Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08242.t1 | XP_003601071.1 | 98 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 1.90E-252 | 881.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08242.t1 | Q680U9 | 74.9 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 4.9e-201 | 701.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08242.t1 | G7J329 | 98.0 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 1.3e-252 | 881.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052519 | MS.gene08242 | 0.814693 | 1.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038754 | MS.gene08242 | PPI |
| MS.gene032967 | MS.gene08242 | PPI |
| MS.gene08242 | MS.gene80729 | PPI |
| MS.gene76435 | MS.gene08242 | PPI |
| MS.gene08242 | MS.gene012032 | PPI |
| MS.gene89597 | MS.gene08242 | PPI |
| MS.gene08242 | MS.gene044565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08242.t1 | MTR_3g072660 | 98.009 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 0.0 | 915 |
| MS.gene08242.t1 | MTR_4g088935 | 96.674 | 451 | 15 | 0 | 1 | 451 | 1 | 451 | 0.0 | 905 |
| MS.gene08242.t1 | MTR_3g072660 | 96.460 | 452 | 8 | 2 | 1 | 451 | 1 | 445 | 0.0 | 894 |
| MS.gene08242.t1 | MTR_3g072660 | 97.917 | 384 | 7 | 1 | 1 | 383 | 1 | 384 | 0.0 | 774 |
| MS.gene08242.t1 | MTR_3g072660 | 96.094 | 384 | 7 | 2 | 1 | 383 | 1 | 377 | 0.0 | 751 |
| MS.gene08242.t1 | MTR_3g072660 | 97.759 | 357 | 7 | 1 | 1 | 356 | 1 | 357 | 0.0 | 717 |
| MS.gene08242.t1 | MTR_3g072660 | 99.083 | 327 | 3 | 0 | 125 | 451 | 1 | 327 | 0.0 | 674 |
| MS.gene08242.t1 | MTR_3g072660 | 96.942 | 327 | 3 | 1 | 125 | 451 | 1 | 320 | 0.0 | 652 |
| MS.gene08242.t1 | MTR_3g072660 | 97.643 | 297 | 6 | 1 | 1 | 296 | 1 | 297 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08242.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 726 |
| MS.gene08242.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 725 |
| MS.gene08242.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 724 |
Find 92 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGAAGAGCTTATGTTTA+AGG | 0.129241 | 3.2:-65452693 | None:intergenic |
| GAGAATGGAATGGTTTATTA+TGG | 0.208075 | 3.2:+65456128 | MS.gene08242:CDS |
| AAGCCACTCTCGGTTAATTT+TGG | 0.210672 | 3.2:-65452880 | None:intergenic |
| TGTAGCTTTCTTACTACTTT+TGG | 0.229854 | 3.2:-65456222 | None:intergenic |
| ACCTGTGCCGGCTAACTTAT+TGG | 0.233617 | 3.2:+65451292 | MS.gene08242:CDS |
| CAAAGTTGCCATTGATAGAT+TGG | 0.301692 | 3.2:+65451349 | MS.gene08242:CDS |
| ATTTCAAAGGAACATAATTA+AGG | 0.304580 | 3.2:+65453380 | MS.gene08242:CDS |
| AATTATGTTCCTTTGAAATT+CGG | 0.328396 | 3.2:-65453376 | None:intergenic |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 3.2:+65450735 | MS.gene08242:CDS |
| CAGGCACTGCTGGTACCCTC+TGG | 0.335293 | 3.2:-65455823 | None:intergenic |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 3.2:-65450743 | None:intergenic |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 3.2:+65455297 | MS.gene08242:CDS |
| AGATTCAAAGAAGATGCTTT+TGG | 0.356097 | 3.2:+65456153 | MS.gene08242:CDS |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 3.2:-65455303 | None:intergenic |
| CACAACTTTGGTACATCATC+AGG | 0.365045 | 3.2:+65453012 | MS.gene08242:CDS |
| GTAGAGTTTATCAAGTTTGA+TGG | 0.368766 | 3.2:-65450779 | None:intergenic |
| TGTGAGGCTCCCAACCTTAG+AGG | 0.379390 | 3.2:+65452412 | MS.gene08242:CDS |
| GGCTAACTTATTGGAGGAAT+GGG | 0.388091 | 3.2:+65451301 | MS.gene08242:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 3.2:+65451269 | MS.gene08242:CDS |
| AGAATGGAATGGTTTATTAT+GGG | 0.397970 | 3.2:+65456129 | MS.gene08242:CDS |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 3.2:+65453416 | MS.gene08242:CDS |
| ATAAGTCTCAAGATCCTCTA+AGG | 0.406525 | 3.2:-65452426 | None:intergenic |
| ACCCATGTACTAAAAGATTC+TGG | 0.421490 | 3.2:-65452016 | None:intergenic |
| TTGTGCTTTGATAGACCATC+TGG | 0.426688 | 3.2:-65451329 | None:intergenic |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 3.2:+65450713 | None:intergenic |
| TAATAAACCATTCCATTCTC+TGG | 0.444435 | 3.2:-65456125 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 3.2:+65455841 | MS.gene08242:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 3.2:+65453397 | MS.gene08242:CDS |
| CTTGATAAACTCTACGAGAA+TGG | 0.454631 | 3.2:+65450787 | MS.gene08242:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 3.2:+65453396 | MS.gene08242:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | 3.2:+65452442 | MS.gene08242:CDS |
| CGGCTAACTTATTGGAGGAA+TGG | 0.464320 | 3.2:+65451300 | MS.gene08242:CDS |
| CCTGTGACTGCGCCAGAGAA+TGG | 0.466571 | 3.2:+65456113 | MS.gene08242:CDS |
| TCCAATAAGTTAGCCGGCAC+AGG | 0.472055 | 3.2:-65451293 | None:intergenic |
| TGCAGATAGTCAGTTTCCTT+CGG | 0.477880 | 3.2:+65455777 | MS.gene08242:intron |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 3.2:-65452398 | None:intergenic |
| TCAAAGTTGCTTACCCTGGA+TGG | 0.478380 | 3.2:-65456004 | None:intergenic |
| AAGGTCTTGTCAACATGACT+TGG | 0.480094 | 3.2:-65452674 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 3.2:+65453564 | MS.gene08242:intron |
| GTCTCAAGATCCTCTAAGGT+TGG | 0.483810 | 3.2:-65452422 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | 3.2:+65452441 | MS.gene08242:CDS |
| TGGATACAAATGCACAACTT+TGG | 0.500692 | 3.2:+65453000 | MS.gene08242:CDS |
| TCTCAAGATCCTCTAAGGTT+GGG | 0.504105 | 3.2:-65452421 | None:intergenic |
| TGAATCATCATCAAGAAAAG+AGG | 0.506736 | 3.2:+65453631 | MS.gene08242:CDS |
| AGTTTATCAAGTTTGATGGC+AGG | 0.511969 | 3.2:-65450775 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 3.2:-65451357 | None:intergenic |
| GTAAACAGAACCTCTGACTC+AGG | 0.517111 | 3.2:-65452739 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.522090 | 3.2:+65450812 | MS.gene08242:CDS |
| AGGCACTGCTGGTACCCTCT+GGG | 0.522718 | 3.2:-65455822 | None:intergenic |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 3.2:+65450741 | MS.gene08242:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | 3.2:+65452433 | MS.gene08242:CDS |
| CCATTCTCTGGCGCAGTCAC+AGG | 0.535410 | 3.2:-65456113 | None:intergenic |
| GTGGTGACAGATTAGGTTGT+GGG | 0.535695 | 3.2:+65455928 | MS.gene08242:intron |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 3.2:+65453401 | MS.gene08242:CDS |
| CAGGAGAGAGGTGTTGATGC+TGG | 0.539060 | 3.2:+65453133 | MS.gene08242:intron |
| GTGTGGCAGGATGTATTTGA+AGG | 0.539271 | 3.2:+65456088 | MS.gene08242:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 3.2:-65452727 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.547217 | 3.2:-65452673 | None:intergenic |
| CATTCCTCCAATAAGTTAGC+CGG | 0.547340 | 3.2:-65451299 | None:intergenic |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 3.2:+65455356 | MS.gene08242:CDS |
| ATTATGACGAGTTCCCATCC+AGG | 0.551997 | 3.2:+65455990 | MS.gene08242:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.556398 | 3.2:-65451248 | None:intergenic |
| TCATCCTCGTGTTGCCCAGA+GGG | 0.558131 | 3.2:+65455808 | MS.gene08242:CDS |
| ACACATTGACCGAATTTCAA+AGG | 0.563272 | 3.2:+65453367 | MS.gene08242:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 3.2:+65454957 | MS.gene08242:CDS |
| CAAAGTTGCTTACCCTGGAT+GGG | 0.570298 | 3.2:-65456003 | None:intergenic |
| ATTCAGTCATGCTCACTGAA+AGG | 0.573028 | 3.2:-65453613 | None:intergenic |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 3.2:-65452383 | None:intergenic |
| TGACTTGATATCATTCATGC+TGG | 0.584712 | 3.2:+65453156 | MS.gene08242:CDS |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 3.2:-65450724 | None:intergenic |
| GGTGGTGACAGATTAGGTTG+TGG | 0.588257 | 3.2:+65455927 | MS.gene08242:intron |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 3.2:+65451280 | MS.gene08242:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 3.2:+65452729 | MS.gene08242:CDS |
| GAGGAATGGGTGCTTCCAGA+TGG | 0.595776 | 3.2:+65451314 | MS.gene08242:CDS |
| GAGGATGAGCATTCTGCCGA+AGG | 0.597208 | 3.2:-65455793 | None:intergenic |
| TGTGCCGGCTAACTTATTGG+AGG | 0.597403 | 3.2:+65451295 | MS.gene08242:CDS |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 3.2:-65453413 | None:intergenic |
| GCTCCAAAATTAACCGAGAG+TGG | 0.597554 | 3.2:+65452877 | MS.gene08242:CDS |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 3.2:+65450744 | MS.gene08242:CDS |
| TTATGACGAGTTCCCATCCA+GGG | 0.606538 | 3.2:+65455991 | MS.gene08242:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 3.2:-65453404 | None:intergenic |
| ACATATTTCTTTGCAAGAGG+CGG | 0.617514 | 3.2:-65451245 | None:intergenic |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | 3.2:+65452445 | MS.gene08242:CDS |
| CTCATCCTCGTGTTGCCCAG+AGG | 0.632190 | 3.2:+65455807 | MS.gene08242:CDS |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 3.2:+65453034 | MS.gene08242:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 3.2:+65452367 | MS.gene08242:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 3.2:+65452366 | MS.gene08242:intron |
| AAACAAAATCAAAATGCCTG+AGG | 0.666803 | 3.2:+65450708 | None:intergenic |
| GGTACCCTCTGGGCAACACG+AGG | 0.671023 | 3.2:-65455812 | None:intergenic |
| ACAACTTTGGTACATCATCA+GGG | 0.674313 | 3.2:+65453013 | MS.gene08242:CDS |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 3.2:+65452396 | MS.gene08242:CDS |
| GACTGCGCCAGAGAATGGAA+TGG | 0.715004 | 3.2:+65456118 | MS.gene08242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAATATAAATGTAG+CGG | + | chr3.2:65454165-65454184 | MS.gene08242:intron | 10.0% |
| !! | GAATAATATACATAATAAAA+AGG | - | chr3.2:65451829-65451848 | None:intergenic | 10.0% |
| !!! | TAATTTTACTTTTTAAATTG+TGG | + | chr3.2:65455402-65455421 | MS.gene08242:intron | 10.0% |
| !!! | TTTTTTTTTACAACTTTATA+GGG | + | chr3.2:65453548-65453567 | MS.gene08242:intron | 10.0% |
| !!! | TTTTTTTTTTACAACTTTAT+AGG | + | chr3.2:65453547-65453566 | MS.gene08242:intron | 10.0% |
| !! | AAATTTAATTAAAAGGAAAG+AGG | - | chr3.2:65454369-65454388 | None:intergenic | 15.0% |
| !! | ATGCTAATGTAAAAAAATAT+AGG | - | chr3.2:65454197-65454216 | None:intergenic | 15.0% |
| !! | ATTAAGACAAATTATTAAAG+TGG | - | chr3.2:65452554-65452573 | None:intergenic | 15.0% |
| !! | ATTTCTGATATTTAGTATTA+TGG | + | chr3.2:65455906-65455925 | MS.gene08242:intron | 15.0% |
| !! | CATATAAATCATAAAATGTT+AGG | + | chr3.2:65451216-65451235 | MS.gene08242:intron | 15.0% |
| !! | TAACTACTTATAAGTTATAA+AGG | - | chr3.2:65455514-65455533 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr3.2:65455644-65455663 | MS.gene08242:intron | 15.0% |
| !!! | AATTTTGTTCATATGTATAT+AGG | + | chr3.2:65454444-65454463 | MS.gene08242:intron | 15.0% |
| !!! | ACATACAATAATATTTTTGA+GGG | - | chr3.2:65455261-65455280 | None:intergenic | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr3.2:65454884-65454903 | MS.gene08242:intron | 15.0% |
| !!! | TACATACAATAATATTTTTG+AGG | - | chr3.2:65455262-65455281 | None:intergenic | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr3.2:65454883-65454902 | MS.gene08242:intron | 15.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | - | chr3.2:65453665-65453684 | None:intergenic | 20.0% |
| !! | AAATATTATTGTATGTATGC+AGG | + | chr3.2:65455265-65455284 | MS.gene08242:intron | 20.0% |
| !! | AAGCAAAGAAAAAAAAGAAT+GGG | - | chr3.2:65453891-65453910 | None:intergenic | 20.0% |
| !! | AATATTATTGTATGTATGCA+GGG | + | chr3.2:65455266-65455285 | MS.gene08242:intron | 20.0% |
| !! | ATATTATATGCCTAATCATT+GGG | - | chr3.2:65453345-65453364 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr3.2:65453298-65453317 | None:intergenic | 20.0% |
| !! | ATTTATATGCATTAAAACCA+CGG | - | chr3.2:65451205-65451224 | None:intergenic | 20.0% |
| !! | ATTTCAAAGGAACATAATTA+AGG | + | chr3.2:65453380-65453399 | MS.gene08242:CDS | 20.0% |
| !! | CATAAAATTGTTAATATGAG+TGG | + | chr3.2:65452118-65452137 | MS.gene08242:intron | 20.0% |
| !! | GTGAAAAAAAATACTAAACT+GGG | - | chr3.2:65451938-65451957 | None:intergenic | 20.0% |
| !! | TATAAGTACAAGATAAATTG+AGG | - | chr3.2:65455148-65455167 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr3.2:65455377-65455396 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr3.2:65453346-65453365 | None:intergenic | 20.0% |
| !! | TTATAGCTGAATTAATAGTT+TGG | - | chr3.2:65455173-65455192 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr3.2:65455210-65455229 | MS.gene08242:intron | 20.0% |
| !! | TTTGAGAGAAATCATAAAAT+GGG | + | chr3.2:65451140-65451159 | MS.gene08242:intron | 20.0% |
| !!! | AACACCAAACAATAATATTT+TGG | - | chr3.2:65455217-65455236 | None:intergenic | 20.0% |
| !!! | AATCTTTTTTTGTTAGTAGA+TGG | + | chr3.2:65454000-65454019 | MS.gene08242:intron | 20.0% |
| !!! | AATTATGTTCCTTTGAAATT+CGG | - | chr3.2:65453379-65453398 | None:intergenic | 20.0% |
| !!! | ATGTATTCTAAAAGAAACAA+AGG | - | chr3.2:65451692-65451711 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCAAATGACAAT+TGG | + | chr3.2:65451505-65451524 | MS.gene08242:intron | 20.0% |
| !!! | TGTATTCTAAAAGAAACAAA+GGG | - | chr3.2:65451691-65451710 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | - | chr3.2:65452251-65452270 | None:intergenic | 20.0% |
| ! | AAAAAGTTCCAAAACAAGAT+TGG | - | chr3.2:65454047-65454066 | None:intergenic | 25.0% |
| ! | AAAAGGAAAGAGGAAATATA+AGG | - | chr3.2:65454359-65454378 | None:intergenic | 25.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr3.2:65452478-65452497 | None:intergenic | 25.0% |
| ! | AAACTCAAATAAGTACTTGT+GGG | + | chr3.2:65451114-65451133 | MS.gene08242:intron | 25.0% |
| ! | AAAGAGATTTAGCAAAAATC+AGG | - | chr3.2:65451661-65451680 | None:intergenic | 25.0% |
| ! | ACTTAAAGCAAATTCAAGAA+CGG | - | chr3.2:65451763-65451782 | None:intergenic | 25.0% |
| ! | AGAATGGAATGGTTTATTAT+GGG | + | chr3.2:65456129-65456148 | MS.gene08242:CDS | 25.0% |
| ! | ATTATGTCTTCAAAACGAAA+AGG | + | chr3.2:65454389-65454408 | MS.gene08242:intron | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr3.2:65453299-65453318 | None:intergenic | 25.0% |
| ! | GAAGCAAAGAAAAAAAAGAA+TGG | - | chr3.2:65453892-65453911 | None:intergenic | 25.0% |
| ! | GGTGAAAAAAAATACTAAAC+TGG | - | chr3.2:65451939-65451958 | None:intergenic | 25.0% |
| ! | GTTTGAGAGAAATCATAAAA+TGG | + | chr3.2:65451139-65451158 | MS.gene08242:intron | 25.0% |
| ! | TAAACTCAAATAAGTACTTG+TGG | + | chr3.2:65451113-65451132 | MS.gene08242:intron | 25.0% |
| ! | TACAGAAAACTAATGTTTGT+TGG | + | chr3.2:65454658-65454677 | MS.gene08242:intron | 25.0% |
| ! | TATTATATGCCTAATCATTG+GGG | - | chr3.2:65453344-65453363 | None:intergenic | 25.0% |
| ! | TCTGATATTTAGTATTATGG+TGG | + | chr3.2:65455909-65455928 | MS.gene08242:intron | 25.0% |
| ! | TGTACAGATTAAACAAAAAG+TGG | - | chr3.2:65452493-65452512 | None:intergenic | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr3.2:65454010-65454029 | MS.gene08242:intron | 25.0% |
| ! | TTAACTCATAATACGTGATA+TGG | - | chr3.2:65452159-65452178 | None:intergenic | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr3.2:65451269-65451288 | MS.gene08242:CDS | 25.0% |
| !! | ACAACTTGAATGTTTGATTT+AGG | + | chr3.2:65452318-65452337 | MS.gene08242:intron | 25.0% |
| !! | ATGACTATTATACAGCATTT+TGG | - | chr3.2:65452227-65452246 | None:intergenic | 25.0% |
| !! | GAATTTGCTTTAAGTTAATG+AGG | + | chr3.2:65451768-65451787 | MS.gene08242:intron | 25.0% |
| !! | GTATTCTAAAAGAAACAAAG+GGG | - | chr3.2:65451690-65451709 | None:intergenic | 25.0% |
| !! | TATTCTAAAAGAAACAAAGG+GGG | - | chr3.2:65451689-65451708 | None:intergenic | 25.0% |
| !! | TCAATTTGAGATTTGATATG+TGG | + | chr3.2:65455558-65455577 | MS.gene08242:intron | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr3.2:65455484-65455503 | MS.gene08242:intron | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr3.2:65455339-65455358 | MS.gene08242:CDS | 25.0% |
| !! | TTGTCTTCTTTTTCTATTCA+TGG | + | chr3.2:65452054-65452073 | MS.gene08242:intron | 25.0% |
| !!! | AAAACAAATTTTTGAGACAC+CGG | - | chr3.2:65453779-65453798 | None:intergenic | 25.0% |
| !!! | AACAAGGTTTTATCACAAAA+AGG | - | chr3.2:65451595-65451614 | None:intergenic | 25.0% |
| !!! | AATACTATCCAATCTTGTTT+TGG | + | chr3.2:65454036-65454055 | MS.gene08242:intron | 25.0% |
| !!! | ATTTTGGTCCTATAATTTCA+AGG | - | chr3.2:65452211-65452230 | None:intergenic | 25.0% |
| AAACATGACAAAAGACTAGA+GGG | - | chr3.2:65455046-65455065 | None:intergenic | 30.0% | |
| AACAAAGTCATTGGAGATTT+AGG | - | chr3.2:65452616-65452635 | None:intergenic | 30.0% | |
| AACACATATTTCTTTGCAAG+AGG | - | chr3.2:65451251-65451270 | None:intergenic | 30.0% | |
| AATAGCTTACTATACTCCTT+CGG | - | chr3.2:65455539-65455558 | None:intergenic | 30.0% | |
| AATCAAAAAAGCCATAACAG+GGG | - | chr3.2:65456055-65456074 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr3.2:65454957-65454976 | MS.gene08242:CDS | 30.0% | |
| ACATCATTAAAAATGTGTGG+AGG | + | chr3.2:65453925-65453944 | MS.gene08242:intron | 30.0% | |
| ACTAAACTGGGATAAAACAA+GGG | - | chr3.2:65451926-65451945 | None:intergenic | 30.0% | |
| AGTGAAGGTTATTCAAATGA+AGG | - | chr3.2:65455598-65455617 | None:intergenic | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr3.2:65454755-65454774 | MS.gene08242:intron | 30.0% | |
| ATAGCAGAAACATATAGAGA+AGG | - | chr3.2:65453076-65453095 | None:intergenic | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr3.2:65455306-65455325 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr3.2:65454593-65454612 | MS.gene08242:intron | 30.0% | |
| ATGTACCTTAATAGCAACAA+GGG | - | chr3.2:65452101-65452120 | None:intergenic | 30.0% | |
| CAAAGAAGAGCTTATGTTTA+AGG | - | chr3.2:65452696-65452715 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr3.2:65455297-65455316 | MS.gene08242:CDS | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr3.2:65451360-65451379 | None:intergenic | 30.0% | |
| CAGTATTTGATGTCACAATT+TGG | + | chr3.2:65451793-65451812 | MS.gene08242:intron | 30.0% | |
| CTACTTAAACAAGTACTTGT+GGG | - | chr3.2:65451092-65451111 | None:intergenic | 30.0% | |
| GAATCAAAAAAGCCATAACA+GGG | - | chr3.2:65456056-65456075 | None:intergenic | 30.0% | |
| GAGAATGGAATGGTTTATTA+TGG | + | chr3.2:65456128-65456147 | MS.gene08242:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr3.2:65453034-65453053 | MS.gene08242:CDS | 30.0% | |
| GTAGAGTTTATCAAGTTTGA+TGG | - | chr3.2:65450782-65450801 | None:intergenic | 30.0% | |
| TAACAAACCTATATAGACGA+TGG | + | chr3.2:65452176-65452195 | MS.gene08242:intron | 30.0% | |
| TAATAAACCATTCCATTCTC+TGG | - | chr3.2:65456128-65456147 | None:intergenic | 30.0% | |
| TACTAAACTGGGATAAAACA+AGG | - | chr3.2:65451927-65451946 | None:intergenic | 30.0% | |
| TATGTACCTTAATAGCAACA+AGG | - | chr3.2:65452102-65452121 | None:intergenic | 30.0% | |
| TCATAATACGTGATATGGAA+GGG | - | chr3.2:65452154-65452173 | None:intergenic | 30.0% | |
| TCTACTTAAACAAGTACTTG+TGG | - | chr3.2:65451093-65451112 | None:intergenic | 30.0% | |
| TGAATCATCATCAAGAAAAG+AGG | + | chr3.2:65453631-65453650 | MS.gene08242:CDS | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr3.2:65452939-65452958 | None:intergenic | 30.0% | |
| TGGTTACTCCTTGAAATTAT+AGG | + | chr3.2:65452200-65452219 | MS.gene08242:intron | 30.0% | |
| TTATCGAAACATGACCTTAA+TGG | - | chr3.2:65450873-65450892 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr3.2:65455587-65455606 | None:intergenic | 30.0% | |
| TTTATCGTTGCAATGTGTAA+TGG | - | chr3.2:65454806-65454825 | None:intergenic | 30.0% | |
| ! | ACATTTTTAATGATGTGCCA+AGG | - | chr3.2:65453921-65453940 | None:intergenic | 30.0% |
| ! | ACTTGAATGTTTGATTTAGG+TGG | + | chr3.2:65452321-65452340 | MS.gene08242:intron | 30.0% |
| ! | AGATTCAAAGAAGATGCTTT+TGG | + | chr3.2:65456153-65456172 | MS.gene08242:CDS | 30.0% |
| ! | ATACGGTTTAGATGATCTTT+TGG | + | chr3.2:65454484-65454503 | MS.gene08242:intron | 30.0% |
| ! | CTTTGATGAAAATTTTCCAG+CGG | + | chr3.2:65452711-65452730 | MS.gene08242:CDS | 30.0% |
| ! | GTTTTCTGTAAGTTGTAGTA+TGG | - | chr3.2:65454648-65454667 | None:intergenic | 30.0% |
| ! | TACGGTTTAGATGATCTTTT+GGG | + | chr3.2:65454485-65454504 | MS.gene08242:intron | 30.0% |
| ! | TCCAGAATCTTTTAGTACAT+GGG | + | chr3.2:65452015-65452034 | MS.gene08242:CDS | 30.0% |
| ! | TTTTTACAACTTTATAGGGC+AGG | + | chr3.2:65453552-65453571 | MS.gene08242:intron | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr3.2:65454969-65454988 | MS.gene08242:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr3.2:65453179-65453198 | MS.gene08242:CDS | 30.0% |
| !!! | AAACTGGAAGTTGTTTTTCA+TGG | + | chr3.2:65455104-65455123 | MS.gene08242:intron | 30.0% |
| !!! | AGGTTTGTTGCTAATTTTGT+TGG | - | chr3.2:65453596-65453615 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTCACCTTCTTGC+AGG | + | chr3.2:65451946-65451965 | MS.gene08242:intron | 30.0% |
| !!! | GAAGTTGTTTTTCATGGAAT+AGG | + | chr3.2:65455110-65455129 | MS.gene08242:intron | 30.0% |
| !!! | TGATTTTTTCCCCAATGATT+AGG | + | chr3.2:65453332-65453351 | MS.gene08242:intron | 30.0% |
| AAAAAGAATGGGACACTTGT+CGG | - | chr3.2:65453880-65453899 | None:intergenic | 35.0% | |
| AAACCTATATAGACGATGGT+TGG | + | chr3.2:65452180-65452199 | MS.gene08242:intron | 35.0% | |
| AACAAAGACACACAAAGATG+TGG | - | chr3.2:65451853-65451872 | None:intergenic | 35.0% | |
| ACAACTTTGGTACATCATCA+GGG | + | chr3.2:65453013-65453032 | MS.gene08242:CDS | 35.0% | |
| ACACATTGACCGAATTTCAA+AGG | + | chr3.2:65453367-65453386 | MS.gene08242:CDS | 35.0% | |
| ACATATTTCTTTGCAAGAGG+CGG | - | chr3.2:65451248-65451267 | None:intergenic | 35.0% | |
| ACCCATGTACTAAAAGATTC+TGG | - | chr3.2:65452019-65452038 | None:intergenic | 35.0% | |
| AGATGCAGAATGATCTAACT+TGG | + | chr3.2:65453484-65453503 | MS.gene08242:intron | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr3.2:65452401-65452420 | None:intergenic | 35.0% | |
| AGGTCTTTCAACACATTACA+AGG | - | chr3.2:65451575-65451594 | None:intergenic | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr3.2:65454604-65454623 | MS.gene08242:intron | 35.0% | |
| ATAAGTCTCAAGATCCTCTA+AGG | - | chr3.2:65452429-65452448 | None:intergenic | 35.0% | |
| ATAGCTTACTATACTCCTTC+GGG | - | chr3.2:65455538-65455557 | None:intergenic | 35.0% | |
| ATCAGTTTGAACCATTTCAG+AGG | - | chr3.2:65451483-65451502 | None:intergenic | 35.0% | |
| ATTTGATGCGTACCAAAAAC+TGG | - | chr3.2:65452906-65452925 | None:intergenic | 35.0% | |
| CAAAGTTGCCATTGATAGAT+TGG | + | chr3.2:65451349-65451368 | MS.gene08242:CDS | 35.0% | |
| CAACTTATGGGCATATCATA+AGG | + | chr3.2:65451041-65451060 | MS.gene08242:intron | 35.0% | |
| CACATGCAACAGATAAAACA+AGG | - | chr3.2:65451611-65451630 | None:intergenic | 35.0% | |
| CCTTAGTTTAGGCTAACATT+TGG | - | chr3.2:65451531-65451550 | None:intergenic | 35.0% | |
| CTCATAATACGTGATATGGA+AGG | - | chr3.2:65452155-65452174 | None:intergenic | 35.0% | |
| CTTATAAGTAGTTATCCCGA+AGG | + | chr3.2:65455520-65455539 | MS.gene08242:intron | 35.0% | |
| CTTCCAGTTTCAATTTCCAT+AGG | - | chr3.2:65455094-65455113 | None:intergenic | 35.0% | |
| CTTCCTATGGAAATTGAAAC+TGG | + | chr3.2:65455088-65455107 | MS.gene08242:intron | 35.0% | |
| CTTGATAAACTCTACGAGAA+TGG | + | chr3.2:65450787-65450806 | MS.gene08242:CDS | 35.0% | |
| GAAACATGACAAAAGACTAG+AGG | - | chr3.2:65455047-65455066 | None:intergenic | 35.0% | |
| GATACTCATACAACACTTGT+TGG | + | chr3.2:65453848-65453867 | MS.gene08242:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr3.2:65450735-65450754 | MS.gene08242:CDS | 35.0% | |
| GATGTATAAGACAGTGAACA+GGG | - | chr3.2:65454337-65454356 | None:intergenic | 35.0% | |
| GCATTGCAGAAAATATTTGG+TGG | - | chr3.2:65454999-65455018 | None:intergenic | 35.0% | |
| GGAATCAAAAAAGCCATAAC+AGG | - | chr3.2:65456057-65456076 | None:intergenic | 35.0% | |
| GGCACATCATTAAAAATGTG+TGG | + | chr3.2:65453922-65453941 | MS.gene08242:intron | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | - | chr3.2:65453844-65453863 | None:intergenic | 35.0% | |
| TAACCAACCATCGTCTATAT+AGG | - | chr3.2:65452186-65452205 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr3.2:65452649-65452668 | None:intergenic | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | - | chr3.2:65453838-65453857 | None:intergenic | 35.0% | |
| TCTGTAAGTTGTAGTATGGA+CGG | - | chr3.2:65454644-65454663 | None:intergenic | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr3.2:65454754-65454773 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr3.2:65453156-65453175 | MS.gene08242:CDS | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr3.2:65452396-65452415 | MS.gene08242:CDS | 35.0% | |
| TGGATACAAATGCACAACTT+TGG | + | chr3.2:65453000-65453019 | MS.gene08242:CDS | 35.0% | |
| TTACCGCAAAACAAAGTCAT+TGG | - | chr3.2:65452625-65452644 | None:intergenic | 35.0% | |
| TTAGCCTAAACTAAGGAGTT+TGG | + | chr3.2:65451535-65451554 | MS.gene08242:intron | 35.0% | |
| TTCACGTAGAATTTCAGTGA+AGG | - | chr3.2:65455613-65455632 | None:intergenic | 35.0% | |
| TTGCTATGAATTACAGCTGA+TGG | + | chr3.2:65452980-65452999 | MS.gene08242:intron | 35.0% | |
| TTTCTCAATGCCTACCATTA+AGG | + | chr3.2:65450856-65450875 | MS.gene08242:intron | 35.0% | |
| TTTGCACTCTGTCATATATG+TGG | + | chr3.2:65452794-65452813 | MS.gene08242:intron | 35.0% | |
| ! | ACGGTTTAGATGATCTTTTG+GGG | + | chr3.2:65454486-65454505 | MS.gene08242:intron | 35.0% |
| ! | AGTTTATCAAGTTTGATGGC+AGG | - | chr3.2:65450778-65450797 | None:intergenic | 35.0% |
| ! | CCAAATGTTAGCCTAAACTA+AGG | + | chr3.2:65451528-65451547 | MS.gene08242:intron | 35.0% |
| ! | CTCCAGAATCTTTTAGTACA+TGG | + | chr3.2:65452014-65452033 | MS.gene08242:CDS | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr3.2:65454580-65454599 | MS.gene08242:intron | 35.0% |
| ! | GACAATTTATGCCTCTGAAA+TGG | + | chr3.2:65451469-65451488 | MS.gene08242:intron | 35.0% |
| ! | GATTCCTTATGTCATTTGTG+TGG | + | chr3.2:65456071-65456090 | MS.gene08242:intron | 35.0% |
| ! | TATTATGGTGGTGACAGATT+AGG | + | chr3.2:65455921-65455940 | MS.gene08242:intron | 35.0% |
| ! | TTCAAAGAAGATGCTTTTGG+TGG | + | chr3.2:65456156-65456175 | MS.gene08242:CDS | 35.0% |
| ! | TTGTTCCCTTGTTGCTATTA+AGG | + | chr3.2:65452093-65452112 | MS.gene08242:intron | 35.0% |
| ! | TTTTTGTTGAAGCTCTTGAC+AGG | + | chr3.2:65451384-65451403 | MS.gene08242:CDS | 35.0% |
| !! | AATGGTAGGCATTGAGAAAT+AGG | - | chr3.2:65450855-65450874 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr3.2:65453178-65453197 | MS.gene08242:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr3.2:65453180-65453199 | MS.gene08242:CDS | 35.0% |
| !!! | TCTCCAATGACTTTGTTTTG+CGG | + | chr3.2:65452619-65452638 | MS.gene08242:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr3.2:65454898-65454917 | MS.gene08242:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+TGG | + | chr3.2:65453708-65453727 | MS.gene08242:intron | 40.0% | |
| AATAAGCTGCGAGCAACTTA+TGG | + | chr3.2:65451028-65451047 | MS.gene08242:intron | 40.0% | |
| ACAAGGGTCGAAAGTGAAAA+TGG | - | chr3.2:65451910-65451929 | None:intergenic | 40.0% | |
| AGAATCAAAGTTGCTTACCC+TGG | - | chr3.2:65456011-65456030 | None:intergenic | 40.0% | |
| AGGAAGTTCCAAAACCCAAA+GGG | - | chr3.2:65455074-65455093 | None:intergenic | 40.0% | |
| ATAAGCTGCGAGCAACTTAT+GGG | + | chr3.2:65451029-65451048 | MS.gene08242:intron | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | + | chr3.2:65454255-65454274 | MS.gene08242:intron | 40.0% | |
| ATTCAGTCATGCTCACTGAA+AGG | - | chr3.2:65453616-65453635 | None:intergenic | 40.0% | |
| ATTGTGGTACTCACTCTAGA+TGG | + | chr3.2:65455418-65455437 | MS.gene08242:intron | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr3.2:65450744-65450763 | MS.gene08242:CDS | 40.0% | |
| CACAACTTTGGTACATCATC+AGG | + | chr3.2:65453012-65453031 | MS.gene08242:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr3.2:65450746-65450765 | None:intergenic | 40.0% | |
| CACGTTCTTGTGGTTGAATA+TGG | + | chr3.2:65452347-65452366 | MS.gene08242:intron | 40.0% | |
| CATGTCAATCGTTCATTGGT+TGG | + | chr3.2:65454759-65454778 | MS.gene08242:intron | 40.0% | |
| CATTCCTCCAATAAGTTAGC+CGG | - | chr3.2:65451302-65451321 | None:intergenic | 40.0% | |
| CGAAACATGACCTTAATGGT+AGG | - | chr3.2:65450869-65450888 | None:intergenic | 40.0% | |
| GGATGTATAAGACAGTGAAC+AGG | - | chr3.2:65454338-65454357 | None:intergenic | 40.0% | |
| GGCTAACTTATTGGAGGAAT+GGG | + | chr3.2:65451301-65451320 | MS.gene08242:CDS | 40.0% | |
| GTGTCCAAACTCCTTAGTTT+AGG | - | chr3.2:65451542-65451561 | None:intergenic | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | + | chr3.2:65454256-65454275 | MS.gene08242:intron | 40.0% | |
| TAGGAAGTTCCAAAACCCAA+AGG | - | chr3.2:65455075-65455094 | None:intergenic | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr3.2:65453564-65453583 | MS.gene08242:intron | 40.0% | |
| TATGAAGCATGGACACCTAA+AGG | + | chr3.2:65453719-65453738 | MS.gene08242:intron | 40.0% | |
| TGCAGATAGTCAGTTTCCTT+CGG | + | chr3.2:65455777-65455796 | MS.gene08242:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr3.2:65450741-65450760 | MS.gene08242:CDS | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | - | chr3.2:65454256-65454275 | None:intergenic | 40.0% | |
| TTGTGCTTTGATAGACCATC+TGG | - | chr3.2:65451332-65451351 | None:intergenic | 40.0% | |
| ! | AAGCCACTCTCGGTTAATTT+TGG | - | chr3.2:65452883-65452902 | None:intergenic | 40.0% |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr3.2:65452677-65452696 | None:intergenic | 40.0% |
| ! | ACAAGTACTTGTGGGCTATT+TGG | - | chr3.2:65451084-65451103 | None:intergenic | 40.0% |
| ! | ACCTGATCTGTGACATTTTC+AGG | - | chr3.2:65455845-65455864 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr3.2:65452676-65452695 | None:intergenic | 40.0% |
| ! | CATCAGTCTGAAGTAGTAAC+AGG | - | chr3.2:65454730-65454749 | None:intergenic | 40.0% |
| ! | CGGTTTAGATGATCTTTTGG+GGG | + | chr3.2:65454487-65454506 | MS.gene08242:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr3.2:65453183-65453202 | MS.gene08242:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr3.2:65453108-65453127 | MS.gene08242:intron | 40.0% |
| ! | TTTTCGTTCTTCCTGCAAGA+AGG | - | chr3.2:65451960-65451979 | None:intergenic | 40.0% |
| !! | AGACTTATGCTCTGGAACAA+TGG | + | chr3.2:65452441-65452460 | MS.gene08242:CDS | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | + | chr3.2:65452442-65452461 | MS.gene08242:CDS | 40.0% |
| !! | TAGATGATCTTTTGGGGGAA+GGG | + | chr3.2:65454492-65454511 | MS.gene08242:intron | 40.0% |
| !! | TCTCAAGATCCTCTAAGGTT+GGG | - | chr3.2:65452424-65452443 | None:intergenic | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr3.2:65452386-65452405 | None:intergenic | 40.0% |
| !! | TTAGATGATCTTTTGGGGGA+AGG | + | chr3.2:65454491-65454510 | MS.gene08242:intron | 40.0% |
| !!! | TTGGGTTTTGGAACTTCCTA+TGG | + | chr3.2:65455075-65455094 | MS.gene08242:intron | 40.0% |
| AGGCAATGTTGATCAACGAG+GGG | + | chr3.2:65453945-65453964 | MS.gene08242:intron | 45.0% | |
| AGTTCCAAAACCCAAAGGGA+AGG | - | chr3.2:65455070-65455089 | None:intergenic | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr3.2:65453396-65453415 | MS.gene08242:CDS | 45.0% | |
| ATTATGACGAGTTCCCATCC+AGG | + | chr3.2:65455990-65456009 | MS.gene08242:CDS | 45.0% | |
| CAAAAACTGGAAGCCACTCT+CGG | - | chr3.2:65452893-65452912 | None:intergenic | 45.0% | |
| CAAAGTTGCTTACCCTGGAT+GGG | - | chr3.2:65456006-65456025 | None:intergenic | 45.0% | |
| CCTGCCACACAAATGACATA+AGG | - | chr3.2:65456078-65456097 | None:intergenic | 45.0% | |
| CGGCTAACTTATTGGAGGAA+TGG | + | chr3.2:65451300-65451319 | MS.gene08242:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+CGG | + | chr3.2:65453735-65453754 | MS.gene08242:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr3.2:65453420-65453439 | MS.gene08242:intron | 45.0% | |
| CTTGTGGTTGAATATGGCAG+TGG | + | chr3.2:65452353-65452372 | MS.gene08242:intron | 45.0% | |
| GAGGCAATGTTGATCAACGA+GGG | + | chr3.2:65453944-65453963 | MS.gene08242:intron | 45.0% | |
| GCATGGACACCTAAAGGATT+AGG | + | chr3.2:65453725-65453744 | MS.gene08242:intron | 45.0% | |
| GCCTGAAAATGTCACAGATC+AGG | + | chr3.2:65455841-65455860 | MS.gene08242:CDS | 45.0% | |
| GCTCCAAAATTAACCGAGAG+TGG | + | chr3.2:65452877-65452896 | MS.gene08242:CDS | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | + | chr3.2:65452433-65452452 | MS.gene08242:CDS | 45.0% | |
| GGGCTATTTGGAAGAGCTTA+TGG | - | chr3.2:65451072-65451091 | None:intergenic | 45.0% | |
| GTAAACAGAACCTCTGACTC+AGG | - | chr3.2:65452742-65452761 | None:intergenic | 45.0% | |
| GTCATGTTTCCCTTCCCTTT+GGG | + | chr3.2:65455057-65455076 | MS.gene08242:intron | 45.0% | |
| GTCTTACGTATCCCCTGTTA+TGG | + | chr3.2:65456041-65456060 | MS.gene08242:intron | 45.0% | |
| GTGTCCATGCTTCATAGCTA+AGG | - | chr3.2:65453715-65453734 | None:intergenic | 45.0% | |
| GTGTGGCAGGATGTATTTGA+AGG | + | chr3.2:65456088-65456107 | MS.gene08242:intron | 45.0% | |
| GTTCCAAAACCCAAAGGGAA+GGG | - | chr3.2:65455069-65455088 | None:intergenic | 45.0% | |
| TAGGTGGTAACACGTTCTTG+TGG | + | chr3.2:65452337-65452356 | MS.gene08242:intron | 45.0% | |
| TCAAAGTTGCTTACCCTGGA+TGG | - | chr3.2:65456007-65456026 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr3.2:65450812-65450831 | MS.gene08242:CDS | 45.0% | |
| TGTCATGTTTCCCTTCCCTT+TGG | + | chr3.2:65455056-65455075 | MS.gene08242:intron | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr3.2:65453224-65453243 | None:intergenic | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr3.2:65453397-65453416 | MS.gene08242:CDS | 45.0% | |
| TTATGACGAGTTCCCATCCA+GGG | + | chr3.2:65455991-65456010 | MS.gene08242:CDS | 45.0% | |
| TTCTTTGCTTCGACACACCT+TGG | + | chr3.2:65453901-65453920 | MS.gene08242:intron | 45.0% | |
| TTCTTTGCTTCGACACTCGT+TGG | + | chr3.2:65453804-65453823 | MS.gene08242:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr3.2:65450727-65450746 | None:intergenic | 45.0% | |
| ! | CCTTATGTCATTTGTGTGGC+AGG | + | chr3.2:65456075-65456094 | MS.gene08242:intron | 45.0% |
| ! | GTGGTGACAGATTAGGTTGT+GGG | + | chr3.2:65455928-65455947 | MS.gene08242:intron | 45.0% |
| !! | AGATGATCTTTTGGGGGAAG+GGG | + | chr3.2:65454493-65454512 | MS.gene08242:intron | 45.0% |
| !! | CGTTCATTGGTTGGCTTTAG+TGG | + | chr3.2:65454768-65454787 | MS.gene08242:intron | 45.0% |
| !! | GTCTCAAGATCCTCTAAGGT+TGG | - | chr3.2:65452425-65452444 | None:intergenic | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr3.2:65453114-65453133 | MS.gene08242:intron | 45.0% |
| !! | TTATGCTCTGGAACAATGGG+AGG | + | chr3.2:65452445-65452464 | MS.gene08242:CDS | 45.0% |
| !! | TTTCCCTTCCCTTTGGGTTT+TGG | + | chr3.2:65455063-65455082 | MS.gene08242:intron | 45.0% |
| !!! | TGAGTTTTGAATGTGCTCCG+TGG | + | chr3.2:65451185-65451204 | MS.gene08242:intron | 45.0% |
| !! | ACATAATAAATTTAATTAAA+AGG | - | chr3.2:65454376-65454395 | None:intergenic | 5.0% |
| !! | AGTATATATTTAATTATATA+CGG | + | chr3.2:65454467-65454486 | MS.gene08242:intron | 5.0% |
| CAATGGCATTACAGCAGACC+AGG | + | chr3.2:65455356-65455375 | MS.gene08242:CDS | 50.0% | |
| CGTGACACGCCTAATCCTTT+AGG | - | chr3.2:65453737-65453756 | None:intergenic | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | - | chr3.2:65454264-65454283 | None:intergenic | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | + | chr3.2:65454259-65454278 | MS.gene08242:intron | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | + | chr3.2:65454262-65454281 | MS.gene08242:intron | 50.0% | |
| GGAGGCAATGTTGATCAACG+AGG | + | chr3.2:65453943-65453962 | MS.gene08242:intron | 50.0% | |
| GGCAATGTTGATCAACGAGG+GGG | + | chr3.2:65453946-65453965 | MS.gene08242:intron | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr3.2:65453416-65453435 | None:intergenic | 50.0% | |
| TCCAATAAGTTAGCCGGCAC+AGG | - | chr3.2:65451296-65451315 | None:intergenic | 50.0% | |
| TGCTTCGACACTCGTTGGAT+CGG | + | chr3.2:65453809-65453828 | MS.gene08242:intron | 50.0% | |
| ! | CGAGAGTGGCTTCCAGTTTT+TGG | + | chr3.2:65452891-65452910 | MS.gene08242:CDS | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr3.2:65451280-65451299 | MS.gene08242:CDS | 50.0% |
| ! | GGTGGTGACAGATTAGGTTG+TGG | + | chr3.2:65455927-65455946 | MS.gene08242:intron | 50.0% |
| !! | ACCTGTGCCGGCTAACTTAT+TGG | + | chr3.2:65451292-65451311 | MS.gene08242:CDS | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr3.2:65453121-65453140 | MS.gene08242:intron | 50.0% |
| !! | GCTTTTGGTGGTCAAGTCTG+AGG | + | chr3.2:65456168-65456187 | MS.gene08242:CDS | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr3.2:65455836-65455855 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr3.2:65453416-65453435 | MS.gene08242:CDS | 50.0% |
| !! | TGTGCCGGCTAACTTATTGG+AGG | + | chr3.2:65451295-65451314 | MS.gene08242:CDS | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr3.2:65452366-65452385 | MS.gene08242:intron | 55.0% | |
| CGACGTGTCAATGTCGTGTC+AGG | + | chr3.2:65454220-65454239 | MS.gene08242:intron | 55.0% | |
| GACTGCGCCAGAGAATGGAA+TGG | + | chr3.2:65456118-65456137 | MS.gene08242:CDS | 55.0% | |
| GAGGAATGGGTGCTTCCAGA+TGG | + | chr3.2:65451314-65451333 | MS.gene08242:CDS | 55.0% | |
| GAGGATGAGCATTCTGCCGA+AGG | - | chr3.2:65455796-65455815 | None:intergenic | 55.0% | |
| TCATCCTCGTGTTGCCCAGA+GGG | + | chr3.2:65455808-65455827 | MS.gene08242:CDS | 55.0% | |
| TGAACAGGGCACAGAGAGAG+AGG | - | chr3.2:65454323-65454342 | None:intergenic | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr3.2:65452367-65452386 | MS.gene08242:intron | 55.0% | |
| TGTGAGGCTCCCAACCTTAG+AGG | + | chr3.2:65452412-65452431 | MS.gene08242:CDS | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+TGG | + | chr3.2:65453133-65453152 | MS.gene08242:intron | 55.0% |
| CCATTCTCTGGCGCAGTCAC+AGG | - | chr3.2:65456116-65456135 | None:intergenic | 60.0% | |
| CCTGTGACTGCGCCAGAGAA+TGG | + | chr3.2:65456113-65456132 | MS.gene08242:CDS | 60.0% | |
| CTCATCCTCGTGTTGCCCAG+AGG | + | chr3.2:65455807-65455826 | MS.gene08242:CDS | 60.0% | |
| GACACCGGTCAGACGAGTGT+CGG | - | chr3.2:65453764-65453783 | None:intergenic | 60.0% | |
| GTGTCCGACACTCGTCTGAC+CGG | + | chr3.2:65453757-65453776 | MS.gene08242:intron | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr3.2:65453407-65453426 | None:intergenic | 60.0% | |
| ! | AGGCACTGCTGGTACCCTCT+GGG | - | chr3.2:65455825-65455844 | None:intergenic | 60.0% |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr3.2:65452729-65452748 | MS.gene08242:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr3.2:65453401-65453420 | MS.gene08242:CDS | 65.0% | |
| GGTACCCTCTGGGCAACACG+AGG | - | chr3.2:65455815-65455834 | None:intergenic | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr3.2:65452730-65452749 | None:intergenic | 65.0% | |
| ! | CAGGCACTGCTGGTACCCTC+TGG | - | chr3.2:65455826-65455845 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 65450721 | 65456231 | 65450721 | ID=MS.gene08242 |
| chr3.2 | mRNA | 65450721 | 65456231 | 65450721 | ID=MS.gene08242.t1;Parent=MS.gene08242 |
| chr3.2 | exon | 65450721 | 65450833 | 65450721 | ID=MS.gene08242.t1.exon1;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65450721 | 65450833 | 65450721 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65451238 | 65451405 | 65451238 | ID=MS.gene08242.t1.exon2;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65451238 | 65451405 | 65451238 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65451968 | 65452036 | 65451968 | ID=MS.gene08242.t1.exon3;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65451968 | 65452036 | 65451968 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65452373 | 65452466 | 65452373 | ID=MS.gene08242.t1.exon4;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65452373 | 65452466 | 65452373 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65452650 | 65452750 | 65452650 | ID=MS.gene08242.t1.exon5;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65452650 | 65452750 | 65452650 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65452867 | 65452912 | 65452867 | ID=MS.gene08242.t1.exon6;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65452867 | 65452912 | 65452867 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65452996 | 65453055 | 65452996 | ID=MS.gene08242.t1.exon7;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65452996 | 65453055 | 65452996 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65453136 | 65453204 | 65453136 | ID=MS.gene08242.t1.exon8;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65453136 | 65453204 | 65453136 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65453354 | 65453437 | 65453354 | ID=MS.gene08242.t1.exon9;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65453354 | 65453437 | 65453354 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65453569 | 65453652 | 65453569 | ID=MS.gene08242.t1.exon10;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65453569 | 65453652 | 65453569 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65454905 | 65454990 | 65454905 | ID=MS.gene08242.t1.exon11;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65454905 | 65454990 | 65454905 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65455287 | 65455377 | 65455287 | ID=MS.gene08242.t1.exon12;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65455287 | 65455377 | 65455287 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65455782 | 65455862 | 65455782 | ID=MS.gene08242.t1.exon13;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65455782 | 65455862 | 65455782 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65455938 | 65456012 | 65455938 | ID=MS.gene08242.t1.exon14;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65455938 | 65456012 | 65455938 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| chr3.2 | exon | 65456097 | 65456231 | 65456097 | ID=MS.gene08242.t1.exon15;Parent=MS.gene08242.t1 |
| chr3.2 | CDS | 65456097 | 65456231 | 65456097 | ID=cds.MS.gene08242.t1;Parent=MS.gene08242.t1 |
| Gene Sequence |
| Protein sequence |
