Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08300.t1 | RHN42408.1 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.90E-271 | 944.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08300.t1 | Q9FNK4 | 71.3 | 453 | 126 | 2 | 19 | 468 | 23 | 474 | 8.4e-196 | 684.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08300.t1 | A0A396GPS7 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.3e-271 | 944.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052922 | MS.gene08300 | 0.808146 | 3.57E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052375 | MS.gene08300 | PPI |
| MS.gene87756 | MS.gene08300 | PPI |
| MS.gene87050 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene28125 | PPI |
| MS.gene030747 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene030745 | PPI |
| MS.gene08300 | MS.gene28928 | PPI |
| MS.gene26019 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene017774 | PPI |
| MS.gene08300 | MS.gene003378 | PPI |
| MS.gene014016 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene043742 | PPI |
| MS.gene010912 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene38774 | PPI |
| MS.gene031835 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene70340 | PPI |
| MS.gene08300 | MS.gene42086 | PPI |
| MS.gene08300 | MS.gene050272 | PPI |
| MS.gene059703 | MS.gene08300 | PPI |
| MS.gene08300 | MS.gene39141 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08300.t1 | MTR_7g451450 | 34.625 | 413 | 248 | 9 | 33 | 438 | 68 | 465 | 6.69e-64 | 214 |
| MS.gene08300.t1 | MTR_7g072420 | 30.864 | 405 | 243 | 13 | 44 | 424 | 75 | 466 | 1.86e-46 | 168 |
| MS.gene08300.t1 | MTR_8g091660 | 29.821 | 446 | 267 | 16 | 26 | 443 | 54 | 481 | 2.02e-46 | 167 |
| MS.gene08300.t1 | MTR_3g465800 | 28.829 | 444 | 278 | 15 | 21 | 440 | 41 | 470 | 2.25e-44 | 162 |
| MS.gene08300.t1 | MTR_3g465800 | 29.950 | 404 | 248 | 14 | 58 | 440 | 10 | 399 | 1.55e-42 | 155 |
| MS.gene08300.t1 | MTR_4g076100 | 26.714 | 423 | 249 | 13 | 52 | 427 | 81 | 489 | 3.47e-36 | 140 |
| MS.gene08300.t1 | MTR_3g118070 | 30.671 | 313 | 192 | 8 | 52 | 352 | 19 | 318 | 2.01e-33 | 130 |
| MS.gene08300.t1 | MTR_3g118070 | 30.671 | 313 | 192 | 8 | 52 | 352 | 76 | 375 | 3.41e-33 | 131 |
| MS.gene08300.t1 | MTR_4g076100 | 27.515 | 338 | 189 | 11 | 132 | 427 | 22 | 345 | 1.21e-30 | 122 |
| MS.gene08300.t1 | MTR_4g128620 | 26.383 | 235 | 156 | 7 | 218 | 437 | 587 | 819 | 6.28e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08300.t1 | AT5G46180 | 72.581 | 434 | 118 | 1 | 36 | 469 | 43 | 475 | 0.0 | 681 |
| MS.gene08300.t1 | AT1G80600 | 33.333 | 411 | 258 | 7 | 30 | 436 | 55 | 453 | 7.37e-65 | 216 |
| MS.gene08300.t1 | AT4G39660 | 29.882 | 425 | 255 | 14 | 44 | 443 | 70 | 476 | 2.27e-46 | 167 |
| MS.gene08300.t1 | AT4G39660 | 29.904 | 418 | 250 | 14 | 51 | 443 | 2 | 401 | 1.39e-45 | 164 |
| MS.gene08300.t1 | AT2G38400 | 29.873 | 395 | 243 | 10 | 52 | 424 | 80 | 462 | 3.22e-44 | 162 |
| MS.gene08300.t1 | AT2G38400 | 29.620 | 395 | 244 | 10 | 52 | 424 | 80 | 462 | 3.29e-44 | 162 |
| MS.gene08300.t1 | AT3G08860 | 28.924 | 446 | 269 | 15 | 21 | 437 | 49 | 475 | 6.82e-44 | 161 |
| MS.gene08300.t1 | AT3G08860 | 29.099 | 433 | 263 | 14 | 21 | 424 | 49 | 466 | 1.17e-43 | 160 |
| MS.gene08300.t1 | AT3G22200 | 28.947 | 418 | 247 | 14 | 52 | 427 | 70 | 479 | 4.73e-37 | 142 |
| MS.gene08300.t1 | AT3G22200 | 28.947 | 418 | 247 | 14 | 52 | 427 | 79 | 488 | 5.80e-37 | 142 |
| MS.gene08300.t1 | AT5G63570 | 29.814 | 322 | 200 | 9 | 52 | 360 | 19 | 327 | 4.13e-31 | 124 |
| MS.gene08300.t1 | AT5G63570 | 29.814 | 322 | 200 | 9 | 52 | 360 | 82 | 390 | 7.11e-31 | 124 |
| MS.gene08300.t1 | AT3G48730 | 29.193 | 322 | 202 | 9 | 52 | 360 | 80 | 388 | 2.24e-28 | 117 |
Find 118 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCATAGCTGCATTTATTT+TGG | 0.157532 | 4.3:-17050686 | MS.gene08300:CDS |
| GGCCATCTTAAAGTTGATTT+TGG | 0.199551 | 4.3:-17050859 | MS.gene08300:CDS |
| TTAAGATGGCCTGGCATTAA+AGG | 0.213274 | 4.3:+17050871 | None:intergenic |
| GCTGGAGGAGCAGCATCTTT+TGG | 0.213355 | 4.3:+17046992 | None:intergenic |
| AATCATCAACACGTTATATT+TGG | 0.227981 | 4.3:+17049438 | None:intergenic |
| GAAAGTTTGTCCCCTGTATC+AGG | 0.309360 | 4.3:-17047624 | MS.gene08300:CDS |
| AATGAAGCTACCCGTGGTTT+TGG | 0.314723 | 4.3:-17050895 | MS.gene08300:CDS |
| ATTCTTTGTCAATGATTGTT+TGG | 0.317700 | 4.3:+17052232 | None:intergenic |
| CGCACCTCCTTCACATGGTC+CGG | 0.342009 | 4.3:+17047684 | None:intergenic |
| CGAGAAGCTCACCTCCCATT+TGG | 0.348974 | 4.3:+17047736 | None:intergenic |
| CTTAATTCAAAGCCTGATAC+AGG | 0.361779 | 4.3:+17047612 | None:intergenic |
| TCTGCAAGAACTGCGCTAAC+TGG | 0.362917 | 4.3:+17048592 | None:intergenic |
| TACAGAGGAACCAGAACTTT+TGG | 0.363782 | 4.3:-17052288 | MS.gene08300:CDS |
| TCATGTTGTGGCTGCTTCAA+TGG | 0.367473 | 4.3:-17050952 | MS.gene08300:CDS |
| CATAGTTATACCTCATTGTT+GGG | 0.368104 | 4.3:+17051202 | None:intergenic |
| TTCTTTGTCAATGATTGTTT+GGG | 0.376263 | 4.3:+17052233 | None:intergenic |
| AGCCTTGTTTGGTTATGATA+TGG | 0.380865 | 4.3:-17051308 | MS.gene08300:CDS |
| TGGCTACTCTGCAGTTAATC+AGG | 0.391203 | 4.3:-17051794 | MS.gene08300:intron |
| TGTGGCAACACCAAAAGTTC+TGG | 0.395603 | 4.3:+17052278 | None:intergenic |
| GAACCTATCCAAGGGGAAGC+TGG | 0.400196 | 4.3:-17050664 | MS.gene08300:CDS |
| TCATAGTTATACCTCATTGT+TGG | 0.402470 | 4.3:+17051201 | None:intergenic |
| TCAATATATTTGTTTCCCTC+TGG | 0.406966 | 4.3:+17051826 | None:intergenic |
| CGAGGGCCTTAGAACCTTGT+TGG | 0.409141 | 4.3:+17047059 | None:intergenic |
| TGAGATCCAACAAGGTTCTA+AGG | 0.410990 | 4.3:-17047065 | MS.gene08300:CDS |
| ACAGCTTTCAAATAACCATC+TGG | 0.413613 | 4.3:+17049475 | None:intergenic |
| GAGAAGCTCACCTCCCATTT+GGG | 0.418819 | 4.3:+17047737 | None:intergenic |
| TGCTTCAATGGTCGTACATT+GGG | 0.424592 | 4.3:-17050940 | MS.gene08300:CDS |
| AAAGATGCTGCTCCTCCAGC+TGG | 0.425140 | 4.3:-17046989 | MS.gene08300:CDS |
| TCAGATACTAGGGAAAGCTT+TGG | 0.426949 | 4.3:-17048629 | MS.gene08300:intron |
| GAGTATTTGACAGCCTTGTT+TGG | 0.427807 | 4.3:-17051319 | MS.gene08300:CDS |
| TCTTAAAGCTTTAAAAGATC+AGG | 0.428054 | 4.3:-17051401 | MS.gene08300:CDS |
| TTTGCATGAGCAAATACAAT+AGG | 0.428807 | 4.3:+17051868 | None:intergenic |
| CAGATACTAGGGAAAGCTTT+GGG | 0.440625 | 4.3:-17048628 | MS.gene08300:CDS |
| TGAACACCAACCACTACATC+TGG | 0.440669 | 4.3:+17049346 | None:intergenic |
| CCTTCAGCACCAGTATTCAT+AGG | 0.441808 | 4.3:+17051280 | None:intergenic |
| GTGAAGGAGGTGCGGGGAAG+AGG | 0.443048 | 4.3:-17047675 | MS.gene08300:CDS |
| TAAGGCCCTCGCTGATGTGC+TGG | 0.445290 | 4.3:-17047047 | MS.gene08300:CDS |
| CGTTGTGGTCGAGTCGTGTA+TGG | 0.450567 | 4.3:-17046950 | MS.gene08300:CDS |
| ATTGCTGATGAAATACAAAC+TGG | 0.456192 | 4.3:-17049418 | MS.gene08300:CDS |
| CGGGGAAGAGGACTGTTCAT+TGG | 0.461273 | 4.3:-17047663 | MS.gene08300:CDS |
| AACCTATCCAAGGGGAAGCT+GGG | 0.467176 | 4.3:-17050663 | MS.gene08300:CDS |
| ATTGTATTTGCTCATGCAAA+GGG | 0.473811 | 4.3:-17051865 | MS.gene08300:CDS |
| GGACCATGTGAAGGAGGTGC+GGG | 0.476342 | 4.3:-17047682 | MS.gene08300:CDS |
| CAAACTGGATTAGCAAGAAC+AGG | 0.479961 | 4.3:-17049403 | MS.gene08300:CDS |
| ATTGGACAGATCTACCCAAA+TGG | 0.483780 | 4.3:-17047751 | MS.gene08300:intron |
| CTAGGGAAAGCTTTGGGTGG+AGG | 0.491794 | 4.3:-17048622 | MS.gene08300:CDS |
| TTAAACCTTCCATGCTGTCC+AGG | 0.491922 | 4.3:+17048544 | None:intergenic |
| CTTTAAAAGATCAGGCAGAC+AGG | 0.501503 | 4.3:-17051393 | MS.gene08300:CDS |
| CAAATGGGAGGTGAGCTTCT+CGG | 0.504493 | 4.3:-17047735 | MS.gene08300:CDS |
| AACATACCCCAGCTTCCCCT+TGG | 0.504988 | 4.3:+17050656 | None:intergenic |
| CGTTGAAGTTAGCAAGAAAG+TGG | 0.505236 | 4.3:-17051246 | MS.gene08300:CDS |
| CCACAACGATCACATGCACT+AGG | 0.505325 | 4.3:+17046965 | None:intergenic |
| CTGCTTCAATGGTCGTACAT+TGG | 0.506187 | 4.3:-17050941 | MS.gene08300:CDS |
| TTGGGAAGATGAAGAAGCGT+TGG | 0.508848 | 4.3:+17052251 | None:intergenic |
| TTTCTTACCTTATGCACAGT+GGG | 0.509433 | 4.3:+17047523 | None:intergenic |
| ATGGCAACTGCACTGGCCAA+TGG | 0.511220 | 4.3:+17048025 | None:intergenic |
| TGAGGCAATGGCAACTGCAC+TGG | 0.516585 | 4.3:+17048018 | None:intergenic |
| CACCAAAATCAACTTTAAGA+TGG | 0.516646 | 4.3:+17050857 | None:intergenic |
| TATTGTATTTGCTCATGCAA+AGG | 0.517613 | 4.3:-17051866 | MS.gene08300:CDS |
| GCTCTTATTGTCTCATGTTG+TGG | 0.519417 | 4.3:-17050964 | MS.gene08300:CDS |
| AAATCAACTTTAAGATGGCC+TGG | 0.519591 | 4.3:+17050862 | None:intergenic |
| TCACATGCACTAGGGCCAGC+TGG | 0.522239 | 4.3:+17046974 | None:intergenic |
| CAGCTTTCAAATAACCATCT+GGG | 0.525779 | 4.3:+17049476 | None:intergenic |
| TTGGACAGATCTACCCAAAT+GGG | 0.526655 | 4.3:-17047750 | MS.gene08300:intron |
| TGAGCAAATACAATAGGAAG+TGG | 0.526855 | 4.3:+17051874 | None:intergenic |
| ATGGTACTTCCTATGAATAC+TGG | 0.531481 | 4.3:-17051289 | MS.gene08300:CDS |
| GCACCTCCTTCACATGGTCC+GGG | 0.537138 | 4.3:+17047685 | None:intergenic |
| TGCAAAGGGATCAGCTGTGT+GGG | 0.540779 | 4.3:-17051851 | MS.gene08300:CDS |
| TTCTTTGATCACTTCAAGTG+AGG | 0.543995 | 4.3:+17048000 | None:intergenic |
| TGGGAAGATGAAGAAGCGTT+GGG | 0.548907 | 4.3:+17052252 | None:intergenic |
| GATCACTTCAAGTGAGGCAA+TGG | 0.551674 | 4.3:+17048006 | None:intergenic |
| AATTGTGTCATGTGTTGACT+TGG | 0.561328 | 4.3:+17047560 | None:intergenic |
| TTCCCCGCACCTCCTTCACA+TGG | 0.564937 | 4.3:+17047679 | None:intergenic |
| ATCAGCTGTGTGGGATCCAG+AGG | 0.565766 | 4.3:-17051842 | MS.gene08300:CDS |
| TGTATAAAACCTGGACAGCA+TGG | 0.573539 | 4.3:-17048553 | MS.gene08300:CDS |
| CAAATACAATAGGAAGTGGA+TGG | 0.580722 | 4.3:+17051878 | None:intergenic |
| GTCAAATACTCAGCAAACAC+CGG | 0.582762 | 4.3:+17051331 | None:intergenic |
| GAATACTGGTGCTGAAGGTG+TGG | 0.583184 | 4.3:-17051275 | MS.gene08300:CDS |
| TAAAACCTGGACAGCATGGA+AGG | 0.583742 | 4.3:-17048549 | MS.gene08300:intron |
| ACCCCAGCTTCCCCTTGGAT+AGG | 0.586113 | 4.3:+17050661 | None:intergenic |
| ACCTATCCAAGGGGAAGCTG+GGG | 0.586910 | 4.3:-17050662 | MS.gene08300:intron |
| AGCTTTCAAATAACCATCTG+GGG | 0.599511 | 4.3:+17049477 | None:intergenic |
| GTGATGCTTTGTATAAAACC+TGG | 0.600068 | 4.3:-17048562 | MS.gene08300:CDS |
| CGGACCATGTGAAGGAGGTG+CGG | 0.603381 | 4.3:-17047683 | MS.gene08300:CDS |
| TAATTCAAAGCCTGATACAG+GGG | 0.605478 | 4.3:+17047614 | None:intergenic |
| GTTGAAGTTAGCAAGAAAGT+GGG | 0.607885 | 4.3:-17051245 | MS.gene08300:CDS |
| TTAATTCAAAGCCTGATACA+GGG | 0.608427 | 4.3:+17047613 | None:intergenic |
| AGAAGTTCGTCCAGATGTAG+TGG | 0.615199 | 4.3:-17049356 | MS.gene08300:intron |
| TGAAGAAGCGTTGGGTTGTG+TGG | 0.618995 | 4.3:+17052260 | None:intergenic |
| CACAACGATCACATGCACTA+GGG | 0.624398 | 4.3:+17046966 | None:intergenic |
| AATTTCCAGCACATCAGCGA+GGG | 0.626318 | 4.3:+17047042 | None:intergenic |
| GACCATGTGAAGGAGGTGCG+GGG | 0.627725 | 4.3:-17047681 | MS.gene08300:CDS |
| GCATTAAAGGACCAAAACCA+CGG | 0.628989 | 4.3:+17050884 | None:intergenic |
| TACCATATCATAACCAAACA+AGG | 0.631313 | 4.3:+17051306 | None:intergenic |
| ATGCAAAGGGATCAGCTGTG+TGG | 0.641631 | 4.3:-17051852 | MS.gene08300:CDS |
| ACAATACCCGGACCATGTGA+AGG | 0.644513 | 4.3:-17047691 | MS.gene08300:CDS |
| GCTTTCAAATAACCATCTGG+GGG | 0.649011 | 4.3:+17049478 | None:intergenic |
| TCTTACCTTATGCACAGTGG+GGG | 0.652538 | 4.3:+17047525 | None:intergenic |
| CTTTCTTACCTTATGCACAG+TGG | 0.652810 | 4.3:+17047522 | None:intergenic |
| CATTAAAGGACCAAAACCAC+GGG | 0.654497 | 4.3:+17050885 | None:intergenic |
| CCTATGAATACTGGTGCTGA+AGG | 0.655355 | 4.3:-17051280 | MS.gene08300:CDS |
| TTCTTACCTTATGCACAGTG+GGG | 0.660148 | 4.3:+17047524 | None:intergenic |
| GAAGATTCAGAAACAATACC+CGG | 0.661569 | 4.3:-17047703 | MS.gene08300:CDS |
| GACAGATCTACCCAAATGGG+AGG | 0.666226 | 4.3:-17047747 | MS.gene08300:intron |
| ATACTAGGGAAAGCTTTGGG+TGG | 0.669588 | 4.3:-17048625 | MS.gene08300:CDS |
| CCAAAATAAATGCAGCTATG+CGG | 0.671952 | 4.3:+17050686 | None:intergenic |
| AGATCAGGCAGACAGGCTGA+CGG | 0.672284 | 4.3:-17051386 | MS.gene08300:CDS |
| CATGCACTAGGGCCAGCTGG+AGG | 0.674851 | 4.3:+17046977 | None:intergenic |
| ATACCCGGACCATGTGAAGG+AGG | 0.676758 | 4.3:-17047688 | MS.gene08300:CDS |
| TCAGCTGTGTGGGATCCAGA+GGG | 0.679081 | 4.3:-17051841 | MS.gene08300:CDS |
| AAGAAGAGAGACTTGCTGAG+AGG | 0.679464 | 4.3:-17047982 | MS.gene08300:intron |
| TGTGACAATGAAGCTACCCG+TGG | 0.679963 | 4.3:-17050901 | MS.gene08300:CDS |
| CCTAGTGCATGTGATCGTTG+TGG | 0.687700 | 4.3:-17046965 | MS.gene08300:CDS |
| TTGAAGTTAGCAAGAAAGTG+GGG | 0.692526 | 4.3:-17051244 | MS.gene08300:CDS |
| AGTGCGGATGAGATCCAACA+AGG | 0.696962 | 4.3:-17047073 | MS.gene08300:CDS |
| CTTTCAAATAACCATCTGGG+GGG | 0.711042 | 4.3:+17049479 | None:intergenic |
| CAATTTCCAGCACATCAGCG+AGG | 0.712817 | 4.3:+17047041 | None:intergenic |
| CTTTCTTGCTAACTTCAACG+CGG | 0.721978 | 4.3:+17051249 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATGTTATGAAAAA+TGG | - | chr4.3:17049628-17049647 | MS.gene08300:intron | 10.0% |
| !! | AATTAATTGTTTATTAAAGA+AGG | - | chr4.3:17051162-17051181 | MS.gene08300:intron | 10.0% |
| !! | ATATTAATGTTATGAAAAAT+GGG | - | chr4.3:17049629-17049648 | MS.gene08300:intron | 10.0% |
| !! | TTGAATAAATTTATTTCATT+AGG | - | chr4.3:17051360-17051379 | MS.gene08300:CDS | 10.0% |
| !!! | AAAAGTATTCTTTTTTTTTT+TGG | + | chr4.3:17048674-17048693 | None:intergenic | 10.0% |
| !!! | AAATATATTGATTTTTTATC+TGG | - | chr4.3:17047462-17047481 | MS.gene08300:intron | 10.0% |
| !!! | ATTTTAATGAATGAAATTAT+CGG | + | chr4.3:17051140-17051159 | None:intergenic | 10.0% |
| !!! | TTTATTAGTTTAATATATGA+AGG | + | chr4.3:17047188-17047207 | None:intergenic | 10.0% |
| !!! | TTTTTTATTCCTTAATTTTT+GGG | - | chr4.3:17047777-17047796 | MS.gene08300:intron | 10.0% |
| !! | AAAAATAAATAACCATTACA+AGG | + | chr4.3:17051041-17051060 | None:intergenic | 15.0% |
| !! | AAACTATTATACTTCATAAA+TGG | + | chr4.3:17049464-17049483 | None:intergenic | 15.0% |
| !! | AATAAAAAAAATCAGTTTGA+CGG | + | chr4.3:17049600-17049619 | None:intergenic | 15.0% |
| !! | ATAAGAATAGAAAATAGAAT+CGG | + | chr4.3:17048970-17048989 | None:intergenic | 15.0% |
| !! | ATGATGAATAAATATAAATG+AGG | + | chr4.3:17051862-17051881 | None:intergenic | 15.0% |
| !! | CAAAAATTAAGGAATAAAAA+AGG | + | chr4.3:17047778-17047797 | None:intergenic | 15.0% |
| !! | TACAGAATAAAAAAGAAAAA+GGG | + | chr4.3:17050567-17050586 | None:intergenic | 15.0% |
| !! | TCTGAACTTAAATTATTAAA+AGG | + | chr4.3:17050075-17050094 | None:intergenic | 15.0% |
| !! | TTACAGAATAAAAAAGAAAA+AGG | + | chr4.3:17050568-17050587 | None:intergenic | 15.0% |
| !!! | CTTTTTTATTCCTTAATTTT+TGG | - | chr4.3:17047776-17047795 | MS.gene08300:intron | 15.0% |
| !!! | TTTAAAGCTTTAAGAATTTT+AGG | + | chr4.3:17047870-17047889 | None:intergenic | 15.0% |
| !!! | TTTTAATAATTTAAGTTCAG+AGG | - | chr4.3:17050074-17050093 | MS.gene08300:intron | 15.0% |
| !!! | TTTTCTTATATTATTATCAC+CGG | - | chr4.3:17047597-17047616 | MS.gene08300:CDS | 15.0% |
| !! | AAGAAAGTTAAAGAAATTAG+TGG | + | chr4.3:17050622-17050641 | None:intergenic | 20.0% |
| !! | AAGAAATTAGTGGTATAAAA+AGG | + | chr4.3:17050612-17050631 | None:intergenic | 20.0% |
| !! | AATAAATATAAATGAGGCAA+TGG | + | chr4.3:17051856-17051875 | None:intergenic | 20.0% |
| !! | AATAGAAAATAGAATCAGTT+AGG | + | chr4.3:17048965-17048984 | None:intergenic | 20.0% |
| !! | AATTATTGAAATTGAAAGCT+AGG | - | chr4.3:17051950-17051969 | MS.gene08300:intron | 20.0% |
| !! | AGGAAAAACTAGATATAATA+TGG | + | chr4.3:17050358-17050377 | None:intergenic | 20.0% |
| !! | ATAGAAAATAGAATCAGTTA+GGG | + | chr4.3:17048964-17048983 | None:intergenic | 20.0% |
| !! | ATCAAGATATTACAACTATT+AGG | + | chr4.3:17048112-17048131 | None:intergenic | 20.0% |
| !! | ATTCTGTTATTATGAAATGT+TGG | - | chr4.3:17049225-17049244 | MS.gene08300:intron | 20.0% |
| !! | CATACATAATATTACATTCT+CGG | + | chr4.3:17049491-17049510 | None:intergenic | 20.0% |
| !! | GAAAAGTAACAGAAAAAAAA+AGG | + | chr4.3:17051211-17051230 | None:intergenic | 20.0% |
| !! | TAAAAAAAAATCCATCCTAT+GGG | - | chr4.3:17051060-17051079 | MS.gene08300:intron | 20.0% |
| !! | TAACGTCATATAAAAAAATG+TGG | + | chr4.3:17049756-17049775 | None:intergenic | 20.0% |
| !! | TATAGTGAAAAATGAAAACA+AGG | + | chr4.3:17051925-17051944 | None:intergenic | 20.0% |
| !! | TCTCATTTAAAAAATCCAAA+TGG | + | chr4.3:17048236-17048255 | None:intergenic | 20.0% |
| !! | TGAATTAAGTGAAAAATTGA+AGG | - | chr4.3:17051678-17051697 | MS.gene08300:intron | 20.0% |
| !! | TTAAAAAAAAATCCATCCTA+TGG | - | chr4.3:17051059-17051078 | MS.gene08300:intron | 20.0% |
| !! | TTAATCAGGTATAAATTGAA+CGG | - | chr4.3:17047496-17047515 | MS.gene08300:intron | 20.0% |
| !!! | AAGCATTATTTCTTTTATCT+AGG | + | chr4.3:17052074-17052093 | None:intergenic | 20.0% |
| !!! | ATGACGTTATATTTTTTTAC+AGG | - | chr4.3:17049767-17049786 | MS.gene08300:intron | 20.0% |
| !!! | TGGATTTTTTAAATGAGATT+CGG | - | chr4.3:17048238-17048257 | MS.gene08300:intron | 20.0% |
| !!! | TTTGATTTGATTAAGTTGAA+AGG | - | chr4.3:17050939-17050958 | MS.gene08300:CDS | 20.0% |
| ! | AAAACAGAGAATATTATGGT+TGG | - | chr4.3:17050260-17050279 | MS.gene08300:intron | 25.0% |
| ! | AAAGATTTGATTACTGTGAA+TGG | - | chr4.3:17052038-17052057 | MS.gene08300:intron | 25.0% |
| ! | AAATCCTAGACCAAAATATT+AGG | + | chr4.3:17052163-17052182 | None:intergenic | 25.0% |
| ! | AACTTAAGACATTGCTTAAA+TGG | + | chr4.3:17051789-17051808 | None:intergenic | 25.0% |
| ! | AATCATCAACACGTTATATT+TGG | + | chr4.3:17049841-17049860 | None:intergenic | 25.0% |
| ! | AATCCTAGACCAAAATATTA+GGG | + | chr4.3:17052162-17052181 | None:intergenic | 25.0% |
| ! | ACAAGAAAACAATAAACGAA+TGG | + | chr4.3:17050782-17050801 | None:intergenic | 25.0% |
| ! | ACAGAATATATAAGAGGTAA+AGG | + | chr4.3:17049956-17049975 | None:intergenic | 25.0% |
| ! | AGAGATACAGAATATATAAG+AGG | + | chr4.3:17049962-17049981 | None:intergenic | 25.0% |
| ! | ATAGAAAATAGAATCGGTAA+AGG | + | chr4.3:17049337-17049356 | None:intergenic | 25.0% |
| ! | ATCTCAGAAATTGCTTATAT+AGG | - | chr4.3:17049260-17049279 | MS.gene08300:intron | 25.0% |
| ! | ATTCTGTTATTGTGAAATGA+TGG | - | chr4.3:17048852-17048871 | MS.gene08300:intron | 25.0% |
| ! | ATTCTTTGTCAATGATTGTT+TGG | + | chr4.3:17047047-17047066 | None:intergenic | 25.0% |
| ! | GATAAAAGAAATAATGCTTC+TGG | - | chr4.3:17052075-17052094 | MS.gene08300:intron | 25.0% |
| ! | GTGAAAAAACAAACATAAGT+TGG | + | chr4.3:17050510-17050529 | None:intergenic | 25.0% |
| ! | TCACAAAAAAGAGAAACTTA+TGG | - | chr4.3:17050526-17050545 | MS.gene08300:intron | 25.0% |
| ! | TCTCAGAAATTGCTTATATA+GGG | - | chr4.3:17049261-17049280 | MS.gene08300:intron | 25.0% |
| ! | TGGTAAAACAGAGAATATTA+TGG | - | chr4.3:17050256-17050275 | MS.gene08300:intron | 25.0% |
| ! | TTCATAAGCATAACTAGATT+AGG | + | chr4.3:17051988-17052007 | None:intergenic | 25.0% |
| ! | TTCTTTGTCAATGATTGTTT+GGG | + | chr4.3:17047046-17047065 | None:intergenic | 25.0% |
| !! | AAAAACAAACATAAGTTGGA+TGG | + | chr4.3:17050506-17050525 | None:intergenic | 25.0% |
| !! | ATCTAAGATATTGCTTATAG+AGG | - | chr4.3:17048887-17048906 | MS.gene08300:intron | 25.0% |
| !! | TAAGTTGAAAGGTTTCAAAA+AGG | - | chr4.3:17050950-17050969 | MS.gene08300:CDS | 25.0% |
| !! | TCTAAGATATTGCTTATAGA+GGG | - | chr4.3:17048888-17048907 | MS.gene08300:intron | 25.0% |
| !! | TGTAAATGTCCCTAATATTT+TGG | - | chr4.3:17052150-17052169 | MS.gene08300:intron | 25.0% |
| !!! | AAAGACACCATTTTTATTTC+TGG | - | chr4.3:17047125-17047144 | MS.gene08300:intron | 25.0% |
| !!! | AAGACACCATTTTTATTTCT+GGG | - | chr4.3:17047126-17047145 | MS.gene08300:intron | 25.0% |
| !!! | AATGTACCGTTTTTGAATTT+CGG | - | chr4.3:17049413-17049432 | MS.gene08300:CDS | 25.0% |
| !!! | CTTTTTTTAATCACTCCATT+GGG | - | chr4.3:17047215-17047234 | MS.gene08300:intron | 25.0% |
| !!! | GTCACTTGTTTTATCTTAAA+TGG | - | chr4.3:17048763-17048782 | MS.gene08300:intron | 25.0% |
| !!! | GTTAGTCTTATATATTGATC+TGG | - | chr4.3:17051428-17051447 | MS.gene08300:intron | 25.0% |
| !!! | TCTTAAAGCTTTAAAAGATC+AGG | - | chr4.3:17047875-17047894 | MS.gene08300:intron | 25.0% |
| !!! | TCTTTTTTTAATCACTCCAT+TGG | - | chr4.3:17047214-17047233 | MS.gene08300:intron | 25.0% |
| !!! | TTCTTTTGATTCAGATACTA+GGG | - | chr4.3:17050637-17050656 | MS.gene08300:intron | 25.0% |
| !!! | TTGCATTTTTCAAAATTGTC+CGG | - | chr4.3:17048135-17048154 | MS.gene08300:intron | 25.0% |
| !!! | TTTCTTTTGATTCAGATACT+AGG | - | chr4.3:17050636-17050655 | MS.gene08300:intron | 25.0% |
| !!! | TTTTTTGTAGCTATACCATT+TGG | - | chr4.3:17048218-17048237 | MS.gene08300:intron | 25.0% |
| AACAGAACAGAAGAAAACAA+GGG | + | chr4.3:17047101-17047120 | None:intergenic | 30.0% | |
| AAGAAATCAATGCAAAAGTG+AGG | + | chr4.3:17051104-17051123 | None:intergenic | 30.0% | |
| AAGCAAATATTTAGCATCAC+CGG | + | chr4.3:17048157-17048176 | None:intergenic | 30.0% | |
| AAGGGAAAGATATATACTTG+TGG | + | chr4.3:17047083-17047102 | None:intergenic | 30.0% | |
| AGGGAAAGATATATACTTGT+GGG | + | chr4.3:17047082-17047101 | None:intergenic | 30.0% | |
| AGTGAAAAATTGAAGGATAG+AGG | - | chr4.3:17051685-17051704 | MS.gene08300:intron | 30.0% | |
| ATGTTTATAGCGAAGTACAA+GGG | + | chr4.3:17049993-17050012 | None:intergenic | 30.0% | |
| ATTGCTGATGAAATACAAAC+TGG | - | chr4.3:17049858-17049877 | MS.gene08300:intron | 30.0% | |
| ATTGTATTTGCTCATGCAAA+GGG | - | chr4.3:17047411-17047430 | MS.gene08300:intron | 30.0% | |
| ATTTGATTACTGTGAATGGT+AGG | - | chr4.3:17052042-17052061 | MS.gene08300:intron | 30.0% | |
| CAATAGTTGTCAAACATAGA+AGG | - | chr4.3:17050802-17050821 | MS.gene08300:intron | 30.0% | |
| CAATGGTGAAAGTTACAAAT+AGG | + | chr4.3:17051839-17051858 | None:intergenic | 30.0% | |
| CAGATATATAAGAGATATGC+TGG | + | chr4.3:17049375-17049394 | None:intergenic | 30.0% | |
| CATAGTTATACCTCATTGTT+GGG | + | chr4.3:17048077-17048096 | None:intergenic | 30.0% | |
| CATCATACAAAGGAACATAT+TGG | + | chr4.3:17048705-17048724 | None:intergenic | 30.0% | |
| CTTGCAAAGACTAAATCATA+TGG | + | chr4.3:17049109-17049128 | None:intergenic | 30.0% | |
| GAAAAAAATTCCCAACAATG+AGG | - | chr4.3:17048064-17048083 | MS.gene08300:intron | 30.0% | |
| GAATCGTATGATATGGTTAA+AGG | + | chr4.3:17050207-17050226 | None:intergenic | 30.0% | |
| GTAACACCGAAATTCAAAAA+CGG | + | chr4.3:17049422-17049441 | None:intergenic | 30.0% | |
| GTCTTGATTTAACCTTGTAA+TGG | - | chr4.3:17051026-17051045 | MS.gene08300:intron | 30.0% | |
| GTTAAATCAAGACATGCAAA+CGG | + | chr4.3:17051019-17051038 | None:intergenic | 30.0% | |
| TACCATATCATAACCAAACA+AGG | + | chr4.3:17047973-17047992 | None:intergenic | 30.0% | |
| TAGCATTAGTAAACAGGATT+TGG | + | chr4.3:17047747-17047766 | None:intergenic | 30.0% | |
| TATTGTATTTGCTCATGCAA+AGG | - | chr4.3:17047410-17047429 | MS.gene08300:intron | 30.0% | |
| TCAATATATTTGTTTCCCTC+TGG | + | chr4.3:17047453-17047472 | None:intergenic | 30.0% | |
| TCAGCAAAAGTAAATTGACA+CGG | + | chr4.3:17048276-17048295 | None:intergenic | 30.0% | |
| TCATAGTTATACCTCATTGT+TGG | + | chr4.3:17048078-17048097 | None:intergenic | 30.0% | |
| TGATATGGTTAAAGGAAGTA+AGG | + | chr4.3:17050199-17050218 | None:intergenic | 30.0% | |
| TGTGGAAAAGATGATATGTT+TGG | + | chr4.3:17049738-17049757 | None:intergenic | 30.0% | |
| TTAATTCAAAGCCTGATACA+GGG | + | chr4.3:17051666-17051685 | None:intergenic | 30.0% | |
| TTTCTATTTCCTTTGTGAAC+TGG | - | chr4.3:17047706-17047725 | MS.gene08300:CDS | 30.0% | |
| TTTGCATGAGCAAATACAAT+AGG | + | chr4.3:17047411-17047430 | None:intergenic | 30.0% | |
| ! | ATGATTTAGTCTTTGCAAGA+AGG | - | chr4.3:17049110-17049129 | MS.gene08300:intron | 30.0% |
| ! | CACCAAAATCAACTTTAAGA+TGG | + | chr4.3:17048422-17048441 | None:intergenic | 30.0% |
| ! | CTTGTACTTTTGTGTTTTAC+TGG | - | chr4.3:17050236-17050255 | MS.gene08300:intron | 30.0% |
| ! | TATTCTGTAACCTTTTTCTG+AGG | - | chr4.3:17050578-17050597 | MS.gene08300:intron | 30.0% |
| ! | TCGTCTTTTCCCAAAAATTA+AGG | + | chr4.3:17047789-17047808 | None:intergenic | 30.0% |
| ! | TTTCTACAATGATCGTTTTC+CGG | - | chr4.3:17047926-17047945 | MS.gene08300:intron | 30.0% |
| !! | AAAGGAAGTAAGGTATCTTT+TGG | + | chr4.3:17050189-17050208 | None:intergenic | 30.0% |
| !! | TATGAAGGTTGATTAGCTTA+AGG | + | chr4.3:17047173-17047192 | None:intergenic | 30.0% |
| !! | TGTCAATTTACTTTTGCTGA+TGG | - | chr4.3:17048276-17048295 | MS.gene08300:intron | 30.0% |
| !!! | AGTGTATGTCATTTTTCTTC+AGG | - | chr4.3:17047833-17047852 | MS.gene08300:intron | 30.0% |
| !!! | ATAGAGTTACTTTTTTCCTG+AGG | - | chr4.3:17049067-17049086 | MS.gene08300:intron | 30.0% |
| !!! | GTGTATGTCATTTTTCTTCA+GGG | - | chr4.3:17047834-17047853 | MS.gene08300:intron | 30.0% |
| !!! | GTTACTTTTCACAGTACTTT+TGG | - | chr4.3:17051221-17051240 | MS.gene08300:CDS | 30.0% |
| !!! | TTATTTTGGAACCTATCCAA+GGG | - | chr4.3:17048604-17048623 | MS.gene08300:CDS | 30.0% |
| !!! | TTTATTTTGGAACCTATCCA+AGG | - | chr4.3:17048603-17048622 | MS.gene08300:CDS | 30.0% |
| AAACCATCTTCATTCATCTG+AGG | + | chr4.3:17047677-17047696 | None:intergenic | 35.0% | |
| AACCATCTTCATTCATCTGA+GGG | + | chr4.3:17047676-17047695 | None:intergenic | 35.0% | |
| AAGCAGTAGCATTAGTAAAC+AGG | + | chr4.3:17047753-17047772 | None:intergenic | 35.0% | |
| AAGTAACCTAATCCTTTGAG+AGG | + | chr4.3:17052124-17052143 | None:intergenic | 35.0% | |
| ACAGCTTTCAAATAACCATC+TGG | + | chr4.3:17049804-17049823 | None:intergenic | 35.0% | |
| AGCTTTCAAATAACCATCTG+GGG | + | chr4.3:17049802-17049821 | None:intergenic | 35.0% | |
| AGTTTCTGATGCATATTCAC+AGG | + | chr4.3:17050387-17050406 | None:intergenic | 35.0% | |
| ATGGTACTTCCTATGAATAC+TGG | - | chr4.3:17047987-17048006 | MS.gene08300:CDS | 35.0% | |
| ATTAGATCATGAACGAAAGC+CGG | + | chr4.3:17049554-17049573 | None:intergenic | 35.0% | |
| CAAAAACGGTACATTTCACA+TGG | + | chr4.3:17049408-17049427 | None:intergenic | 35.0% | |
| CAAATACAATAGGAAGTGGA+TGG | + | chr4.3:17047401-17047420 | None:intergenic | 35.0% | |
| CAATAAACTCCAGTTCACAA+AGG | + | chr4.3:17047718-17047737 | None:intergenic | 35.0% | |
| CAGCTTTCAAATAACCATCT+GGG | + | chr4.3:17049803-17049822 | None:intergenic | 35.0% | |
| CCAAAATAAATGCAGCTATG+CGG | + | chr4.3:17048593-17048612 | None:intergenic | 35.0% | |
| CTAGGTAGATGCATTTAACT+AGG | - | chr4.3:17050461-17050480 | MS.gene08300:intron | 35.0% | |
| CTTAATTCAAAGCCTGATAC+AGG | + | chr4.3:17051667-17051686 | None:intergenic | 35.0% | |
| GAACAGAACAGAAGAAAACA+AGG | + | chr4.3:17047102-17047121 | None:intergenic | 35.0% | |
| GAAGATTCAGAAACAATACC+CGG | - | chr4.3:17051573-17051592 | MS.gene08300:intron | 35.0% | |
| GAGAGACCCAGAAATAAAAA+TGG | + | chr4.3:17047135-17047154 | None:intergenic | 35.0% | |
| GATGTTTATAGCGAAGTACA+AGG | + | chr4.3:17049994-17050013 | None:intergenic | 35.0% | |
| GGAAACTAAACCTCAGAAAA+AGG | + | chr4.3:17050591-17050610 | None:intergenic | 35.0% | |
| GTGATGCTTTGTATAAAACC+TGG | - | chr4.3:17050714-17050733 | MS.gene08300:intron | 35.0% | |
| GTTGAAGTTAGCAAGAAAGT+GGG | - | chr4.3:17048031-17048050 | MS.gene08300:CDS | 35.0% | |
| TAAAAGTAATCCTTGCAGTG+CGG | - | chr4.3:17052187-17052206 | MS.gene08300:intron | 35.0% | |
| TAATGTGAGAGCTATTCTAC+AGG | + | chr4.3:17049685-17049704 | None:intergenic | 35.0% | |
| TAATTCAAAGCCTGATACAG+GGG | + | chr4.3:17051665-17051684 | None:intergenic | 35.0% | |
| TATAGCTAGTTGAGTACTTC+AGG | - | chr4.3:17051882-17051901 | MS.gene08300:CDS | 35.0% | |
| TCTATTGTGATACATGAGCA+CGG | + | chr4.3:17049158-17049177 | None:intergenic | 35.0% | |
| TGAACTGGAGTTTATTGTTG+TGG | - | chr4.3:17047721-17047740 | MS.gene08300:CDS | 35.0% | |
| TGAGCAAATACAATAGGAAG+TGG | + | chr4.3:17047405-17047424 | None:intergenic | 35.0% | |
| TGCAACTGATGTCTTAGTAT+TGG | - | chr4.3:17051507-17051526 | MS.gene08300:intron | 35.0% | |
| TGCATATTCACAGGAATAGA+AGG | + | chr4.3:17050378-17050397 | None:intergenic | 35.0% | |
| TTACAATCCAAACAACCCAA+TGG | + | chr4.3:17047233-17047252 | None:intergenic | 35.0% | |
| TTCTTTGATCACTTCAAGTG+AGG | + | chr4.3:17051279-17051298 | None:intergenic | 35.0% | |
| TTGAAGTTAGCAAGAAAGTG+GGG | - | chr4.3:17048032-17048051 | MS.gene08300:CDS | 35.0% | |
| TTGAGTTCACATGCACATTA+AGG | - | chr4.3:17051807-17051826 | MS.gene08300:CDS | 35.0% | |
| TTGCGAAGAATCGTATGATA+TGG | + | chr4.3:17050214-17050233 | None:intergenic | 35.0% | |
| TTTCTTACCTTATGCACAGT+GGG | + | chr4.3:17051756-17051775 | None:intergenic | 35.0% | |
| ! | AACTAGACATCTTTTTCCTC+AGG | + | chr4.3:17049086-17049105 | None:intergenic | 35.0% |
| ! | AATCCTTTGAGAGGACAAAA+AGG | + | chr4.3:17052115-17052134 | None:intergenic | 35.0% |
| ! | GCACTCGAGAAAATTTTCAA+AGG | - | chr4.3:17048450-17048469 | MS.gene08300:intron | 35.0% |
| ! | TTGATGCGAAGATTTTACAG+AGG | - | chr4.3:17046973-17046992 | MS.gene08300:CDS | 35.0% |
| ! | TTTTGTCCTCTCAAAGGATT+AGG | - | chr4.3:17052115-17052134 | MS.gene08300:intron | 35.0% |
| !! | AAATCAACTTTAAGATGGCC+TGG | + | chr4.3:17048417-17048436 | None:intergenic | 35.0% |
| !! | AATTGTGTCATGTGTTGACT+TGG | + | chr4.3:17051719-17051738 | None:intergenic | 35.0% |
| !! | AGCCTTGTTTGGTTATGATA+TGG | - | chr4.3:17047968-17047987 | MS.gene08300:intron | 35.0% |
| !! | GGCCATCTTAAAGTTGATTT+TGG | - | chr4.3:17048417-17048436 | MS.gene08300:intron | 35.0% |
| !! | TACAAGTCTTGTGACTTGTT+TGG | - | chr4.3:17048934-17048953 | MS.gene08300:intron | 35.0% |
| !!! | GGCTTCATCTTTTTCAACAT+TGG | + | chr4.3:17052266-17052285 | None:intergenic | 35.0% |
| !!! | TACAAGTCTTGCGACTTTTT+TGG | - | chr4.3:17049307-17049326 | MS.gene08300:intron | 35.0% |
| !!! | TATTTTGGAACCTATCCAAG+GGG | - | chr4.3:17048605-17048624 | MS.gene08300:CDS | 35.0% |
| !!! | TGTCCCTAATATTTTGGTCT+AGG | - | chr4.3:17052156-17052175 | MS.gene08300:intron | 35.0% |
| AACAAAACTCCACCTTCTGT+TGG | - | chr4.3:17050887-17050906 | MS.gene08300:CDS | 40.0% | |
| AACATGAGACAATAAGAGCC+TGG | + | chr4.3:17048311-17048330 | None:intergenic | 40.0% | |
| AAGACCAATCAAGGGGTTTA+AGG | + | chr4.3:17050851-17050870 | None:intergenic | 40.0% | |
| ACACCATAAGACCAATCAAG+GGG | + | chr4.3:17050858-17050877 | None:intergenic | 40.0% | |
| ACGGATCTTGCTAATTACCA+AGG | - | chr4.3:17047515-17047534 | MS.gene08300:intron | 40.0% | |
| AGACCAATCAAGGGGTTTAA+GGG | + | chr4.3:17050850-17050869 | None:intergenic | 40.0% | |
| AGACTTCTGATTCCAACAGA+AGG | + | chr4.3:17050902-17050921 | None:intergenic | 40.0% | |
| AGCAAGAACAGGAAAAATGC+TGG | - | chr4.3:17049884-17049903 | MS.gene08300:intron | 40.0% | |
| AGCTTGAAACTGACACTACA+TGG | - | chr4.3:17050133-17050152 | MS.gene08300:intron | 40.0% | |
| ATTGGACAGATCTACCCAAA+TGG | - | chr4.3:17051525-17051544 | MS.gene08300:intron | 40.0% | |
| CACACCATAAGACCAATCAA+GGG | + | chr4.3:17050859-17050878 | None:intergenic | 40.0% | |
| CAGATACTAGGGAAAGCTTT+GGG | - | chr4.3:17050648-17050667 | MS.gene08300:intron | 40.0% | |
| CATCGATATCTCAAAGAGAG+TGG | + | chr4.3:17051478-17051497 | None:intergenic | 40.0% | |
| CATTAAAGGACCAAAACCAC+GGG | + | chr4.3:17048394-17048413 | None:intergenic | 40.0% | |
| CGTTGAAGTTAGCAAGAAAG+TGG | - | chr4.3:17048030-17048049 | MS.gene08300:CDS | 40.0% | |
| CTATGCGGTACATCATACAA+AGG | + | chr4.3:17048715-17048734 | None:intergenic | 40.0% | |
| CTCTAATCTAGAAACCTGCT+AGG | + | chr4.3:17049033-17049052 | None:intergenic | 40.0% | |
| CTTGTCTGAGTCTTAGTCAA+TGG | - | chr4.3:17050405-17050424 | MS.gene08300:intron | 40.0% | |
| CTTTCAAATAACCATCTGGG+GGG | + | chr4.3:17049800-17049819 | None:intergenic | 40.0% | |
| CTTTCTTACCTTATGCACAG+TGG | + | chr4.3:17051757-17051776 | None:intergenic | 40.0% | |
| CTTTCTTGCTAACTTCAACG+CGG | + | chr4.3:17048030-17048049 | None:intergenic | 40.0% | |
| GACACTACATGGCAAGAAAT+AGG | - | chr4.3:17050144-17050163 | MS.gene08300:intron | 40.0% | |
| GCAATTTCACTAGTTCCCAT+AGG | + | chr4.3:17051078-17051097 | None:intergenic | 40.0% | |
| GCATTAAAGGACCAAAACCA+CGG | + | chr4.3:17048395-17048414 | None:intergenic | 40.0% | |
| GCTCTTATTGTCTCATGTTG+TGG | - | chr4.3:17048312-17048331 | MS.gene08300:intron | 40.0% | |
| GCTTTCAAATAACCATCTGG+GGG | + | chr4.3:17049801-17049820 | None:intergenic | 40.0% | |
| GTAGCACCAACAATTTAGAC+CGG | - | chr4.3:17047544-17047563 | MS.gene08300:CDS | 40.0% | |
| GTCAAATACTCAGCAAACAC+CGG | + | chr4.3:17047948-17047967 | None:intergenic | 40.0% | |
| GTCATTCCGGTCTAAATTGT+TGG | + | chr4.3:17047553-17047572 | None:intergenic | 40.0% | |
| GTTAGACAACGAGTTCTATG+CGG | + | chr4.3:17048730-17048749 | None:intergenic | 40.0% | |
| TAGAAACCTGCTAGGTTTCA+GGG | + | chr4.3:17049025-17049044 | None:intergenic | 40.0% | |
| TCACACCATAAGACCAATCA+AGG | + | chr4.3:17050860-17050879 | None:intergenic | 40.0% | |
| TCAGATACTAGGGAAAGCTT+TGG | - | chr4.3:17050647-17050666 | MS.gene08300:intron | 40.0% | |
| TGAGATCCAACAAGGTTCTA+AGG | - | chr4.3:17052211-17052230 | MS.gene08300:intron | 40.0% | |
| TGCATTTAACTAGGTACCAC+TGG | - | chr4.3:17050470-17050489 | MS.gene08300:intron | 40.0% | |
| TGCTTCAATGGTCGTACATT+GGG | - | chr4.3:17048336-17048355 | MS.gene08300:intron | 40.0% | |
| TGTATAAAACCTGGACAGCA+TGG | - | chr4.3:17050723-17050742 | MS.gene08300:intron | 40.0% | |
| TTAAGATGGCCTGGCATTAA+AGG | + | chr4.3:17048408-17048427 | None:intergenic | 40.0% | |
| TTCTTACCTTATGCACAGTG+GGG | + | chr4.3:17051755-17051774 | None:intergenic | 40.0% | |
| TTGGACAGATCTACCCAAAT+GGG | - | chr4.3:17051526-17051545 | MS.gene08300:intron | 40.0% | |
| TTTCACTAGTTCCCATAGGA+TGG | + | chr4.3:17051074-17051093 | None:intergenic | 40.0% | |
| TTTGTGAATCCTTGTGTCCA+TGG | - | chr4.3:17050993-17051012 | MS.gene08300:intron | 40.0% | |
| ! | AACATGTGTCAGTGTCATTC+CGG | + | chr4.3:17047566-17047585 | None:intergenic | 40.0% |
| ! | AATCACTCCATTGGGTTGTT+TGG | - | chr4.3:17047223-17047242 | MS.gene08300:intron | 40.0% |
| ! | CAAACATAAGTTGGATGGTC+AGG | + | chr4.3:17050501-17050520 | None:intergenic | 40.0% |
| ! | CATCCTTTTTGTCCTCTCAA+AGG | - | chr4.3:17052109-17052128 | MS.gene08300:intron | 40.0% |
| ! | CCGCATAGCTGCATTTATTT+TGG | - | chr4.3:17048590-17048609 | MS.gene08300:CDS | 40.0% |
| ! | CTTTAAAAGATCAGGCAGAC+AGG | - | chr4.3:17047883-17047902 | MS.gene08300:intron | 40.0% |
| ! | TACAGAGGAACCAGAACTTT+TGG | - | chr4.3:17046988-17047007 | MS.gene08300:CDS | 40.0% |
| ! | TTAGTCTTTGCAAGAAGGAC+TGG | - | chr4.3:17049115-17049134 | MS.gene08300:intron | 40.0% |
| !! | AAAAATGCTGGCTTGTGAGT+GGG | - | chr4.3:17049896-17049915 | MS.gene08300:intron | 40.0% |
| !! | AAACCCCTTGATTGGTCTTA+TGG | - | chr4.3:17050852-17050871 | MS.gene08300:CDS | 40.0% |
| !! | CAAACTGGATTAGCAAGAAC+AGG | - | chr4.3:17049873-17049892 | MS.gene08300:intron | 40.0% |
| !! | GAGTATTTGACAGCCTTGTT+TGG | - | chr4.3:17047957-17047976 | MS.gene08300:intron | 40.0% |
| AACATCATCCTGTCGTCACA+CGG | - | chr4.3:17050008-17050027 | MS.gene08300:intron | 45.0% | |
| AATTTCCAGCACATCAGCGA+GGG | + | chr4.3:17052237-17052256 | None:intergenic | 45.0% | |
| AGAAACCTGCTAGGTTTCAG+GGG | + | chr4.3:17049024-17049043 | None:intergenic | 45.0% | |
| AGAAGTTCGTCCAGATGTAG+TGG | - | chr4.3:17049920-17049939 | MS.gene08300:intron | 45.0% | |
| CACAACGATCACATGCACTA+GGG | + | chr4.3:17052313-17052332 | None:intergenic | 45.0% | |
| CCATTTGCAAGTATGCAGCT+AGG | - | chr4.3:17050443-17050462 | MS.gene08300:intron | 45.0% | |
| CCTAGCTGCATACTTGCAAA+TGG | + | chr4.3:17050446-17050465 | None:intergenic | 45.0% | |
| CCTTCAGCACCAGTATTCAT+AGG | + | chr4.3:17047999-17048018 | None:intergenic | 45.0% | |
| CTAGAAACCTGCTAGGTTTC+AGG | + | chr4.3:17049026-17049045 | None:intergenic | 45.0% | |
| CTGCTTCAATGGTCGTACAT+TGG | - | chr4.3:17048335-17048354 | MS.gene08300:intron | 45.0% | |
| CTTCTGATTCCAACAGAAGG+TGG | + | chr4.3:17050899-17050918 | None:intergenic | 45.0% | |
| GAAAGTTTGTCCCCTGTATC+AGG | - | chr4.3:17051652-17051671 | MS.gene08300:intron | 45.0% | |
| GATCACTTCAAGTGAGGCAA+TGG | + | chr4.3:17051273-17051292 | None:intergenic | 45.0% | |
| GTCCCTCAGATGAATGAAGA+TGG | - | chr4.3:17047671-17047690 | MS.gene08300:CDS | 45.0% | |
| TAAAACCTGGACAGCATGGA+AGG | - | chr4.3:17050727-17050746 | MS.gene08300:intron | 45.0% | |
| TCATGTTGTGGCTGCTTCAA+TGG | - | chr4.3:17048324-17048343 | MS.gene08300:intron | 45.0% | |
| TCTTACCTTATGCACAGTGG+GGG | + | chr4.3:17051754-17051773 | None:intergenic | 45.0% | |
| TGAACACCAACCACTACATC+TGG | + | chr4.3:17049933-17049952 | None:intergenic | 45.0% | |
| TGGCTACTCTGCAGTTAATC+AGG | - | chr4.3:17047482-17047501 | MS.gene08300:intron | 45.0% | |
| TGTGACAGTCCATCTTTGAC+CGG | - | chr4.3:17049532-17049551 | MS.gene08300:intron | 45.0% | |
| TGTGGCAACACCAAAAGTTC+TGG | + | chr4.3:17047001-17047020 | None:intergenic | 45.0% | |
| TTAAACCTTCCATGCTGTCC+AGG | + | chr4.3:17050735-17050754 | None:intergenic | 45.0% | |
| TTTACTAACCGTGTGACGAC+AGG | + | chr4.3:17050019-17050038 | None:intergenic | 45.0% | |
| ! | AATGAAGCTACCCGTGGTTT+TGG | - | chr4.3:17048381-17048400 | MS.gene08300:intron | 45.0% |
| ! | CCTATGAATACTGGTGCTGA+AGG | - | chr4.3:17047996-17048015 | MS.gene08300:CDS | 45.0% |
| ! | CCTTTTTCTGCAGTTCAGCA+GGG | + | chr4.3:17048567-17048586 | None:intergenic | 45.0% |
| ! | GTACTTCAGGTTATGCGTCT+TGG | - | chr4.3:17051895-17051914 | MS.gene08300:intron | 45.0% |
| ! | TCCTTTTTCTGCAGTTCAGC+AGG | + | chr4.3:17048568-17048587 | None:intergenic | 45.0% |
| ! | TGCTGATGGAAACTTGTTCC+AGG | - | chr4.3:17048290-17048309 | MS.gene08300:intron | 45.0% |
| ! | TTGGGAAGATGAAGAAGCGT+TGG | + | chr4.3:17047028-17047047 | None:intergenic | 45.0% |
| !! | AAGAAGAGAGACTTGCTGAG+AGG | - | chr4.3:17051294-17051313 | MS.gene08300:CDS | 45.0% |
| !! | ATACTAGGGAAAGCTTTGGG+TGG | - | chr4.3:17050651-17050670 | MS.gene08300:intron | 45.0% |
| !! | GAAAAATGCTGGCTTGTGAG+TGG | - | chr4.3:17049895-17049914 | MS.gene08300:intron | 45.0% |
| !! | GGTTTTGGTCCTTTAATGCC+AGG | - | chr4.3:17048396-17048415 | MS.gene08300:intron | 45.0% |
| !! | GTTGGTGCTACATAAAGCCT+TGG | + | chr4.3:17047535-17047554 | None:intergenic | 45.0% |
| !! | TGGGAAGATGAAGAAGCGTT+GGG | + | chr4.3:17047027-17047046 | None:intergenic | 45.0% |
| AACCTATCCAAGGGGAAGCT+GGG | - | chr4.3:17048613-17048632 | MS.gene08300:CDS | 50.0% | |
| ACAATACCCGGACCATGTGA+AGG | - | chr4.3:17051585-17051604 | MS.gene08300:intron | 50.0% | |
| AGTGCGGATGAGATCCAACA+AGG | - | chr4.3:17052203-17052222 | MS.gene08300:intron | 50.0% | |
| ATGCAAAGGGATCAGCTGTG+TGG | - | chr4.3:17047424-17047443 | MS.gene08300:intron | 50.0% | |
| CAAATGGGAGGTGAGCTTCT+CGG | - | chr4.3:17051541-17051560 | MS.gene08300:intron | 50.0% | |
| CAATTTCCAGCACATCAGCG+AGG | + | chr4.3:17052238-17052257 | None:intergenic | 50.0% | |
| CCAATCAAGGGGTTTAAGGG+CGG | + | chr4.3:17050847-17050866 | None:intergenic | 50.0% | |
| CCACAACGATCACATGCACT+AGG | + | chr4.3:17052314-17052333 | None:intergenic | 50.0% | |
| CCCTGCTGAACTGCAGAAAA+AGG | - | chr4.3:17048564-17048583 | MS.gene08300:CDS | 50.0% | |
| CCTAGTGCATGTGATCGTTG+TGG | - | chr4.3:17052311-17052330 | MS.gene08300:CDS | 50.0% | |
| CGATACAGACATGCTGACAC+CGG | + | chr4.3:17047619-17047638 | None:intergenic | 50.0% | |
| GAAACCTGCTAGGTTTCAGG+GGG | + | chr4.3:17049023-17049042 | None:intergenic | 50.0% | |
| GAACGAAAGCCGGTCAAAGA+TGG | + | chr4.3:17049544-17049563 | None:intergenic | 50.0% | |
| GACAGATCTACCCAAATGGG+AGG | - | chr4.3:17051529-17051548 | MS.gene08300:intron | 50.0% | |
| GAGAAGCTCACCTCCCATTT+GGG | + | chr4.3:17051542-17051561 | None:intergenic | 50.0% | |
| GTTCGTCCAGATGTAGTGGT+TGG | - | chr4.3:17049924-17049943 | MS.gene08300:intron | 50.0% | |
| TCAAGACATGCAAACGGCCA+TGG | + | chr4.3:17051013-17051032 | None:intergenic | 50.0% | |
| TCTGCAAGAACTGCGCTAAC+TGG | + | chr4.3:17050687-17050706 | None:intergenic | 50.0% | |
| TGCAAAGGGATCAGCTGTGT+GGG | - | chr4.3:17047425-17047444 | MS.gene08300:intron | 50.0% | |
| TGTGACAATGAAGCTACCCG+TGG | - | chr4.3:17048375-17048394 | MS.gene08300:intron | 50.0% | |
| ! | CGGTGTCAGCATGTCTGTAT+CGG | - | chr4.3:17047617-17047636 | MS.gene08300:CDS | 50.0% |
| ! | GAATACTGGTGCTGAAGGTG+TGG | - | chr4.3:17048001-17048020 | MS.gene08300:CDS | 50.0% |
| ! | GTCTGTATCGGTGCTTCGTA+AGG | - | chr4.3:17047629-17047648 | MS.gene08300:CDS | 50.0% |
| !! | TGAAGAAGCGTTGGGTTGTG+TGG | + | chr4.3:17047019-17047038 | None:intergenic | 50.0% |
| AAAGATGCTGCTCCTCCAGC+TGG | - | chr4.3:17052287-17052306 | MS.gene08300:CDS | 55.0% | |
| AACATACCCCAGCTTCCCCT+TGG | + | chr4.3:17048623-17048642 | None:intergenic | 55.0% | |
| ACCTATCCAAGGGGAAGCTG+GGG | - | chr4.3:17048614-17048633 | MS.gene08300:CDS | 55.0% | |
| AGATCAGGCAGACAGGCTGA+CGG | - | chr4.3:17047890-17047909 | MS.gene08300:intron | 55.0% | |
| ATACCCGGACCATGTGAAGG+AGG | - | chr4.3:17051588-17051607 | MS.gene08300:intron | 55.0% | |
| ATCAGCTGTGTGGGATCCAG+AGG | - | chr4.3:17047434-17047453 | MS.gene08300:intron | 55.0% | |
| CAGGTGAAAATCCCCCCAGA+TGG | - | chr4.3:17049786-17049805 | MS.gene08300:intron | 55.0% | |
| CCGCCCTTAAACCCCTTGAT+TGG | - | chr4.3:17050844-17050863 | MS.gene08300:CDS | 55.0% | |
| CGAGAAGCTCACCTCCCATT+TGG | + | chr4.3:17051543-17051562 | None:intergenic | 55.0% | |
| CGAGGGCCTTAGAACCTTGT+TGG | + | chr4.3:17052220-17052239 | None:intergenic | 55.0% | |
| CGGGGAAGAGGACTGTTCAT+TGG | - | chr4.3:17051613-17051632 | MS.gene08300:intron | 55.0% | |
| CGTTGTGGTCGAGTCGTGTA+TGG | - | chr4.3:17052326-17052345 | MS.gene08300:CDS | 55.0% | |
| GAACCTATCCAAGGGGAAGC+TGG | - | chr4.3:17048612-17048631 | MS.gene08300:CDS | 55.0% | |
| GGATGGTCAGGTCTATCCAG+TGG | + | chr4.3:17050489-17050508 | None:intergenic | 55.0% | |
| TCACTCCCCCACTGTGCATA+AGG | - | chr4.3:17051746-17051765 | MS.gene08300:intron | 55.0% | |
| TCAGCTGTGTGGGATCCAGA+GGG | - | chr4.3:17047435-17047454 | MS.gene08300:intron | 55.0% | |
| TGAGGCAATGGCAACTGCAC+TGG | + | chr4.3:17051261-17051280 | None:intergenic | 55.0% | |
| TGCAAACGGCCATGGACACA+AGG | + | chr4.3:17051005-17051024 | None:intergenic | 55.0% | |
| TGGATCTCATCCGCACTGCA+AGG | + | chr4.3:17052200-17052219 | None:intergenic | 55.0% | |
| TTGTCCCCCTGAAACCTAGC+AGG | - | chr4.3:17049016-17049035 | MS.gene08300:intron | 55.0% | |
| ! | ATGGCAACTGCACTGGCCAA+TGG | + | chr4.3:17051254-17051273 | None:intergenic | 55.0% |
| ! | GCTGGAGGAGCAGCATCTTT+TGG | + | chr4.3:17052287-17052306 | None:intergenic | 55.0% |
| !! | CTAGGGAAAGCTTTGGGTGG+AGG | - | chr4.3:17050654-17050673 | MS.gene08300:intron | 55.0% |
| ACCCCAGCTTCCCCTTGGAT+AGG | + | chr4.3:17048618-17048637 | None:intergenic | 60.0% | |
| CGCACCTCCTTCACATGGTC+CGG | + | chr4.3:17051595-17051614 | None:intergenic | 60.0% | |
| CGGACCATGTGAAGGAGGTG+CGG | - | chr4.3:17051593-17051612 | MS.gene08300:intron | 60.0% | |
| GCACCTCCTTCACATGGTCC+GGG | + | chr4.3:17051594-17051613 | None:intergenic | 60.0% | |
| TAAGGCCCTCGCTGATGTGC+TGG | - | chr4.3:17052229-17052248 | MS.gene08300:CDS | 60.0% | |
| TCACATGCACTAGGGCCAGC+TGG | + | chr4.3:17052305-17052324 | None:intergenic | 60.0% | |
| TTCCCCGCACCTCCTTCACA+TGG | + | chr4.3:17051600-17051619 | None:intergenic | 60.0% | |
| ! | GACCATGTGAAGGAGGTGCG+GGG | - | chr4.3:17051595-17051614 | MS.gene08300:intron | 60.0% |
| ! | GGACCATGTGAAGGAGGTGC+GGG | - | chr4.3:17051594-17051613 | MS.gene08300:intron | 60.0% |
| CATGCACTAGGGCCAGCTGG+AGG | + | chr4.3:17052302-17052321 | None:intergenic | 65.0% | |
| ! | GTGAAGGAGGTGCGGGGAAG+AGG | - | chr4.3:17051601-17051620 | MS.gene08300:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 17046946 | 17052352 | 17046946 | ID=MS.gene08300 |
| chr4.3 | mRNA | 17046946 | 17052352 | 17046946 | ID=MS.gene08300.t1;Parent=MS.gene08300 |
| chr4.3 | exon | 17052213 | 17052352 | 17052213 | ID=MS.gene08300.t1.exon1;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17052213 | 17052352 | 17052213 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17051795 | 17051903 | 17051795 | ID=MS.gene08300.t1.exon2;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17051795 | 17051903 | 17051795 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17051213 | 17051443 | 17051213 | ID=MS.gene08300.t1.exon3;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17051213 | 17051443 | 17051213 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17050827 | 17050986 | 17050827 | ID=MS.gene08300.t1.exon4;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17050827 | 17050986 | 17050827 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17050663 | 17050718 | 17050663 | ID=MS.gene08300.t1.exon5;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17050663 | 17050718 | 17050663 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17049357 | 17049509 | 17049357 | ID=MS.gene08300.t1.exon6;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17049357 | 17049509 | 17049357 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17048550 | 17048647 | 17048550 | ID=MS.gene08300.t1.exon7;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17048550 | 17048647 | 17048550 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17047983 | 17048063 | 17047983 | ID=MS.gene08300.t1.exon8;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17047983 | 17048063 | 17047983 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17047531 | 17047764 | 17047531 | ID=MS.gene08300.t1.exon9;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17047531 | 17047764 | 17047531 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| chr4.3 | exon | 17046946 | 17047093 | 17046946 | ID=MS.gene08300.t1.exon10;Parent=MS.gene08300.t1 |
| chr4.3 | CDS | 17046946 | 17047093 | 17046946 | ID=cds.MS.gene08300.t1;Parent=MS.gene08300.t1 |
| Gene Sequence |
| Protein sequence |
