Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07537.t1 | XP_013468904.1 | 100 | 158 | 0 | 0 | 1 | 158 | 271 | 428 | 2.50E-87 | 331.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07537.t1 | Q9S9K4 | 53.5 | 157 | 69 | 2 | 2 | 158 | 273 | 425 | 7.3e-43 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07537.t1 | A0A072VMV4 | 100.0 | 158 | 0 | 0 | 1 | 158 | 271 | 428 | 1.8e-87 | 331.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene07537 | 0.80925 | 2.08E-50 | -1.69E-46 |
| MS.gene049669 | MS.gene07537 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene07537 | 0.801296 | 9.63E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene07537 | 0.817316 | 3.51E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene07537 | 0.81688 | 4.40E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene07537 | 0.814422 | 1.55E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene07537 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene07537 | 0.810442 | 1.15E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene07537 | 0.801318 | 9.53E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene07537 | 0.802222 | 6.21E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene07537 | 0.840028 | 1.11E-57 | -1.69E-46 |
| MS.gene054826 | MS.gene07537 | 0.812636 | 3.84E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene07537 | 0.825889 | 3.66E-54 | -1.69E-46 |
| MS.gene058739 | MS.gene07537 | 0.825311 | 5.02E-54 | -1.69E-46 |
| MS.gene061040 | MS.gene07537 | -0.834261 | 3.32E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCGGATATATTTGATTC+TGG | 0.259620 | 1.1:-58639735 | MS.gene07537:CDS |
| TGTCCTTTCCATCCTTAGTT+TGG | 0.271260 | 1.1:+58638085 | None:intergenic |
| GATATATTTGATTCTGGAAA+TGG | 0.285563 | 1.1:-58639729 | MS.gene07537:CDS |
| TGACTATCTGTTCCAATATA+AGG | 0.288332 | 1.1:-58638559 | MS.gene07537:intron |
| CTTGTACGATCTTGAGAATA+TGG | 0.302586 | 1.1:-58634817 | MS.gene07537:CDS |
| GTCCTTTCCATCCTTAGTTT+GGG | 0.310111 | 1.1:+58638086 | None:intergenic |
| ATGCGAGCTAATTTCAATTC+AGG | 0.348914 | 1.1:+58639543 | None:intergenic |
| GGAAAGGACATGACACTTCT+TGG | 0.353144 | 1.1:-58638072 | MS.gene07537:CDS |
| AAGTTCATACCACCTTATAT+TGG | 0.354647 | 1.1:+58638547 | None:intergenic |
| CAAATACCTTTGGAATTAGT+TGG | 0.360512 | 1.1:+58639646 | None:intergenic |
| TAGGCTGGTGTCCGATGTAT+TGG | 0.403880 | 1.1:-58638126 | MS.gene07537:CDS |
| TCAAAATGTAGTTTGACAAC+TGG | 0.411155 | 1.1:+58638612 | None:intergenic |
| GATCTTGAGAATATGGCTAT+TGG | 0.412629 | 1.1:-58634810 | MS.gene07537:CDS |
| TTGAAGAATATTGAAGTTGA+TGG | 0.419885 | 1.1:-58639774 | MS.gene07537:CDS |
| ATATATTTGATTCTGGAAAT+GGG | 0.463580 | 1.1:-58639728 | MS.gene07537:CDS |
| TTGTAACCTTGCAGTGTTGA+TGG | 0.473520 | 1.1:-58638642 | MS.gene07537:intron |
| TAATTTCAATTCAGGCTGAC+GGG | 0.516305 | 1.1:+58639551 | None:intergenic |
| AGTTGGTCATAGACTATGAC+AGG | 0.528228 | 1.1:+58639663 | None:intergenic |
| AAGGGCACAGTGATTGATAG+TGG | 0.533492 | 1.1:-58639705 | MS.gene07537:CDS |
| TTTGATTCTGGAAATGGGAA+GGG | 0.536848 | 1.1:-58639723 | MS.gene07537:CDS |
| GAAAAGTGTGACCCAAACTA+AGG | 0.537843 | 1.1:-58638097 | MS.gene07537:CDS |
| GATTGATAGTGGAACAACCT+TGG | 0.548951 | 1.1:-58639694 | MS.gene07537:CDS |
| CTAATTTCAATTCAGGCTGA+CGG | 0.548990 | 1.1:+58639550 | None:intergenic |
| ATTTGATTCTGGAAATGGGA+AGG | 0.551449 | 1.1:-58639724 | MS.gene07537:CDS |
| AGTGTGACCCAAACTAAGGA+TGG | 0.559654 | 1.1:-58638093 | MS.gene07537:CDS |
| TAACCTTGCAGTGTTGATGG+TGG | 0.562260 | 1.1:-58638639 | MS.gene07537:intron |
| ATGGCGTACTTTCCAGCATA+CGG | 0.571746 | 1.1:+58639498 | None:intergenic |
| TTGAGAATATGGCTATTGGA+TGG | 0.573054 | 1.1:-58634806 | MS.gene07537:CDS |
| CTGGTGTCCGATGTATTGGC+TGG | 0.602129 | 1.1:-58638122 | MS.gene07537:CDS |
| AAGGACATGACACTTCTTGG+AGG | 0.602130 | 1.1:-58638069 | MS.gene07537:intron |
| GACCCAAACTAAGGATGGAA+AGG | 0.607035 | 1.1:-58638088 | MS.gene07537:CDS |
| CCAGAATCAAATATATCCGA+GGG | 0.608496 | 1.1:+58639735 | None:intergenic |
| ATTGAAATTAGCTCGCATTG+AGG | 0.611001 | 1.1:-58639538 | MS.gene07537:CDS |
| TCCAGAATCAAATATATCCG+AGG | 0.613600 | 1.1:+58639734 | None:intergenic |
| TGATGTTCTACAGCTTCCCT+CGG | 0.625997 | 1.1:-58639751 | MS.gene07537:CDS |
| CTATGACCAACTAATTCCAA+AGG | 0.638550 | 1.1:-58639652 | MS.gene07537:intron |
| TATGACAGGAAGATAAGCCA+AGG | 0.661057 | 1.1:+58639677 | None:intergenic |
| TTGTAGGGCACATTACAATG+TGG | 0.689913 | 1.1:-58639799 | None:intergenic |
| TATTGGAACAGATAGTCATG+AGG | 0.699625 | 1.1:+58638564 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGTATAAAATAAAATAG+AGG | - | chr1.1:58635408-58635427 | MS.gene07537:intron | 10.0% |
| !!! | CTTTAAAATTTTATTTAACT+AGG | - | chr1.1:58635799-58635818 | MS.gene07537:intron | 10.0% |
| !! | AATTCAATTAATATTTCTTC+TGG | - | chr1.1:58634978-58634997 | MS.gene07537:intron | 15.0% |
| !! | ATTATTGTTTGCAAATATTA+GGG | - | chr1.1:58635167-58635186 | MS.gene07537:intron | 15.0% |
| !! | TATTATTGTTTGCAAATATT+AGG | - | chr1.1:58635166-58635185 | MS.gene07537:intron | 15.0% |
| !!! | ATTATTTTCAATTTCAGATT+TGG | - | chr1.1:58639727-58639746 | MS.gene07537:CDS | 15.0% |
| !!! | TGATTATTTTTCGATTTATT+AGG | - | chr1.1:58636634-58636653 | MS.gene07537:intron | 15.0% |
| !! | AAAAATGTTACAATGGTAAA+TGG | + | chr1.1:58635110-58635129 | None:intergenic | 20.0% |
| !! | ACTTGTACAAAATTGAAATT+TGG | + | chr1.1:58636125-58636144 | None:intergenic | 20.0% |
| !! | AGGATTCAGTTAATATATTA+GGG | - | chr1.1:58635450-58635469 | MS.gene07537:intron | 20.0% |
| !! | ATAGAACTGAAAAATAAACT+AGG | + | chr1.1:58636809-58636828 | None:intergenic | 20.0% |
| !! | ATTCTTAAATTAACACCAAA+TGG | + | chr1.1:58639573-58639592 | None:intergenic | 20.0% |
| !! | ATTTATCTATCTAACTTTGT+GGG | - | chr1.1:58637374-58637393 | MS.gene07537:intron | 20.0% |
| !! | CAAATTATCAAATGCATAAA+AGG | + | chr1.1:58638643-58638662 | None:intergenic | 20.0% |
| !! | CTTGTACAAAATTGAAATTT+GGG | + | chr1.1:58636124-58636143 | None:intergenic | 20.0% |
| !! | TAGAACTGAAAAATAAACTA+GGG | + | chr1.1:58636808-58636827 | None:intergenic | 20.0% |
| !! | TAGACCAACATATTATTAAT+AGG | + | chr1.1:58639408-58639427 | None:intergenic | 20.0% |
| !! | TAGGATTCAGTTAATATATT+AGG | - | chr1.1:58635449-58635468 | MS.gene07537:intron | 20.0% |
| !! | TCATGTGATTGTAAATTAAA+TGG | - | chr1.1:58636257-58636276 | MS.gene07537:intron | 20.0% |
| !! | TCTATACAAAAATGTTACAA+TGG | + | chr1.1:58635117-58635136 | None:intergenic | 20.0% |
| !! | TTACAAATGTAAGTTATTTG+AGG | - | chr1.1:58637670-58637689 | MS.gene07537:intron | 20.0% |
| !! | TTTATCATATGTTATTCTTG+TGG | + | chr1.1:58639316-58639335 | None:intergenic | 20.0% |
| !!! | AGAATGTTTATTTTTGTGAA+TGG | - | chr1.1:58639143-58639162 | MS.gene07537:intron | 20.0% |
| !!! | AGTATAAACAAAAGCATAAT+AGG | - | chr1.1:58639065-58639084 | MS.gene07537:intron | 20.0% |
| !!! | ATAAAAAATGTTGTTTTGCA+TGG | + | chr1.1:58638802-58638821 | None:intergenic | 20.0% |
| !!! | ATATATTTGATTCTGGAAAT+GGG | - | chr1.1:58634858-58634877 | MS.gene07537:intron | 20.0% |
| !!! | ATTTTTTATAGCACATAATG+TGG | + | chr1.1:58635573-58635592 | None:intergenic | 20.0% |
| !!! | CATTATTCATTTTTCCTATT+GGG | - | chr1.1:58635276-58635295 | MS.gene07537:intron | 20.0% |
| !!! | TCATTATTCATTTTTCCTAT+TGG | - | chr1.1:58635275-58635294 | MS.gene07537:intron | 20.0% |
| !!! | TCCTTTTCATTTTCTTTTTT+GGG | - | chr1.1:58635631-58635650 | MS.gene07537:intron | 20.0% |
| !!! | TCTGATGTTAAAATTCATTT+TGG | - | chr1.1:58639475-58639494 | MS.gene07537:intron | 20.0% |
| !!! | TTTTAAAGAACCATCTTAAA+TGG | + | chr1.1:58635787-58635806 | None:intergenic | 20.0% |
| ! | AAACAGCAAAATATGACATT+TGG | + | chr1.1:58635341-58635360 | None:intergenic | 25.0% |
| ! | AACAGCAAAATATGACATTT+GGG | + | chr1.1:58635340-58635359 | None:intergenic | 25.0% |
| ! | AACATCATATACTTGTTTGA+AGG | + | chr1.1:58637734-58637753 | None:intergenic | 25.0% |
| ! | AAGAGAAAATTAAGGAAGAA+AGG | + | chr1.1:58639530-58639549 | None:intergenic | 25.0% |
| ! | AATGTCAATATGATTCCTAT+CGG | - | chr1.1:58638376-58638395 | MS.gene07537:intron | 25.0% |
| ! | ACAAATGACATATTCACAAT+TGG | - | chr1.1:58638855-58638874 | MS.gene07537:intron | 25.0% |
| ! | AGAGAAAATTAAGGAAGAAA+GGG | + | chr1.1:58639529-58639548 | None:intergenic | 25.0% |
| ! | CCAAATTATAAATGGAATGA+AGG | - | chr1.1:58639112-58639131 | MS.gene07537:intron | 25.0% |
| ! | CCTTCATTCCATTTATAATT+TGG | + | chr1.1:58639115-58639134 | None:intergenic | 25.0% |
| ! | CTGGTTGAAATCAAATTAAA+AGG | + | chr1.1:58637592-58637611 | None:intergenic | 25.0% |
| ! | CTTGATAAGAGTTTATAAAC+AGG | + | chr1.1:58638492-58638511 | None:intergenic | 25.0% |
| ! | GATTTATCTATCTAACTTTG+TGG | - | chr1.1:58637373-58637392 | MS.gene07537:intron | 25.0% |
| ! | GCATCCTATTAATAATATGT+TGG | - | chr1.1:58639401-58639420 | MS.gene07537:intron | 25.0% |
| ! | GTAAGCAAGTTATTAATACA+CGG | + | chr1.1:58637987-58638006 | None:intergenic | 25.0% |
| ! | GTCTCTACACATATAATATA+TGG | + | chr1.1:58636236-58636255 | None:intergenic | 25.0% |
| ! | TATCAGTAAAATTCTCCATA+TGG | + | chr1.1:58636334-58636353 | None:intergenic | 25.0% |
| ! | TCATTCTAAACTATTCAACT+TGG | - | chr1.1:58636719-58636738 | MS.gene07537:intron | 25.0% |
| ! | TCTAATGCTAGAATTCATTT+GGG | - | chr1.1:58639654-58639673 | MS.gene07537:CDS | 25.0% |
| ! | TGCAAACTTATAAGCAAATA+AGG | + | chr1.1:58636673-58636692 | None:intergenic | 25.0% |
| ! | TTGAAGAATATTGAAGTTGA+TGG | - | chr1.1:58634812-58634831 | MS.gene07537:CDS | 25.0% |
| ! | TTTCTAGATACAAATACCTT+TGG | + | chr1.1:58634953-58634972 | None:intergenic | 25.0% |
| !! | ATAAACAAAAGCATAATAGG+TGG | - | chr1.1:58639068-58639087 | MS.gene07537:intron | 25.0% |
| !! | ATTTGTAACAAGCTTTTTGA+GGG | + | chr1.1:58637658-58637677 | None:intergenic | 25.0% |
| !! | GATATATTTGATTCTGGAAA+TGG | - | chr1.1:58634857-58634876 | MS.gene07537:intron | 25.0% |
| !! | GTCCTTTTCATTTTCTTTTT+TGG | - | chr1.1:58635630-58635649 | MS.gene07537:intron | 25.0% |
| !! | TAAACAAAAGCATAATAGGT+GGG | - | chr1.1:58639069-58639088 | MS.gene07537:intron | 25.0% |
| !!! | AATTATGTGTTACTTGTACT+TGG | - | chr1.1:58637562-58637581 | MS.gene07537:intron | 25.0% |
| AAAATCCTTCTCACAAGTAT+TGG | - | chr1.1:58639677-58639696 | MS.gene07537:CDS | 30.0% | |
| AAATGAAAAGGACCGAAAAA+AGG | + | chr1.1:58635623-58635642 | None:intergenic | 30.0% | |
| AACGCGCAGATAAAAAAAAT+AGG | + | chr1.1:58636767-58636786 | None:intergenic | 30.0% | |
| AAGCCTACAAGAGAAAATTA+AGG | + | chr1.1:58639538-58639557 | None:intergenic | 30.0% | |
| AAGTTCATACCACCTTATAT+TGG | + | chr1.1:58636042-58636061 | None:intergenic | 30.0% | |
| AATGTCAATATGATTCCCAT+CGG | - | chr1.1:58638110-58638129 | MS.gene07537:CDS | 30.0% | |
| AGAAAAAGAGAGAGAAAATG+AGG | + | chr1.1:58639633-58639652 | None:intergenic | 30.0% | |
| AGAAAATTAAGGAAGAAAGG+GGG | + | chr1.1:58639527-58639546 | None:intergenic | 30.0% | |
| AGGAATCATATTGACATTGT+TGG | + | chr1.1:58638374-58638393 | None:intergenic | 30.0% | |
| ATATAACACACAAAACACCT+GGG | + | chr1.1:58636194-58636213 | None:intergenic | 30.0% | |
| ATTACTCCCTTAACAAACTA+AGG | + | chr1.1:58635672-58635691 | None:intergenic | 30.0% | |
| ATTCCTCATATTGAACCAAA+TGG | - | chr1.1:58636592-58636611 | MS.gene07537:intron | 30.0% | |
| CAAAACATATAGAAGTTGAC+TGG | + | chr1.1:58637795-58637814 | None:intergenic | 30.0% | |
| CACAAATAACACAGTTATCA+AGG | + | chr1.1:58637228-58637247 | None:intergenic | 30.0% | |
| CTCTAATGCTAGAATTCATT+TGG | - | chr1.1:58639653-58639672 | MS.gene07537:CDS | 30.0% | |
| GAGAAAATTAAGGAAGAAAG+GGG | + | chr1.1:58639528-58639547 | None:intergenic | 30.0% | |
| GATAAGAGTTTATAAACAGG+AGG | + | chr1.1:58638489-58638508 | None:intergenic | 30.0% | |
| GCATGGTACCAAATTATAAA+TGG | - | chr1.1:58639104-58639123 | MS.gene07537:intron | 30.0% | |
| GCCCAAAAAAGAAAATGAAA+AGG | + | chr1.1:58635635-58635654 | None:intergenic | 30.0% | |
| GTGATCCTTTGTAGAAATTT+GGG | - | chr1.1:58638420-58638439 | MS.gene07537:intron | 30.0% | |
| TACAAAAGAGCCATTTAAGA+TGG | - | chr1.1:58635774-58635793 | MS.gene07537:intron | 30.0% | |
| TCAAAATGTAGTTTGACAAC+TGG | + | chr1.1:58635977-58635996 | None:intergenic | 30.0% | |
| TCAAATGCATAAAAGGATGT+TGG | + | chr1.1:58638636-58638655 | None:intergenic | 30.0% | |
| TGACTATCTGTTCCAATATA+AGG | - | chr1.1:58636027-58636046 | MS.gene07537:intron | 30.0% | |
| TGATCCTTTGTAGAAATTTG+GGG | - | chr1.1:58638421-58638440 | MS.gene07537:intron | 30.0% | |
| TGATGATCTAAATTGCCATA+TGG | - | chr1.1:58636316-58636335 | MS.gene07537:intron | 30.0% | |
| TTAACAAAGGATAGATCATC+AGG | + | chr1.1:58636283-58636302 | None:intergenic | 30.0% | |
| TTGAATGTTTAGATAGACAC+TGG | + | chr1.1:58638963-58638982 | None:intergenic | 30.0% | |
| TTTGTTCTCTGATGAAAGAT+TGG | - | chr1.1:58637811-58637830 | MS.gene07537:intron | 30.0% | |
| ! | AGTTGTCAAACTACATTTTG+AGG | - | chr1.1:58635976-58635995 | MS.gene07537:intron | 30.0% |
| ! | ATTCCATTTGGTTCAATATG+AGG | + | chr1.1:58636598-58636617 | None:intergenic | 30.0% |
| ! | CATATTCACAATTGGTGATA+AGG | - | chr1.1:58638863-58638882 | MS.gene07537:intron | 30.0% |
| ! | CATTTGTAACAAGCTTTTTG+AGG | + | chr1.1:58637659-58637678 | None:intergenic | 30.0% |
| ! | CTTCCTTAATTTTCTCTTGT+AGG | - | chr1.1:58639532-58639551 | MS.gene07537:CDS | 30.0% |
| ! | GTGATGTTGTGATGTATTTT+AGG | + | chr1.1:58637472-58637491 | None:intergenic | 30.0% |
| ! | GTTGTCAAACTACATTTTGA+GGG | - | chr1.1:58635977-58635996 | MS.gene07537:intron | 30.0% |
| ! | TCAGGTTATTGTCTTTTCAT+GGG | + | chr1.1:58638036-58638055 | None:intergenic | 30.0% |
| ! | TTTAAATGTTTTCCGTATGC+TGG | - | chr1.1:58635076-58635095 | MS.gene07537:intron | 30.0% |
| ! | TTTCCTTAATTTTGTCCTCT+AGG | - | chr1.1:58636441-58636460 | MS.gene07537:intron | 30.0% |
| !! | ATGTTGTGATGTATTTTAGG+AGG | + | chr1.1:58637469-58637488 | None:intergenic | 30.0% |
| !! | CAAATACCTTTGGAATTAGT+TGG | + | chr1.1:58634943-58634962 | None:intergenic | 30.0% |
| !! | CCATTTCCTTAGTTTGTTAA+GGG | - | chr1.1:58635663-58635682 | MS.gene07537:intron | 30.0% |
| !! | CTTTAAAATGTTGAGCCATT+TGG | - | chr1.1:58639555-58639574 | MS.gene07537:CDS | 30.0% |
| !! | TATTTCTTCTGGAGTACTTA+TGG | - | chr1.1:58634989-58635008 | MS.gene07537:intron | 30.0% |
| !! | TCCATTTCCTTAGTTTGTTA+AGG | - | chr1.1:58635662-58635681 | MS.gene07537:intron | 30.0% |
| !! | TTATCACATTCTAGTTCCAT+AGG | - | chr1.1:58637862-58637881 | MS.gene07537:intron | 30.0% |
| !! | TTCAGGTTATTGTCTTTTCA+TGG | + | chr1.1:58638037-58638056 | None:intergenic | 30.0% |
| !! | TTCATTTTTCCTATTGGGTA+TGG | - | chr1.1:58635281-58635300 | MS.gene07537:intron | 30.0% |
| !! | TTTGTAACAAGCTTTTTGAG+GGG | + | chr1.1:58637657-58637676 | None:intergenic | 30.0% |
| !!! | AGAGTGCTAATTCCTTTTTT+CGG | - | chr1.1:58635608-58635627 | MS.gene07537:intron | 30.0% |
| !!! | ATGTTTTGTTGATTCCAAAG+AGG | - | chr1.1:58637749-58637768 | MS.gene07537:intron | 30.0% |
| !!! | TTTTTTGGTTCGTTGTATGA+TGG | - | chr1.1:58637298-58637317 | MS.gene07537:intron | 30.0% |
| AAAACATGAGCTGAAACACA+TGG | - | chr1.1:58639219-58639238 | MS.gene07537:intron | 35.0% | |
| AATGTTTAGATAGACACTGG+TGG | + | chr1.1:58638960-58638979 | None:intergenic | 35.0% | |
| AGGAGATATCGAAAATTGCT+CGG | + | chr1.1:58638771-58638790 | None:intergenic | 35.0% | |
| ATAATCCATGACTGATGAGA+TGG | + | chr1.1:58638989-58639008 | None:intergenic | 35.0% | |
| ATATCGTCACCAAATCTTTG+TGG | + | chr1.1:58637699-58637718 | None:intergenic | 35.0% | |
| ATGCGAGCTAATTTCAATTC+AGG | + | chr1.1:58635046-58635065 | None:intergenic | 35.0% | |
| ATTACCAAAATGAGCCAAAG+TGG | + | chr1.1:58637348-58637367 | None:intergenic | 35.0% | |
| ATTAGAGAGAAGATCCTCTT+TGG | + | chr1.1:58637766-58637785 | None:intergenic | 35.0% | |
| ATTGAAATTAGCTCGCATTG+AGG | - | chr1.1:58635048-58635067 | MS.gene07537:intron | 35.0% | |
| CCAAGTTAGAGATAAAGAGA+GGG | + | chr1.1:58637444-58637463 | None:intergenic | 35.0% | |
| CCAGAATCAAATATATCCGA+GGG | + | chr1.1:58634854-58634873 | None:intergenic | 35.0% | |
| CCCTTAACAAACTAAGGAAA+TGG | + | chr1.1:58635666-58635685 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1.1:58638445-58638464 | MS.gene07537:intron | 35.0% | |
| CTAATTTCAATTCAGGCTGA+CGG | + | chr1.1:58635039-58635058 | None:intergenic | 35.0% | |
| CTATACAGTACCATGATTGA+GGG | + | chr1.1:58639382-58639401 | None:intergenic | 35.0% | |
| CTATCTGTTCCAATATAAGG+TGG | - | chr1.1:58636030-58636049 | MS.gene07537:intron | 35.0% | |
| CTATGACCAACTAATTCCAA+AGG | - | chr1.1:58634934-58634953 | MS.gene07537:intron | 35.0% | |
| CTCACTATAATCTTGACCAT+AGG | - | chr1.1:58638887-58638906 | MS.gene07537:intron | 35.0% | |
| CTCATGATAGTTATTGGCAT+CGG | + | chr1.1:58638671-58638690 | None:intergenic | 35.0% | |
| CTTGTACGATCTTGAGAATA+TGG | - | chr1.1:58639769-58639788 | MS.gene07537:CDS | 35.0% | |
| GAAAAACTACCTTGTCACAT+CGG | - | chr1.1:58638698-58638717 | MS.gene07537:intron | 35.0% | |
| GAAGTTGTCCCAACAAAAAT+AGG | + | chr1.1:58637055-58637074 | None:intergenic | 35.0% | |
| GAGTTGCATTTCAGTGAAAT+TGG | + | chr1.1:58637889-58637908 | None:intergenic | 35.0% | |
| GATATAACACACAAAACACC+TGG | + | chr1.1:58636195-58636214 | None:intergenic | 35.0% | |
| GATCTTGAGAATATGGCTAT+TGG | - | chr1.1:58639776-58639795 | MS.gene07537:CDS | 35.0% | |
| GGGAATCATATTGACATTGT+TGG | + | chr1.1:58638108-58638127 | None:intergenic | 35.0% | |
| GGTGATCCTTTGTAGAAATT+TGG | - | chr1.1:58638419-58638438 | MS.gene07537:intron | 35.0% | |
| GTAAGCAGGTTGTTAATACA+CGG | + | chr1.1:58638253-58638272 | None:intergenic | 35.0% | |
| TAATCCATGACTGATGAGAT+GGG | + | chr1.1:58638988-58639007 | None:intergenic | 35.0% | |
| TAATTTCAATTCAGGCTGAC+GGG | + | chr1.1:58635038-58635057 | None:intergenic | 35.0% | |
| TAGCTATTGAGCATTCCATT+TGG | + | chr1.1:58636610-58636629 | None:intergenic | 35.0% | |
| TATACAGTACCATGATTGAG+GGG | + | chr1.1:58639381-58639400 | None:intergenic | 35.0% | |
| TATCGTCACCAAATCTTTGT+GGG | + | chr1.1:58637698-58637717 | None:intergenic | 35.0% | |
| TATCTAACTTTGTGGGATCA+TGG | - | chr1.1:58637381-58637400 | MS.gene07537:intron | 35.0% | |
| TATTGGAACAGATAGTCATG+AGG | + | chr1.1:58636025-58636044 | None:intergenic | 35.0% | |
| TCCAGAATCAAATATATCCG+AGG | + | chr1.1:58634855-58634874 | None:intergenic | 35.0% | |
| TCGAAGTCAAGAGTTAACAA+AGG | + | chr1.1:58636296-58636315 | None:intergenic | 35.0% | |
| TCTCTCCTCATGATAGTTAT+TGG | + | chr1.1:58638677-58638696 | None:intergenic | 35.0% | |
| TGACACCAAACCTATTCAAA+GGG | - | chr1.1:58639262-58639281 | MS.gene07537:intron | 35.0% | |
| TGCTCAAGGTTTAACACAAA+TGG | + | chr1.1:58639448-58639467 | None:intergenic | 35.0% | |
| TGTTAAGGGAGTAATTGAGT+GGG | - | chr1.1:58635677-58635696 | MS.gene07537:intron | 35.0% | |
| TTCAGAGATAGAGATGACAA+AGG | + | chr1.1:58637544-58637563 | None:intergenic | 35.0% | |
| TTGAGAATATGGCTATTGGA+TGG | - | chr1.1:58639780-58639799 | MS.gene07537:CDS | 35.0% | |
| TTGTTAAGGGAGTAATTGAG+TGG | - | chr1.1:58635676-58635695 | MS.gene07537:intron | 35.0% | |
| TTTCAGTGAAATTGGACCTA+TGG | + | chr1.1:58637881-58637900 | None:intergenic | 35.0% | |
| ! | ATTTGATTCTGGAAATGGGA+AGG | - | chr1.1:58634862-58634881 | MS.gene07537:intron | 35.0% |
| ! | TGGGTGGAAGTATAATTTAG+TGG | + | chr1.1:58638017-58638036 | None:intergenic | 35.0% |
| ! | TGTGTTTCAGCTCATGTTTT+AGG | + | chr1.1:58639219-58639238 | None:intergenic | 35.0% |
| ! | TTAACTTTTGCACTTGAGCA+AGG | - | chr1.1:58635485-58635504 | MS.gene07537:intron | 35.0% |
| ! | TTTGATTCTGGAAATGGGAA+GGG | - | chr1.1:58634863-58634882 | MS.gene07537:intron | 35.0% |
| ! | TTTTAGTGATGAAGCACAGT+TGG | + | chr1.1:58638827-58638846 | None:intergenic | 35.0% |
| !! | AGGTCTACTGGTTCATAATT+TGG | - | chr1.1:58637200-58637219 | MS.gene07537:intron | 35.0% |
| !! | TTGGTGTCACTTATGAATGA+CGG | + | chr1.1:58639251-58639270 | None:intergenic | 35.0% |
| !!! | CTGCACTTGCTTTGTTTTTT+TGG | - | chr1.1:58637283-58637302 | MS.gene07537:intron | 35.0% |
| !!! | TGTTTTTGGTCTTTTGTCAC+TGG | - | chr1.1:58637165-58637184 | MS.gene07537:intron | 35.0% |
| AAAGCCAACACAAGGCAATT+AGG | - | chr1.1:58638551-58638570 | MS.gene07537:intron | 40.0% | |
| AAGCCAACACAAGGCAATTA+GGG | - | chr1.1:58638552-58638571 | MS.gene07537:intron | 40.0% | |
| AAGGCACAAGTTACTGGTAT+TGG | - | chr1.1:58637508-58637527 | MS.gene07537:intron | 40.0% | |
| AGAGTCCTATCTTACCAATG+TGG | - | chr1.1:58638510-58638529 | MS.gene07537:intron | 40.0% | |
| AGTTGGTCATAGACTATGAC+AGG | + | chr1.1:58634926-58634945 | None:intergenic | 40.0% | |
| ATACAGTACCATGATTGAGG+GGG | + | chr1.1:58639380-58639399 | None:intergenic | 40.0% | |
| ATCGTCACCAAATCTTTGTG+GGG | + | chr1.1:58637697-58637716 | None:intergenic | 40.0% | |
| ATGTTGTCACCATACCCAAT+AGG | + | chr1.1:58635293-58635312 | None:intergenic | 40.0% | |
| CACATCCAATACTTGTGAGA+AGG | + | chr1.1:58639685-58639704 | None:intergenic | 40.0% | |
| CAGCCTAGAGGACAAAATTA+AGG | + | chr1.1:58636447-58636466 | None:intergenic | 40.0% | |
| CCAATTGAACAGTAGCTTTC+AGG | + | chr1.1:58638340-58638359 | None:intergenic | 40.0% | |
| CCCTCGGATATATTTGATTC+TGG | - | chr1.1:58634851-58634870 | MS.gene07537:intron | 40.0% | |
| CCCTCTCTTTATCTCTAACT+TGG | - | chr1.1:58637441-58637460 | MS.gene07537:intron | 40.0% | |
| CCTGAAAGCTACTGTTCAAT+TGG | - | chr1.1:58638337-58638356 | MS.gene07537:intron | 40.0% | |
| CGATGCCAATAACTATCATG+AGG | - | chr1.1:58638669-58638688 | MS.gene07537:intron | 40.0% | |
| CTCGATTCATAACATAGCTC+AGG | + | chr1.1:58639034-58639053 | None:intergenic | 40.0% | |
| GAAAAAAACGCTTGTGAGAC+GGG | + | chr1.1:58639505-58639524 | None:intergenic | 40.0% | |
| GACACCAAACCTATTCAAAG+GGG | - | chr1.1:58639263-58639282 | MS.gene07537:intron | 40.0% | |
| GACATATGACAGTAGCAAGT+AGG | - | chr1.1:58635430-58635449 | MS.gene07537:intron | 40.0% | |
| GAGAGAGAAAATGAGGATCA+AGG | + | chr1.1:58639626-58639645 | None:intergenic | 40.0% | |
| GAGTCCTATCTTACCAATGT+GGG | - | chr1.1:58638511-58638530 | MS.gene07537:intron | 40.0% | |
| GATCACAAACGTTCCAACAA+CGG | + | chr1.1:58637264-58637283 | None:intergenic | 40.0% | |
| GCCAAGTTAGAGATAAAGAG+AGG | + | chr1.1:58637445-58637464 | None:intergenic | 40.0% | |
| GCTATACAGTACCATGATTG+AGG | + | chr1.1:58639383-58639402 | None:intergenic | 40.0% | |
| GGAAAAAAACGCTTGTGAGA+CGG | + | chr1.1:58639506-58639525 | None:intergenic | 40.0% | |
| GGATTATCTCCACACTGAAT+GGG | - | chr1.1:58639002-58639021 | MS.gene07537:intron | 40.0% | |
| GTAAAATCAGCAGACGATGA+TGG | - | chr1.1:58639171-58639190 | MS.gene07537:intron | 40.0% | |
| GTCCCAACAAAAATAGGAGA+AGG | + | chr1.1:58637049-58637068 | None:intergenic | 40.0% | |
| GTCCTTTCCATCCTTAGTTT+GGG | + | chr1.1:58636503-58636522 | None:intergenic | 40.0% | |
| GTGACACCAAACCTATTCAA+AGG | - | chr1.1:58639261-58639280 | MS.gene07537:intron | 40.0% | |
| TAGGCCCCAAATTTCTACAA+AGG | + | chr1.1:58638428-58638447 | None:intergenic | 40.0% | |
| TAGTCCCACATTGGTAAGAT+AGG | + | chr1.1:58638518-58638537 | None:intergenic | 40.0% | |
| TATGACAGGAAGATAAGCCA+AGG | + | chr1.1:58634912-58634931 | None:intergenic | 40.0% | |
| TCAACACTGCAAGGTTACAA+CGG | + | chr1.1:58635944-58635963 | None:intergenic | 40.0% | |
| TCCAGCAGGCTTCAAAATAT+TGG | + | chr1.1:58635380-58635399 | None:intergenic | 40.0% | |
| TCTCTGATGAAAGATTGGAC+TGG | - | chr1.1:58637816-58637835 | MS.gene07537:intron | 40.0% | |
| TGAACTATCTCACTGTGATC+AGG | + | chr1.1:58638743-58638762 | None:intergenic | 40.0% | |
| TGGAATTTAGACTGGTGCTT+CGG | - | chr1.1:58637401-58637420 | MS.gene07537:intron | 40.0% | |
| TGGATTATCTCCACACTGAA+TGG | - | chr1.1:58639001-58639020 | MS.gene07537:intron | 40.0% | |
| TGGCTGGAGATGAAATGTAT+TGG | + | chr1.1:58637328-58637347 | None:intergenic | 40.0% | |
| TGGGATCATGGAATTTAGAC+TGG | - | chr1.1:58637393-58637412 | MS.gene07537:intron | 40.0% | |
| TGTCCTTTCCATCCTTAGTT+TGG | + | chr1.1:58636504-58636523 | None:intergenic | 40.0% | |
| TTAGGGGAAGATCGCAATAA+AGG | - | chr1.1:58638569-58638588 | MS.gene07537:CDS | 40.0% | |
| TTAGTGGAAGAGTAGTAAGC+AGG | + | chr1.1:58638001-58638020 | None:intergenic | 40.0% | |
| ! | AATACCAGTAACTTGTGCCT+TGG | + | chr1.1:58637509-58637528 | None:intergenic | 40.0% |
| ! | ACTAATCTTTTTCCTCCAGC+AGG | + | chr1.1:58635394-58635413 | None:intergenic | 40.0% |
| ! | CTTAATTTTGTCCTCTAGGC+TGG | - | chr1.1:58636445-58636464 | MS.gene07537:intron | 40.0% |
| ! | GAAAAGTGTGACCCAAACTA+AGG | - | chr1.1:58636489-58636508 | MS.gene07537:intron | 40.0% |
| ! | GGTTATTGTCTTTTCATGGG+TGG | + | chr1.1:58638033-58638052 | None:intergenic | 40.0% |
| ! | TCAACTTGGTATCTAGAGCA+AGG | - | chr1.1:58636733-58636752 | MS.gene07537:intron | 40.0% |
| ! | TTGTAACCTTGCAGTGTTGA+TGG | - | chr1.1:58635944-58635963 | MS.gene07537:intron | 40.0% |
| ! | TTTTCTGCCAGCCAATACAT+CGG | + | chr1.1:58636474-58636493 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1.1:58638447-58638466 | None:intergenic | 40.0% |
| !! | GATTGATAGTGGAACAACCT+TGG | - | chr1.1:58634892-58634911 | MS.gene07537:intron | 40.0% |
| !!! | AATATTTTGAAGCCTGCTGG+AGG | - | chr1.1:58635379-58635398 | MS.gene07537:intron | 40.0% |
| !!! | CGCCTTCTCCTATTTTTGTT+GGG | - | chr1.1:58637044-58637063 | MS.gene07537:intron | 40.0% |
| !!! | TCCAATATTTTGAAGCCTGC+TGG | - | chr1.1:58635376-58635395 | MS.gene07537:intron | 40.0% |
| !!! | TCGCCTTCTCCTATTTTTGT+TGG | - | chr1.1:58637043-58637062 | MS.gene07537:intron | 40.0% |
| AAAGGCTGAATACCGGGTTA+TGG | + | chr1.1:58637956-58637975 | None:intergenic | 45.0% | |
| AACACCCATCTCATCAGTCA+TGG | - | chr1.1:58638981-58639000 | MS.gene07537:intron | 45.0% | |
| AAGGACATGACACTTCTTGG+AGG | - | chr1.1:58636517-58636536 | MS.gene07537:intron | 45.0% | |
| AATCCACCATCAACACTGCA+AGG | + | chr1.1:58635953-58635972 | None:intergenic | 45.0% | |
| ACCAAACCTATTCAAAGGGG+AGG | - | chr1.1:58639266-58639285 | MS.gene07537:intron | 45.0% | |
| AGCCAACACAAGGCAATTAG+GGG | - | chr1.1:58638553-58638572 | MS.gene07537:intron | 45.0% | |
| AGTGTGACCCAAACTAAGGA+TGG | - | chr1.1:58636493-58636512 | MS.gene07537:intron | 45.0% | |
| ATGGCGTACTTTCCAGCATA+CGG | + | chr1.1:58635091-58635110 | None:intergenic | 45.0% | |
| ATTCAAAGGGGAGGAGATTC+TGG | - | chr1.1:58639275-58639294 | MS.gene07537:intron | 45.0% | |
| CACAACATCACCCTTGCTAA+TGG | - | chr1.1:58637481-58637500 | MS.gene07537:intron | 45.0% | |
| CACAAGTGCACTTGATTCTC+TGG | - | chr1.1:58635890-58635909 | MS.gene07537:intron | 45.0% | |
| CAGAGAATCAAGTGCACTTG+TGG | + | chr1.1:58635892-58635911 | None:intergenic | 45.0% | |
| CAGTAGCTTTCAGGCATAGA+CGG | + | chr1.1:58638065-58638084 | None:intergenic | 45.0% | |
| CATCAGAGAGAGAATGCTCA+AGG | + | chr1.1:58639462-58639481 | None:intergenic | 45.0% | |
| CATTTCATCTCCAGCCACTT+TGG | - | chr1.1:58637331-58637350 | MS.gene07537:intron | 45.0% | |
| CCAAAACACGTGTCAAACGT+GGG | + | chr1.1:58637090-58637109 | None:intergenic | 45.0% | |
| CCAATTGAGCAGTAGCTTTC+AGG | + | chr1.1:58638074-58638093 | None:intergenic | 45.0% | |
| CCTGAAAGCTACTGCTCAAT+TGG | - | chr1.1:58638071-58638090 | MS.gene07537:CDS | 45.0% | |
| CGACCACAAAAGCTCACATA+TGG | - | chr1.1:58637924-58637943 | MS.gene07537:intron | 45.0% | |
| CGAGTACAAAGGCTGAATAC+CGG | + | chr1.1:58637963-58637982 | None:intergenic | 45.0% | |
| CGGTATTCAGCCTTTGTACT+CGG | - | chr1.1:58637961-58637980 | MS.gene07537:intron | 45.0% | |
| CGTATTATGCCGATGTGACA+AGG | + | chr1.1:58638710-58638729 | None:intergenic | 45.0% | |
| CTACAAAGGATCACCTCGAA+AGG | + | chr1.1:58638414-58638433 | None:intergenic | 45.0% | |
| GAATCTCCTCCCCTTTGAAT+AGG | + | chr1.1:58639275-58639294 | None:intergenic | 45.0% | |
| GACCCAAACTAAGGATGGAA+AGG | - | chr1.1:58636498-58636517 | MS.gene07537:intron | 45.0% | |
| GAGAGAGCGAGTAAGTTTAC+TGG | + | chr1.1:58637611-58637630 | None:intergenic | 45.0% | |
| GAGTACAAAGGCTGAATACC+GGG | + | chr1.1:58637962-58637981 | None:intergenic | 45.0% | |
| GCACTTGATTCTCTGGCATA+TGG | - | chr1.1:58635897-58635916 | MS.gene07537:intron | 45.0% | |
| GGAAAGGACATGACACTTCT+TGG | - | chr1.1:58636514-58636533 | MS.gene07537:intron | 45.0% | |
| GGGAAGATCGCAATAAAGGT+GGG | - | chr1.1:58638573-58638592 | MS.gene07537:CDS | 45.0% | |
| GTCACTTATGAATGACGGTG+TGG | + | chr1.1:58639246-58639265 | None:intergenic | 45.0% | |
| TAATACACGGCCGAGTACAA+AGG | + | chr1.1:58637974-58637993 | None:intergenic | 45.0% | |
| TACAGTACCATGATTGAGGG+GGG | + | chr1.1:58639379-58639398 | None:intergenic | 45.0% | |
| TATCGCATCACAAGGTCTAC+TGG | - | chr1.1:58637188-58637207 | MS.gene07537:intron | 45.0% | |
| TCACGTGCCAAAAAGACGTT+CGG | + | chr1.1:58636970-58636989 | None:intergenic | 45.0% | |
| TCACTGTGAATGTTGTCCTG+AGG | - | chr1.1:58637129-58637148 | MS.gene07537:intron | 45.0% | |
| TCCAAAACACGTGTCAAACG+TGG | + | chr1.1:58637091-58637110 | None:intergenic | 45.0% | |
| TCCTCCCCTTTGAATAGGTT+TGG | + | chr1.1:58639270-58639289 | None:intergenic | 45.0% | |
| TCGGCATAATACGACACATC+TGG | - | chr1.1:58638717-58638736 | MS.gene07537:intron | 45.0% | |
| TGATGTTCTACAGCTTCCCT+CGG | - | chr1.1:58634835-58634854 | MS.gene07537:CDS | 45.0% | |
| TGCCTTGGAACCATTAGCAA+GGG | + | chr1.1:58637494-58637513 | None:intergenic | 45.0% | |
| TTCCCCTAATTGCCTTGTGT+TGG | + | chr1.1:58638558-58638577 | None:intergenic | 45.0% | |
| TTGAGGACCCCACAAAGATT+TGG | - | chr1.1:58637687-58637706 | MS.gene07537:intron | 45.0% | |
| ! | AAGGGCACAGTGATTGATAG+TGG | - | chr1.1:58634881-58634900 | MS.gene07537:intron | 45.0% |
| ! | ACGCCATATGTGAGCTTTTG+TGG | + | chr1.1:58637930-58637949 | None:intergenic | 45.0% |
| ! | GAAAGATTGGACTGGACGAA+AGG | - | chr1.1:58637824-58637843 | MS.gene07537:intron | 45.0% |
| ! | GCTCATTGCTGCAGTGTTTT+TGG | - | chr1.1:58637151-58637170 | MS.gene07537:intron | 45.0% |
| !! | ACGATGATGGAGCCAGATTA+GGG | - | chr1.1:58639184-58639203 | MS.gene07537:intron | 45.0% |
| !! | ACGTTTGACACGTGTTTTGG+AGG | - | chr1.1:58637090-58637109 | MS.gene07537:intron | 45.0% |
| !! | AGGAAGTATCCCATTCAGTG+TGG | + | chr1.1:58639014-58639033 | None:intergenic | 45.0% |
| !! | ATTGCCTTGTGTTGGCTTTG+AGG | + | chr1.1:58638550-58638569 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1.1:58638454-58638473 | MS.gene07537:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1.1:58638457-58638476 | None:intergenic | 45.0% |
| !! | TAACCTTGCAGTGTTGATGG+TGG | - | chr1.1:58635947-58635966 | MS.gene07537:intron | 45.0% |
| !! | TTGCCTTGTGTTGGCTTTGA+GGG | + | chr1.1:58638549-58638568 | None:intergenic | 45.0% |
| AAAAGACGTTCGGAGTGTGG+AGG | + | chr1.1:58636960-58636979 | None:intergenic | 50.0% | |
| AAGGAGCTCGTTTACACCGA+TGG | + | chr1.1:58638129-58638148 | None:intergenic | 50.0% | |
| ACACAAAACACCTGGGACCT+GGG | + | chr1.1:58636187-58636206 | None:intergenic | 50.0% | |
| AGGAGCTCGTTTACACCGAT+AGG | + | chr1.1:58638128-58638147 | None:intergenic | 50.0% | |
| AGGAGCTCGTTTACACCGAT+GGG | + | chr1.1:58638128-58638147 | None:intergenic | 50.0% | |
| ATATGGCGTGAGCCATAACC+CGG | - | chr1.1:58637941-58637960 | MS.gene07537:intron | 50.0% | |
| ATTGAAAGCCCGCCAAAGCA+AGG | + | chr1.1:58638925-58638944 | None:intergenic | 50.0% | |
| CACCCTTGCTAATGGTTCCA+AGG | - | chr1.1:58637489-58637508 | MS.gene07537:intron | 50.0% | |
| CCAAAAAGACGTTCGGAGTG+TGG | + | chr1.1:58636963-58636982 | None:intergenic | 50.0% | |
| CCAAAATGAGCCAAAGTGGC+TGG | + | chr1.1:58637344-58637363 | None:intergenic | 50.0% | |
| CTGTGTATACCCCCTTGCTT+TGG | - | chr1.1:58638910-58638929 | MS.gene07537:intron | 50.0% | |
| GGGGAAGATCGCAATAAAGG+TGG | - | chr1.1:58638572-58638591 | MS.gene07537:CDS | 50.0% | |
| GGTTCCAAGGCACAAGTTAC+TGG | - | chr1.1:58637502-58637521 | MS.gene07537:intron | 50.0% | |
| GTCACTGGTATCGCATCACA+AGG | - | chr1.1:58637180-58637199 | MS.gene07537:intron | 50.0% | |
| GTCGCAAATGTACGCTCAGA+AGG | + | chr1.1:58637004-58637023 | None:intergenic | 50.0% | |
| GTGCCTTGGAACCATTAGCA+AGG | + | chr1.1:58637495-58637514 | None:intergenic | 50.0% | |
| GTGGGAGATAATCGACAGCA+TGG | - | chr1.1:58639087-58639106 | MS.gene07537:intron | 50.0% | |
| GTGTAAACGAGCTCCTTTCG+AGG | - | chr1.1:58638132-58638151 | MS.gene07537:intron | 50.0% | |
| GTTGGATATCACGCCTCGAA+AGG | + | chr1.1:58638148-58638167 | None:intergenic | 50.0% | |
| TACCATGATTGAGGGGGGTA+TGG | + | chr1.1:58639374-58639393 | None:intergenic | 50.0% | |
| TAGGCTGGTGTCCGATGTAT+TGG | - | chr1.1:58636460-58636479 | MS.gene07537:intron | 50.0% | |
| TGCGCGTTCAGTCTTCGTTT+AGG | - | chr1.1:58636779-58636798 | MS.gene07537:intron | 50.0% | |
| TGGGACAACTTCCAGTGTGT+GGG | - | chr1.1:58637063-58637082 | MS.gene07537:intron | 50.0% | |
| TGTATACCCCCTTGCTTTGG+CGG | - | chr1.1:58638913-58638932 | MS.gene07537:intron | 50.0% | |
| TTGAAAGCCCGCCAAAGCAA+GGG | + | chr1.1:58638924-58638943 | None:intergenic | 50.0% | |
| TTGGGACAACTTCCAGTGTG+TGG | - | chr1.1:58637062-58637081 | MS.gene07537:intron | 50.0% | |
| TTGTGTCGTCACACCGTTGT+TGG | - | chr1.1:58637248-58637267 | MS.gene07537:intron | 50.0% | |
| ! | AAGGGGGTATACACAGCCTA+TGG | + | chr1.1:58638906-58638925 | None:intergenic | 50.0% |
| ! | ACCATGATTGAGGGGGGTAT+GGG | + | chr1.1:58639373-58639392 | None:intergenic | 50.0% |
| ! | ACGAAAGGTACGAAGTTGGC+TGG | - | chr1.1:58637839-58637858 | MS.gene07537:intron | 50.0% |
| ! | CCACACTCCGAACGTCTTTT+TGG | - | chr1.1:58636960-58636979 | MS.gene07537:intron | 50.0% |
| ! | CCCACGTTTGACACGTGTTT+TGG | - | chr1.1:58637087-58637106 | MS.gene07537:intron | 50.0% |
| ! | CTGGACGAAAGGTACGAAGT+TGG | - | chr1.1:58637835-58637854 | MS.gene07537:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+TGG | + | chr1.1:58638527-58638546 | None:intergenic | 50.0% |
| !! | ATGAAAGGGTGTTCAACGGC+AGG | + | chr1.1:58636934-58636953 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1.1:58638459-58638478 | MS.gene07537:intron | 50.0% |
| !! | CCAGCCACTTTGGCTCATTT+TGG | - | chr1.1:58637341-58637360 | MS.gene07537:intron | 50.0% |
| !! | CGATGATGGAGCCAGATTAG+GGG | - | chr1.1:58639185-58639204 | MS.gene07537:intron | 50.0% |
| !! | GACGATGATGGAGCCAGATT+AGG | - | chr1.1:58639183-58639202 | MS.gene07537:intron | 50.0% |
| !! | GCGCATGAAAGGGTGTTCAA+CGG | + | chr1.1:58636938-58636957 | None:intergenic | 50.0% |
| !! | GGTATCTCAGTTGGTGATGG+CGG | + | chr1.1:58636864-58636883 | None:intergenic | 50.0% |
| !! | TGAAAGGGTGTTCAACGGCA+GGG | + | chr1.1:58636933-58636952 | None:intergenic | 50.0% |
| !! | TGCCTTGTGTTGGCTTTGAG+GGG | + | chr1.1:58638548-58638567 | None:intergenic | 50.0% |
| !! | TGCTTTGGCGGGCTTTCAAT+CGG | - | chr1.1:58638925-58638944 | MS.gene07537:intron | 50.0% |
| AACGGCAGGGTTTCAGACGA+TGG | + | chr1.1:58636920-58636939 | None:intergenic | 55.0% | |
| ACACTGCAGCAATGAGCCTC+AGG | + | chr1.1:58637148-58637167 | None:intergenic | 55.0% | |
| ACCCATACCCCCCTCAATCA+TGG | - | chr1.1:58639369-58639388 | MS.gene07537:intron | 55.0% | |
| ACCCCCTCAAAGCCAACACA+AGG | - | chr1.1:58638543-58638562 | MS.gene07537:intron | 55.0% | |
| ACCTGGGTACAGTTCGGAGA+GGG | + | chr1.1:58636171-58636190 | None:intergenic | 55.0% | |
| CAAAGGGGAGGAGATTCTGG+TGG | - | chr1.1:58639278-58639297 | MS.gene07537:intron | 55.0% | |
| CACACAAAACACCTGGGACC+TGG | + | chr1.1:58636188-58636207 | None:intergenic | 55.0% | |
| GATAGACACTGGTGGCCATG+TGG | + | chr1.1:58638952-58638971 | None:intergenic | 55.0% | |
| GATGGAGCCAGATTAGGGGT+AGG | - | chr1.1:58639189-58639208 | MS.gene07537:intron | 55.0% | |
| GATGGCAGATCAGCAGTGTC+CGG | + | chr1.1:58636902-58636921 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | + | chr1.1:58638467-58638486 | None:intergenic | 55.0% | |
| GGGCTTTCAATCGGTCCACA+TGG | - | chr1.1:58638934-58638953 | MS.gene07537:intron | 55.0% | |
| GGTGCTTCGGATCATGTCGT+TGG | - | chr1.1:58637414-58637433 | MS.gene07537:intron | 55.0% | |
| GTATACCCCCTTGCTTTGGC+GGG | - | chr1.1:58638914-58638933 | MS.gene07537:intron | 55.0% | |
| GTTATGGCTCACGCCTCGAA+AGG | + | chr1.1:58638206-58638225 | None:intergenic | 55.0% | |
| TACATCGGACACCAGCCTAG+AGG | + | chr1.1:58636459-58636478 | None:intergenic | 55.0% | |
| TCGTGTGGCGGTATCTCAGT+TGG | + | chr1.1:58636873-58636892 | None:intergenic | 55.0% | |
| TGAAAGCCCGCCAAAGCAAG+GGG | + | chr1.1:58638923-58638942 | None:intergenic | 55.0% | |
| ! | AGGCATAGACGGCTGACTTC+AGG | + | chr1.1:58638054-58638073 | None:intergenic | 55.0% |
| ! | CTGGTGTCCGATGTATTGGC+TGG | - | chr1.1:58636464-58636483 | MS.gene07537:intron | 55.0% |
| ! | GAGTGTGGAGGCGCATGAAA+GGG | + | chr1.1:58636948-58636967 | None:intergenic | 55.0% |
| !! | GCCTTGTGTTGGCTTTGAGG+GGG | + | chr1.1:58638547-58638566 | None:intergenic | 55.0% |
| !! | GGCGGTATCTCAGTTGGTGA+TGG | + | chr1.1:58636867-58636886 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr1.1:58638544-58638563 | None:intergenic | 55.0% |
| AGGCGCTCCTACCCCTAATC+TGG | + | chr1.1:58639199-58639218 | None:intergenic | 60.0% | |
| AGTGTCCGGTCACAGTCGTG+TGG | + | chr1.1:58636888-58636907 | None:intergenic | 60.0% | |
| ATAGGAGAAGGCGAGCCAGC+TGG | + | chr1.1:58637037-58637056 | None:intergenic | 60.0% | |
| CAAACGTGGGACCCACACAC+TGG | + | chr1.1:58637077-58637096 | None:intergenic | 60.0% | |
| CCTGGGACCTGGGTACAGTT+CGG | + | chr1.1:58636177-58636196 | None:intergenic | 60.0% | |
| GAAAGCCCGCCAAAGCAAGG+GGG | + | chr1.1:58638922-58638941 | None:intergenic | 60.0% | |
| GACCTGGGTACAGTTCGGAG+AGG | + | chr1.1:58636172-58636191 | None:intergenic | 60.0% | |
| GGCGAGCCAGCTGGAACAAA+CGG | + | chr1.1:58637028-58637047 | None:intergenic | 60.0% | |
| TACCGCCACACGACTGTGAC+CGG | - | chr1.1:58636880-58636899 | MS.gene07537:intron | 60.0% | |
| TCCCTCTCCGAACTGTACCC+AGG | - | chr1.1:58636167-58636186 | MS.gene07537:intron | 60.0% | |
| TCGAGGCGTGAGCCATAACC+CGG | - | chr1.1:58638207-58638226 | MS.gene07537:intron | 60.0% | |
| ! | GGAGTGTGGAGGCGCATGAA+AGG | + | chr1.1:58636949-58636968 | None:intergenic | 60.0% |
| AAATCCCGCCCCGAGCGTGA+GGG | + | chr1.1:58638613-58638632 | None:intergenic | 65.0% | |
| AACACACCCCCTCACGCTCG+GGG | - | chr1.1:58638602-58638621 | MS.gene07537:CDS | 65.0% | |
| CAACACACCCCCTCACGCTC+GGG | - | chr1.1:58638601-58638620 | MS.gene07537:CDS | 65.0% | |
| CCAACACACCCCCTCACGCT+CGG | - | chr1.1:58638600-58638619 | MS.gene07537:CDS | 65.0% | |
| CCGAACTGTACCCAGGTCCC+AGG | - | chr1.1:58636174-58636193 | MS.gene07537:intron | 65.0% | |
| GCGACGCCGTTTGTTCCAGC+TGG | - | chr1.1:58637019-58637038 | MS.gene07537:intron | 65.0% | |
| GTCCGGTCACAGTCGTGTGG+CGG | + | chr1.1:58636885-58636904 | None:intergenic | 65.0% | |
| AATCCCGCCCCGAGCGTGAG+GGG | + | chr1.1:58638612-58638631 | None:intergenic | 70.0% | |
| GAAATCCCGCCCCGAGCGTG+AGG | + | chr1.1:58638614-58638633 | None:intergenic | 70.0% | |
| ! | CCGAGCGTGAGGGGGTGTGT+TGG | + | chr1.1:58638603-58638622 | None:intergenic | 70.0% |
| ACACCCCCTCACGCTCGGGG+CGG | - | chr1.1:58638605-58638624 | MS.gene07537:CDS | 75.0% | |
| ATCCCGCCCCGAGCGTGAGG+GGG | + | chr1.1:58638611-58638630 | None:intergenic | 75.0% | |
| ! | CACCCCCTCACGCTCGGGGC+GGG | - | chr1.1:58638606-58638625 | MS.gene07537:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58634793 | 58639815 | 58634793 | ID=MS.gene07537 |
| chr1.1 | mRNA | 58634793 | 58639815 | 58634793 | ID=MS.gene07537.t1;Parent=MS.gene07537 |
| chr1.1 | exon | 58639653 | 58639815 | 58639653 | ID=MS.gene07537.t1.exon1;Parent=MS.gene07537.t1 |
| chr1.1 | CDS | 58639653 | 58639815 | 58639653 | ID=cds.MS.gene07537.t1;Parent=MS.gene07537.t1 |
| chr1.1 | exon | 58639507 | 58639580 | 58639507 | ID=MS.gene07537.t1.exon2;Parent=MS.gene07537.t1 |
| chr1.1 | CDS | 58639507 | 58639580 | 58639507 | ID=cds.MS.gene07537.t1;Parent=MS.gene07537.t1 |
| chr1.1 | exon | 58638560 | 58638650 | 58638560 | ID=MS.gene07537.t1.exon3;Parent=MS.gene07537.t1 |
| chr1.1 | CDS | 58638560 | 58638650 | 58638560 | ID=cds.MS.gene07537.t1;Parent=MS.gene07537.t1 |
| chr1.1 | exon | 58638070 | 58638145 | 58638070 | ID=MS.gene07537.t1.exon4;Parent=MS.gene07537.t1 |
| chr1.1 | CDS | 58638070 | 58638145 | 58638070 | ID=cds.MS.gene07537.t1;Parent=MS.gene07537.t1 |
| chr1.1 | exon | 58634793 | 58634864 | 58634793 | ID=MS.gene07537.t1.exon5;Parent=MS.gene07537.t1 |
| chr1.1 | CDS | 58634793 | 58634864 | 58634793 | ID=cds.MS.gene07537.t1;Parent=MS.gene07537.t1 |
| Gene Sequence |
| Protein sequence |
