS.gene060355:CDS | 40.0% | |
| ACAGGTAAAACAGAAACAGG+CGG | + | chr8.4:12860044-12860063 | MS.gene060355:CDS | 40.0% | |
| ACCAACCTGGAACTTATCAA+GGG | - | chr8.4:12861123-12861142 | None:intergenic | 40.0% | |
| ACCACTAAATGGGAAGATGA+CGG | + | chr8.4:12861272-12861291 | MS.gene060355:CDS | 40.0% | |
| AGAAACAGGCGGAAAAGATA+AGG | + | chr8.4:12860055-12860074 | MS.gene060355:CDS | 40.0% | |
| AGCTGATCCAAAAGATGAAC+AGG | + | chr8.4:12860026-12860045 | MS.gene060355:CDS | 40.0% | |
| ATATCTTCAGGTGACATCGA+GGG | - | chr8.4:12860948-12860967 | None:intergenic | 40.0% | |
| CAACAAAGAAGAGGCCTTAA+GGG | + | chr8.4:12858910-12858929 | MS.gene060355:CDS | 40.0% | |
| CAAGTACAAGCTGATCCTAT+TGG | + | chr8.4:12861380-12861399 | MS.gene060355:CDS | 40.0% | |
| CACAATATATCCGAGGAAAG+GGG | + | chr8.4:12861412-12861431 | MS.gene060355:CDS | 40.0% | |
| CAGACAGAGAAAAACGAACT+AGG | + | chr8.4:12859257-12859276 | MS.gene060355:CDS | 40.0% | |
| CCCGATAAAAACAAGTTTGC+CGG | + | chr8.4:12859187-12859206 | MS.gene060355:CDS | 40.0% | |
| CGGAAAAGAAGATGGAAAAC+AGG | + | chr8.4:12858945-12858964 | MS.gene060355:CDS | 40.0% | |
| CTGCAACGAAAAACAATGTC+AGG | + | chr8.4:12859359-12859378 | MS.gene060355:CDS | 40.0% | |
| CTTGTGTCAACTTTGACCTT+GGG | - | chr8.4:12860981-12861000 | None:intergenic | 40.0% | |
| GAAACAGGCGGAAAAGATAA+GGG | + | chr8.4:12860056-12860075 | MS.gene060355:CDS | 40.0% | |
| GAAGAGAAAGAGGAATCAAG+TGG | + | chr8.4:12859729-12859748 | MS.gene060355:CDS | 40.0% | |
| GAAGCTGCATTTAAGCTGAT+TGG | + | chr8.4:12859214-12859233 | MS.gene060355:CDS | 40.0% | |
| GATGGAATGCCGAAATACTA+TGG | + | chr8.4:12861170-12861189 | MS.gene060355:CDS | 40.0% | |
| GCCAGAGAATACCACTAAAT+GGG | + | chr8.4:12861262-12861281 | MS.gene060355:CDS | 40.0% | |
| GCTCTTCGTTGCATATATTC+TGG | + | chr8.4:12859558-12859577 | MS.gene060355:CDS | 40.0% | |
| GGTGATGAGATCAATTGGTA+TGG | + | chr8.4:12859088-12859107 | MS.gene060355:CDS | 40.0% | |
| GTCAGATTATGTTGAAGGTG+AGG | + | chr8.4:12860620-12860639 | MS.gene060355:CDS | 40.0% | |
| TCAATCTTGGAGCATGTTAC+TGG | + | chr8.4:12861548-12861567 | MS.gene060355:CDS | 40.0% | |
| TCATCATTGTCATCTGGATG+TGG | - | chr8.4:12860357-12860376 | None:intergenic | 40.0% | |
| TCCCATTTAGTGGTATTCTC+TGG | - | chr8.4:12861266-12861285 | None:intergenic | 40.0% | |
| TCCTACAGTGGTAACATGAA+TGG | + | chr8.4:12859892-12859911 | MS.gene060355:CDS | 40.0% | |
| TGACACAAGCAATTTGACTG+AGG | + | chr8.4:12860992-12861011 | MS.gene060355:CDS | 40.0% | |
| TGCCAGAGAATACCACTAAA+TGG | + | chr8.4:12861261-12861280 | MS.gene060355:CDS | 40.0% | |
| TGGACAATTTGATGTCTTGG+AGG | - | chr8.4:12860154-12860173 | None:intergenic | 40.0% | |
| TTCAAGAAAAAAGGCCCTGT+TGG | + | chr8.4:12859685-12859704 | MS.gene060355:CDS | 40.0% | |
| TTCAGGGGAAAGTCAATAGA+AGG | + | chr8.4:12861584-12861603 | MS.gene060355:CDS | 40.0% | |
| TTCCTCTTTCTCTTCACATC+TGG | - | chr8.4:12859724-12859743 | None:intergenic | 40.0% | |
| ! | AAGAATGGTTTTCCAGGTGT+AGG | + | chr8.4:12859817-12859836 | MS.gene060355:CDS | 40.0% |
| ! | ATGGAAAACAGGGATTTTGC+AGG | + | chr8.4:12858956-12858975 | MS.gene060355:CDS | 40.0% |
| ! | ATGGGCATTTTACAGTGATG+AGG | + | chr8.4:12861148-12861167 | MS.gene060355:CDS | 40.0% |
| ! | GCATTTTACAGTGATGAGGA+TGG | + | chr8.4:12861152-12861171 | MS.gene060355:CDS | 40.0% |
| ! | GGCTCGTAAATTTGCTCTTA+AGG | + | chr8.4:12858979-12858998 | MS.gene060355:CDS | 40.0% |
| ! | TCATCTGACGTTTTCTCATC+TGG | + | chr8.4:12860452-12860471 | MS.gene060355:CDS | 40.0% |
| ! | TGGAAAACAGGGATTTTGCA+GGG | + | chr8.4:12858957-12858976 | MS.gene060355:CDS | 40.0% |
| ! | TTCAAAATGACTGGTCAGGA+AGG | + | chr8.4:12860774-12860793 | MS.gene060355:CDS | 40.0% |
| !! | AGTTCCAGGTTGGTCAAATA+TGG | + | chr8.4:12861129-12861148 | MS.gene060355:CDS | 40.0% |
| !! | GTTCCAGGTTGGTCAAATAT+GGG | + | chr8.4:12861130-12861149 | MS.gene060355:CDS | 40.0% |
| !! | TCAGTGATTTTGACAAGGAC+AGG | + | chr8.4:12860202-12860221 | MS.gene060355:CDS | 40.0% |
| !! | TCTGCTGAGCAGAAAGTATT+TGG | + | chr8.4:12859067-12859086 | MS.gene060355:CDS | 40.0% |
| !! | TCTTCAACTTTGAAACTGGG+AGG | + | chr8.4:12861096-12861115 | MS.gene060355:CDS | 40.0% |
| !! | TGCTGACTTAGGTTAGTTGT+CGG | - | chr8.4:12859601-12859620 | None:intergenic | 40.0% |
| !!! | ACAGGGCCTTTTTTCTTGAA+AGG | - | chr8.4:12859685-12859704 | None:intergenic | 40.0% |
| !!! | CCGGCAAACTTGTTTTTATC+GGG | - | chr8.4:12859190-12859209 | None:intergenic | 40.0% |
| AAGGCGAATGTTGGATCTCA+AGG | + | chr8.4:12859628-12859647 | MS.gene060355:CDS | 45.0% | |
| AATGGATCGCATTGTGGTGA+TGG | + | chr8.4:12859958-12859977 | MS.gene060355:CDS | 45.0% | |
| ACCTTCGGTTGATTAGAACG+CGG | - | chr8.4:12859322-12859341 | None:intergenic | 45.0% | |
| AGCCAGATGTGAAGAGAAAG+AGG | + | chr8.4:12859719-12859738 | MS.gene060355:CDS | 45.0% | |
| ATGCCCATATTTGACCAACC+TGG | - | chr8.4:12861136-12861155 | None:intergenic | 45.0% | |
| CTTAAATGCAGCTTCTGCAC+CGG | - | chr8.4:12859209-12859228 | None:intergenic | 45.0% | |
| GAAGGAGTAGGCGTTCATTT+AGG | + | chr8.4:12860792-12860811 | MS.gene060355:CDS | 45.0% | |
| GACCAACCTGGAACTTATCA+AGG | - | chr8.4:12861124-12861143 | None:intergenic | 45.0% | |
| GCAACAAAGAAGAGGCCTTA+AGG | + | chr8.4:12858909-12858928 | MS.gene060355:CDS | 45.0% | |
| GCCATTCATGTTACCACTGT+AGG | - | chr8.4:12859896-12859915 | None:intergenic | 45.0% | |
| GCCATTTCAAATTCCATCCG+CGG | + | chr8.4:12860719-12860738 | MS.gene060355:CDS | 45.0% | |
| GCTTGTGTCAACTTTGACCT+TGG | - | chr8.4:12860982-12861001 | None:intergenic | 45.0% | |
| GGAAATCGCGGAAAAGAAGA+TGG | + | chr8.4:12858937-12858956 | MS.gene060355:CDS | 45.0% | |
| GTCAACTTTGACCTTGGGAA+TGG | - | chr8.4:12860976-12860995 | None:intergenic | 45.0% | |
| GTTGAATGGTTTCCTACACC+TGG | - | chr8.4:12859832-12859851 | None:intergenic | 45.0% | |
| TATATGCAACGAAGAGCCTG+TGG | - | chr8.4:12859555-12859574 | None:intergenic | 45.0% | |
| TATCACATGGCACAAGGATG+TGG | + | chr8.4:12860557-12860576 | MS.gene060355:CDS | 45.0% | |
| TCAAAAAGGGGTCAGGAGAA+TGG | + | chr8.4:12859940-12859959 | MS.gene060355:CDS | 45.0% | |
| TCAGCGTCTGTATCCTGTAT+TGG | + | chr8.4:12859003-12859022 | MS.gene060355:CDS | 45.0% | |
| TCCCTTGATAAGTTCCAGGT+TGG | + | chr8.4:12861119-12861138 | MS.gene060355:CDS | 45.0% | |
| TCCGCGGATGGAATTTGAAA+TGG | - | chr8.4:12860723-12860742 | None:intergenic | 45.0% | |
| TTGAGATCCAACATTCGCCT+TGG | - | chr8.4:12859629-12859648 | None:intergenic | 45.0% | |
| TTGGGATATCACATGGCACA+AGG | + | chr8.4:12860551-12860570 | MS.gene060355:CDS | 45.0% | |
| ! | ACTATAGGGCATTCTTCTCC+AGG | + | chr8.4:12860123-12860142 | MS.gene060355:CDS | 45.0% |
| ! | AGGAATTGCCTGTTGCTTGT+GGG | + | chr8.4:12860394-12860413 | MS.gene060355:CDS | 45.0% |
| ! | CGGATGGAATTTGAAATGGC+TGG | - | chr8.4:12860719-12860738 | None:intergenic | 45.0% |
| ! | CTTCTTTTCCGCGATTTCCT+TGG | - | chr8.4:12858936-12858955 | None:intergenic | 45.0% |
| ! | GCCCAAGTTTCACCTTTTCT+AGG | - | chr8.4:12860519-12860538 | None:intergenic | 45.0% |
| ! | GCTGGTAAGAATGGTTTTCC+AGG | + | chr8.4:12859811-12859830 | MS.gene060355:CDS | 45.0% |
| ! | GCTTTCTAGAGACACCAACA+GGG | - | chr8.4:12859702-12859721 | None:intergenic | 45.0% |
| ! | GGAAAACAGGGATTTTGCAG+GGG | + | chr8.4:12858958-12858977 | MS.gene060355:CDS | 45.0% |
| ! | GGGAAGTATGGGCTCTATAT+AGG | + | chr8.4:12861432-12861451 | MS.gene060355:CDS | 45.0% |
| ! | TTCTCCTGACCCCTTTTTGA+AGG | - | chr8.4:12859940-12859959 | None:intergenic | 45.0% |
| ! | TTTTGCACCTGGGCAGATTT+GGG | + | chr8.4:12860236-12860255 | MS.gene060355:CDS | 45.0% |
| !! | TGTGGTGATGGTCAAAGTCA+CGG | + | chr8.4:12859970-12859989 | MS.gene060355:CDS | 45.0% |
| !! | TTTATTGGCTTGCTTGCTGC+TGG | + | chr8.4:12861237-12861256 | MS.gene060355:CDS | 45.0% |
| !!! | TGCTTATTTTGCTGCTGTGG+AGG | - | chr8.4:12859415-12859434 | None:intergenic | 45.0% |
| ACAGGCGGAAAAGATAAGGG+CGG | + | chr8.4:12860059-12860078 | MS.gene060355:CDS | 50.0% | |
| ACGACCTTCAAAAAGGGGTC+AGG | + | chr8.4:12859933-12859952 | MS.gene060355:CDS | 50.0% | |
| ATCCGAGGAAAGGGGAAGTA+TGG | + | chr8.4:12861420-12861439 | MS.gene060355:CDS | 50.0% | |
| CAAGCTTCCAAGGCGAATGT+TGG | + | chr8.4:12859619-12859638 | MS.gene060355:CDS | 50.0% | |
| CAGGAGAATGGATCGCATTG+TGG | + | chr8.4:12859952-12859971 | MS.gene060355:CDS | 50.0% | |
| CCTAAGTCAGCAAGCTTCCA+AGG | + | chr8.4:12859609-12859628 | MS.gene060355:CDS | 50.0% | |
| CTTAAGGGCCAAGGAAATCG+CGG | + | chr8.4:12858925-12858944 | MS.gene060355:CDS | 50.0% | |
| CTTCACGGAACAAAATGGGC+AGG | - | chr8.4:12859482-12859501 | None:intergenic | 50.0% | |
| GAGGTCCCTTGATAAGTTCC+AGG | + | chr8.4:12861115-12861134 | MS.gene060355:CDS | 50.0% | |
| GATGTCTTGGAGGTTGAACC+TGG | - | chr8.4:12860144-12860163 | None:intergenic | 50.0% | |
| GCCGTCATCTTCCCATTTAG+TGG | - | chr8.4:12861276-12861295 | None:intergenic | 50.0% | |
| GCGGAAAAGAAGCTGCAGAA+GGG | + | chr8.4:12860082-12860101 | MS.gene060355:CDS | 50.0% | |
| TACGGCCATAGGAATGAAGG+CGG | - | chr8.4:12861737-12861756 | None:intergenic | 50.0% | |
| TACGTGGCTGCTCAGTTGAA+TGG | - | chr8.4:12859846-12859865 | None:intergenic | 50.0% | |
| TAGATAGCCCAAATCTGCCC+AGG | - | chr8.4:12860246-12860265 | None:intergenic | 50.0% | |
| TGCAGAAGGGTCAAAGCAGA+TGG | + | chr8.4:12860095-12860114 | MS.gene060355:CDS | 50.0% | |
| TTCGCTGTCAACAATGCCAC+AGG | + | chr8.4:12859536-12859555 | MS.gene060355:CDS | 50.0% | |
| TTCGGTTGATTAGAACGCGG+CGG | - | chr8.4:12859319-12859338 | None:intergenic | 50.0% | |
| TTCTGTCGCACAGATCTACG+TGG | - | chr8.4:12859862-12859881 | None:intergenic | 50.0% | |
| ! | AGGCTTCTGGGAACTTGATC+CGG | + | chr8.4:12861703-12861722 | MS.gene060355:CDS | 50.0% |
| ! | ATGACTGGTCAGGAAGGAGT+AGG | + | chr8.4:12860780-12860799 | MS.gene060355:CDS | 50.0% |
| ! | GAGGAATTGCCTGTTGCTTG+TGG | + | chr8.4:12860393-12860412 | MS.gene060355:CDS | 50.0% |
| ! | GGCTTTCTAGAGACACCAAC+AGG | - | chr8.4:12859703-12859722 | None:intergenic | 50.0% |
| ! | GTTTTGCACCTGGGCAGATT+TGG | + | chr8.4:12860235-12860254 | MS.gene060355:CDS | 50.0% |
| ! | TCCGAGGAAAGGGGAAGTAT+GGG | + | chr8.4:12861421-12861440 | MS.gene060355:CDS | 50.0% |
| !! | CCTTGGAAGCTTGCTGACTT+AGG | - | chr8.4:12859612-12859631 | None:intergenic | 50.0% |
| !! | GTGGTGATGGTCAAAGTCAC+GGG | + | chr8.4:12859971-12859990 | MS.gene060355:CDS | 50.0% |
| !! | TGGTGATGGTCAAAGTCACG+GGG | + | chr8.4:12859972-12859991 | MS.gene060355:CDS | 50.0% |
| !!! | GGCTGCTTATTTTGCTGCTG+TGG | - | chr8.4:12859418-12859437 | None:intergenic | 50.0% |
| ACACCGTTCTGCTTCTGTGG+AGG | - | chr8.4:12859439-12859458 | None:intergenic | 55.0% | |
| AGAAGAGGCCTTAAGGGCCA+AGG | + | chr8.4:12858916-12858935 | MS.gene060355:CDS | 55.0% | |
| ATGGCGATCTGAGAGGCTTC+TGG | + | chr8.4:12861690-12861709 | MS.gene060355:CDS | 55.0% | |
| CAGCCTCCACAGAAGCAGAA+CGG | + | chr8.4:12859433-12859452 | MS.gene060355:CDS | 55.0% | |
| CAGGCGGAAAAGATAAGGGC+GGG | + | chr8.4:12860060-12860079 | MS.gene060355:CDS | 55.0% | |
| CATGTGGCAGCGAGAATGCA+AGG | + | chr8.4:12860904-12860923 | MS.gene060355:CDS | 55.0% | |
| CGCGATTTCCTTGGCCCTTA+AGG | - | chr8.4:12858927-12858946 | None:intergenic | 55.0% | |
| CGCTACCGCCTTCATTCCTA+TGG | + | chr8.4:12861729-12861748 | MS.gene060355:CDS | 55.0% | |
| CTCTCCTGGATTTCGGTTGC+AGG | + | chr8.4:12860317-12860336 | MS.gene060355:CDS | 55.0% | |
| CTGGGGTTGAAGCTGAAGCA+TGG | - | chr8.4:12861049-12861068 | None:intergenic | 55.0% | |
| CTTCAGCTAGAACGCACAGC+TGG | + | chr8.4:12859115-12859134 | MS.gene060355:CDS | 55.0% | |
| GACGGCATGCTTACTTCCTG+TGG | + | chr8.4:12861290-12861309 | MS.gene060355:CDS | 55.0% | |
| GATTTCGGTTGCAGGCGACA+TGG | + | chr8.4:12860325-12860344 | MS.gene060355:CDS | 55.0% | |
| GCCCATACTTCCCCTTTCCT+CGG | - | chr8.4:12861425-12861444 | None:intergenic | 55.0% | |
| GCCGCGTTCTAATCAACCGA+AGG | + | chr8.4:12859318-12859337 | MS.gene060355:CDS | 55.0% | |
| GGCAGGCAGTCCAGAAAGTA+CGG | - | chr8.4:12859465-12859484 | None:intergenic | 55.0% | |
| GGCGGAAAAGAAGCTGCAGA+AGG | + | chr8.4:12860081-12860100 | MS.gene060355:CDS | 55.0% | |
| TGGCGATCTGAGAGGCTTCT+GGG | + | chr8.4:12861691-12861710 | MS.gene060355:CDS | 55.0% | |
| ! | GAAGAGCATGGCGATCTGAG+AGG | + | chr8.4:12861683-12861702 | MS.gene060355:CDS | 55.0% |
| ! | GGCTTCTGGGAACTTGATCC+GGG | + | chr8.4:12861704-12861723 | MS.gene060355:CDS | 55.0% |
| AATGAAGGCGGTAGCGCACC+CGG | - | chr8.4:12861725-12861744 | None:intergenic | 60.0% | |
| ACGGTGTGCGCCGTACTTTC+TGG | + | chr8.4:12859452-12859471 | MS.gene060355:CDS | 60.0% | |
| CGCACACCGTTCTGCTTCTG+TGG | - | chr8.4:12859442-12859461 | None:intergenic | 60.0% | |
| GCGGAAAAGATAAGGGCGGG+CGG | + | chr8.4:12860063-12860082 | MS.gene060355:CDS | 60.0% | |
| GTCGCCTGCAACCGAAATCC+AGG | - | chr8.4:12860324-12860343 | None:intergenic | 60.0% | |
| TTGCTGCTGTGGAGGCTGCT+GGG | - | chr8.4:12859407-12859426 | None:intergenic | 60.0% | |
| TTTGCTGCTGTGGAGGCTGC+TGG | - | chr8.4:12859408-12859427 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12858902 | 12861757 | 12858902 | ID=MS.gene060355 |
| chr8.4 | mRNA | 12858902 | 12861757 | 12858902 | ID=MS.gene060355.t1;Parent=MS.gene060355 |
| chr8.4 | exon | 12858902 | 12861757 | 12858902 | ID=MS.gene060355.t1.exon1;Parent=MS.gene060355.t1 |
| chr8.4 | CDS | 12858902 | 12861757 | 12858902 | ID=cds.MS.gene060355.t1;Parent=MS.gene060355.t1 |
| Gene Sequence |
| Protein sequence |
