Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043742.t1 | XP_013448465.1 | 93 | 471 | 29 | 2 | 1 | 468 | 1 | 470 | 8.70E-245 | 855.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043742.t1 | Q9M8M7 | 76.0 | 400 | 96 | 0 | 66 | 465 | 58 | 457 | 8.4e-180 | 631.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043742.t1 | A0A072TYI8 | 93.0 | 471 | 29 | 2 | 1 | 468 | 1 | 470 | 6.3e-245 | 855.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043742.t1 | MTR_7g451450 | 95.359 | 474 | 12 | 3 | 1 | 468 | 1 | 470 | 0.0 | 913 |
| MS.gene043742.t1 | MTR_3g465800 | 31.702 | 429 | 245 | 11 | 68 | 461 | 55 | 470 | 2.12e-58 | 199 |
| MS.gene043742.t1 | MTR_3g465800 | 31.951 | 410 | 234 | 10 | 84 | 461 | 3 | 399 | 2.40e-56 | 192 |
| MS.gene043742.t1 | MTR_7g072420 | 30.414 | 411 | 245 | 10 | 81 | 461 | 79 | 478 | 6.14e-50 | 177 |
| MS.gene043742.t1 | MTR_8g091660 | 28.362 | 409 | 256 | 8 | 81 | 461 | 79 | 478 | 1.28e-44 | 163 |
| MS.gene043742.t1 | MTR_4g076100 | 28.704 | 432 | 241 | 14 | 85 | 462 | 81 | 499 | 2.91e-40 | 151 |
| MS.gene043742.t1 | MTR_3g118070 | 34.448 | 299 | 169 | 10 | 85 | 369 | 19 | 304 | 4.86e-34 | 132 |
| MS.gene043742.t1 | MTR_3g118070 | 34.448 | 299 | 169 | 10 | 85 | 369 | 76 | 361 | 9.10e-34 | 132 |
| MS.gene043742.t1 | MTR_4g076100 | 28.533 | 368 | 198 | 13 | 147 | 462 | 1 | 355 | 1.46e-29 | 119 |
| MS.gene043742.t1 | MTR_8g007510 | 62.069 | 58 | 20 | 1 | 49 | 106 | 54 | 109 | 4.70e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043742.t1 | AT1G80600 | 76.000 | 400 | 96 | 0 | 66 | 465 | 58 | 457 | 0.0 | 650 |
| MS.gene043742.t1 | AT5G46180 | 30.266 | 413 | 271 | 9 | 68 | 468 | 42 | 449 | 1.42e-51 | 181 |
| MS.gene043742.t1 | AT4G39660 | 28.266 | 467 | 274 | 9 | 29 | 464 | 40 | 476 | 1.36e-49 | 176 |
| MS.gene043742.t1 | AT2G38400 | 29.736 | 454 | 270 | 12 | 38 | 461 | 40 | 474 | 9.78e-49 | 174 |
| MS.gene043742.t1 | AT2G38400 | 30.543 | 442 | 258 | 12 | 38 | 449 | 40 | 462 | 1.26e-47 | 171 |
| MS.gene043742.t1 | AT4G39660 | 29.777 | 403 | 246 | 7 | 90 | 464 | 8 | 401 | 6.98e-47 | 167 |
| MS.gene043742.t1 | AT3G08860 | 28.904 | 429 | 261 | 12 | 66 | 461 | 61 | 478 | 1.31e-46 | 168 |
| MS.gene043742.t1 | AT3G08860 | 30.216 | 417 | 241 | 14 | 66 | 446 | 61 | 463 | 1.17e-44 | 162 |
| MS.gene043742.t1 | AT3G22200 | 28.506 | 435 | 237 | 14 | 85 | 461 | 70 | 488 | 1.07e-40 | 152 |
| MS.gene043742.t1 | AT3G22200 | 28.506 | 435 | 237 | 14 | 85 | 461 | 79 | 497 | 1.33e-40 | 152 |
| MS.gene043742.t1 | AT3G48730 | 30.745 | 322 | 171 | 12 | 85 | 378 | 80 | 377 | 9.85e-34 | 132 |
| MS.gene043742.t1 | AT5G63570 | 30.421 | 309 | 166 | 10 | 85 | 368 | 19 | 303 | 4.16e-31 | 124 |
| MS.gene043742.t1 | AT5G63570 | 30.421 | 309 | 166 | 10 | 85 | 368 | 82 | 366 | 6.30e-31 | 125 |
| MS.gene043742.t1 | AT5G57590 | 24.041 | 391 | 201 | 16 | 139 | 440 | 423 | 806 | 7.42e-15 | 77.8 |
Find 110 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTCCAACATCTACTTTA+AGG | 0.107418 | 7.4:+53256887 | None:intergenic |
| AGAACTACTAAAACAGAAAT+TGG | 0.176515 | 7.4:-53252074 | MS.gene043742:CDS |
| CTTTGGGCTCATGAGGCTTT+TGG | 0.183219 | 7.4:-53252319 | MS.gene043742:CDS |
| TAGGTAGATCAGGATTTCTT+TGG | 0.249427 | 7.4:-53252336 | MS.gene043742:CDS |
| GTCGCTTCTGCTATAAATTA+TGG | 0.260232 | 7.4:-53252217 | MS.gene043742:CDS |
| GTAGACACTTGCCGAGATTC+TGG | 0.279137 | 7.4:-53251971 | MS.gene043742:CDS |
| CGCGGTGTGGGGCTAATTAT+AGG | 0.280172 | 7.4:-53252025 | MS.gene043742:CDS |
| CATCTAAAACATGCAAAGTT+TGG | 0.287499 | 7.4:+53251849 | None:intergenic |
| TGTTGAAGGGAATGAGTATT+TGG | 0.291665 | 7.4:-53256731 | MS.gene043742:CDS |
| TTCCAGCTGTCAATACTAAA+AGG | 0.294057 | 7.4:+53251948 | None:intergenic |
| TTGTAGGTTCAATGTGGTTT+AGG | 0.327079 | 7.4:-53252355 | MS.gene043742:intron |
| AGGTAGATCAGGATTTCTTT+GGG | 0.352648 | 7.4:-53252335 | MS.gene043742:CDS |
| GATCGAGGGTAGTGAAGAAT+TGG | 0.360773 | 7.4:+53256931 | None:intergenic |
| CGAAATGCTTGTGATGAAAC+TGG | 0.362484 | 7.4:-53253168 | MS.gene043742:CDS |
| CTGGAAAAGGTAATGTTGTT+AGG | 0.365988 | 7.4:-53251931 | MS.gene043742:CDS |
| TTTGGCAAGTGTCATTATAT+CGG | 0.381895 | 7.4:+53252288 | None:intergenic |
| TGCTCCAACATCTACTTTAA+GGG | 0.386778 | 7.4:+53256888 | None:intergenic |
| GGAGTGACCTTTGTAGAGTA+TGG | 0.390033 | 7.4:-53253309 | MS.gene043742:CDS |
| ATCAGAAAGGAAAGTAGGTT+TGG | 0.393617 | 7.4:+53252123 | None:intergenic |
| CAATGTGGTTTAGGTAGATC+AGG | 0.393669 | 7.4:-53252346 | MS.gene043742:CDS |
| ATCGAGGGTAGTGAAGAATT+GGG | 0.396352 | 7.4:+53256932 | None:intergenic |
| ACACTTGCCAAACCTCTTGC+TGG | 0.401411 | 7.4:-53252277 | MS.gene043742:CDS |
| TTGGCAAGTGTCATTATATC+GGG | 0.403382 | 7.4:+53252289 | None:intergenic |
| CGCTGTAGAGTTAATTCAGC+AGG | 0.404452 | 7.4:-53253274 | MS.gene043742:CDS |
| AATAGCTGCTTCATTTGCTT+CGG | 0.404945 | 7.4:+53253491 | None:intergenic |
| AAGGTCACTCCAGGCATAAC+AGG | 0.408049 | 7.4:+53253321 | None:intergenic |
| TATAGCAGAAGCGACTTTCT+CGG | 0.409460 | 7.4:+53252225 | None:intergenic |
| ACCATTGATTATAACAGAAC+AGG | 0.410210 | 7.4:-53251900 | MS.gene043742:CDS |
| TTCCCTTTCTCAAGCACAAT+CGG | 0.410612 | 7.4:+53256772 | None:intergenic |
| ACAGCTGTTGTTGATCAAGC+TGG | 0.413726 | 7.4:-53256652 | MS.gene043742:CDS |
| CTTGCTGGAGGCCTACCTAT+TGG | 0.419628 | 7.4:-53252262 | MS.gene043742:CDS |
| CTTTCTGATGTATCAAAGAA+AGG | 0.423170 | 7.4:-53252109 | MS.gene043742:CDS |
| TCCTGTTCTGTTATAATCAA+TGG | 0.426804 | 7.4:+53251899 | None:intergenic |
| TCCTCCTCTACAATTGCGTT+TGG | 0.435150 | 7.4:+53256865 | None:intergenic |
| GTTACGAGGACGGCTCCAAT+AGG | 0.437400 | 7.4:+53252247 | None:intergenic |
| GATACATCAGAAAGGAAAGT+AGG | 0.441117 | 7.4:+53252118 | None:intergenic |
| TGCTTCCATGGGAGAACCCT+GGG | 0.452270 | 7.4:-53253390 | MS.gene043742:CDS |
| ATAAGTACCCACTATGTACT+TGG | 0.457777 | 7.4:+53256804 | None:intergenic |
| AGACTGTAGAAATTCTTTAG+TGG | 0.459904 | 7.4:+53253194 | None:intergenic |
| TTGGTCATGGTGATGATGAT+TGG | 0.462669 | 7.4:-53256678 | MS.gene043742:CDS |
| GAAATGGGTGAGTTTGTTGT+TGG | 0.468980 | 7.4:+53256984 | None:intergenic |
| GCACCGATTGTGCTTGAGAA+AGG | 0.472175 | 7.4:-53256775 | MS.gene043742:CDS |
| TAGGCCTCCAGCAAGAGGTT+TGG | 0.481587 | 7.4:+53252270 | None:intergenic |
| TATTTATCACTCTCTTCCTC+AGG | 0.482900 | 7.4:-53256608 | MS.gene043742:intron |
| TTAGTATTGACAGCTGGAAA+AGG | 0.486483 | 7.4:-53251944 | MS.gene043742:CDS |
| GAACTACTAAAACAGAAATT+GGG | 0.491430 | 7.4:-53252073 | MS.gene043742:CDS |
| AGAGCAGCATTACAAATAAG+AGG | 0.492972 | 7.4:+53252166 | None:intergenic |
| GTGAAAGAGATTCGCGGTGT+GGG | 0.493187 | 7.4:-53252037 | MS.gene043742:CDS |
| AGGATTTCTTTGGGCTCATG+AGG | 0.494994 | 7.4:-53252326 | MS.gene043742:CDS |
| ACTTTAAGGGATGCGGTTGG+TGG | 0.507591 | 7.4:+53256901 | None:intergenic |
| AACATCTACTTTAAGGGATG+CGG | 0.507838 | 7.4:+53256894 | None:intergenic |
| GGGATTGCTGTTAATGCACT+TGG | 0.523563 | 7.4:-53256697 | MS.gene043742:CDS |
| CACCGATTGTGCTTGAGAAA+GGG | 0.524263 | 7.4:-53256774 | MS.gene043742:CDS |
| TGTTGTTTGCAGAAATGTGG+TGG | 0.527430 | 7.4:+53257016 | None:intergenic |
| CCAGGCATAACAGGTTCAAA+AGG | 0.533452 | 7.4:+53253330 | None:intergenic |
| GAGTATTTGGATTGTAGTGG+TGG | 0.536009 | 7.4:-53256718 | MS.gene043742:CDS |
| CTTTCTTTGATACATCAGAA+AGG | 0.539032 | 7.4:+53252110 | None:intergenic |
| GCTGTTAATGCACTTGGTCA+TGG | 0.540120 | 7.4:-53256691 | MS.gene043742:CDS |
| TGTAAAGTGTATGATGTTGA+AGG | 0.545867 | 7.4:-53256745 | MS.gene043742:CDS |
| GTAGAACCTATCCAAGGAGA+AGG | 0.546448 | 7.4:-53253231 | MS.gene043742:CDS |
| CAGCTGTTGTTGATCAAGCT+GGG | 0.547533 | 7.4:-53256651 | MS.gene043742:CDS |
| TACTCTACAAAGGTCACTCC+AGG | 0.547621 | 7.4:+53253312 | None:intergenic |
| ATACTAAAAGGCCAGAATCT+CGG | 0.551190 | 7.4:+53251960 | None:intergenic |
| CAGAAACACACTTGTACTGA+CGG | 0.555597 | 7.4:-53253450 | MS.gene043742:CDS |
| TAGAACCTATCCAAGGAGAA+GGG | 0.557559 | 7.4:-53253230 | MS.gene043742:CDS |
| CTTTAAGGGATGCGGTTGGT+GGG | 0.559069 | 7.4:+53256902 | None:intergenic |
| TGTCAAAGCAAGTGCACCCA+GGG | 0.560401 | 7.4:+53253374 | None:intergenic |
| GCTATAAATTATGGTGACCA+TGG | 0.565722 | 7.4:-53252208 | MS.gene043742:CDS |
| TTGTGTTGTTTGCAGAAATG+TGG | 0.566796 | 7.4:+53257013 | None:intergenic |
| GCATCCCTTAAAGTAGATGT+TGG | 0.569300 | 7.4:-53256892 | MS.gene043742:CDS |
| TGAAGAAGCCAAGTACATAG+TGG | 0.571534 | 7.4:-53256812 | MS.gene043742:CDS |
| AGCACTTCTTGTGTTTGATG+AGG | 0.575424 | 7.4:-53253145 | MS.gene043742:intron |
| GTGCACCCAGGGTTCTCCCA+TGG | 0.577473 | 7.4:+53253385 | None:intergenic |
| TTGCTTCCATGGGAGAACCC+TGG | 0.578747 | 7.4:-53253391 | MS.gene043742:CDS |
| GACTTTCTCGGTTACGAGGA+CGG | 0.580932 | 7.4:+53252237 | None:intergenic |
| GTTGGTGGGAGCAGTGATCG+AGG | 0.582595 | 7.4:+53256916 | None:intergenic |
| ACATAGTGGGTACTTATGCA+AGG | 0.583360 | 7.4:-53256798 | MS.gene043742:CDS |
| AGAAACACACTTGTACTGAC+GGG | 0.584743 | 7.4:-53253449 | MS.gene043742:CDS |
| CAGTGTGAAGAAGACTAAAG+AGG | 0.586691 | 7.4:-53256842 | MS.gene043742:CDS |
| AATGAGTATTTGGATTGTAG+TGG | 0.589682 | 7.4:-53256721 | MS.gene043742:CDS |
| TCGAGGGTAGTGAAGAATTG+GGG | 0.590529 | 7.4:+53256933 | None:intergenic |
| CACCTGCAAAAGTACTTCCA+TGG | 0.596537 | 7.4:+53252191 | None:intergenic |
| AAGCGACTTTCTCGGTTACG+AGG | 0.599730 | 7.4:+53252233 | None:intergenic |
| ATTGTGCTTGAGAAAGGGAA+AGG | 0.601270 | 7.4:-53256769 | MS.gene043742:CDS |
| TGAAAGAGATTCGCGGTGTG+GGG | 0.605510 | 7.4:-53252036 | MS.gene043742:CDS |
| CGTGAAAGAGATTCGCGGTG+TGG | 0.608209 | 7.4:-53252038 | MS.gene043742:CDS |
| GTTGTTTGCAGAAATGTGGT+GGG | 0.608903 | 7.4:+53257017 | None:intergenic |
| CTACTAAAACAGAAATTGGG+TGG | 0.612165 | 7.4:-53252070 | MS.gene043742:CDS |
| TTGTCAAAGCAAGTGCACCC+AGG | 0.612655 | 7.4:+53253373 | None:intergenic |
| CGACACGTGAAAGAGATTCG+CGG | 0.614914 | 7.4:-53252043 | MS.gene043742:CDS |
| ATAGGTAGGCCTCCAGCAAG+AGG | 0.618364 | 7.4:+53252265 | None:intergenic |
| GAAGAAGCCAAGTACATAGT+GGG | 0.622654 | 7.4:-53256811 | MS.gene043742:CDS |
| TGTTCTGTTATAATCAATGG+TGG | 0.622795 | 7.4:+53251902 | None:intergenic |
| ACCAAACGCAATTGTAGAGG+AGG | 0.624097 | 7.4:-53256866 | MS.gene043742:CDS |
| AGCACCAAACGCAATTGTAG+AGG | 0.630346 | 7.4:-53256869 | MS.gene043742:CDS |
| TTGGTGGGAGCAGTGATCGA+GGG | 0.633959 | 7.4:+53256917 | None:intergenic |
| GTAAAGTGTATGATGTTGAA+GGG | 0.636015 | 7.4:-53256744 | MS.gene043742:CDS |
| TCTACTTTAAGGGATGCGGT+TGG | 0.636417 | 7.4:+53256898 | None:intergenic |
| CGAGGACGGCTCCAATAGGT+AGG | 0.637097 | 7.4:+53252251 | None:intergenic |
| AGAACCTATCCAAGGAGAAG+GGG | 0.639140 | 7.4:-53253229 | MS.gene043742:CDS |
| CATAGTGGGTACTTATGCAA+GGG | 0.639478 | 7.4:-53256797 | MS.gene043742:CDS |
| TGCATTTCCATACTCTACAA+AGG | 0.643231 | 7.4:+53253302 | None:intergenic |
| AGTATTTGGATTGTAGTGGT+GGG | 0.647378 | 7.4:-53256717 | MS.gene043742:CDS |
| GAACCTATCCAAGGAGAAGG+GGG | 0.649216 | 7.4:-53253228 | MS.gene043742:CDS |
| TGACGGGAAAGTTCCAGCCA+CGG | 0.668642 | 7.4:-53253433 | MS.gene043742:CDS |
| CTTGCCAAACCTCTTGCTGG+AGG | 0.671134 | 7.4:-53252274 | MS.gene043742:CDS |
| CTGCTGAATTAACTCTACAG+CGG | 0.672660 | 7.4:+53253275 | None:intergenic |
| TGGCAAGTGTCATTATATCG+GGG | 0.674684 | 7.4:+53252290 | None:intergenic |
| GCTGTAGAGTTAATTCAGCA+GGG | 0.677718 | 7.4:-53253273 | MS.gene043742:CDS |
| AGTGTCTACAAACGATGTCG+CGG | 0.697983 | 7.4:+53251985 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTGTTTAGAAATTTT+AGG | - | chr7.4:53255005-53255024 | MS.gene043742:intron | 10.0% |
| !! | AGTTGTTTATTGTAAATAAT+TGG | - | chr7.4:53253003-53253022 | MS.gene043742:intron | 15.0% |
| !! | ATTTGTTTGAATTAAGATAA+TGG | - | chr7.4:53252940-53252959 | MS.gene043742:intron | 15.0% |
| !! | GCTAAATATTTAATTAACTT+CGG | + | chr7.4:53254536-53254555 | None:intergenic | 15.0% |
| !! | TCTTTAATAGTAGAAATAAA+GGG | - | chr7.4:53252360-53252379 | MS.gene043742:intron | 15.0% |
| !!! | AATAAATAAAGGTATACTAA+TGG | + | chr7.4:53256205-53256224 | None:intergenic | 15.0% |
| !!! | ATAAAATTGAAAGCTTTAAT+AGG | - | chr7.4:53254919-53254938 | MS.gene043742:intron | 15.0% |
| !! | ATATTTAGACAAAAGCAAAA+AGG | + | chr7.4:53253039-53253058 | None:intergenic | 20.0% |
| !! | ATATTTGCAATTGTTTCAAT+TGG | - | chr7.4:53256443-53256462 | MS.gene043742:intron | 20.0% |
| !! | CATGTTATTATTTGATAAAG+CGG | - | chr7.4:53254376-53254395 | MS.gene043742:intron | 20.0% |
| !! | CTTAAACAACACTTAATATA+AGG | - | chr7.4:53256352-53256371 | MS.gene043742:intron | 20.0% |
| !! | CTTTAATAGTAGAAATAAAG+GGG | - | chr7.4:53252361-53252380 | MS.gene043742:intron | 20.0% |
| !! | GTCTTTAATAGTAGAAATAA+AGG | - | chr7.4:53252359-53252378 | MS.gene043742:intron | 20.0% |
| !! | TAAAAAACCCTGAAAAATTA+GGG | + | chr7.4:53252304-53252323 | None:intergenic | 20.0% |
| !! | TAATTATGATAATTGACAGA+TGG | - | chr7.4:53254224-53254243 | MS.gene043742:intron | 20.0% |
| !! | TTGTTAAAATGGTGTATAAA+AGG | - | chr7.4:53253477-53253496 | MS.gene043742:CDS | 20.0% |
| !! | TTTACAAAAGTTAGATAATG+AGG | + | chr7.4:53253658-53253677 | None:intergenic | 20.0% |
| !! | TTTAGTGTAATTATATGTGT+TGG | - | chr7.4:53252603-53252622 | MS.gene043742:intron | 20.0% |
| !!! | AGTATTATTTTACTGACTTT+TGG | - | chr7.4:53253399-53253418 | MS.gene043742:CDS | 20.0% |
| !!! | AGTTATTTTTAGATCAGTAA+TGG | - | chr7.4:53253295-53253314 | MS.gene043742:CDS | 20.0% |
| !!! | ATTTTTTCCCTAATTTTTCA+GGG | - | chr7.4:53252294-53252313 | MS.gene043742:CDS | 20.0% |
| !!! | CATTTTTTTTAAAATAGCCT+TGG | + | chr7.4:53255873-53255892 | None:intergenic | 20.0% |
| !!! | CTTATATTAAGTGTTGTTTA+AGG | + | chr7.4:53256354-53256373 | None:intergenic | 20.0% |
| !!! | GTGCTTAAATTTTGTTAAAA+TGG | - | chr7.4:53253466-53253485 | MS.gene043742:CDS | 20.0% |
| !!! | TCATTTCTATATGATTTTGT+AGG | - | chr7.4:53256491-53256510 | MS.gene043742:intron | 20.0% |
| !!! | TTTAGATATAATTTGTGTTG+TGG | - | chr7.4:53252860-53252879 | MS.gene043742:intron | 20.0% |
| ! | AAATTGTCAGAAAAATAAGG+TGG | - | chr7.4:53254843-53254862 | MS.gene043742:intron | 25.0% |
| ! | AACACACTTCAAAATTATGT+AGG | + | chr7.4:53256412-53256431 | None:intergenic | 25.0% |
| ! | AAGTACATCAGAAATTGAAA+TGG | - | chr7.4:53255943-53255962 | MS.gene043742:intron | 25.0% |
| ! | AATCAATGTATGCAATTATG+GGG | - | chr7.4:53253906-53253925 | MS.gene043742:intron | 25.0% |
| ! | ACAATCAATGTATGCAATTA+TGG | - | chr7.4:53253904-53253923 | MS.gene043742:intron | 25.0% |
| ! | ACACGAGTACTATTATTAAA+GGG | - | chr7.4:53256255-53256274 | MS.gene043742:intron | 25.0% |
| ! | ACATGAGACACAATAAATAA+AGG | + | chr7.4:53256216-53256235 | None:intergenic | 25.0% |
| ! | AGAACTACTAAAACAGAAAT+TGG | - | chr7.4:53256788-53256807 | MS.gene043742:CDS | 25.0% |
| ! | ATAGAAATTAGTACACTCAA+TGG | - | chr7.4:53256306-53256325 | MS.gene043742:intron | 25.0% |
| ! | ATATAAGGACGTTTAATATG+AGG | - | chr7.4:53256367-53256386 | MS.gene043742:intron | 25.0% |
| ! | ATTTCTATGAGTTCATATCT+TGG | - | chr7.4:53255205-53255224 | MS.gene043742:intron | 25.0% |
| ! | ATTTCTGATGTACTTAATAG+TGG | + | chr7.4:53255938-53255957 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAAATACACGAT+CGG | + | chr7.4:53255344-53255363 | None:intergenic | 25.0% |
| ! | CAATCAATGTATGCAATTAT+GGG | - | chr7.4:53253905-53253924 | MS.gene043742:intron | 25.0% |
| ! | CTAAAAAACCCTGAAAAATT+AGG | + | chr7.4:53252305-53252324 | None:intergenic | 25.0% |
| ! | CTCTTTGTATTTCCATTTAT+CGG | - | chr7.4:53255091-53255110 | MS.gene043742:intron | 25.0% |
| ! | GAACTACTAAAACAGAAATT+GGG | - | chr7.4:53256789-53256808 | MS.gene043742:CDS | 25.0% |
| ! | TACACGAGTACTATTATTAA+AGG | - | chr7.4:53256254-53256273 | MS.gene043742:intron | 25.0% |
| ! | TAGAAAGGAGTTTAATTGTT+GGG | - | chr7.4:53252970-53252989 | MS.gene043742:intron | 25.0% |
| ! | TTAGAAAGGAGTTTAATTGT+TGG | - | chr7.4:53252969-53252988 | MS.gene043742:intron | 25.0% |
| ! | TTATGCATCTCCATAATTTA+CGG | + | chr7.4:53254899-53254918 | None:intergenic | 25.0% |
| ! | TTTAACAGCATCAAATGTAA+TGG | + | chr7.4:53253819-53253838 | None:intergenic | 25.0% |
| ! | TTTCTATGAGTTCATATCTT+GGG | - | chr7.4:53255206-53255225 | MS.gene043742:intron | 25.0% |
| ! | TTTCTGATGTACTTAATAGT+GGG | + | chr7.4:53255937-53255956 | None:intergenic | 25.0% |
| !! | AGACATTGAAGCATTTAATA+TGG | - | chr7.4:53254277-53254296 | MS.gene043742:intron | 25.0% |
| !! | ATAGTTTTTCTTCCGATAAA+TGG | + | chr7.4:53255106-53255125 | None:intergenic | 25.0% |
| !! | TAGAAGTTGGTTAATATGTT+GGG | - | chr7.4:53254765-53254784 | MS.gene043742:intron | 25.0% |
| !! | TCACATTTAAAACTTGGAAA+AGG | + | chr7.4:53253970-53253989 | None:intergenic | 25.0% |
| !! | TTACCTTAAAGTCTTTTTGA+AGG | - | chr7.4:53253423-53253442 | MS.gene043742:CDS | 25.0% |
| !!! | ACAAAGTATTGCTTCATAAT+TGG | + | chr7.4:53253855-53253874 | None:intergenic | 25.0% |
| !!! | CATTTTTTCCCTAATTTTTC+AGG | - | chr7.4:53252293-53252312 | MS.gene043742:CDS | 25.0% |
| !!! | CTAAAAATCCCTTTTTTTGT+TGG | + | chr7.4:53252845-53252864 | None:intergenic | 25.0% |
| !!! | TTCCAAGTTTTAAATGTGAT+GGG | - | chr7.4:53253971-53253990 | MS.gene043742:intron | 25.0% |
| !!! | TTTCCAAGTTTTAAATGTGA+TGG | - | chr7.4:53253970-53253989 | MS.gene043742:intron | 25.0% |
| AAAAACTATAGTGCGGAAAA+AGG | - | chr7.4:53255117-53255136 | MS.gene043742:intron | 30.0% | |
| AAATCTCTCACAATTCTAGT+GGG | - | chr7.4:53253067-53253086 | MS.gene043742:intron | 30.0% | |
| AACCTTGCATATATTATGCA+AGG | + | chr7.4:53252426-53252445 | None:intergenic | 30.0% | |
| AATCAGTGTATGCAATTATG+AGG | - | chr7.4:53253995-53254014 | MS.gene043742:intron | 30.0% | |
| AATGAGTATTTGGATTGTAG+TGG | - | chr7.4:53252141-53252160 | MS.gene043742:CDS | 30.0% | |
| AATTCTGGATGTCATAAGAA+TGG | - | chr7.4:53254442-53254461 | MS.gene043742:intron | 30.0% | |
| ACATCAGAAATTGAAATGGT+TGG | - | chr7.4:53255947-53255966 | MS.gene043742:intron | 30.0% | |
| AGACTGTAGAAATTCTTTAG+TGG | + | chr7.4:53255671-53255690 | None:intergenic | 30.0% | |
| AGGTATGTACTATCTAATCT+TGG | - | chr7.4:53255737-53255756 | MS.gene043742:intron | 30.0% | |
| AGTGAAGAACCAACAAAAAA+AGG | - | chr7.4:53252833-53252852 | MS.gene043742:intron | 30.0% | |
| ATAATGCTTCGGATTGAATA+AGG | - | chr7.4:53254600-53254619 | MS.gene043742:intron | 30.0% | |
| ATAATTGACAGATGGTGATA+CGG | - | chr7.4:53254232-53254251 | MS.gene043742:intron | 30.0% | |
| CATATAGTTATGATTACCTG+AGG | + | chr7.4:53252273-53252292 | None:intergenic | 30.0% | |
| CTAACAACAGCATATACTTA+GGG | + | chr7.4:53254030-53254049 | None:intergenic | 30.0% | |
| CTTTCTGATGTATCAAAGAA+AGG | - | chr7.4:53256753-53256772 | MS.gene043742:CDS | 30.0% | |
| CTTTCTTTGATACATCAGAA+AGG | + | chr7.4:53256755-53256774 | None:intergenic | 30.0% | |
| GCGAAATTGTCAGAAAAATA+AGG | - | chr7.4:53254840-53254859 | MS.gene043742:intron | 30.0% | |
| GTAAAGTGTATGATGTTGAA+GGG | - | chr7.4:53252118-53252137 | MS.gene043742:CDS | 30.0% | |
| GTCATCTCAATTTGACAAAA+AGG | + | chr7.4:53254660-53254679 | None:intergenic | 30.0% | |
| GTGAAGAACCAACAAAAAAA+GGG | - | chr7.4:53252834-53252853 | MS.gene043742:intron | 30.0% | |
| GTGTATAATCTCAAATGAAG+AGG | - | chr7.4:53254349-53254368 | MS.gene043742:intron | 30.0% | |
| GTTCCTTCAAAAAGACTTTA+AGG | + | chr7.4:53253429-53253448 | None:intergenic | 30.0% | |
| TAAAGTATAGGTAGTGAAGT+AGG | - | chr7.4:53254492-53254511 | MS.gene043742:intron | 30.0% | |
| TACTATCTAATCTTGGTATC+CGG | - | chr7.4:53255744-53255763 | MS.gene043742:intron | 30.0% | |
| TATAATCTCAAATGAAGAGG+TGG | - | chr7.4:53254352-53254371 | MS.gene043742:intron | 30.0% | |
| TCCTGTTCTGTTATAATCAA+TGG | + | chr7.4:53256966-53256985 | None:intergenic | 30.0% | |
| TCTAACAACAGCATATACTT+AGG | + | chr7.4:53254031-53254050 | None:intergenic | 30.0% | |
| TCTCCAAAATTAGAATAACG+AGG | + | chr7.4:53253940-53253959 | None:intergenic | 30.0% | |
| TGAAAAAGTGAGAATGTGAT+GGG | - | chr7.4:53253136-53253155 | MS.gene043742:intron | 30.0% | |
| TGATTCTCTCAAATCATTAG+CGG | + | chr7.4:53252578-53252597 | None:intergenic | 30.0% | |
| TGCATAATATATGCAAGGTT+CGG | - | chr7.4:53252426-53252445 | MS.gene043742:intron | 30.0% | |
| TGTAAAACTTTAGTAGTGAG+AGG | - | chr7.4:53253727-53253746 | MS.gene043742:intron | 30.0% | |
| TGTAAAGTGTATGATGTTGA+AGG | - | chr7.4:53252117-53252136 | MS.gene043742:CDS | 30.0% | |
| TGTTCTGTTATAATCAATGG+TGG | + | chr7.4:53256963-53256982 | None:intergenic | 30.0% | |
| TTACATTGACATGTATAGAC+TGG | - | chr7.4:53252502-53252521 | MS.gene043742:intron | 30.0% | |
| TTGTTTCATGAAGGTTATTG+AGG | - | chr7.4:53254405-53254424 | MS.gene043742:intron | 30.0% | |
| ! | AATCCGAAGCATTATTAGAA+GGG | + | chr7.4:53254595-53254614 | None:intergenic | 30.0% |
| ! | AATGTAATTTGCACTATGCT+CGG | + | chr7.4:53253764-53253783 | None:intergenic | 30.0% |
| ! | AATTTGTTTAGAACTGATGC+AGG | - | chr7.4:53255282-53255301 | MS.gene043742:intron | 30.0% |
| ! | ACCATTGATTATAACAGAAC+AGG | - | chr7.4:53256962-53256981 | MS.gene043742:CDS | 30.0% |
| ! | ATAATTTGTGTTGTGGTGTT+TGG | - | chr7.4:53252867-53252886 | MS.gene043742:intron | 30.0% |
| ! | ATGATTTTGTAGGTTCAATG+TGG | - | chr7.4:53256501-53256520 | MS.gene043742:intron | 30.0% |
| ! | CATCTAAAACATGCAAAGTT+TGG | + | chr7.4:53257016-53257035 | None:intergenic | 30.0% |
| ! | CTGAACTTCTTTAGAAAATG+AGG | - | chr7.4:53253202-53253221 | MS.gene043742:CDS | 30.0% |
| ! | GAAACTATTTTCTGTTCTGA+AGG | - | chr7.4:53254958-53254977 | MS.gene043742:intron | 30.0% |
| ! | GTAATTATATGTGTTGGTGT+CGG | - | chr7.4:53252609-53252628 | MS.gene043742:intron | 30.0% |
| ! | GTAGAAGTTGGTTAATATGT+TGG | - | chr7.4:53254764-53254783 | MS.gene043742:intron | 30.0% |
| ! | GTTGTTGTTGTTGTTGAAAT+GGG | + | chr7.4:53251896-53251915 | None:intergenic | 30.0% |
| ! | TAATTTGTGTTGTGGTGTTT+GGG | - | chr7.4:53252868-53252887 | MS.gene043742:intron | 30.0% |
| ! | TGCTAGATTCTTTCTGTTTT+TGG | - | chr7.4:53252325-53252344 | MS.gene043742:CDS | 30.0% |
| ! | TGTACTTTTAGATAGACCTA+TGG | - | chr7.4:53254800-53254819 | MS.gene043742:intron | 30.0% |
| ! | TGTTGTTGTTGTTGTTGAAA+TGG | + | chr7.4:53251897-53251916 | None:intergenic | 30.0% |
| ! | TTTGGCAAGTGTCATTATAT+CGG | + | chr7.4:53256577-53256596 | None:intergenic | 30.0% |
| !! | AGTGTGTTTCTGATATTTTC+TGG | + | chr7.4:53255404-53255423 | None:intergenic | 30.0% |
| !! | CTGATTCCTTCTAAAATTAG+GGG | + | chr7.4:53254090-53254109 | None:intergenic | 30.0% |
| !! | GACCTAAAATTAACTTGCAT+TGG | + | chr7.4:53254718-53254737 | None:intergenic | 30.0% |
| !! | GCTGATTCCTTCTAAAATTA+GGG | + | chr7.4:53254091-53254110 | None:intergenic | 30.0% |
| !!! | CGTGTATTTTTTGCAAATTC+TGG | - | chr7.4:53255346-53255365 | MS.gene043742:intron | 30.0% |
| AAAAATAAGGTGGAAGGAAG+GGG | - | chr7.4:53254853-53254872 | MS.gene043742:intron | 35.0% | |
| AAACTCGCTTCTTTGTTCAT+TGG | - | chr7.4:53254740-53254759 | MS.gene043742:intron | 35.0% | |
| AACTCGCTTCTTTGTTCATT+GGG | - | chr7.4:53254741-53254760 | MS.gene043742:intron | 35.0% | |
| AAGCAGATAAAAGACTTGAG+TGG | + | chr7.4:53256080-53256099 | None:intergenic | 35.0% | |
| AAGTTTCACTGTAGAGCAAA+CGG | + | chr7.4:53253625-53253644 | None:intergenic | 35.0% | |
| AATAGCTGCTTCATTTGCTT+CGG | + | chr7.4:53255374-53255393 | None:intergenic | 35.0% | |
| AATCTCTCACAATTCTAGTG+GGG | - | chr7.4:53253068-53253087 | MS.gene043742:intron | 35.0% | |
| ACGTGACACTTAATATGAAC+AGG | + | chr7.4:53256114-53256133 | None:intergenic | 35.0% | |
| AGAAAAATAAGGTGGAAGGA+AGG | - | chr7.4:53254851-53254870 | MS.gene043742:intron | 35.0% | |
| AGAAAAGAGAAAGAGAGGAA+AGG | - | chr7.4:53253168-53253187 | MS.gene043742:CDS | 35.0% | |
| AGAGCAGCATTACAAATAAG+AGG | + | chr7.4:53256699-53256718 | None:intergenic | 35.0% | |
| AGGTAGATCAGGATTTCTTT+GGG | - | chr7.4:53256527-53256546 | MS.gene043742:intron | 35.0% | |
| AGTATTTGGATTGTAGTGGT+GGG | - | chr7.4:53252145-53252164 | MS.gene043742:CDS | 35.0% | |
| ATAAGTACCCACTATGTACT+TGG | + | chr7.4:53252061-53252080 | None:intergenic | 35.0% | |
| ATACTAAAAGGCCAGAATCT+CGG | + | chr7.4:53256905-53256924 | None:intergenic | 35.0% | |
| ATAGTACTCGTGTAGCAATT+AGG | + | chr7.4:53256248-53256267 | None:intergenic | 35.0% | |
| ATATTGATCTTCGAGAACTC+TGG | + | chr7.4:53254316-53254335 | None:intergenic | 35.0% | |
| ATCAGAAAGGAAAGTAGGTT+TGG | + | chr7.4:53256742-53256761 | None:intergenic | 35.0% | |
| ATGCCCTTCTAATAATGCTT+CGG | - | chr7.4:53254589-53254608 | MS.gene043742:intron | 35.0% | |
| ATTGAGATCTACCGTCATAA+AGG | + | chr7.4:53254067-53254086 | None:intergenic | 35.0% | |
| CATAATATATGCAAGGTTCG+GGG | - | chr7.4:53252428-53252447 | MS.gene043742:intron | 35.0% | |
| CCAACACCAATACAAAATTG+AGG | + | chr7.4:53252740-53252759 | None:intergenic | 35.0% | |
| CTACTAAAACAGAAATTGGG+TGG | - | chr7.4:53256792-53256811 | MS.gene043742:CDS | 35.0% | |
| CTGGAAAAGGTAATGTTGTT+AGG | - | chr7.4:53256931-53256950 | MS.gene043742:CDS | 35.0% | |
| GAAAAATAAGGTGGAAGGAA+GGG | - | chr7.4:53254852-53254871 | MS.gene043742:intron | 35.0% | |
| GAAAAGAGAAAGAGAGGAAA+GGG | - | chr7.4:53253169-53253188 | MS.gene043742:CDS | 35.0% | |
| GAAATACAAAGAGTGAAGCA+GGG | + | chr7.4:53255084-53255103 | None:intergenic | 35.0% | |
| GAAATCTCTCACAATTCTAG+TGG | - | chr7.4:53253066-53253085 | MS.gene043742:intron | 35.0% | |
| GAACCACAGAGATTCTTAAT+AGG | + | chr7.4:53255143-53255162 | None:intergenic | 35.0% | |
| GACATGATGTACTCATTTAC+TGG | + | chr7.4:53255783-53255802 | None:intergenic | 35.0% | |
| GACCTTGCATAATATATGCA+AGG | - | chr7.4:53252421-53252440 | MS.gene043742:intron | 35.0% | |
| GATACATCAGAAAGGAAAGT+AGG | + | chr7.4:53256747-53256766 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTTC+GGG | - | chr7.4:53252427-53252446 | MS.gene043742:intron | 35.0% | |
| GCTATAAATTATGGTGACCA+TGG | - | chr7.4:53256654-53256673 | MS.gene043742:CDS | 35.0% | |
| GTAGGAAAGAGAGATAGAAA+GGG | - | chr7.4:53253097-53253116 | MS.gene043742:intron | 35.0% | |
| GTCGCTTCTGCTATAAATTA+TGG | - | chr7.4:53256645-53256664 | MS.gene043742:CDS | 35.0% | |
| GTGAAAAAGTGAGAATGTGA+TGG | - | chr7.4:53253135-53253154 | MS.gene043742:intron | 35.0% | |
| GTTGGTTAATATGTTGGGTA+AGG | - | chr7.4:53254770-53254789 | MS.gene043742:intron | 35.0% | |
| TAACCTATGAAGCATGGATA+TGG | - | chr7.4:53252525-53252544 | MS.gene043742:intron | 35.0% | |
| TAAGGACGTTTAATATGAGG+TGG | - | chr7.4:53256370-53256389 | MS.gene043742:intron | 35.0% | |
| TAGGTAGATCAGGATTTCTT+TGG | - | chr7.4:53256526-53256545 | MS.gene043742:intron | 35.0% | |
| TATTTATCACTCTCTTCCTC+AGG | - | chr7.4:53252254-53252273 | MS.gene043742:CDS | 35.0% | |
| TCGGAAGAAAAACTATAGTG+CGG | - | chr7.4:53255110-53255129 | MS.gene043742:intron | 35.0% | |
| TGCATTTCCATACTCTACAA+AGG | + | chr7.4:53255563-53255582 | None:intergenic | 35.0% | |
| TGCTCCAACATCTACTTTAA+GGG | + | chr7.4:53251977-53251996 | None:intergenic | 35.0% | |
| TGTAGGAAAGAGAGATAGAA+AGG | - | chr7.4:53253096-53253115 | MS.gene043742:intron | 35.0% | |
| TGTCAGAAAAATAAGGTGGA+AGG | - | chr7.4:53254847-53254866 | MS.gene043742:intron | 35.0% | |
| TGTTGAAGGGAATGAGTATT+TGG | - | chr7.4:53252131-53252150 | MS.gene043742:CDS | 35.0% | |
| TTCCAGCTGTCAATACTAAA+AGG | + | chr7.4:53256917-53256936 | None:intergenic | 35.0% | |
| TTGAGATCTACCGTCATAAA+GGG | + | chr7.4:53254066-53254085 | None:intergenic | 35.0% | |
| TTGTAGGTTCAATGTGGTTT+AGG | - | chr7.4:53256507-53256526 | MS.gene043742:intron | 35.0% | |
| TTTGCATATGTAACCAAAGC+AGG | - | chr7.4:53255840-53255859 | MS.gene043742:intron | 35.0% | |
| ! | AACATCTACTTTAAGGGATG+CGG | + | chr7.4:53251971-53251990 | None:intergenic | 35.0% |
| ! | ACTTGTTTAAAGTCAGAGTG+TGG | + | chr7.4:53253789-53253808 | None:intergenic | 35.0% |
| ! | ATGAACAAAGAAGCGAGTTT+TGG | + | chr7.4:53254740-53254759 | None:intergenic | 35.0% |
| ! | ATGTAATTTGCACTATGCTC+GGG | + | chr7.4:53253763-53253782 | None:intergenic | 35.0% |
| ! | CAATCCGAAGCATTATTAGA+AGG | + | chr7.4:53254596-53254615 | None:intergenic | 35.0% |
| ! | CCATTTTCTCAAAATGCTAC+TGG | + | chr7.4:53252694-53252713 | None:intergenic | 35.0% |
| ! | CGCCAATGCAAGTTAATTTT+AGG | - | chr7.4:53254713-53254732 | MS.gene043742:intron | 35.0% |
| ! | CTCAATCCCCTAATTTTAGA+AGG | - | chr7.4:53254081-53254100 | MS.gene043742:intron | 35.0% |
| ! | CTTTTAGCAATTGCTTCCAT+GGG | - | chr7.4:53255461-53255480 | MS.gene043742:intron | 35.0% |
| ! | GATAATGGCTTGTCTTAGAA+AGG | - | chr7.4:53252955-53252974 | MS.gene043742:intron | 35.0% |
| ! | GCATTTAATATGGTTTGCAG+AGG | - | chr7.4:53254287-53254306 | MS.gene043742:intron | 35.0% |
| ! | GTGCCTCGTTATTCTAATTT+TGG | - | chr7.4:53253934-53253953 | MS.gene043742:intron | 35.0% |
| ! | GTTTTTGTAGAACCTATCCA+AGG | - | chr7.4:53255625-53255644 | MS.gene043742:intron | 35.0% |
| ! | TCAATGTAAGTTTCGAGTGT+CGG | + | chr7.4:53252491-53252510 | None:intergenic | 35.0% |
| ! | TGCATGCCTCAATTTTGTAT+TGG | - | chr7.4:53252731-53252750 | MS.gene043742:intron | 35.0% |
| ! | TGCCCATCACATTTAAAACT+TGG | + | chr7.4:53253976-53253995 | None:intergenic | 35.0% |
| ! | TTGGCAAGTGTCATTATATC+GGG | + | chr7.4:53256576-53256595 | None:intergenic | 35.0% |
| !! | AGTCTTTTTGAAGGAACGAA+CGG | - | chr7.4:53253432-53253451 | MS.gene043742:CDS | 35.0% |
| !! | CCAGTAGCATTTTGAGAAAA+TGG | - | chr7.4:53252691-53252710 | MS.gene043742:intron | 35.0% |
| !! | CCTCAATTTTGTATTGGTGT+TGG | - | chr7.4:53252737-53252756 | MS.gene043742:intron | 35.0% |
| !! | GGCTGATTCCTTCTAAAATT+AGG | + | chr7.4:53254092-53254111 | None:intergenic | 35.0% |
| !! | TTAGTATTGACAGCTGGAAA+AGG | - | chr7.4:53256918-53256937 | MS.gene043742:CDS | 35.0% |
| !! | TTGTGTTGTTTGCAGAAATG+TGG | + | chr7.4:53251852-53251871 | None:intergenic | 35.0% |
| !!! | ACTTCATCCTTTTTTTCTGG+TGG | + | chr7.4:53252467-53252486 | None:intergenic | 35.0% |
| !!! | CTTCATCCTTTTTTTCTGGT+GGG | + | chr7.4:53252466-53252485 | None:intergenic | 35.0% |
| !!! | GGTACTTCATCCTTTTTTTC+TGG | + | chr7.4:53252470-53252489 | None:intergenic | 35.0% |
| AAACCATGTCTCTGTTCACA+CGG | - | chr7.4:53254182-53254201 | MS.gene043742:intron | 40.0% | |
| ACACTCATAGTGTTAGACAC+TGG | - | chr7.4:53252760-53252779 | MS.gene043742:intron | 40.0% | |
| ACTCGCTTCTTTGTTCATTG+GGG | - | chr7.4:53254742-53254761 | MS.gene043742:intron | 40.0% | |
| AGATTCATTGCAGGTACATG+TGG | - | chr7.4:53254132-53254151 | MS.gene043742:intron | 40.0% | |
| AGCACTTCTTGTGTTTGATG+AGG | - | chr7.4:53255717-53255736 | MS.gene043742:intron | 40.0% | |
| AGGAATCAGCCAATGTTAAG+TGG | - | chr7.4:53254101-53254120 | MS.gene043742:intron | 40.0% | |
| AGGCCTATTAAGAATCTCTG+TGG | - | chr7.4:53255137-53255156 | MS.gene043742:intron | 40.0% | |
| ATCGAGGGTAGTGAAGAATT+GGG | + | chr7.4:53251933-53251952 | None:intergenic | 40.0% | |
| ATGCTGTTAAAAGAGAGCCA+GGG | - | chr7.4:53253828-53253847 | MS.gene043742:intron | 40.0% | |
| ATGTATAGAACTTTCTCCGC+TGG | + | chr7.4:53254684-53254703 | None:intergenic | 40.0% | |
| ATTCCTCTTTAGTCAGCATC+TGG | - | chr7.4:53253348-53253367 | MS.gene043742:CDS | 40.0% | |
| ATTGCTTCATAATTGGACCC+TGG | + | chr7.4:53253848-53253867 | None:intergenic | 40.0% | |
| ATTGTGCTTGAGAAAGGGAA+AGG | - | chr7.4:53252093-53252112 | MS.gene043742:CDS | 40.0% | |
| CAATGTGGTTTAGGTAGATC+AGG | - | chr7.4:53256516-53256535 | MS.gene043742:intron | 40.0% | |
| CAGAAACACACTTGTACTGA+CGG | - | chr7.4:53255412-53255431 | MS.gene043742:intron | 40.0% | |
| CAGTGTGAAGAAGACTAAAG+AGG | - | chr7.4:53252020-53252039 | MS.gene043742:CDS | 40.0% | |
| CGAAATGCTTGTGATGAAAC+TGG | - | chr7.4:53255694-53255713 | MS.gene043742:intron | 40.0% | |
| CGATGTCGATGGTAAAGTAT+AGG | - | chr7.4:53254480-53254499 | MS.gene043742:intron | 40.0% | |
| CTGCTGAATTAACTCTACAG+CGG | + | chr7.4:53255590-53255609 | None:intergenic | 40.0% | |
| GAAGAAGCCAAGTACATAGT+GGG | - | chr7.4:53252051-53252070 | MS.gene043742:CDS | 40.0% | |
| GACGTTTAATATGAGGTGGA+GGG | - | chr7.4:53256374-53256393 | MS.gene043742:intron | 40.0% | |
| GAGGACTGAACTATAAACTG+TGG | - | chr7.4:53253221-53253240 | MS.gene043742:CDS | 40.0% | |
| GAGTATTTGGATTGTAGTGG+TGG | - | chr7.4:53252144-53252163 | MS.gene043742:CDS | 40.0% | |
| GCATCCCTTAAAGTAGATGT+TGG | - | chr7.4:53251970-53251989 | MS.gene043742:CDS | 40.0% | |
| GCTAAAAGCTAAAAACTCCG+TGG | + | chr7.4:53255449-53255468 | None:intergenic | 40.0% | |
| GCTGTAGAGTTAATTCAGCA+GGG | - | chr7.4:53255589-53255608 | MS.gene043742:intron | 40.0% | |
| GGAAATACAAAGAGTGAAGC+AGG | + | chr7.4:53255085-53255104 | None:intergenic | 40.0% | |
| GGATGTCATAAGAATGGTTG+AGG | - | chr7.4:53254448-53254467 | MS.gene043742:intron | 40.0% | |
| GTATGTGAAGCCCTTTATGA+CGG | - | chr7.4:53254053-53254072 | MS.gene043742:intron | 40.0% | |
| GTCATAAGAATGGTTGAGGA+AGG | - | chr7.4:53254452-53254471 | MS.gene043742:intron | 40.0% | |
| GTCTGCATCTGATTGAATTC+TGG | - | chr7.4:53254427-53254446 | MS.gene043742:intron | 40.0% | |
| GTGCTCCAACATCTACTTTA+AGG | + | chr7.4:53251978-53251997 | None:intergenic | 40.0% | |
| GTGGTAGAAAAGAGAAAGAG+AGG | - | chr7.4:53253163-53253182 | MS.gene043742:CDS | 40.0% | |
| GTTGTTTGCAGAAATGTGGT+GGG | + | chr7.4:53251848-53251867 | None:intergenic | 40.0% | |
| GTTTGCTCTACAGTGAAACT+TGG | - | chr7.4:53253624-53253643 | MS.gene043742:intron | 40.0% | |
| TAGAACCTATCCAAGGAGAA+GGG | - | chr7.4:53255632-53255651 | MS.gene043742:intron | 40.0% | |
| TAGACTTGAGTGATCGAACA+TGG | - | chr7.4:53253534-53253553 | MS.gene043742:CDS | 40.0% | |
| TAGAGTTGTACATCCGCATA+TGG | - | chr7.4:53254158-53254177 | MS.gene043742:intron | 40.0% | |
| TAGATCAGTAATGGTACGTG+TGG | - | chr7.4:53253304-53253323 | MS.gene043742:CDS | 40.0% | |
| TATAGCAGAAGCGACTTTCT+CGG | + | chr7.4:53256640-53256659 | None:intergenic | 40.0% | |
| TATGGTGCAAAGAAGATGGA+AGG | - | chr7.4:53254818-53254837 | MS.gene043742:intron | 40.0% | |
| TCAGATGCTCCACTTAACAT+TGG | + | chr7.4:53254113-53254132 | None:intergenic | 40.0% | |
| TGAAGAAGCCAAGTACATAG+TGG | - | chr7.4:53252050-53252069 | MS.gene043742:CDS | 40.0% | |
| TGCATCTCCATAATTTACGG+TGG | + | chr7.4:53254896-53254915 | None:intergenic | 40.0% | |
| TGTATAGAACTTTCTCCGCT+GGG | + | chr7.4:53254683-53254702 | None:intergenic | 40.0% | |
| TGTCCATATCCATGCTTCAT+AGG | + | chr7.4:53252531-53252550 | None:intergenic | 40.0% | |
| TTAGCTGCCACCGTAAATTA+TGG | - | chr7.4:53254886-53254905 | MS.gene043742:intron | 40.0% | |
| TTCCATCTTCTTTGCACCAT+AGG | + | chr7.4:53254819-53254838 | None:intergenic | 40.0% | |
| TTCCCTTTCTCAAGCACAAT+CGG | + | chr7.4:53252093-53252112 | None:intergenic | 40.0% | |
| TTGTTCATTGGGGTAGAAGT+TGG | - | chr7.4:53254752-53254771 | MS.gene043742:intron | 40.0% | |
| ! | AATTTTCCCTTCTCCACATG+CGG | - | chr7.4:53254623-53254642 | MS.gene043742:intron | 40.0% |
| ! | AGAAACACACTTGTACTGAC+GGG | - | chr7.4:53255413-53255432 | MS.gene043742:intron | 40.0% |
| ! | AGGTAGTGAAGTAGGTGTTT+TGG | - | chr7.4:53254500-53254519 | MS.gene043742:intron | 40.0% |
| ! | GCTTTTAGCAATTGCTTCCA+TGG | - | chr7.4:53255460-53255479 | MS.gene043742:intron | 40.0% |
| ! | TGGCAAGTGTCATTATATCG+GGG | + | chr7.4:53256575-53256594 | None:intergenic | 40.0% |
| ! | TGTAATTTGCACTATGCTCG+GGG | + | chr7.4:53253762-53253781 | None:intergenic | 40.0% |
| ! | TGTTGTTTGCAGAAATGTGG+TGG | + | chr7.4:53251849-53251868 | None:intergenic | 40.0% |
| ! | TTGGTCATGGTGATGATGAT+TGG | - | chr7.4:53252184-53252203 | MS.gene043742:CDS | 40.0% |
| !! | ACATAGTGGGTACTTATGCA+AGG | - | chr7.4:53252064-53252083 | MS.gene043742:CDS | 40.0% |
| !! | CATAGTGGGTACTTATGCAA+GGG | - | chr7.4:53252065-53252084 | MS.gene043742:CDS | 40.0% |
| !! | CGGACTGATTTGTTTCATGA+AGG | - | chr7.4:53254396-53254415 | MS.gene043742:intron | 40.0% |
| !! | GAAATGGGTGAGTTTGTTGT+TGG | + | chr7.4:53251881-53251900 | None:intergenic | 40.0% |
| !! | TCGAACATGGTTCTAACTGT+TGG | - | chr7.4:53253547-53253566 | MS.gene043742:CDS | 40.0% |
| AAAGCTAAAAACTCCGTGGC+TGG | + | chr7.4:53255445-53255464 | None:intergenic | 45.0% | |
| ACAGCTGTTGTTGATCAAGC+TGG | - | chr7.4:53252210-53252229 | MS.gene043742:CDS | 45.0% | |
| ACCAAACGCAATTGTAGAGG+AGG | - | chr7.4:53251996-53252015 | MS.gene043742:CDS | 45.0% | |
| AGAACCTATCCAAGGAGAAG+GGG | - | chr7.4:53255633-53255652 | MS.gene043742:intron | 45.0% | |
| AGCACCAAACGCAATTGTAG+AGG | - | chr7.4:53251993-53252012 | MS.gene043742:CDS | 45.0% | |
| AGGATTTCTTTGGGCTCATG+AGG | - | chr7.4:53256536-53256555 | MS.gene043742:intron | 45.0% | |
| AGTGTCTACAAACGATGTCG+CGG | + | chr7.4:53256880-53256899 | None:intergenic | 45.0% | |
| CAGCTGTTGTTGATCAAGCT+GGG | - | chr7.4:53252211-53252230 | MS.gene043742:CDS | 45.0% | |
| CCAGGCATAACAGGTTCAAA+AGG | + | chr7.4:53255535-53255554 | None:intergenic | 45.0% | |
| CGCTGTAGAGTTAATTCAGC+AGG | - | chr7.4:53255588-53255607 | MS.gene043742:intron | 45.0% | |
| GACCTATGGTGCAAAGAAGA+TGG | - | chr7.4:53254814-53254833 | MS.gene043742:intron | 45.0% | |
| GACTGGTAACCTATGAAGCA+TGG | - | chr7.4:53252519-53252538 | MS.gene043742:intron | 45.0% | |
| GATCGAGGGTAGTGAAGAAT+TGG | + | chr7.4:53251934-53251953 | None:intergenic | 45.0% | |
| GATGCTGTTAAAAGAGAGCC+AGG | - | chr7.4:53253827-53253846 | MS.gene043742:intron | 45.0% | |
| GCTGTTAATGCACTTGGTCA+TGG | - | chr7.4:53252171-53252190 | MS.gene043742:CDS | 45.0% | |
| GGACGTTTAATATGAGGTGG+AGG | - | chr7.4:53256373-53256392 | MS.gene043742:intron | 45.0% | |
| GGAGTGACCTTTGTAGAGTA+TGG | - | chr7.4:53255553-53255572 | MS.gene043742:intron | 45.0% | |
| GTAGAACCTATCCAAGGAGA+AGG | - | chr7.4:53255631-53255650 | MS.gene043742:intron | 45.0% | |
| GTATAGAACTTTCTCCGCTG+GGG | + | chr7.4:53254682-53254701 | None:intergenic | 45.0% | |
| TACTCTACAAAGGTCACTCC+AGG | + | chr7.4:53255553-53255572 | None:intergenic | 45.0% | |
| TACTGGCATACGAGTACAAC+CGG | + | chr7.4:53255766-53255785 | None:intergenic | 45.0% | |
| TCAAATTGAGATGACCCCAG+CGG | - | chr7.4:53254665-53254684 | MS.gene043742:intron | 45.0% | |
| TCAGTAATGGTACGTGTGGT+TGG | - | chr7.4:53253308-53253327 | MS.gene043742:CDS | 45.0% | |
| TCCTCCTCTACAATTGCGTT+TGG | + | chr7.4:53252000-53252019 | None:intergenic | 45.0% | |
| TCGAGGGTAGTGAAGAATTG+GGG | + | chr7.4:53251932-53251951 | None:intergenic | 45.0% | |
| TGTATATTCCCCCTTCTCCT+TGG | + | chr7.4:53255645-53255664 | None:intergenic | 45.0% | |
| ! | ACACCAGATGCTGACTAAAG+AGG | + | chr7.4:53253354-53253373 | None:intergenic | 45.0% |
| ! | ATGCTACTGGCTATGAAGCA+CGG | + | chr7.4:53252681-53252700 | None:intergenic | 45.0% |
| ! | CACCGATTGTGCTTGAGAAA+GGG | - | chr7.4:53252088-53252107 | MS.gene043742:CDS | 45.0% |
| ! | CCTTTTGAACCTGTTATGCC+TGG | - | chr7.4:53255532-53255551 | MS.gene043742:intron | 45.0% |
| ! | GAGACATGGTTTGCCATATG+CGG | + | chr7.4:53254174-53254193 | None:intergenic | 45.0% |
| ! | GAGCATCTGAGATTCATTGC+AGG | - | chr7.4:53254123-53254142 | MS.gene043742:intron | 45.0% |
| ! | GGGATTGCTGTTAATGCACT+TGG | - | chr7.4:53252165-53252184 | MS.gene043742:CDS | 45.0% |
| ! | TCTACTTTAAGGGATGCGGT+TGG | + | chr7.4:53251967-53251986 | None:intergenic | 45.0% |
| !! | CACCTGCAAAAGTACTTCCA+TGG | + | chr7.4:53256674-53256693 | None:intergenic | 45.0% |
| !! | GGAAGGTATTTCGATGTCGA+TGG | - | chr7.4:53254469-53254488 | MS.gene043742:intron | 45.0% |
| !! | GGTGTTGATGCTAATCTGCA+AGG | - | chr7.4:53253369-53253388 | MS.gene043742:CDS | 45.0% |
| !! | TGAGAATGTGATGGGTCATG+TGG | - | chr7.4:53253144-53253163 | MS.gene043742:intron | 45.0% |
| !!! | CATGGAAGTACTTTTGCAGG+TGG | - | chr7.4:53256672-53256691 | MS.gene043742:CDS | 45.0% |
| !!! | GACCATGGAAGTACTTTTGC+AGG | - | chr7.4:53256669-53256688 | MS.gene043742:CDS | 45.0% |
| !!! | GGCCTTTTAGTATTGACAGC+TGG | - | chr7.4:53256912-53256931 | MS.gene043742:CDS | 45.0% |
| AAGCGACTTTCTCGGTTACG+AGG | + | chr7.4:53256632-53256651 | None:intergenic | 50.0% | |
| AAGGTCACTCCAGGCATAAC+AGG | + | chr7.4:53255544-53255563 | None:intergenic | 50.0% | |
| AAGGTTCGGGGTTCAAACCT+CGG | - | chr7.4:53252440-53252459 | MS.gene043742:intron | 50.0% | |
| ACACTTGCCAAACCTCTTGC+TGG | - | chr7.4:53256585-53256604 | MS.gene043742:intron | 50.0% | |
| ATTCCCCCTTCTCCTTGGAT+AGG | + | chr7.4:53255640-53255659 | None:intergenic | 50.0% | |
| ATTCTAGTGGGGAGTGGTGT+AGG | - | chr7.4:53253079-53253098 | MS.gene043742:intron | 50.0% | |
| CATCCGTGTGAACAGAGACA+TGG | + | chr7.4:53254188-53254207 | None:intergenic | 50.0% | |
| CCAAAGCAGGCATACAACCA+AGG | - | chr7.4:53255853-53255872 | MS.gene043742:intron | 50.0% | |
| CCTTGGTTGTATGCCTGCTT+TGG | + | chr7.4:53255856-53255875 | None:intergenic | 50.0% | |
| CGACACGTGAAAGAGATTCG+CGG | - | chr7.4:53256819-53256838 | MS.gene043742:CDS | 50.0% | |
| CTCACAATTCTAGTGGGGAG+TGG | - | chr7.4:53253073-53253092 | MS.gene043742:intron | 50.0% | |
| GAAAGAGAGGAAAGGGAGAG+TGG | - | chr7.4:53253176-53253195 | MS.gene043742:CDS | 50.0% | |
| GAACCTATCCAAGGAGAAGG+GGG | - | chr7.4:53255634-53255653 | MS.gene043742:intron | 50.0% | |
| GACTTTCTCGGTTACGAGGA+CGG | + | chr7.4:53256628-53256647 | None:intergenic | 50.0% | |
| GCATGGATATGGACACCACA+CGG | - | chr7.4:53252536-53252555 | MS.gene043742:intron | 50.0% | |
| GTAGACACTTGCCGAGATTC+TGG | - | chr7.4:53256891-53256910 | MS.gene043742:CDS | 50.0% | |
| GTGAAAGAGATTCGCGGTGT+GGG | - | chr7.4:53256825-53256844 | MS.gene043742:CDS | 50.0% | |
| GTGAGCTTAGCTCAGTTGGA+GGG | - | chr7.4:53252399-53252418 | MS.gene043742:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr7.4:53252670-53252689 | None:intergenic | 50.0% | |
| TGAAAGAGATTCGCGGTGTG+GGG | - | chr7.4:53256826-53256845 | MS.gene043742:CDS | 50.0% | |
| TGTCAAAGCAAGTGCACCCA+GGG | + | chr7.4:53255491-53255510 | None:intergenic | 50.0% | |
| TTGTCAAAGCAAGTGCACCC+AGG | + | chr7.4:53255492-53255511 | None:intergenic | 50.0% | |
| ! | ACTTTAAGGGATGCGGTTGG+TGG | + | chr7.4:53251964-53251983 | None:intergenic | 50.0% |
| ! | CTTTAAGGGATGCGGTTGGT+GGG | + | chr7.4:53251963-53251982 | None:intergenic | 50.0% |
| ! | CTTTGGGCTCATGAGGCTTT+TGG | - | chr7.4:53256543-53256562 | MS.gene043742:intron | 50.0% |
| ! | GCTTTTCCGCATGTGGAGAA+GGG | + | chr7.4:53254632-53254651 | None:intergenic | 50.0% |
| ! | TGCTTTTCCGCATGTGGAGA+AGG | + | chr7.4:53254633-53254652 | None:intergenic | 50.0% |
| !! | GCACCGATTGTGCTTGAGAA+AGG | - | chr7.4:53252087-53252106 | MS.gene043742:CDS | 50.0% |
| ATAGGTAGGCCTCCAGCAAG+AGG | + | chr7.4:53256600-53256619 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr7.4:53252398-53252417 | None:intergenic | 55.0% | |
| CCTCGGCCCACCAGAAAAAA+AGG | - | chr7.4:53252457-53252476 | MS.gene043742:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr7.4:53252395-53252414 | MS.gene043742:intron | 55.0% | |
| CGCGGTGTGGGGCTAATTAT+AGG | - | chr7.4:53256837-53256856 | MS.gene043742:CDS | 55.0% | |
| CGTGAAAGAGATTCGCGGTG+TGG | - | chr7.4:53256824-53256843 | MS.gene043742:CDS | 55.0% | |
| CGTGAGCTTAGCTCAGTTGG+AGG | - | chr7.4:53252398-53252417 | MS.gene043742:intron | 55.0% | |
| CTTGCCAAACCTCTTGCTGG+AGG | - | chr7.4:53256588-53256607 | MS.gene043742:intron | 55.0% | |
| CTTGCTGGAGGCCTACCTAT+TGG | - | chr7.4:53256600-53256619 | MS.gene043742:intron | 55.0% | |
| GACTAGGCGTGTCTCGTTGT+CGG | + | chr7.4:53252648-53252667 | None:intergenic | 55.0% | |
| GTTACGAGGACGGCTCCAAT+AGG | + | chr7.4:53256618-53256637 | None:intergenic | 55.0% | |
| TAGGCCTCCAGCAAGAGGTT+TGG | + | chr7.4:53256595-53256614 | None:intergenic | 55.0% | |
| TGACGGGAAAGTTCCAGCCA+CGG | - | chr7.4:53255429-53255448 | MS.gene043742:intron | 55.0% | |
| TGCTTCCATGGGAGAACCCT+GGG | - | chr7.4:53255472-53255491 | MS.gene043742:intron | 55.0% | |
| TTGCTTCCATGGGAGAACCC+TGG | - | chr7.4:53255471-53255490 | MS.gene043742:intron | 55.0% | |
| TTGGTGGGAGCAGTGATCGA+GGG | + | chr7.4:53251948-53251967 | None:intergenic | 55.0% | |
| !! | GGTGTCTGCTTTTCCGCATG+TGG | + | chr7.4:53254639-53254658 | None:intergenic | 55.0% |
| !!! | CCTTTTTTTCTGGTGGGCCG+AGG | + | chr7.4:53252460-53252479 | None:intergenic | 55.0% |
| AACGAGACACGCCTAGTCCG+AGG | - | chr7.4:53252650-53252669 | MS.gene043742:intron | 60.0% | |
| CGAGGACGGCTCCAATAGGT+AGG | + | chr7.4:53256614-53256633 | None:intergenic | 60.0% | |
| GTCGCGTGTTAGTGTCCGTG+TGG | + | chr7.4:53252554-53252573 | None:intergenic | 60.0% | |
| ! | GTTGGTGGGAGCAGTGATCG+AGG | + | chr7.4:53251949-53251968 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGACT+AGG | + | chr7.4:53252664-53252683 | None:intergenic | 65.0% | |
| GTGCACCCAGGGTTCTCCCA+TGG | + | chr7.4:53255480-53255499 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 53251838 | 53257046 | 53251838 | ID=MS.gene043742 |
| chr7.4 | mRNA | 53251838 | 53257046 | 53251838 | ID=MS.gene043742.t1;Parent=MS.gene043742 |
| chr7.4 | exon | 53256609 | 53257046 | 53256609 | ID=MS.gene043742.t1.exon1;Parent=MS.gene043742.t1 |
| chr7.4 | CDS | 53256609 | 53257046 | 53256609 | ID=cds.MS.gene043742.t1;Parent=MS.gene043742.t1 |
| chr7.4 | exon | 53253146 | 53253580 | 53253146 | ID=MS.gene043742.t1.exon2;Parent=MS.gene043742.t1 |
| chr7.4 | CDS | 53253146 | 53253580 | 53253146 | ID=cds.MS.gene043742.t1;Parent=MS.gene043742.t1 |
| chr7.4 | exon | 53251838 | 53252371 | 53251838 | ID=MS.gene043742.t1.exon3;Parent=MS.gene043742.t1 |
| chr7.4 | CDS | 53251838 | 53252371 | 53251838 | ID=cds.MS.gene043742.t1;Parent=MS.gene043742.t1 |
| Gene Sequence |
| Protein sequence |
