Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07592.t1 | XP_003590905.1 | 99.6 | 986 | 4 | 0 | 1 | 986 | 1 | 986 | 0.00E+00 | 1139 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07592.t1 | Q9M8Y0 | 87.0 | 971 | 121 | 2 | 21 | 986 | 7 | 977 | 1.6e-257 | 890.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07592.t1 | G7I5N5 | 99.6 | 986 | 4 | 0 | 1 | 986 | 1 | 986 | 0.0e+00 | 1139.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050105 | MS.gene07592 | 0.80203 | 6.81E-49 | -1.69E-46 |
MS.gene051122 | MS.gene07592 | 0.828179 | 1.04E-54 | -1.69E-46 |
MS.gene051126 | MS.gene07592 | 0.807455 | 5.01E-50 | -1.69E-46 |
MS.gene060850 | MS.gene07592 | 0.811474 | 6.87E-51 | -1.69E-46 |
MS.gene060851 | MS.gene07592 | 0.822649 | 2.12E-53 | -1.69E-46 |
MS.gene060852 | MS.gene07592 | 0.824855 | 6.44E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97109 | MS.gene07592 | PPI |
MS.gene40223 | MS.gene07592 | PPI |
MS.gene07592 | MS.gene93890 | PPI |
MS.gene07592 | MS.gene93994 | PPI |
MS.gene23932 | MS.gene07592 | PPI |
MS.gene07592 | MS.gene69092 | PPI |
MS.gene07592 | MS.gene93993 | PPI |
MS.gene014576 | MS.gene07592 | PPI |
MS.gene071051 | MS.gene07592 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07592.t1 | MTR_1g079510 | 99.594 | 986 | 4 | 0 | 1 | 986 | 1 | 986 | 0.0 | 2061 |
MS.gene07592.t1 | MTR_1g059610 | 27.730 | 815 | 510 | 14 | 178 | 970 | 96 | 853 | 1.14e-83 | 290 |
MS.gene07592.t1 | MTR_1g059610 | 30.904 | 343 | 189 | 3 | 148 | 442 | 98 | 440 | 5.35e-40 | 160 |
MS.gene07592.t1 | MTR_1g045490 | 23.411 | 299 | 196 | 2 | 140 | 431 | 201 | 473 | 3.16e-12 | 71.2 |
MS.gene07592.t1 | MTR_5g016190 | 22.179 | 257 | 200 | 0 | 246 | 502 | 289 | 545 | 6.54e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07592.t1 | AT3G04240 | 81.977 | 971 | 170 | 2 | 21 | 986 | 7 | 977 | 0.0 | 1709 |
MS.gene07592.t1 | AT3G04240 | 85.081 | 744 | 111 | 0 | 243 | 986 | 1 | 744 | 0.0 | 1378 |
MS.gene07592.t1 | AT3G04240 | 32.362 | 309 | 200 | 2 | 175 | 474 | 1 | 309 | 3.23e-41 | 163 |
MS.gene07592.t1 | AT3G04240 | 33.103 | 290 | 194 | 0 | 74 | 363 | 2 | 291 | 1.10e-40 | 161 |
MS.gene07592.t1 | AT3G11540 | 27.590 | 830 | 524 | 15 | 177 | 985 | 92 | 865 | 1.46e-79 | 278 |
MS.gene07592.t1 | AT3G11540 | 31.549 | 355 | 183 | 5 | 141 | 442 | 90 | 437 | 3.58e-39 | 158 |
MS.gene07592.t1 | AT3G11540 | 32.830 | 265 | 171 | 1 | 116 | 373 | 172 | 436 | 1.57e-34 | 143 |
MS.gene07592.t1 | AT3G11540 | 26.480 | 321 | 213 | 5 | 239 | 545 | 50 | 361 | 1.45e-19 | 95.1 |
MS.gene07592.t1 | AT3G11540 | 28.346 | 254 | 168 | 4 | 78 | 317 | 196 | 449 | 6.39e-19 | 93.2 |
MS.gene07592.t1 | AT3G11540 | 28.700 | 223 | 149 | 3 | 295 | 510 | 41 | 260 | 6.05e-16 | 83.6 |
MS.gene07592.t1 | AT3G11540 | 25.816 | 705 | 447 | 16 | 295 | 985 | 41 | 683 | 8.57e-51 | 192 |
MS.gene07592.t1 | AT3G11540 | 31.694 | 183 | 113 | 2 | 198 | 373 | 77 | 254 | 1.62e-16 | 85.1 |
MS.gene07592.t1 | AT3G11540 | 31.176 | 170 | 103 | 3 | 177 | 339 | 92 | 254 | 1.72e-13 | 75.5 |
MS.gene07592.t1 | AT3G11540 | 26.540 | 211 | 143 | 2 | 239 | 442 | 50 | 255 | 1.12e-11 | 69.3 |
MS.gene07592.t1 | AT3G11540 | 31.250 | 192 | 103 | 6 | 141 | 317 | 90 | 267 | 4.25e-11 | 67.4 |
MS.gene07592.t1 | AT2G32450 | 28.713 | 202 | 136 | 2 | 180 | 373 | 245 | 446 | 1.21e-14 | 79.0 |
MS.gene07592.t1 | AT2G32450 | 27.976 | 168 | 121 | 0 | 196 | 363 | 303 | 470 | 7.23e-13 | 73.2 |
MS.gene07592.t1 | AT2G32450 | 24.481 | 241 | 174 | 1 | 199 | 431 | 230 | 470 | 8.96e-13 | 73.2 |
MS.gene07592.t1 | AT1G05150 | 24.206 | 252 | 165 | 1 | 180 | 431 | 250 | 475 | 3.43e-13 | 74.3 |
MS.gene07592.t1 | AT1G05150 | 25.094 | 267 | 172 | 2 | 248 | 512 | 250 | 490 | 1.32e-12 | 72.4 |
MS.gene07592.t1 | AT5G63200 | 21.594 | 389 | 231 | 10 | 117 | 434 | 218 | 603 | 2.17e-11 | 68.2 |
Find 239 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATCCTTATCAACCTTAA+TGG | 0.143162 | 1.2:+61951309 | MS.gene07592:CDS |
GGCTGAAGCTCATGCTAATT+TGG | 0.170309 | 1.2:+61948481 | MS.gene07592:CDS |
AAATGATGTTACAGGTAATT+TGG | 0.170385 | 1.2:+61947341 | MS.gene07592:intron |
TTTGGAAGCTTACAATAATT+TGG | 0.173624 | 1.2:+61947443 | MS.gene07592:CDS |
TGACCATGCATCAGCAAAAT+TGG | 0.177023 | 1.2:-61944798 | None:intergenic |
TACCATGTATTAAATATTTC+AGG | 0.201953 | 1.2:-61953001 | None:intergenic |
CCACAGGAACAGATATATTA+TGG | 0.228996 | 1.2:+61953658 | MS.gene07592:CDS |
CAATGCTTGCTCTGGAAATT+AGG | 0.230192 | 1.2:+61950670 | MS.gene07592:CDS |
ACCAGTTCAAGTTTCATATA+TGG | 0.238851 | 1.2:+61952538 | MS.gene07592:CDS |
TACTCTGCCTCTTGAGAAAA+TGG | 0.256247 | 1.2:+61953698 | MS.gene07592:CDS |
CTACCTTTGTATAACCATTA+AGG | 0.273432 | 1.2:-61951323 | None:intergenic |
TAATTTGGCTTCTGCCTATA+AGG | 0.274347 | 1.2:+61948496 | MS.gene07592:CDS |
ATTAGCATACCTATCCTTAT+AGG | 0.292089 | 1.2:-61948510 | None:intergenic |
CCAAACTATGGCATGGCTTA+TGG | 0.303947 | 1.2:+61946547 | MS.gene07592:CDS |
TGCCGAGTGTTACGGTAATA+TGG | 0.304813 | 1.2:+61944076 | MS.gene07592:CDS |
CATGTATATATTTCCAAGAT+TGG | 0.315239 | 1.2:-61947929 | None:intergenic |
TAACCTCCCTCCTGCTTGAT+TGG | 0.315790 | 1.2:-61950867 | None:intergenic |
TCAGTTAGAGCTTGAAGCTT+TGG | 0.317430 | 1.2:-61953983 | None:intergenic |
GTTTCATATATGGGATTTCC+TGG | 0.320555 | 1.2:+61952548 | MS.gene07592:CDS |
CCAGTTCAAGTTTCATATAT+GGG | 0.320872 | 1.2:+61952539 | MS.gene07592:CDS |
CTCTGTATTTCCACTGGACT+GGG | 0.331322 | 1.2:+61953741 | MS.gene07592:CDS |
AATAGTAAAATTACCATTAG+AGG | 0.332566 | 1.2:-61944899 | None:intergenic |
AGAAGATTGCAAGTTGCTTC+AGG | 0.349834 | 1.2:-61948907 | None:intergenic |
TCCTATGTCTATTTATCATC+TGG | 0.352528 | 1.2:-61954245 | None:intergenic |
CTCCATTCAGTACCATCATT+TGG | 0.353434 | 1.2:-61951195 | None:intergenic |
CAGTTAGAGCTTGAAGCTTT+GGG | 0.354805 | 1.2:-61953982 | None:intergenic |
GATCGTTTGGGCTGACAGTT+TGG | 0.362406 | 1.2:-61952914 | None:intergenic |
AAACAGAGGCAATACTTATA+AGG | 0.364549 | 1.2:+61948394 | MS.gene07592:CDS |
CTTCAGACACGGCCAAACTA+TGG | 0.368387 | 1.2:+61946535 | MS.gene07592:CDS |
CCTGATGCATACTTGAACCT+TGG | 0.368615 | 1.2:+61946353 | MS.gene07592:CDS |
CTCTTGAAATTTCCTGCAGC+AGG | 0.374684 | 1.2:+61953172 | MS.gene07592:CDS |
CAATCTTCTACATACACTTC+AGG | 0.378736 | 1.2:+61948921 | MS.gene07592:CDS |
CCACAAGCGTTGACCAATCT+TGG | 0.379245 | 1.2:+61947916 | MS.gene07592:CDS |
CTTTGTAAACGATTATAAAC+AGG | 0.383696 | 1.2:+61952766 | MS.gene07592:CDS |
ATTATAGCAAGGTTGTTATA+CGG | 0.385320 | 1.2:-61948109 | None:intergenic |
TATAACCATTAAGGTTGATA+AGG | 0.388324 | 1.2:-61951314 | None:intergenic |
ATAGGAGCAGGATGGCTAAA+TGG | 0.389099 | 1.2:-61950843 | None:intergenic |
ACTTGCTATCAACCCTCTAA+TGG | 0.389345 | 1.2:+61944886 | MS.gene07592:CDS |
AAATCTTGCTGGTCTGTTCA+TGG | 0.391501 | 1.2:+61945924 | MS.gene07592:CDS |
CAGCCCAAACGATCAGATTA+TGG | 0.392917 | 1.2:+61952923 | MS.gene07592:CDS |
ACTCTGTATTTCCACTGGAC+TGG | 0.395288 | 1.2:+61953740 | MS.gene07592:CDS |
CCATAAGCCATGCCATAGTT+TGG | 0.399981 | 1.2:-61946547 | None:intergenic |
CCAAGGTTCAAGTATGCATC+AGG | 0.403218 | 1.2:-61946353 | None:intergenic |
CAAATGTTCAAGGAAGTAGA+AGG | 0.411950 | 1.2:+61950458 | MS.gene07592:CDS |
ACATTATGAGCAAGGTCAAC+TGG | 0.412081 | 1.2:+61947371 | MS.gene07592:CDS |
GCTGGTCTGTTCATGGAGTC+TGG | 0.413134 | 1.2:+61945931 | MS.gene07592:CDS |
CTTCACAGATGTTGCAATGA+AGG | 0.419095 | 1.2:+61953463 | MS.gene07592:CDS |
CTATTACTTGATTGCCATTG+AGG | 0.423798 | 1.2:+61944256 | MS.gene07592:CDS |
GAGACCATAATCTGATCGTT+TGG | 0.428281 | 1.2:-61952927 | None:intergenic |
CTCTTGAGAAAATGGCTACT+AGG | 0.429756 | 1.2:+61953706 | MS.gene07592:CDS |
ATTGCATGGTCAAATCTTGC+TGG | 0.431271 | 1.2:+61945913 | MS.gene07592:CDS |
CAAGATTGGTCAACGCTTGT+GGG | 0.432953 | 1.2:-61947915 | None:intergenic |
TTGGCTCATCCGACAGCTCT+CGG | 0.434068 | 1.2:+61943389 | MS.gene07592:CDS |
ATGCTATGGCATGGAAAGGC+TGG | 0.434506 | 1.2:-61950635 | None:intergenic |
ATCTGAAACAGAGCACTTTG+TGG | 0.435863 | 1.2:+61951230 | MS.gene07592:CDS |
CCTTGGTGCAATTTATTACC+AGG | 0.442505 | 1.2:+61943875 | MS.gene07592:CDS |
GACCATGCATCAGCAAAATT+GGG | 0.445415 | 1.2:-61944797 | None:intergenic |
CCAAGATTGGTCAACGCTTG+TGG | 0.445603 | 1.2:-61947916 | None:intergenic |
AAAATGGCTACTAGGGTTGC+TGG | 0.449044 | 1.2:+61953714 | MS.gene07592:CDS |
CTGATGCATACTTGAACCTT+GGG | 0.451840 | 1.2:+61946354 | MS.gene07592:CDS |
AACCACCACTCTCAGCTTGT+TGG | 0.452650 | 1.2:+61943370 | MS.gene07592:CDS |
GAACGGTTCAACGCGATCTC+CGG | 0.452834 | 1.2:-61943422 | None:intergenic |
ACCAAGGAGTAGTAAATTAT+CGG | 0.453046 | 1.2:-61943859 | None:intergenic |
ACCTTGCTCATAATGTATAC+TGG | 0.453921 | 1.2:-61947364 | None:intergenic |
CACAGGAACAGATATATTAT+GGG | 0.455571 | 1.2:+61953659 | MS.gene07592:CDS |
CCCATATATGAAACTTGAAC+TGG | 0.456705 | 1.2:-61952539 | None:intergenic |
CTTTCAGATGCTGCTGCACA+AGG | 0.457171 | 1.2:+61953419 | MS.gene07592:intron |
GACCTCATTGTAGCAAGATA+TGG | 0.458721 | 1.2:-61948336 | None:intergenic |
AGCAGTGTGCAGCATATTTG+CGG | 0.459706 | 1.2:-61950791 | None:intergenic |
GGCAATACTTATAAGGAGAT+TGG | 0.459746 | 1.2:+61948401 | MS.gene07592:CDS |
ATGGGATTTCCTGGCACAAC+CGG | 0.462984 | 1.2:+61952557 | MS.gene07592:CDS |
CCCTCCTGCTTGATTGGAAT+AGG | 0.463550 | 1.2:-61950861 | None:intergenic |
CGCGCTCATGATTCTAGTGA+AGG | 0.464261 | 1.2:+61943487 | MS.gene07592:CDS |
AGACCATAATCTGATCGTTT+GGG | 0.464870 | 1.2:-61952926 | None:intergenic |
TAATGCAGTGTGTCTGTTGT+TGG | 0.467039 | 1.2:+61950423 | MS.gene07592:intron |
CGGAATCATGATCTCCGTCC+AGG | 0.468061 | 1.2:+61943324 | None:intergenic |
GGCTCACTCTGTATTTCCAC+TGG | 0.472212 | 1.2:+61953735 | MS.gene07592:CDS |
CGACGACGGCTCTTGCTTAA+CGG | 0.473736 | 1.2:-61943446 | None:intergenic |
CAAGAGCCAAAGCGCGCTGT+TGG | 0.474016 | 1.2:-61953155 | None:intergenic |
ACTTGACCCAATGCTTGCTC+TGG | 0.474813 | 1.2:+61950662 | MS.gene07592:CDS |
CCACACTTTGCCGAGTGTTA+CGG | 0.474939 | 1.2:+61944068 | MS.gene07592:CDS |
AGCTCTCGGTTGCCGTTCAC+CGG | 0.478100 | 1.2:+61943403 | MS.gene07592:CDS |
TAGAGTCAGTGATGCTATCC+AGG | 0.479729 | 1.2:+61948424 | MS.gene07592:CDS |
CCACCCATTGTCACATCTCA+TGG | 0.482380 | 1.2:+61951028 | MS.gene07592:CDS |
AAGAGCCAAAGCGCGCTGTT+GGG | 0.483592 | 1.2:-61953154 | None:intergenic |
TATGAAACTTGAACTGGTGC+AGG | 0.484055 | 1.2:-61952533 | None:intergenic |
ACCGATAATTTACTACTCCT+TGG | 0.486401 | 1.2:+61943858 | MS.gene07592:CDS |
GTAATCTATGTATGTAGCTC+CGG | 0.486466 | 1.2:-61952576 | None:intergenic |
GGTTATGAAAGACTAAGGAT+TGG | 0.487687 | 1.2:+61950885 | MS.gene07592:CDS |
GATTACTGTCAGGCCTACTA+TGG | 0.493816 | 1.2:+61948460 | MS.gene07592:CDS |
GGTTGATGCTCATAGTAACT+TGG | 0.496415 | 1.2:+61945073 | MS.gene07592:intron |
AGCTACATACATAGATTACT+TGG | 0.496829 | 1.2:+61952580 | MS.gene07592:CDS |
CTTCAATCAACTTTACAAGA+TGG | 0.496856 | 1.2:+61952976 | MS.gene07592:CDS |
GCATGAGCTTCAGCCATAGT+AGG | 0.497608 | 1.2:-61948473 | None:intergenic |
CAAAGTAGCAATGCGGGAGA+TGG | 0.497765 | 1.2:-61952748 | None:intergenic |
TTCAGATGCTGCTGCACAAG+GGG | 0.497876 | 1.2:+61953421 | MS.gene07592:intron |
TAATTTCCAGAGCAAGCATT+GGG | 0.501643 | 1.2:-61950668 | None:intergenic |
TATGTAGCTCCGGTTGTGCC+AGG | 0.502858 | 1.2:-61952566 | None:intergenic |
GTTATGAAAGACTAAGGATT+GGG | 0.503729 | 1.2:+61950886 | MS.gene07592:CDS |
TCTGTGAAGATAATTTGATC+AGG | 0.505192 | 1.2:-61953449 | None:intergenic |
AGTCTCATTTCTCCTGCTGC+AGG | 0.505262 | 1.2:-61953184 | None:intergenic |
TGCTTGATTGGAATAGGAGC+AGG | 0.506321 | 1.2:-61950855 | None:intergenic |
TAATCGCACGTATGTAATCC+TGG | 0.506548 | 1.2:-61948442 | None:intergenic |
GGCTCTTGCTTAACGGCGAA+CGG | 0.508387 | 1.2:-61943439 | None:intergenic |
GGTCCTCCGCATTGATCCCT+TGG | 0.509269 | 1.2:+61948355 | MS.gene07592:CDS |
ATTGATCCCTTGGCAGCTGA+TGG | 0.509463 | 1.2:+61948365 | MS.gene07592:CDS |
AATGCAGTGTGTCTGTTGTT+GGG | 0.510745 | 1.2:+61950424 | MS.gene07592:intron |
GGCAGACCTTGTAATACTGC+AGG | 0.511471 | 1.2:-61945969 | None:intergenic |
GGTAATCTAATGAAAGCTCA+AGG | 0.514812 | 1.2:+61945095 | MS.gene07592:CDS |
TGCTATAATATATAAGCAGC+AGG | 0.515077 | 1.2:+61948123 | MS.gene07592:CDS |
GCATGGAAAGGCTGGACACT+AGG | 0.517313 | 1.2:-61950627 | None:intergenic |
CGTTTACAAAGTAGCAATGC+GGG | 0.517564 | 1.2:-61952754 | None:intergenic |
CAATCTTGGAAATATATACA+TGG | 0.519958 | 1.2:+61947930 | MS.gene07592:CDS |
TGCTATCGTATCTGATGTCA+TGG | 0.520898 | 1.2:-61951262 | None:intergenic |
TACAAGACCATCAGCTGCCA+AGG | 0.521518 | 1.2:-61948372 | None:intergenic |
ACACATTAGACGGAGTTCCT+TGG | 0.522719 | 1.2:+61953490 | MS.gene07592:CDS |
GTGTACCCAACAGCGCGCTT+TGG | 0.522743 | 1.2:+61953149 | MS.gene07592:CDS |
ATCAAGAATACATACCTCAA+TGG | 0.523924 | 1.2:-61944270 | None:intergenic |
GGCAATAACGTGAGCGACGA+CGG | 0.526386 | 1.2:-61943460 | None:intergenic |
CTAATTTCCAGAGCAAGCAT+TGG | 0.530198 | 1.2:-61950669 | None:intergenic |
AACCTACCTTTGCTATTGCA+TGG | 0.530684 | 1.2:+61945899 | MS.gene07592:CDS |
TTCACAGATGTTGCAATGAA+GGG | 0.531625 | 1.2:+61953464 | MS.gene07592:CDS |
CAGAGCCCTGCAGTATTACA+AGG | 0.533229 | 1.2:+61945963 | MS.gene07592:CDS |
CTGTATTTCCACTGGACTGG+GGG | 0.534881 | 1.2:+61953743 | MS.gene07592:CDS |
AGTACCATCATTTGGACTCA+AGG | 0.534981 | 1.2:-61951187 | None:intergenic |
CTCTCTTTGACACAAACCGA+TGG | 0.535023 | 1.2:+61954035 | MS.gene07592:CDS |
TGGCTTCTGCCTATAAGGAT+AGG | 0.535459 | 1.2:+61948501 | MS.gene07592:CDS |
TTGGAAATATATACATGGAA+TGG | 0.538270 | 1.2:+61947935 | MS.gene07592:CDS |
AGGGAGGTTATGAAAGACTA+AGG | 0.540074 | 1.2:+61950880 | MS.gene07592:CDS |
AAGAACATACATTATAGCAC+TGG | 0.540515 | 1.2:-61947779 | None:intergenic |
TCTTGAGAAAATGGCTACTA+GGG | 0.544333 | 1.2:+61953707 | MS.gene07592:CDS |
ATGTGGAATCTGCATTGCTC+TGG | 0.546367 | 1.2:+61954176 | MS.gene07592:CDS |
CTAGAATCATGAGCGCGTAA+AGG | 0.548037 | 1.2:-61943481 | None:intergenic |
GTGGTATGTGCATTGCATAA+AGG | 0.548073 | 1.2:-61953639 | None:intergenic |
GCCAGTATACATTATGAGCA+AGG | 0.548161 | 1.2:+61947363 | MS.gene07592:CDS |
TGCTCCTATTCCAATCAAGC+AGG | 0.555496 | 1.2:+61950857 | MS.gene07592:CDS |
TTTCAGATGCTGCTGCACAA+GGG | 0.555667 | 1.2:+61953420 | MS.gene07592:intron |
ATAGTAAAATTACCATTAGA+GGG | 0.557033 | 1.2:-61944898 | None:intergenic |
GGTAATGCTCTGAAAGATGT+TGG | 0.562829 | 1.2:+61947738 | MS.gene07592:CDS |
ATTATGGGCAGGTCTGCCTA+TGG | 0.564345 | 1.2:+61953674 | MS.gene07592:CDS |
GGAACAGATATATTATGGGC+AGG | 0.566521 | 1.2:+61953663 | MS.gene07592:CDS |
TGGGTCAAGTGGATATGCTA+TGG | 0.567625 | 1.2:-61950649 | None:intergenic |
TGCCATATTACCGTAACACT+CGG | 0.568106 | 1.2:-61944078 | None:intergenic |
TGAGCAAGGTCAACTGGACA+TGG | 0.570022 | 1.2:+61947377 | MS.gene07592:CDS |
AGAGCAAGCATTGGGTCAAG+TGG | 0.574030 | 1.2:-61950660 | None:intergenic |
ACATACGTGCGATTACTGTC+AGG | 0.575634 | 1.2:+61948450 | MS.gene07592:CDS |
GGCTGTAAAGAGCTACAGAC+AGG | 0.576286 | 1.2:+61948861 | MS.gene07592:CDS |
GCTACACTAAATGTAACCAC+TGG | 0.577805 | 1.2:+61948076 | MS.gene07592:CDS |
ATCTGCATTGCTCTGGTCAA+CGG | 0.578259 | 1.2:+61954183 | MS.gene07592:CDS |
TTATTTCAGTGGACATGTAG+AGG | 0.579165 | 1.2:+61948837 | MS.gene07592:intron |
GGTGGTTGTAGTGGTGGCGA+TGG | 0.580159 | 1.2:-61943354 | None:intergenic |
ATCCTGAAATATTTAATACA+TGG | 0.581813 | 1.2:+61952999 | MS.gene07592:CDS |
GGGAGGAGATGATTGTCAGC+AGG | 0.582027 | 1.2:+61953763 | MS.gene07592:CDS |
GGATCGTGATCAAATGTTCA+AGG | 0.582624 | 1.2:+61950448 | MS.gene07592:CDS |
GTTGATGCTCATAGTAACTT+GGG | 0.583189 | 1.2:+61945074 | MS.gene07592:CDS |
AAGTATGCATCAGGGAAGGA+AGG | 0.583668 | 1.2:-61946344 | None:intergenic |
GAACCTTGGGAATGTATACA+AGG | 0.587196 | 1.2:+61946367 | MS.gene07592:CDS |
TACGCATGTATGCACTAGCT+AGG | 0.587484 | 1.2:-61944823 | None:intergenic |
GCTAGTGCATACATGCGTAA+AGG | 0.588429 | 1.2:+61944827 | MS.gene07592:CDS |
GGTGGCGATGGTGATCTCCC+TGG | 0.590906 | 1.2:-61943342 | None:intergenic |
ATCCCATGAGATGTGACAAT+GGG | 0.592439 | 1.2:-61951031 | None:intergenic |
AGATTACTTGGTCACTGATG+AGG | 0.592637 | 1.2:+61952592 | MS.gene07592:CDS |
TAGATATGTGCATACTGAAG+AGG | 0.593648 | 1.2:-61952710 | None:intergenic |
TCAAGAGGCAGAGTAACCAT+AGG | 0.593677 | 1.2:-61953690 | None:intergenic |
GTCAACGCTTGTGGGTGGTT+AGG | 0.593743 | 1.2:-61947907 | None:intergenic |
TCAGTGACCTTAAAATGCTG+TGG | 0.594451 | 1.2:-61954206 | None:intergenic |
CAAGTGGATATGCTATGGCA+TGG | 0.594989 | 1.2:-61950644 | None:intergenic |
CAACCTTAATGGTTATACAA+AGG | 0.596920 | 1.2:+61951320 | MS.gene07592:CDS |
ATCAACATGCTCTTCAGACA+CGG | 0.597820 | 1.2:+61946524 | MS.gene07592:CDS |
AGCAGGAGAAATGAGACTGA+GGG | 0.597842 | 1.2:+61953189 | MS.gene07592:CDS |
GGTGGTTAGGCTGTAACGAA+AGG | 0.598171 | 1.2:-61947894 | None:intergenic |
GTTTGTGTCAAAGAGAGGAC+AGG | 0.598476 | 1.2:-61954029 | None:intergenic |
TGAAGGGTGAACACATTAGA+CGG | 0.599057 | 1.2:+61953480 | MS.gene07592:CDS |
GCTGAGAGTGGTGGTTGTAG+TGG | 0.599298 | 1.2:-61943363 | None:intergenic |
TAATATGGCAAATGCATGGA+AGG | 0.599920 | 1.2:+61944091 | MS.gene07592:CDS |
TCAACGCGATCTCCGGTGAA+CGG | 0.601206 | 1.2:-61943415 | None:intergenic |
GAACGGCAACCGAGAGCTGT+CGG | 0.601559 | 1.2:-61943398 | None:intergenic |
TTACCTTGTATACATTCCCA+AGG | 0.606164 | 1.2:-61946370 | None:intergenic |
CCATAATATATCTGTTCCTG+TGG | 0.606701 | 1.2:-61953658 | None:intergenic |
CACCCATTGTCACATCTCAT+GGG | 0.607132 | 1.2:+61951029 | MS.gene07592:CDS |
TCTGTATTTCCACTGGACTG+GGG | 0.607244 | 1.2:+61953742 | MS.gene07592:CDS |
GCTGCTTATATATTATAGCA+AGG | 0.607657 | 1.2:-61948120 | None:intergenic |
TCCTATTCCAATCAAGCAGG+AGG | 0.607994 | 1.2:+61950860 | MS.gene07592:CDS |
TCTAATGAAAGCTCAAGGGT+TGG | 0.609689 | 1.2:+61945100 | MS.gene07592:CDS |
GCGATGGTGATCTCCCTGGA+CGG | 0.610099 | 1.2:-61943338 | None:intergenic |
ACGGTAATATGGCAAATGCA+TGG | 0.610222 | 1.2:+61944087 | MS.gene07592:CDS |
GATTGGTCAACGCTTGTGGG+TGG | 0.615687 | 1.2:-61947912 | None:intergenic |
GTCCAAATGATGGTACTGAA+TGG | 0.616666 | 1.2:+61951193 | MS.gene07592:CDS |
CCGTAACACTCGGCAAAGTG+TGG | 0.618577 | 1.2:-61944068 | None:intergenic |
ATTTGACCATGCAATAGCAA+AGG | 0.621397 | 1.2:-61945905 | None:intergenic |
TTATGCAATGCACATACCAC+AGG | 0.622011 | 1.2:+61953642 | MS.gene07592:CDS |
GGAATCATGATCTCCGTCCA+GGG | 0.622815 | 1.2:+61943325 | None:intergenic |
GTCAAGAAATAAGTCTGCCA+AGG | 0.623121 | 1.2:-61953507 | None:intergenic |
GTAATCTAATGAAAGCTCAA+GGG | 0.626437 | 1.2:+61945096 | MS.gene07592:CDS |
CATCGGTTTGTGTCAAAGAG+AGG | 0.626631 | 1.2:-61954034 | None:intergenic |
TAACATGCAATAGCTTCTTG+AGG | 0.628478 | 1.2:-61946502 | None:intergenic |
AAATGTTCAAGGAAGTAGAA+GGG | 0.629997 | 1.2:+61950459 | MS.gene07592:CDS |
GAAAGATGTTGGCAGAGTGG+AGG | 0.630480 | 1.2:+61947749 | MS.gene07592:CDS |
GACCATGCAATAGCAAAGGT+AGG | 0.630488 | 1.2:-61945901 | None:intergenic |
TCTCTTTGACACAAACCGAT+GGG | 0.631347 | 1.2:+61954036 | MS.gene07592:CDS |
GCAGACCTTGTAATACTGCA+GGG | 0.633448 | 1.2:-61945968 | None:intergenic |
TGCCATATCTTGCTACAATG+AGG | 0.633633 | 1.2:+61948334 | MS.gene07592:CDS |
GCACATCAAATGTACAAGAG+TGG | 0.634726 | 1.2:+61943777 | MS.gene07592:CDS |
GAGAGTGGTGGTTGTAGTGG+TGG | 0.636309 | 1.2:-61943360 | None:intergenic |
GACACGGCCAAACTATGGCA+TGG | 0.637088 | 1.2:+61946540 | MS.gene07592:CDS |
TATGCACAACAGAAAGAATG+TGG | 0.638579 | 1.2:+61951064 | MS.gene07592:CDS |
ATGAGCCAACAAGCTGAGAG+TGG | 0.640591 | 1.2:-61943375 | None:intergenic |
AGTAAATTATCGGTGCGAAG+CGG | 0.641514 | 1.2:-61943849 | None:intergenic |
AGGTATGTGAGTAGTGACTT+TGG | 0.648824 | 1.2:+61951002 | MS.gene07592:intron |
CAGCAGGAGAAATGAGACTG+AGG | 0.649017 | 1.2:+61953188 | MS.gene07592:CDS |
ACAAGACCATCAGCTGCCAA+GGG | 0.656374 | 1.2:-61948371 | None:intergenic |
GGATATGCTATGGCATGGAA+AGG | 0.659767 | 1.2:-61950639 | None:intergenic |
GTTCAAGTATGCATCAGGGA+AGG | 0.661650 | 1.2:-61946348 | None:intergenic |
CTGCCAAGGGATCAATGCGG+AGG | 0.661848 | 1.2:-61948358 | None:intergenic |
CCTATTCCAATCAAGCAGGA+GGG | 0.662777 | 1.2:+61950861 | MS.gene07592:CDS |
TCAAGTAATAGCGAATTGCA+AGG | 0.664537 | 1.2:-61944244 | None:intergenic |
CCATGAGATGTGACAATGGG+TGG | 0.665060 | 1.2:-61951028 | None:intergenic |
ATTCCAATCAAGCAGGAGGG+AGG | 0.666622 | 1.2:+61950864 | MS.gene07592:CDS |
TATGCCTTGAGTCCAAATGA+TGG | 0.671518 | 1.2:+61951183 | MS.gene07592:CDS |
CAAGGTTCAAGTATGCATCA+GGG | 0.675585 | 1.2:-61946352 | None:intergenic |
GCAGTGTGTCTGTTGTTGGG+AGG | 0.677864 | 1.2:+61950427 | MS.gene07592:intron |
AAATTGTTAATGCAGGAACA+TGG | 0.679005 | 1.2:+61948027 | MS.gene07592:intron |
GGAGCAGGATGGCTAAATGG+TGG | 0.680480 | 1.2:-61950840 | None:intergenic |
CCTGGTAATAAATTGCACCA+AGG | 0.681422 | 1.2:-61943875 | None:intergenic |
GGCATACAGTTGTTACCTCG+AGG | 0.683086 | 1.2:+61945864 | MS.gene07592:intron |
TTTCAGTGGACATGTAGAGG+CGG | 0.686039 | 1.2:+61948840 | MS.gene07592:intron |
AGCCAACAAGCTGAGAGTGG+TGG | 0.690346 | 1.2:-61943372 | None:intergenic |
GATCCCATGAGATGTGACAA+TGG | 0.693395 | 1.2:-61951032 | None:intergenic |
GTTGTATACGCAATGCCTCG+AGG | 0.703270 | 1.2:-61945879 | None:intergenic |
GCTGATGGTCTTGTAAACAG+AGG | 0.706829 | 1.2:+61948380 | MS.gene07592:CDS |
ATACGGTGCAGATAATCCAG+TGG | 0.709165 | 1.2:-61948092 | None:intergenic |
TGATTGGAATAGGAGCAGGA+TGG | 0.709742 | 1.2:-61950851 | None:intergenic |
GCACAACAGAAAGAATGTGG+AGG | 0.713802 | 1.2:+61951067 | MS.gene07592:CDS |
TCGTTTACAAAGTAGCAATG+CGG | 0.715211 | 1.2:-61952755 | None:intergenic |
TCTGAAAGATGTTGGCAGAG+TGG | 0.720915 | 1.2:+61947746 | MS.gene07592:CDS |
TTGTTAATGCAGGAACATGG+TGG | 0.744612 | 1.2:+61948030 | MS.gene07592:intron |
ATCAGATTATGGTCTCCCTG+AGG | 0.756050 | 1.2:+61952934 | MS.gene07592:CDS |
CAGCTGCCAAGGGATCAATG+CGG | 0.837731 | 1.2:-61948361 | None:intergenic |
GATAGCAAAATTGATCAACG+AGG | 0.841690 | 1.2:+61951278 | MS.gene07592:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 61943331 | 61954259 | 61943331 | ID=MS.gene07592 |
chr1.2 | mRNA | 61943331 | 61954259 | 61943331 | ID=MS.gene07592.t1;Parent=MS.gene07592 |
chr1.2 | exon | 61943331 | 61943508 | 61943331 | ID=MS.gene07592.t1.exon1;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61943331 | 61943508 | 61943331 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61943751 | 61943896 | 61943751 | ID=MS.gene07592.t1.exon2;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61943751 | 61943896 | 61943751 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61944014 | 61944112 | 61944014 | ID=MS.gene07592.t1.exon3;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61944014 | 61944112 | 61944014 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61944227 | 61944277 | 61944227 | ID=MS.gene07592.t1.exon4;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61944227 | 61944277 | 61944227 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61944791 | 61944907 | 61944791 | ID=MS.gene07592.t1.exon5;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61944791 | 61944907 | 61944791 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61945074 | 61945130 | 61945074 | ID=MS.gene07592.t1.exon6;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61945074 | 61945130 | 61945074 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61945865 | 61945984 | 61945865 | ID=MS.gene07592.t1.exon7;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61945865 | 61945984 | 61945865 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61946326 | 61946388 | 61946326 | ID=MS.gene07592.t1.exon8;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61946326 | 61946388 | 61946326 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61946490 | 61946568 | 61946490 | ID=MS.gene07592.t1.exon9;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61946490 | 61946568 | 61946490 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61947355 | 61947464 | 61947355 | ID=MS.gene07592.t1.exon10;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61947355 | 61947464 | 61947355 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61947738 | 61947791 | 61947738 | ID=MS.gene07592.t1.exon11;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61947738 | 61947791 | 61947738 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61947889 | 61947956 | 61947889 | ID=MS.gene07592.t1.exon12;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61947889 | 61947956 | 61947889 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61948042 | 61948144 | 61948042 | ID=MS.gene07592.t1.exon13;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61948042 | 61948144 | 61948042 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61948320 | 61948522 | 61948320 | ID=MS.gene07592.t1.exon14;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61948320 | 61948522 | 61948320 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61948846 | 61948942 | 61948846 | ID=MS.gene07592.t1.exon15;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61948846 | 61948942 | 61948846 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61950431 | 61950502 | 61950431 | ID=MS.gene07592.t1.exon16;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61950431 | 61950502 | 61950431 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61950615 | 61950691 | 61950615 | ID=MS.gene07592.t1.exon17;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61950615 | 61950691 | 61950615 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61950791 | 61950907 | 61950791 | ID=MS.gene07592.t1.exon18;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61950791 | 61950907 | 61950791 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61951004 | 61951088 | 61951004 | ID=MS.gene07592.t1.exon19;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61951004 | 61951088 | 61951004 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61951174 | 61951341 | 61951174 | ID=MS.gene07592.t1.exon20;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61951174 | 61951341 | 61951174 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61952503 | 61952613 | 61952503 | ID=MS.gene07592.t1.exon21;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61952503 | 61952613 | 61952503 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61952701 | 61952787 | 61952701 | ID=MS.gene07592.t1.exon22;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61952701 | 61952787 | 61952701 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61952893 | 61953020 | 61952893 | ID=MS.gene07592.t1.exon23;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61952893 | 61953020 | 61952893 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61953132 | 61953214 | 61953132 | ID=MS.gene07592.t1.exon24;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61953132 | 61953214 | 61953132 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61953426 | 61953531 | 61953426 | ID=MS.gene07592.t1.exon25;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61953426 | 61953531 | 61953426 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61953638 | 61953784 | 61953638 | ID=MS.gene07592.t1.exon26;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61953638 | 61953784 | 61953638 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61953937 | 61954057 | 61953937 | ID=MS.gene07592.t1.exon27;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61953937 | 61954057 | 61953937 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
chr1.2 | exon | 61954146 | 61954259 | 61954146 | ID=MS.gene07592.t1.exon28;Parent=MS.gene07592.t1 |
chr1.2 | CDS | 61954146 | 61954259 | 61954146 | ID=cds.MS.gene07592.t1;Parent=MS.gene07592.t1 |
Gene Sequence |
Protein sequence |