Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074367.t1 | XP_003601289.1 | 97.1 | 612 | 18 | 0 | 3 | 614 | 17 | 628 | 2.30E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074367.t1 | P92982 | 69.4 | 245 | 75 | 0 | 366 | 610 | 374 | 618 | 3.3e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074367.t1 | G7J5I4 | 97.1 | 612 | 18 | 0 | 3 | 614 | 17 | 628 | 1.7e-197 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene074367 | 0.844569 | 6.97E-59 | -1.69E-46 |
| MS.gene049989 | MS.gene074367 | 0.82044 | 6.85E-53 | -1.69E-46 |
| MS.gene050297 | MS.gene074367 | 0.86344 | 2.49E-64 | -1.69E-46 |
| MS.gene051067 | MS.gene074367 | 0.821834 | 3.27E-53 | -1.69E-46 |
| MS.gene051263 | MS.gene074367 | 0.800155 | 1.65E-48 | -1.69E-46 |
| MS.gene052143 | MS.gene074367 | 0.812129 | 4.95E-51 | -1.69E-46 |
| MS.gene052367 | MS.gene074367 | 0.8154 | 9.43E-52 | -1.69E-46 |
| MS.gene056526 | MS.gene074367 | 0.819747 | 9.87E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene074367 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene059300 | MS.gene074367 | 0.820838 | 5.55E-53 | -1.69E-46 |
| MS.gene060473 | MS.gene074367 | 0.828247 | 1.00E-54 | -1.69E-46 |
| MS.gene060492 | MS.gene074367 | 0.812372 | 4.38E-51 | -1.69E-46 |
| MS.gene060565 | MS.gene074367 | 0.828336 | 9.51E-55 | -1.69E-46 |
| MS.gene06057 | MS.gene074367 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene074367 | 0.825545 | 4.42E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074367.t1 | MTR_3g078090 | 95.603 | 614 | 27 | 0 | 1 | 614 | 15 | 628 | 0.0 | 1186 |
| MS.gene074367.t1 | MTR_5g034320 | 52.483 | 604 | 269 | 4 | 22 | 613 | 32 | 629 | 0.0 | 620 |
| MS.gene074367.t1 | MTR_8g064560 | 50.403 | 621 | 291 | 8 | 3 | 613 | 13 | 626 | 0.0 | 595 |
| MS.gene074367.t1 | MTR_8g064530 | 49.528 | 636 | 289 | 12 | 1 | 613 | 17 | 643 | 0.0 | 591 |
| MS.gene074367.t1 | MTR_8g064500 | 60.507 | 276 | 108 | 1 | 338 | 613 | 99 | 373 | 1.09e-121 | 365 |
| MS.gene074367.t1 | MTR_4g133840 | 61.881 | 202 | 61 | 2 | 413 | 613 | 3 | 189 | 1.48e-90 | 278 |
| MS.gene074367.t1 | MTR_5g033340 | 49.770 | 217 | 107 | 2 | 399 | 614 | 166 | 381 | 1.55e-71 | 235 |
| MS.gene074367.t1 | MTR_5g033340 | 49.669 | 151 | 75 | 1 | 444 | 594 | 4 | 153 | 4.92e-44 | 162 |
| MS.gene074367.t1 | MTR_5g033330 | 50.467 | 214 | 104 | 2 | 399 | 611 | 405 | 617 | 2.31e-67 | 231 |
| MS.gene074367.t1 | MTR_5g033330 | 48.731 | 197 | 99 | 2 | 399 | 594 | 197 | 392 | 4.47e-56 | 200 |
| MS.gene074367.t1 | MTR_5g033330 | 46.995 | 183 | 95 | 2 | 413 | 594 | 3 | 184 | 2.74e-49 | 181 |
| MS.gene074367.t1 | MTR_5g033350 | 48.276 | 203 | 103 | 2 | 413 | 614 | 1 | 202 | 3.96e-67 | 218 |
| MS.gene074367.t1 | MTR_4g133830 | 42.286 | 350 | 169 | 8 | 80 | 417 | 50 | 378 | 9.12e-67 | 223 |
| MS.gene074367.t1 | MTR_5g033360 | 46.083 | 217 | 97 | 4 | 399 | 614 | 27 | 224 | 4.24e-61 | 202 |
| MS.gene074367.t1 | MTR_1g008530 | 35.602 | 191 | 116 | 3 | 425 | 612 | 37 | 223 | 1.36e-35 | 134 |
| MS.gene074367.t1 | MTR_1g008500 | 37.696 | 191 | 112 | 4 | 425 | 612 | 198 | 384 | 1.78e-35 | 138 |
| MS.gene074367.t1 | MTR_1g008560 | 35.602 | 191 | 116 | 3 | 425 | 612 | 143 | 329 | 2.56e-35 | 136 |
| MS.gene074367.t1 | MTR_1g008510 | 35.079 | 191 | 117 | 3 | 425 | 612 | 139 | 325 | 3.73e-35 | 135 |
| MS.gene074367.t1 | MTR_1g008590 | 34.884 | 215 | 132 | 5 | 399 | 610 | 113 | 322 | 3.92e-34 | 132 |
| MS.gene074367.t1 | MTR_8g075930 | 56.322 | 87 | 38 | 0 | 515 | 601 | 1 | 87 | 4.27e-34 | 125 |
| MS.gene074367.t1 | MTR_1g008470 | 36.449 | 214 | 129 | 5 | 399 | 610 | 89 | 297 | 1.32e-33 | 130 |
| MS.gene074367.t1 | MTR_0312s0030 | 34.419 | 215 | 133 | 5 | 399 | 610 | 113 | 322 | 1.36e-33 | 131 |
| MS.gene074367.t1 | MTR_1g007520 | 34.419 | 215 | 133 | 5 | 399 | 610 | 113 | 322 | 1.36e-33 | 131 |
| MS.gene074367.t1 | MTR_3g109490 | 36.652 | 221 | 125 | 6 | 399 | 611 | 107 | 320 | 2.53e-33 | 130 |
| MS.gene074367.t1 | MTR_1g008460 | 37.566 | 189 | 111 | 5 | 424 | 610 | 111 | 294 | 1.74e-31 | 124 |
| MS.gene074367.t1 | MTR_5g033430 | 55.682 | 88 | 37 | 2 | 528 | 614 | 26 | 112 | 8.24e-31 | 117 |
| MS.gene074367.t1 | MTR_1g008450 | 37.368 | 190 | 110 | 5 | 424 | 610 | 127 | 310 | 7.83e-30 | 120 |
| MS.gene074367.t1 | MTR_1g008580 | 34.286 | 175 | 108 | 3 | 441 | 612 | 1 | 171 | 2.36e-29 | 114 |
| MS.gene074367.t1 | MTR_3g116410 | 34.247 | 219 | 135 | 6 | 399 | 611 | 59 | 274 | 2.70e-29 | 118 |
| MS.gene074367.t1 | MTR_4g069570 | 34.389 | 221 | 129 | 7 | 399 | 610 | 120 | 333 | 3.27e-29 | 119 |
| MS.gene074367.t1 | MTR_5g033440 | 53.409 | 88 | 39 | 2 | 528 | 614 | 113 | 199 | 3.98e-29 | 115 |
| MS.gene074367.t1 | MTR_5g033440 | 52.273 | 88 | 40 | 2 | 528 | 614 | 26 | 112 | 3.12e-28 | 112 |
| MS.gene074367.t1 | MTR_5g033420 | 54.118 | 85 | 37 | 2 | 528 | 611 | 14 | 97 | 4.17e-28 | 112 |
| MS.gene074367.t1 | MTR_5g033420 | 45.312 | 64 | 35 | 0 | 547 | 610 | 145 | 208 | 2.48e-15 | 75.9 |
| MS.gene074367.t1 | MTR_3g107830 | 32.420 | 219 | 139 | 6 | 399 | 611 | 39 | 254 | 5.89e-28 | 113 |
| MS.gene074367.t1 | MTR_4g069680 | 32.990 | 194 | 118 | 5 | 425 | 611 | 97 | 285 | 1.10e-26 | 110 |
| MS.gene074367.t1 | MTR_4g069040 | 30.455 | 220 | 139 | 6 | 399 | 610 | 294 | 507 | 3.30e-26 | 113 |
| MS.gene074367.t1 | MTR_5g033450 | 54.217 | 83 | 36 | 2 | 533 | 614 | 223 | 304 | 3.92e-26 | 109 |
| MS.gene074367.t1 | MTR_3g116380 | 32.877 | 219 | 137 | 5 | 399 | 611 | 87 | 301 | 6.75e-26 | 108 |
| MS.gene074367.t1 | MTR_5g033410 | 52.381 | 84 | 38 | 2 | 532 | 614 | 315 | 397 | 5.60e-25 | 108 |
| MS.gene074367.t1 | MTR_5g033410 | 47.692 | 65 | 32 | 2 | 533 | 596 | 181 | 244 | 1.02e-11 | 67.8 |
| MS.gene074367.t1 | MTR_4g069550 | 29.864 | 221 | 141 | 6 | 399 | 611 | 247 | 461 | 7.67e-25 | 108 |
| MS.gene074367.t1 | MTR_3g116270 | 28.916 | 249 | 161 | 6 | 369 | 610 | 264 | 503 | 1.76e-23 | 104 |
| MS.gene074367.t1 | MTR_3g116320 | 32.143 | 224 | 110 | 8 | 399 | 601 | 474 | 676 | 1.17e-22 | 103 |
| MS.gene074367.t1 | MTR_4g069520 | 29.091 | 220 | 142 | 6 | 399 | 610 | 493 | 706 | 1.23e-22 | 103 |
| MS.gene074367.t1 | MTR_4g069520 | 29.091 | 220 | 142 | 6 | 399 | 610 | 507 | 720 | 1.70e-22 | 102 |
| MS.gene074367.t1 | MTR_6g086530 | 28.877 | 187 | 126 | 5 | 434 | 614 | 22 | 207 | 5.66e-16 | 77.4 |
| MS.gene074367.t1 | MTR_4g068420 | 29.412 | 136 | 73 | 5 | 479 | 610 | 2 | 118 | 1.56e-13 | 68.2 |
| MS.gene074367.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 467 | 610 | 294 | 429 | 3.41e-13 | 72.4 |
| MS.gene074367.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 467 | 610 | 335 | 470 | 4.16e-13 | 72.4 |
| MS.gene074367.t1 | MTR_8g045890 | 30.345 | 145 | 91 | 5 | 467 | 610 | 372 | 507 | 5.90e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074367.t1 | AT1G70370 | 53.333 | 600 | 267 | 6 | 20 | 613 | 33 | 625 | 0.0 | 624 |
| MS.gene074367.t1 | AT1G70370 | 53.333 | 600 | 267 | 6 | 20 | 613 | 33 | 625 | 0.0 | 624 |
| MS.gene074367.t1 | AT1G23760 | 53.109 | 595 | 271 | 5 | 20 | 613 | 34 | 621 | 0.0 | 624 |
| MS.gene074367.t1 | AT1G60390 | 53.141 | 589 | 270 | 4 | 22 | 610 | 38 | 620 | 0.0 | 588 |
| MS.gene074367.t1 | AT5G25610 | 34.921 | 189 | 119 | 3 | 424 | 610 | 203 | 389 | 1.72e-27 | 115 |
| MS.gene074367.t1 | AT1G49320 | 31.551 | 187 | 119 | 4 | 434 | 612 | 94 | 279 | 1.17e-20 | 92.8 |
Find 125 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTGGGACGCGCGTTTA+AGG | 0.171525 | 3.4:+74869377 | MS.gene074367:CDS |
| TGACAATAATAGAGTAAATA+AGG | 0.192990 | 3.4:-74869909 | None:intergenic |
| GCTGCGTCGTTTACGAATTA+TGG | 0.219517 | 3.4:+74869270 | MS.gene074367:CDS |
| TACGGCACCGGTTCAGTTTC+CGG | 0.228326 | 3.4:+74869162 | MS.gene074367:CDS |
| GCGTTTGGATTCAAATCTTA+TGG | 0.236560 | 3.4:+74869357 | MS.gene074367:CDS |
| AACGACACTTTCACTGAATA+TGG | 0.249572 | 3.4:+74869312 | MS.gene074367:CDS |
| TACGGTTCCGGTTCAAATTC+CGG | 0.253560 | 3.4:+74868823 | MS.gene074367:CDS |
| GTTTGGAATAGGTGTATTCT+TGG | 0.261652 | 3.4:-74868330 | None:intergenic |
| GCTTCATAAACTCTCACTTT+AGG | 0.266040 | 3.4:-74869939 | None:intergenic |
| CTTCATAAACTCTCACTTTA+GGG | 0.270723 | 3.4:-74869938 | None:intergenic |
| TTCACCGGTTACGGTGAATT+AGG | 0.291344 | 3.4:+74869066 | MS.gene074367:CDS |
| CTCAACCTCGAGGATGAAAA+TGG | 0.315748 | 3.4:-74869600 | None:intergenic |
| TAAGCTTTGAAACTACTCTT+TGG | 0.317297 | 3.4:-74869141 | None:intergenic |
| GTGGATTGGTAAAGTGTGTT+TGG | 0.328141 | 3.4:-74868574 | None:intergenic |
| GTGTGGAGCAGAGGGTATTA+TGG | 0.345374 | 3.4:-74868525 | None:intergenic |
| CACCGACGTTAGCGCGGTTC+CGG | 0.345400 | 3.4:-74869206 | None:intergenic |
| TTGAGGGATTGGAAGTTTGT+TGG | 0.345994 | 3.4:-74868413 | None:intergenic |
| AAAATGTGAACGGGTCAAAA+AGG | 0.347765 | 3.4:+74869808 | MS.gene074367:CDS |
| GATAGAAGAAATTGAGGGAT+TGG | 0.350407 | 3.4:-74868424 | None:intergenic |
| GGATTCAAATCTTATGGATT+GGG | 0.380176 | 3.4:+74869363 | MS.gene074367:CDS |
| TACGGTAACGATACAAATTC+TGG | 0.381041 | 3.4:+74868949 | MS.gene074367:CDS |
| CAATCAACATTCACCGGTTA+CGG | 0.396679 | 3.4:+74869057 | MS.gene074367:CDS |
| GCTACGGGTAAAACCGCGTT+TGG | 0.402697 | 3.4:+74869342 | MS.gene074367:CDS |
| TGGATTCAAATCTTATGGAT+TGG | 0.403800 | 3.4:+74869362 | MS.gene074367:CDS |
| TGGATTGGTAAAGTGTGTTT+GGG | 0.405593 | 3.4:-74868573 | None:intergenic |
| TGTTCCTAATTCACCGTAAC+CGG | 0.405892 | 3.4:-74869070 | None:intergenic |
| GAAGTTTGAGTCTGATTTGT+TGG | 0.408309 | 3.4:-74868602 | None:intergenic |
| TGGCGAATGAGTGAGGCTTT+AGG | 0.421159 | 3.4:-74868373 | None:intergenic |
| GCTTTAGATAGAAGAAATTG+AGG | 0.426125 | 3.4:-74868430 | None:intergenic |
| TTTGGAATAGGTGTATTCTT+GGG | 0.431402 | 3.4:-74868329 | None:intergenic |
| AACTTCACAAACTACGGTTC+CGG | 0.437081 | 3.4:+74868811 | MS.gene074367:CDS |
| ATCGGAACCGGAAACTGAAC+CGG | 0.438686 | 3.4:-74869169 | None:intergenic |
| GTTGTTTGTGTTTAAACCGT+TGG | 0.449038 | 3.4:-74868701 | None:intergenic |
| AAGAGTAGTTTCAAAGCTTA+CGG | 0.459173 | 3.4:+74869144 | MS.gene074367:CDS |
| TTTGTTTGAAGAGGTTTATG+AGG | 0.460977 | 3.4:-74868483 | None:intergenic |
| TCGAAGGAGCAGAATAAGTA+TGG | 0.462522 | 3.4:-74868547 | None:intergenic |
| GCGTAGTGTTGTGGTGTAAG+AGG | 0.464051 | 3.4:-74868457 | None:intergenic |
| AGTGAGGCTTTAGGAGTGAA+AGG | 0.471322 | 3.4:-74868364 | None:intergenic |
| CTTTAGATAGAAGAAATTGA+GGG | 0.472030 | 3.4:-74868429 | None:intergenic |
| AATTTCGATGATAGAGATAA+GGG | 0.479014 | 3.4:-74869576 | None:intergenic |
| GAATGTTGATTGAAGAATGT+TGG | 0.483388 | 3.4:-74869046 | None:intergenic |
| GTGAGGCTTTAGGAGTGAAA+GGG | 0.487675 | 3.4:-74868363 | None:intergenic |
| TCCGATGCCGGAATTTGAAC+CGG | 0.489824 | 3.4:-74868830 | None:intergenic |
| AGTTTCAAAGCTTACGGCAC+CGG | 0.495602 | 3.4:+74869150 | MS.gene074367:CDS |
| TTCAACAGCTACGCAGAAAA+CGG | 0.500011 | 3.4:+74868772 | MS.gene074367:CDS |
| TCCGGTTCAAATTCCGGCAT+CGG | 0.500822 | 3.4:+74868829 | MS.gene074367:CDS |
| TAAGTATGGTGTGGAGCAGA+GGG | 0.501798 | 3.4:-74868533 | None:intergenic |
| TTATGGAGAATTGATGAGAA+GGG | 0.501836 | 3.4:-74868508 | None:intergenic |
| ACTAACAAAAGTATCGGAAC+CGG | 0.503188 | 3.4:-74869181 | None:intergenic |
| GACAATAATAGAGTAAATAA+GGG | 0.503977 | 3.4:-74869908 | None:intergenic |
| ATTCTTCAATCAACATTCAC+CGG | 0.504853 | 3.4:+74869051 | MS.gene074367:CDS |
| AAAAGAAGCGTTTCACGCGC+GGG | 0.508596 | 3.4:+74869629 | MS.gene074367:CDS |
| AAACAACTGAAAATGTGAAC+GGG | 0.509569 | 3.4:+74869799 | MS.gene074367:CDS |
| TCTAAGTCAAAGATTAATCA+TGG | 0.517107 | 3.4:+74869981 | MS.gene074367:CDS |
| TGATAATTTGTGATTGTTAG+CGG | 0.517556 | 3.4:-74868917 | None:intergenic |
| AAGCCTCACTCATTCGCCAT+TGG | 0.520046 | 3.4:+74868377 | MS.gene074367:CDS |
| TAATTTCGATGATAGAGATA+AGG | 0.525086 | 3.4:-74869577 | None:intergenic |
| AACACAAACTTCACAAACTA+CGG | 0.525394 | 3.4:+74868805 | MS.gene074367:CDS |
| TTTCCTTCCTCAACTAGAAG+TGG | 0.526085 | 3.4:-74870129 | None:intergenic |
| ATGAGGTTTGCGTAGTGTTG+TGG | 0.527522 | 3.4:-74868466 | None:intergenic |
| ATGCGAGAGGGAACCTAGTG+TGG | 0.528725 | 3.4:+74869695 | MS.gene074367:CDS |
| ATTCGTAAACGACGCAGCAC+CGG | 0.530336 | 3.4:-74869265 | None:intergenic |
| ATTGTTAGCGGCGGAGTCGT+AGG | 0.531751 | 3.4:-74868905 | None:intergenic |
| AGAGAGTCGATGTTAAAAGA+AGG | 0.533741 | 3.4:+74869498 | MS.gene074367:CDS |
| TCACATTGATACGTCATCGT+GGG | 0.534023 | 3.4:+74870016 | MS.gene074367:CDS |
| TTCAAAGCGTACAGTTTCAA+CGG | 0.534195 | 3.4:+74869111 | MS.gene074367:CDS |
| TAGGTGGTGAAACCGAGGTT+GGG | 0.534668 | 3.4:-74868886 | None:intergenic |
| CAGGTTTCTATAGCAACCAT+TGG | 0.539976 | 3.4:+74868301 | MS.gene074367:CDS |
| GAATATGGAAAAGGAGCTAC+GGG | 0.539985 | 3.4:+74869327 | MS.gene074367:CDS |
| ATTATGGAGAATTGATGAGA+AGG | 0.541035 | 3.4:-74868509 | None:intergenic |
| ACTTTCACTGAATATGGAAA+AGG | 0.542424 | 3.4:+74869318 | MS.gene074367:CDS |
| TTGGCGTTAGGGTCGGGACC+TGG | 0.542561 | 3.4:+74870059 | MS.gene074367:CDS |
| GATGATACGTTTCAAAGCTA+TGG | 0.547081 | 3.4:+74869228 | MS.gene074367:CDS |
| AACTATGGCTCGGCTCGACT+CGG | 0.548192 | 3.4:+74868652 | MS.gene074367:CDS |
| GGTTACGGTGAATTAGGAAC+AGG | 0.550847 | 3.4:+74869072 | MS.gene074367:CDS |
| GTTGGGACCTAATATAGAAA+CGG | 0.552509 | 3.4:-74869766 | None:intergenic |
| TCTCAATCATTCAACAGCTA+CGG | 0.558071 | 3.4:+74868973 | MS.gene074367:CDS |
| CCGGTAACTAACAAAAGTAT+CGG | 0.559070 | 3.4:-74869187 | None:intergenic |
| TGAATATGGAAAAGGAGCTA+CGG | 0.559278 | 3.4:+74869326 | MS.gene074367:CDS |
| AAAATTCTCAAACTATGGCT+CGG | 0.559945 | 3.4:+74868642 | MS.gene074367:CDS |
| AAATTATCATTCTCAAGCTA+CGG | 0.560543 | 3.4:+74868931 | MS.gene074367:CDS |
| TAAAAGAAGCGTTTCACGCG+CGG | 0.568395 | 3.4:+74869628 | MS.gene074367:CDS |
| GAAGCGTTTCACGCGCGGGA+TGG | 0.572632 | 3.4:+74869633 | MS.gene074367:CDS |
| AACAATTTCAGCACAATCAG+TGG | 0.580141 | 3.4:+74869435 | MS.gene074367:CDS |
| GGAGAAACAAAACGGTGCGT+TGG | 0.581963 | 3.4:+74869717 | MS.gene074367:CDS |
| GATTGGAAAAGTCGAAGCAA+TGG | 0.587728 | 3.4:+74869839 | MS.gene074367:CDS |
| ATAAGTATGGTGTGGAGCAG+AGG | 0.589833 | 3.4:-74868534 | None:intergenic |
| AAAACAACTGAAAATGTGAA+CGG | 0.591603 | 3.4:+74869798 | MS.gene074367:CDS |
| TCATCGTGGGGTCCTAAACA+TGG | 0.594368 | 3.4:+74870029 | MS.gene074367:CDS |
| AAGTGTGTTTGGGTGGTCGA+AGG | 0.601561 | 3.4:-74868563 | None:intergenic |
| CTCGTAAATGTACCCAACCT+CGG | 0.603933 | 3.4:+74868874 | MS.gene074367:CDS |
| TGAAGCTGATATTCTTGACG+TGG | 0.604319 | 3.4:+74869956 | MS.gene074367:CDS |
| TATGGTGCAAAATCGAAAGC+CGG | 0.605543 | 3.4:+74869246 | MS.gene074367:CDS |
| CGGTGCGTTGGATCAGCTGA+GGG | 0.613492 | 3.4:+74869729 | MS.gene074367:CDS |
| TGACGTATCAATGTGACAGA+TGG | 0.618564 | 3.4:-74870009 | None:intergenic |
| GTAGGTGGTGAAACCGAGGT+TGG | 0.619572 | 3.4:-74868887 | None:intergenic |
| CTAGTGTGGGAGAAACAAAA+CGG | 0.619596 | 3.4:+74869709 | MS.gene074367:CDS |
| TGCGAGAGGGAACCTAGTGT+GGG | 0.624114 | 3.4:+74869696 | MS.gene074367:CDS |
| GTAAATAGATTTGTAGAACC+AGG | 0.625185 | 3.4:+74869465 | MS.gene074367:CDS |
| ACGTGGACCACTTCTAGTTG+AGG | 0.629765 | 3.4:+74870122 | MS.gene074367:CDS |
| CACATTGATACGTCATCGTG+GGG | 0.632982 | 3.4:+74870017 | MS.gene074367:CDS |
| ACGGTGCGTTGGATCAGCTG+AGG | 0.635487 | 3.4:+74869728 | MS.gene074367:CDS |
| GTCACATTGATACGTCATCG+TGG | 0.637640 | 3.4:+74870015 | MS.gene074367:CDS |
| GGAGCAGAATAAGTATGGTG+TGG | 0.637921 | 3.4:-74868542 | None:intergenic |
| TATGGACAATCGTTTAACGA+AGG | 0.638176 | 3.4:+74869288 | MS.gene074367:CDS |
| TACGGAAAACGTGTTCGTAG+CGG | 0.638765 | 3.4:+74868991 | MS.gene074367:CDS |
| GTTAGCGGCGGAGTCGTAGG+TGG | 0.640286 | 3.4:-74868902 | None:intergenic |
| CGCGCTTAAAGAATGCGAGA+GGG | 0.646475 | 3.4:+74869683 | MS.gene074367:CDS |
| TTAGAGATAAAATGCCTGCA+AGG | 0.646765 | 3.4:+74869544 | MS.gene074367:CDS |
| TACGGTGAATTAGGAACAGG+AGG | 0.647425 | 3.4:+74869075 | MS.gene074367:CDS |
| TCAGGCTCAACTCGTCGCGG+TGG | 0.649482 | 3.4:+74868745 | MS.gene074367:CDS |
| ACGCGCTTAAAGAATGCGAG+AGG | 0.653096 | 3.4:+74869682 | MS.gene074367:CDS |
| GTTCCAATGGCGAATGAGTG+AGG | 0.654041 | 3.4:-74868380 | None:intergenic |
| ATTGGTAAAGTGTGTTTGGG+TGG | 0.654549 | 3.4:-74868570 | None:intergenic |
| TATGGCTCGGCTCGACTCGG+CGG | 0.655706 | 3.4:+74868655 | MS.gene074367:CDS |
| TATATTAGGTCCCAACGTGG+TGG | 0.658022 | 3.4:+74869773 | MS.gene074367:CDS |
| GGAAAAGTCGAAGCAATGGA+CGG | 0.666675 | 3.4:+74869843 | MS.gene074367:CDS |
| TTCTATATTAGGTCCCAACG+TGG | 0.667872 | 3.4:+74869770 | MS.gene074367:CDS |
| TATCATCACCGACGTTAGCG+CGG | 0.671074 | 3.4:-74869212 | None:intergenic |
| AGTCGTAGGTGGTGAAACCG+AGG | 0.675434 | 3.4:-74868891 | None:intergenic |
| AGCTCAGGCTCAACTCGTCG+CGG | 0.679160 | 3.4:+74868742 | MS.gene074367:CDS |
| TACCGGAACCGCGCTAACGT+CGG | 0.680954 | 3.4:+74869204 | MS.gene074367:CDS |
| TAATTTGTGATTGTTAGCGG+CGG | 0.683646 | 3.4:-74868914 | None:intergenic |
| AAAGTCGAAGCAATGGACGG+TGG | 0.689713 | 3.4:+74869846 | MS.gene074367:CDS |
| ATAAGATTTGAATCCAAACG+CGG | 0.725665 | 3.4:-74869355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAATTCTCAAACTA+TGG | + | chr3.4:74868637-74868656 | MS.gene074367:CDS | 20.0% |
| !! | GACAATAATAGAGTAAATAA+GGG | - | chr3.4:74869911-74869930 | None:intergenic | 20.0% |
| !! | TGACAATAATAGAGTAAATA+AGG | - | chr3.4:74869912-74869931 | None:intergenic | 20.0% |
| !!! | TTTAAGGTATACAACAAAAA+CGG | + | chr3.4:74869393-74869412 | MS.gene074367:CDS | 20.0% |
| ! | AAAACAACTGAAAATGTGAA+CGG | + | chr3.4:74869798-74869817 | MS.gene074367:CDS | 25.0% |
| ! | AAATTATCATTCTCAAGCTA+CGG | + | chr3.4:74868931-74868950 | MS.gene074367:CDS | 25.0% |
| ! | AATTTCGATGATAGAGATAA+GGG | - | chr3.4:74869579-74869598 | None:intergenic | 25.0% |
| ! | CTTTAGATAGAAGAAATTGA+GGG | - | chr3.4:74868432-74868451 | None:intergenic | 25.0% |
| ! | TAATTTCGATGATAGAGATA+AGG | - | chr3.4:74869580-74869599 | None:intergenic | 25.0% |
| ! | TCTAAGTCAAAGATTAATCA+TGG | + | chr3.4:74869981-74870000 | MS.gene074367:CDS | 25.0% |
| !! | TGATAATTTGTGATTGTTAG+CGG | - | chr3.4:74868920-74868939 | None:intergenic | 25.0% |
| !!! | GAATTTTTTGTTTGAGTAGA+CGG | - | chr3.4:74868629-74868648 | None:intergenic | 25.0% |
| AAAATTCTCAAACTATGGCT+CGG | + | chr3.4:74868642-74868661 | MS.gene074367:CDS | 30.0% | |
| AAACAACTGAAAATGTGAAC+GGG | + | chr3.4:74869799-74869818 | MS.gene074367:CDS | 30.0% | |
| AACACAAACTTCACAAACTA+CGG | + | chr3.4:74868805-74868824 | MS.gene074367:CDS | 30.0% | |
| AAGAGTAGTTTCAAAGCTTA+CGG | + | chr3.4:74869144-74869163 | MS.gene074367:CDS | 30.0% | |
| ACTTTCACTGAATATGGAAA+AGG | + | chr3.4:74869318-74869337 | MS.gene074367:CDS | 30.0% | |
| ATAAGATTTGAATCCAAACG+CGG | - | chr3.4:74869358-74869377 | None:intergenic | 30.0% | |
| ATTATGGAGAATTGATGAGA+AGG | - | chr3.4:74868512-74868531 | None:intergenic | 30.0% | |
| ATTCTTCAATCAACATTCAC+CGG | + | chr3.4:74869051-74869070 | MS.gene074367:CDS | 30.0% | |
| CTTCATAAACTCTCACTTTA+GGG | - | chr3.4:74869941-74869960 | None:intergenic | 30.0% | |
| GGATTCAAATCTTATGGATT+GGG | + | chr3.4:74869363-74869382 | MS.gene074367:CDS | 30.0% | |
| GTAAATAGATTTGTAGAACC+AGG | + | chr3.4:74869465-74869484 | MS.gene074367:CDS | 30.0% | |
| TCATTCAAAAACTACTCCAA+CGG | + | chr3.4:74868685-74868704 | MS.gene074367:CDS | 30.0% | |
| TGGATTCAAATCTTATGGAT+TGG | + | chr3.4:74869362-74869381 | MS.gene074367:CDS | 30.0% | |
| TTATGGAGAATTGATGAGAA+GGG | - | chr3.4:74868511-74868530 | None:intergenic | 30.0% | |
| TTTGTTTGAAGAGGTTTATG+AGG | - | chr3.4:74868486-74868505 | None:intergenic | 30.0% | |
| ! | GAATGTTGATTGAAGAATGT+TGG | - | chr3.4:74869049-74869068 | None:intergenic | 30.0% |
| ! | GACTTTTCCGTTTCTATATT+AGG | + | chr3.4:74869759-74869778 | MS.gene074367:CDS | 30.0% |
| ! | GCTTTAGATAGAAGAAATTG+AGG | - | chr3.4:74868433-74868452 | None:intergenic | 30.0% |
| ! | GGCATTTTATCTCTAATATC+TGG | - | chr3.4:74869540-74869559 | None:intergenic | 30.0% |
| ! | TTTGGAATAGGTGTATTCTT+GGG | - | chr3.4:74868332-74868351 | None:intergenic | 30.0% |
| !! | GTTTGTCTTTTGTTTGGAAT+AGG | - | chr3.4:74868344-74868363 | None:intergenic | 30.0% |
| !! | TAAGCTTTGAAACTACTCTT+TGG | - | chr3.4:74869144-74869163 | None:intergenic | 30.0% |
| !! | TTTTTGAGAATGATATGACG+TGG | + | chr3.4:74870105-74870124 | MS.gene074367:CDS | 30.0% |
| !!! | ATTTGTTGGTTTTTGTGGAT+TGG | - | chr3.4:74868591-74868610 | None:intergenic | 30.0% |
| AAAATGTGAACGGGTCAAAA+AGG | + | chr3.4:74869808-74869827 | MS.gene074367:CDS | 35.0% | |
| AACAATTTCAGCACAATCAG+TGG | + | chr3.4:74869435-74869454 | MS.gene074367:CDS | 35.0% | |
| AACGACACTTTCACTGAATA+TGG | + | chr3.4:74869312-74869331 | MS.gene074367:CDS | 35.0% | |
| AGAGAGTCGATGTTAAAAGA+AGG | + | chr3.4:74869498-74869517 | MS.gene074367:CDS | 35.0% | |
| GAAAAATTGAGGTGTGTCAT+TGG | + | chr3.4:74870081-74870100 | MS.gene074367:CDS | 35.0% | |
| GATAGAAGAAATTGAGGGAT+TGG | - | chr3.4:74868427-74868446 | None:intergenic | 35.0% | |
| GATGATACGTTTCAAAGCTA+TGG | + | chr3.4:74869228-74869247 | MS.gene074367:CDS | 35.0% | |
| GCGTTTGGATTCAAATCTTA+TGG | + | chr3.4:74869357-74869376 | MS.gene074367:CDS | 35.0% | |
| GCTTCATAAACTCTCACTTT+AGG | - | chr3.4:74869942-74869961 | None:intergenic | 35.0% | |
| GTTGGGACCTAATATAGAAA+CGG | - | chr3.4:74869769-74869788 | None:intergenic | 35.0% | |
| GTTGTTTGTGTTTAAACCGT+TGG | - | chr3.4:74868704-74868723 | None:intergenic | 35.0% | |
| TACGGTAACGATACAAATTC+TGG | + | chr3.4:74868949-74868968 | MS.gene074367:CDS | 35.0% | |
| TATGGACAATCGTTTAACGA+AGG | + | chr3.4:74869288-74869307 | MS.gene074367:CDS | 35.0% | |
| TCGTTCAAAAAATACAGCTC+AGG | + | chr3.4:74868727-74868746 | MS.gene074367:CDS | 35.0% | |
| TCTCAATCATTCAACAGCTA+CGG | + | chr3.4:74868973-74868992 | MS.gene074367:CDS | 35.0% | |
| TGAATATGGAAAAGGAGCTA+CGG | + | chr3.4:74869326-74869345 | MS.gene074367:CDS | 35.0% | |
| TTAGAGATAAAATGCCTGCA+AGG | + | chr3.4:74869544-74869563 | MS.gene074367:CDS | 35.0% | |
| TTCAAAGCGTACAGTTTCAA+CGG | + | chr3.4:74869111-74869130 | MS.gene074367:CDS | 35.0% | |
| ! | AATTACCATTTTCATCCTCG+AGG | + | chr3.4:74869595-74869614 | MS.gene074367:CDS | 35.0% |
| ! | CCGATACTTTTGTTAGTTAC+CGG | + | chr3.4:74869187-74869206 | MS.gene074367:CDS | 35.0% |
| ! | CCGGTAACTAACAAAAGTAT+CGG | - | chr3.4:74869190-74869209 | None:intergenic | 35.0% |
| ! | GAAAGGGTTTGTCTTTTGTT+TGG | - | chr3.4:74868350-74868369 | None:intergenic | 35.0% |
| ! | GAAGTTTGAGTCTGATTTGT+TGG | - | chr3.4:74868605-74868624 | None:intergenic | 35.0% |
| ! | GACTCTCTGAAAAATTTACC+TGG | - | chr3.4:74869486-74869505 | None:intergenic | 35.0% |
| ! | GTTTGGAATAGGTGTATTCT+TGG | - | chr3.4:74868333-74868352 | None:intergenic | 35.0% |
| ! | TAATTTGTGATTGTTAGCGG+CGG | - | chr3.4:74868917-74868936 | None:intergenic | 35.0% |
| ! | TGGAGATTTTTGTGTTCCAA+TGG | - | chr3.4:74868396-74868415 | None:intergenic | 35.0% |
| !! | ACTAACAAAAGTATCGGAAC+CGG | - | chr3.4:74869184-74869203 | None:intergenic | 35.0% |
| !! | AGAAGGGTTTTTGTTTGAAG+AGG | - | chr3.4:74868495-74868514 | None:intergenic | 35.0% |
| !! | TGGATTGGTAAAGTGTGTTT+GGG | - | chr3.4:74868576-74868595 | None:intergenic | 35.0% |
| !!! | GTCTGATTTGTTGGTTTTTG+TGG | - | chr3.4:74868596-74868615 | None:intergenic | 35.0% |
| !!! | TCCTAAACATGGTGCTTTTT+TGG | + | chr3.4:74870040-74870059 | MS.gene074367:CDS | 35.0% |
| AACTTCACAAACTACGGTTC+CGG | + | chr3.4:74868811-74868830 | MS.gene074367:CDS | 40.0% | |
| ATTGGTAAAGTGTGTTTGGG+TGG | - | chr3.4:74868573-74868592 | None:intergenic | 40.0% | |
| CAGGTTTCTATAGCAACCAT+TGG | + | chr3.4:74868301-74868320 | MS.gene074367:CDS | 40.0% | |
| CTAGTGTGGGAGAAACAAAA+CGG | + | chr3.4:74869709-74869728 | MS.gene074367:CDS | 40.0% | |
| GAATATGGAAAAGGAGCTAC+GGG | + | chr3.4:74869327-74869346 | MS.gene074367:CDS | 40.0% | |
| GATTGGAAAAGTCGAAGCAA+TGG | + | chr3.4:74869839-74869858 | MS.gene074367:CDS | 40.0% | |
| TATGGTGCAAAATCGAAAGC+CGG | + | chr3.4:74869246-74869265 | MS.gene074367:CDS | 40.0% | |
| TCAAAAAGGACGGTGATGAT+TGG | + | chr3.4:74869822-74869841 | MS.gene074367:CDS | 40.0% | |
| TCACATTGATACGTCATCGT+GGG | + | chr3.4:74870016-74870035 | MS.gene074367:CDS | 40.0% | |
| TCGAAGGAGCAGAATAAGTA+TGG | - | chr3.4:74868550-74868569 | None:intergenic | 40.0% | |
| TGAAGCTGATATTCTTGACG+TGG | + | chr3.4:74869956-74869975 | MS.gene074367:CDS | 40.0% | |
| TGACGTATCAATGTGACAGA+TGG | - | chr3.4:74870012-74870031 | None:intergenic | 40.0% | |
| TGTTCCTAATTCACCGTAAC+CGG | - | chr3.4:74869073-74869092 | None:intergenic | 40.0% | |
| TTCAACAGCTACGCAGAAAA+CGG | + | chr3.4:74868772-74868791 | MS.gene074367:CDS | 40.0% | |
| TTCTATATTAGGTCCCAACG+TGG | + | chr3.4:74869770-74869789 | MS.gene074367:CDS | 40.0% | |
| TTGAGGGATTGGAAGTTTGT+TGG | - | chr3.4:74868416-74868435 | None:intergenic | 40.0% | |
| ! | CAATCAACATTCACCGGTTA+CGG | + | chr3.4:74869057-74869076 | MS.gene074367:CDS | 40.0% |
| ! | GTATTCTTGGGTTTTGCCAA+TGG | - | chr3.4:74868320-74868339 | None:intergenic | 40.0% |
| ! | TGACACACCTCAATTTTTCC+AGG | - | chr3.4:74870080-74870099 | None:intergenic | 40.0% |
| ! | TTTTATCTCACTCAACCTCG+AGG | - | chr3.4:74869613-74869632 | None:intergenic | 40.0% |
| !! | GCCAAAAAAGCACCATGTTT+AGG | - | chr3.4:74870044-74870063 | None:intergenic | 40.0% |
| !! | GTGGATTGGTAAAGTGTGTT+TGG | - | chr3.4:74868577-74868596 | None:intergenic | 40.0% |
| !!! | ATGGTGCTTTTTTGGCGTTA+GGG | + | chr3.4:74870048-74870067 | MS.gene074367:CDS | 40.0% |
| AAGGGTAAAAACGACCTTGC+AGG | - | chr3.4:74869561-74869580 | None:intergenic | 45.0% | |
| AGTTTCAAAGCTTACGGCAC+CGG | + | chr3.4:74869150-74869169 | MS.gene074367:CDS | 45.0% | |
| ATAAGTATGGTGTGGAGCAG+AGG | - | chr3.4:74868537-74868556 | None:intergenic | 45.0% | |
| ATGAGGTTTGCGTAGTGTTG+TGG | - | chr3.4:74868469-74868488 | None:intergenic | 45.0% | |
| CACATTGATACGTCATCGTG+GGG | + | chr3.4:74870017-74870036 | MS.gene074367:CDS | 45.0% | |
| CTCAACCTCGAGGATGAAAA+TGG | - | chr3.4:74869603-74869622 | None:intergenic | 45.0% | |
| CTCGTAAATGTACCCAACCT+CGG | + | chr3.4:74868874-74868893 | MS.gene074367:CDS | 45.0% | |
| GCTGCGTCGTTTACGAATTA+TGG | + | chr3.4:74869270-74869289 | MS.gene074367:CDS | 45.0% | |
| GGAAAAGTCGAAGCAATGGA+CGG | + | chr3.4:74869843-74869862 | MS.gene074367:CDS | 45.0% | |
| GGAGCAGAATAAGTATGGTG+TGG | - | chr3.4:74868545-74868564 | None:intergenic | 45.0% | |
| GGTTACGGTGAATTAGGAAC+AGG | + | chr3.4:74869072-74869091 | MS.gene074367:CDS | 45.0% | |
| GTCACATTGATACGTCATCG+TGG | + | chr3.4:74870015-74870034 | MS.gene074367:CDS | 45.0% | |
| TAAGTATGGTGTGGAGCAGA+GGG | - | chr3.4:74868536-74868555 | None:intergenic | 45.0% | |
| TACGGAAAACGTGTTCGTAG+CGG | + | chr3.4:74868991-74869010 | MS.gene074367:CDS | 45.0% | |
| TACGGTGAATTAGGAACAGG+AGG | + | chr3.4:74869075-74869094 | MS.gene074367:CDS | 45.0% | |
| TACGGTTCCGGTTCAAATTC+CGG | + | chr3.4:74868823-74868842 | MS.gene074367:CDS | 45.0% | |
| TATATTAGGTCCCAACGTGG+TGG | + | chr3.4:74869773-74869792 | MS.gene074367:CDS | 45.0% | |
| TGTGAACGGGTCAAAAAGGA+CGG | + | chr3.4:74869812-74869831 | MS.gene074367:CDS | 45.0% | |
| ! | TTCACCGGTTACGGTGAATT+AGG | + | chr3.4:74869066-74869085 | MS.gene074367:CDS | 45.0% |
| !! | AGTGAGGCTTTAGGAGTGAA+AGG | - | chr3.4:74868367-74868386 | None:intergenic | 45.0% |
| !! | AGTTGTTTTCACCACCACGT+TGG | - | chr3.4:74869787-74869806 | None:intergenic | 45.0% |
| !! | GTGAGGCTTTAGGAGTGAAA+GGG | - | chr3.4:74868366-74868385 | None:intergenic | 45.0% |
| !! | GTTGTTTTCACCACCACGTT+GGG | - | chr3.4:74869786-74869805 | None:intergenic | 45.0% |
| !! | TAAAAGAAGCGTTTCACGCG+CGG | + | chr3.4:74869628-74869647 | MS.gene074367:CDS | 45.0% |
| !!! | CATGGTGCTTTTTTGGCGTT+AGG | + | chr3.4:74870047-74870066 | MS.gene074367:CDS | 45.0% |
| !!! | CGTTTTGTTTCTCCCACACT+AGG | - | chr3.4:74869711-74869730 | None:intergenic | 45.0% |
| !!! | TGCTTTTTTGGCGTTAGGGT+CGG | + | chr3.4:74870052-74870071 | MS.gene074367:CDS | 45.0% |
| AAAGTCGAAGCAATGGACGG+TGG | + | chr3.4:74869846-74869865 | MS.gene074367:CDS | 50.0% | |
| AAGCCTCACTCATTCGCCAT+TGG | + | chr3.4:74868377-74868396 | MS.gene074367:CDS | 50.0% | |
| AAGTGTGTTTGGGTGGTCGA+AGG | - | chr3.4:74868566-74868585 | None:intergenic | 50.0% | |
| ACGCGCTTAAAGAATGCGAG+AGG | + | chr3.4:74869682-74869701 | MS.gene074367:CDS | 50.0% | |
| ATCGGAACCGGAAACTGAAC+CGG | - | chr3.4:74869172-74869191 | None:intergenic | 50.0% | |
| ATTCGTAAACGACGCAGCAC+CGG | - | chr3.4:74869268-74869287 | None:intergenic | 50.0% | |
| CGCGCTTAAAGAATGCGAGA+GGG | + | chr3.4:74869683-74869702 | MS.gene074367:CDS | 50.0% | |
| GCGTAGTGTTGTGGTGTAAG+AGG | - | chr3.4:74868460-74868479 | None:intergenic | 50.0% | |
| GGAGAAACAAAACGGTGCGT+TGG | + | chr3.4:74869717-74869736 | MS.gene074367:CDS | 50.0% | |
| GTCGGGACCTGGAAAAATTG+AGG | + | chr3.4:74870070-74870089 | MS.gene074367:CDS | 50.0% | |
| GTTCCAATGGCGAATGAGTG+AGG | - | chr3.4:74868383-74868402 | None:intergenic | 50.0% | |
| TAGGTGGTGAAACCGAGGTT+GGG | - | chr3.4:74868889-74868908 | None:intergenic | 50.0% | |
| TATCATCACCGACGTTAGCG+CGG | - | chr3.4:74869215-74869234 | None:intergenic | 50.0% | |
| TCATCGTGGGGTCCTAAACA+TGG | + | chr3.4:74870029-74870048 | MS.gene074367:CDS | 50.0% | |
| TCCGATGCCGGAATTTGAAC+CGG | - | chr3.4:74868833-74868852 | None:intergenic | 50.0% | |
| TCCGGTTCAAATTCCGGCAT+CGG | + | chr3.4:74868829-74868848 | MS.gene074367:CDS | 50.0% | |
| TGGCGAATGAGTGAGGCTTT+AGG | - | chr3.4:74868376-74868395 | None:intergenic | 50.0% | |
| !! | AAAAGAAGCGTTTCACGCGC+GGG | + | chr3.4:74869629-74869648 | MS.gene074367:CDS | 50.0% |
| !! | GTGTGGAGCAGAGGGTATTA+TGG | - | chr3.4:74868528-74868547 | None:intergenic | 50.0% |
| !!! | GCTTTTGAAGTCTCCGATGC+CGG | - | chr3.4:74868845-74868864 | None:intergenic | 50.0% |
| !!! | GCTTTTTTGGCGTTAGGGTC+GGG | + | chr3.4:74870053-74870072 | MS.gene074367:CDS | 50.0% |
| AGTCGTAGGTGGTGAAACCG+AGG | - | chr3.4:74868894-74868913 | None:intergenic | 55.0% | |
| ATGCGAGAGGGAACCTAGTG+TGG | + | chr3.4:74869695-74869714 | MS.gene074367:CDS | 55.0% | |
| ATTGTTAGCGGCGGAGTCGT+AGG | - | chr3.4:74868908-74868927 | None:intergenic | 55.0% | |
| GCTACGGGTAAAACCGCGTT+TGG | + | chr3.4:74869342-74869361 | MS.gene074367:CDS | 55.0% | |
| GTAGGTGGTGAAACCGAGGT+TGG | - | chr3.4:74868890-74868909 | None:intergenic | 55.0% | |
| TGCGAGAGGGAACCTAGTGT+GGG | + | chr3.4:74869696-74869715 | MS.gene074367:CDS | 55.0% | |
| ! | AACTATGGCTCGGCTCGACT+CGG | + | chr3.4:74868652-74868671 | MS.gene074367:CDS | 55.0% |
| ! | TGGATTGGGACGCGCGTTTA+AGG | + | chr3.4:74869377-74869396 | MS.gene074367:CDS | 55.0% |
| !! | TACGGCACCGGTTCAGTTTC+CGG | + | chr3.4:74869162-74869181 | MS.gene074367:CDS | 55.0% |
| ACGGTGCGTTGGATCAGCTG+AGG | + | chr3.4:74869728-74869747 | MS.gene074367:CDS | 60.0% | |
| AGCTCAGGCTCAACTCGTCG+CGG | + | chr3.4:74868742-74868761 | MS.gene074367:CDS | 60.0% | |
| CGGTGCGTTGGATCAGCTGA+GGG | + | chr3.4:74869729-74869748 | MS.gene074367:CDS | 60.0% | |
| TACCGGAACCGCGCTAACGT+CGG | + | chr3.4:74869204-74869223 | MS.gene074367:CDS | 60.0% | |
| CACCGACGTTAGCGCGGTTC+CGG | - | chr3.4:74869209-74869228 | None:intergenic | 65.0% | |
| GTTAGCGGCGGAGTCGTAGG+TGG | - | chr3.4:74868905-74868924 | None:intergenic | 65.0% | |
| TCAGGCTCAACTCGTCGCGG+TGG | + | chr3.4:74868745-74868764 | MS.gene074367:CDS | 65.0% | |
| TTGGCGTTAGGGTCGGGACC+TGG | + | chr3.4:74870059-74870078 | MS.gene074367:CDS | 65.0% | |
| ! | GAAGCGTTTCACGCGCGGGA+TGG | + | chr3.4:74869633-74869652 | MS.gene074367:CDS | 65.0% |
| !! | TATGGCTCGGCTCGACTCGG+CGG | + | chr3.4:74868655-74868674 | MS.gene074367:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 74868298 | 74870142 | 74868298 | ID=MS.gene074367 |
| chr3.4 | mRNA | 74868298 | 74870142 | 74868298 | ID=MS.gene074367.t1;Parent=MS.gene074367 |
| chr3.4 | exon | 74868298 | 74870142 | 74868298 | ID=MS.gene074367.t1.exon1;Parent=MS.gene074367.t1 |
| chr3.4 | CDS | 74868298 | 74870142 | 74868298 | ID=cds.MS.gene074367.t1;Parent=MS.gene074367.t1 |
| Gene Sequence |
| Protein sequence |
