Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26019.t1 | XP_013448465.1 | 95.1 | 472 | 15 | 2 | 1 | 466 | 1 | 470 | 4.60E-254 | 886.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26019.t1 | Q9M8M7 | 73.6 | 420 | 109 | 1 | 44 | 463 | 40 | 457 | 2.4e-179 | 629.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26019.t1 | A0A072TYI8 | 95.1 | 472 | 15 | 2 | 1 | 466 | 1 | 470 | 3.3e-254 | 886.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26019.t1 | MTR_7g451450 | 95.551 | 472 | 13 | 2 | 1 | 466 | 1 | 470 | 0.0 | 919 |
| MS.gene26019.t1 | MTR_3g465800 | 31.935 | 429 | 244 | 12 | 66 | 459 | 55 | 470 | 1.26e-58 | 200 |
| MS.gene26019.t1 | MTR_3g465800 | 32.195 | 410 | 233 | 11 | 82 | 459 | 3 | 399 | 1.84e-56 | 192 |
| MS.gene26019.t1 | MTR_7g072420 | 30.414 | 411 | 245 | 10 | 79 | 459 | 79 | 478 | 3.10e-50 | 178 |
| MS.gene26019.t1 | MTR_8g091660 | 30.318 | 409 | 248 | 11 | 79 | 459 | 79 | 478 | 1.08e-46 | 168 |
| MS.gene26019.t1 | MTR_4g076100 | 28.706 | 425 | 250 | 13 | 83 | 460 | 81 | 499 | 2.16e-40 | 152 |
| MS.gene26019.t1 | MTR_3g118070 | 35.117 | 299 | 167 | 10 | 83 | 367 | 19 | 304 | 3.31e-35 | 135 |
| MS.gene26019.t1 | MTR_3g118070 | 35.117 | 299 | 167 | 10 | 83 | 367 | 76 | 361 | 5.85e-35 | 136 |
| MS.gene26019.t1 | MTR_4g076100 | 28.532 | 361 | 207 | 12 | 145 | 460 | 1 | 355 | 9.59e-30 | 119 |
| MS.gene26019.t1 | MTR_8g007510 | 63.158 | 57 | 20 | 1 | 48 | 104 | 54 | 109 | 4.67e-16 | 74.3 |
| MS.gene26019.t1 | MTR_4g128620 | 24.289 | 387 | 199 | 15 | 141 | 438 | 416 | 797 | 1.51e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26019.t1 | AT1G80600 | 73.571 | 420 | 109 | 1 | 44 | 463 | 40 | 457 | 0.0 | 647 |
| MS.gene26019.t1 | AT5G46180 | 29.902 | 408 | 270 | 7 | 66 | 461 | 42 | 445 | 1.50e-51 | 181 |
| MS.gene26019.t1 | AT4G39660 | 28.541 | 466 | 273 | 8 | 28 | 462 | 40 | 476 | 1.72e-51 | 181 |
| MS.gene26019.t1 | AT2G38400 | 30.176 | 454 | 267 | 13 | 37 | 459 | 40 | 474 | 2.22e-49 | 176 |
| MS.gene26019.t1 | AT4G39660 | 30.025 | 403 | 245 | 6 | 88 | 462 | 8 | 401 | 1.18e-48 | 172 |
| MS.gene26019.t1 | AT2G38400 | 30.995 | 442 | 255 | 13 | 37 | 447 | 40 | 462 | 1.76e-48 | 174 |
| MS.gene26019.t1 | AT3G08860 | 29.302 | 430 | 258 | 13 | 64 | 459 | 61 | 478 | 1.47e-47 | 171 |
| MS.gene26019.t1 | AT3G08860 | 30.120 | 415 | 244 | 13 | 64 | 444 | 61 | 463 | 2.06e-45 | 165 |
| MS.gene26019.t1 | AT3G22200 | 28.271 | 428 | 247 | 13 | 83 | 459 | 70 | 488 | 1.18e-39 | 149 |
| MS.gene26019.t1 | AT3G22200 | 28.271 | 428 | 247 | 13 | 83 | 459 | 79 | 497 | 1.62e-39 | 149 |
| MS.gene26019.t1 | AT3G48730 | 31.153 | 321 | 171 | 12 | 83 | 376 | 80 | 377 | 3.26e-34 | 134 |
| MS.gene26019.t1 | AT5G63570 | 30.519 | 308 | 167 | 10 | 83 | 366 | 19 | 303 | 2.50e-31 | 125 |
| MS.gene26019.t1 | AT5G63570 | 30.519 | 308 | 167 | 10 | 83 | 366 | 82 | 366 | 4.67e-31 | 125 |
| MS.gene26019.t1 | AT5G57590 | 23.820 | 445 | 239 | 18 | 89 | 438 | 367 | 806 | 1.56e-14 | 76.6 |
Find 116 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACTACTAAAACAGAAAT+TGG | 0.176104 | 7.3:-54028523 | MS.gene26019:CDS |
| CTTTGGGCTCATGAGGCTTT+TGG | 0.195818 | 7.3:-54028768 | MS.gene26019:CDS |
| CGCGGTGTGGGGTTAATTAT+AGG | 0.232489 | 7.3:-54028474 | MS.gene26019:CDS |
| GTCGCTTCTGCTATAAATTA+TGG | 0.257939 | 7.3:-54028666 | MS.gene26019:CDS |
| TTGGCAAGTGTCATTATATC+AGG | 0.261427 | 7.3:+54028738 | None:intergenic |
| TAGGTAGATCAGGATATCTT+TGG | 0.280097 | 7.3:-54028785 | MS.gene26019:CDS |
| CATCTAAAACATGCAAAGTT+TGG | 0.287499 | 7.3:+54028298 | None:intergenic |
| TGTTGAAGGGAATGAGTATT+TGG | 0.291665 | 7.3:-54032896 | MS.gene26019:CDS |
| GTTAATTATAGGAATTGATT+TGG | 0.299314 | 7.3:-54028463 | MS.gene26019:CDS |
| CGAAATGCTTGTGATGAAAC+TGG | 0.307803 | 7.3:-54029592 | MS.gene26019:CDS |
| TGCTGTTGTTGTTGTTGAAA+TGG | 0.308533 | 7.3:+54033127 | None:intergenic |
| CGCTGTAGAGTTAATTCAAC+AGG | 0.310557 | 7.3:-54029698 | MS.gene26019:CDS |
| ATGTAGGTTCAATGTGGTTT+AGG | 0.334515 | 7.3:-54028804 | MS.gene26019:intron |
| GATCGAGGGTAGTGAAGAAT+TGG | 0.360773 | 7.3:+54033093 | None:intergenic |
| CTGGAAAAGGTAATGTTGTT+AGG | 0.365988 | 7.3:-54028380 | MS.gene26019:CDS |
| GCTGTTGTTGTTGTTGAAAT+GGG | 0.382497 | 7.3:+54033128 | None:intergenic |
| AGGTAGATCAGGATATCTTT+GGG | 0.394306 | 7.3:-54028784 | MS.gene26019:CDS |
| ATCGAGGGTAGTGAAGAATT+GGG | 0.396352 | 7.3:+54033094 | None:intergenic |
| ACACTTGCCAAACCTCTTGC+TGG | 0.401411 | 7.3:-54028726 | MS.gene26019:CDS |
| GGAGTAACCTTCTTAGAGTA+TGG | 0.401860 | 7.3:-54029733 | MS.gene26019:CDS |
| TTCCAGCTGTCAATACTAGA+AGG | 0.404872 | 7.3:+54028397 | None:intergenic |
| CTGTCTTCTACAATTGCGTT+TGG | 0.405169 | 7.3:+54033027 | None:intergenic |
| TATAGCAGAAGCGACTTTCT+CGG | 0.409460 | 7.3:+54028674 | None:intergenic |
| ACCATTGATTATAACAGAAC+AGG | 0.410210 | 7.3:-54028349 | MS.gene26019:CDS |
| TTCCCTTTCTCAAGCACAAT+CGG | 0.410612 | 7.3:+54032937 | None:intergenic |
| GCCTTTAGCAATTGCTTCCA+TGG | 0.416682 | 7.3:-54029826 | MS.gene26019:CDS |
| CTTGCTGGAGGCCTACCTAT+TGG | 0.419628 | 7.3:-54028711 | MS.gene26019:CDS |
| AAGGTTACTCCAGGCATAAC+AGG | 0.422920 | 7.3:+54029745 | None:intergenic |
| CTATCTGATGTATCAAAGAA+AGG | 0.423170 | 7.3:-54028558 | MS.gene26019:CDS |
| ATACTAGAAGGCCAGACTTT+CGG | 0.425807 | 7.3:+54028409 | None:intergenic |
| GATACATCAGATAGGAAAGT+AGG | 0.426197 | 7.3:+54028567 | None:intergenic |
| TCCTGTTCTGTTATAATCAA+TGG | 0.426804 | 7.3:+54028348 | None:intergenic |
| GTGCTCCAACATCTACTTTG+AGG | 0.429968 | 7.3:+54033049 | None:intergenic |
| CAATGTGGTTTAGGTAGATC+AGG | 0.430129 | 7.3:-54028795 | MS.gene26019:CDS |
| GTAGACGCTTGCCGAAAGTC+TGG | 0.430990 | 7.3:-54028420 | MS.gene26019:CDS |
| GTTACGAGGACGGCTCCAAT+AGG | 0.437400 | 7.3:+54028696 | None:intergenic |
| CTTTCTTTGATACATCAGAT+AGG | 0.446280 | 7.3:+54028559 | None:intergenic |
| ATAAGTACCCACTATGTACT+TGG | 0.457777 | 7.3:+54032969 | None:intergenic |
| AGACTGTAGAAATTCTTTAG+TGG | 0.459904 | 7.3:+54029618 | None:intergenic |
| TTGGTCATGGTGATGATGAT+TGG | 0.462669 | 7.3:-54032843 | MS.gene26019:CDS |
| TGCTTCCATGGGAGAACCCT+GGG | 0.463427 | 7.3:-54029814 | MS.gene26019:CDS |
| GAAATGGGTGAGTTTGTTGT+TGG | 0.468980 | 7.3:+54033143 | None:intergenic |
| TGCTCCAACATCTACTTTGA+GGG | 0.471945 | 7.3:+54033050 | None:intergenic |
| GCACCGATTGTGCTTGAGAA+AGG | 0.472175 | 7.3:-54032940 | MS.gene26019:CDS |
| AAAGCTGTTGTTGATCAAGC+TGG | 0.473890 | 7.3:-54032817 | MS.gene26019:CDS |
| GGATGTGTCAGCAACACCTT+TGG | 0.474925 | 7.3:-54028442 | MS.gene26019:CDS |
| CTAGTATTGACAGCTGGAAA+AGG | 0.479829 | 7.3:-54028393 | MS.gene26019:CDS |
| TAGGCCTCCAGCAAGAGGTT+TGG | 0.481587 | 7.3:+54028719 | None:intergenic |
| GAACTACTAAAACAGAAATT+GGG | 0.486287 | 7.3:-54028522 | MS.gene26019:CDS |
| ACTTTGAGGGATGCGGTTGG+TGG | 0.486977 | 7.3:+54033063 | None:intergenic |
| ATGAAAGAGATTCGCGGTGT+GGG | 0.487265 | 7.3:-54028486 | MS.gene26019:CDS |
| TGCATTTCCATACTCTAAGA+AGG | 0.490626 | 7.3:+54029726 | None:intergenic |
| AGAGCAGCATTACAAATAAG+AGG | 0.492972 | 7.3:+54028615 | None:intergenic |
| CCTTTAGCAATTGCTTCCAT+GGG | 0.503053 | 7.3:-54029825 | MS.gene26019:CDS |
| AACATCTACTTTGAGGGATG+CGG | 0.511612 | 7.3:+54033056 | None:intergenic |
| TATCTATCACTCTCTTCCTC+AGG | 0.513462 | 7.3:-54032773 | MS.gene26019:intron |
| TCGTCAAAGCAAGTGCGCCC+AGG | 0.517270 | 7.3:+54029797 | None:intergenic |
| CGTCAAAGCAAGTGCGCCCA+GGG | 0.521246 | 7.3:+54029798 | None:intergenic |
| GGGATTGCTGTTAATGCACT+TGG | 0.523563 | 7.3:-54032862 | MS.gene26019:CDS |
| CACCGATTGTGCTTGAGAAA+GGG | 0.524263 | 7.3:-54032939 | MS.gene26019:CDS |
| TGTTGTTTGCAGAAATGTGG+TGG | 0.527430 | 7.3:+54033175 | None:intergenic |
| CCAGGCATAACAGGTTCAAA+AGG | 0.527602 | 7.3:+54029754 | None:intergenic |
| CCCATGGAAGCAATTGCTAA+AGG | 0.527904 | 7.3:+54029825 | None:intergenic |
| GGCCTTCTAGTATTGACAGC+TGG | 0.534966 | 7.3:-54028399 | MS.gene26019:CDS |
| GAGTATTTGGATTGTAGTGG+TGG | 0.536009 | 7.3:-54032883 | MS.gene26019:CDS |
| CAGTGTGAAGAAGACTAAAG+AGG | 0.536780 | 7.3:-54033007 | MS.gene26019:CDS |
| GTGGAACCTATCCAAGGAGA+AGG | 0.537961 | 7.3:-54029655 | MS.gene26019:CDS |
| GCTGTTAATGCACTTGGTCA+TGG | 0.540120 | 7.3:-54032856 | MS.gene26019:CDS |
| TGTAAAGTGTATGATGTTGA+AGG | 0.545867 | 7.3:-54032910 | MS.gene26019:CDS |
| CTTTGAGGGATGCGGTTGGT+GGG | 0.546225 | 7.3:+54033064 | None:intergenic |
| GTGCGCCCAGGGTTCTCCCA+TGG | 0.549729 | 7.3:+54029809 | None:intergenic |
| TACTCTAAGAAGGTTACTCC+AGG | 0.552267 | 7.3:+54029736 | None:intergenic |
| GGCACTTCTTGTGTTTGATG+AGG | 0.553270 | 7.3:-54029569 | MS.gene26019:intron |
| GCTATAAATTATGGCGACCA+TGG | 0.553462 | 7.3:-54028657 | MS.gene26019:CDS |
| TGAATTAACTCTACAGCGGC+CGG | 0.554420 | 7.3:+54029703 | None:intergenic |
| CAGAAACACACTTGTACTGA+CGG | 0.555597 | 7.3:-54029874 | MS.gene26019:CDS |
| TGGAACCTATCCAAGGAGAA+GGG | 0.557559 | 7.3:-54029654 | MS.gene26019:CDS |
| AGGATATCTTTGGGCTCATG+AGG | 0.562479 | 7.3:-54028775 | MS.gene26019:CDS |
| GAAATGCTTGTGATGAAACT+GGG | 0.564923 | 7.3:-54029591 | MS.gene26019:CDS |
| TTGTGTTGTTTGCAGAAATG+TGG | 0.566796 | 7.3:+54033172 | None:intergenic |
| GCATCCCTCAAAGTAGATGT+TGG | 0.569300 | 7.3:-54033054 | MS.gene26019:CDS |
| TGAAGAAGCCAAGTACATAG+TGG | 0.571534 | 7.3:-54032977 | MS.gene26019:CDS |
| AAGCTGTTGTTGATCAAGCT+GGG | 0.574364 | 7.3:-54032816 | MS.gene26019:CDS |
| TTGCTTCCATGGGAGAACCC+TGG | 0.575175 | 7.3:-54029815 | MS.gene26019:CDS |
| GACTTTCTCGGTTACGAGGA+CGG | 0.580932 | 7.3:+54028686 | None:intergenic |
| GTTGGTGGGAGCAGTGATCG+AGG | 0.582595 | 7.3:+54033078 | None:intergenic |
| ACATAGTGGGTACTTATGCA+AGG | 0.583360 | 7.3:-54032963 | MS.gene26019:CDS |
| AGAAACACACTTGTACTGAC+GGG | 0.584743 | 7.3:-54029873 | MS.gene26019:CDS |
| AATGAGTATTTGGATTGTAG+TGG | 0.589682 | 7.3:-54032886 | MS.gene26019:CDS |
| TCGAGGGTAGTGAAGAATTG+GGG | 0.590529 | 7.3:+54033095 | None:intergenic |
| CACCTGCAAAAGTACTTCCA+TGG | 0.596537 | 7.3:+54028640 | None:intergenic |
| TGGCAAGTGTCATTATATCA+GGG | 0.597998 | 7.3:+54028739 | None:intergenic |
| AAGCGACTTTCTCGGTTACG+AGG | 0.599730 | 7.3:+54028682 | None:intergenic |
| ATTGTGCTTGAGAAAGGGAA+AGG | 0.601270 | 7.3:-54032934 | MS.gene26019:CDS |
| CGACACATGAAAGAGATTCG+CGG | 0.602218 | 7.3:-54028492 | MS.gene26019:CDS |
| GTTGTTTGCAGAAATGTGGT+GGG | 0.608903 | 7.3:+54033176 | None:intergenic |
| CATGAAAGAGATTCGCGGTG+TGG | 0.610302 | 7.3:-54028487 | MS.gene26019:CDS |
| TGAAAGAGATTCGCGGTGTG+GGG | 0.616072 | 7.3:-54028485 | MS.gene26019:CDS |
| ATAGGTAGGCCTCCAGCAAG+AGG | 0.618364 | 7.3:+54028714 | None:intergenic |
| GAAGAAGCCAAGTACATAGT+GGG | 0.622654 | 7.3:-54032976 | MS.gene26019:CDS |
| TGTTCTGTTATAATCAATGG+TGG | 0.622795 | 7.3:+54028351 | None:intergenic |
| TTTCGGCAAGCGTCTACCAA+AGG | 0.622863 | 7.3:+54028426 | None:intergenic |
| CTTAGAGTATGGAAATGCAC+CGG | 0.624735 | 7.3:-54029722 | MS.gene26019:CDS |
| TTGGTGGGAGCAGTGATCGA+GGG | 0.633959 | 7.3:+54033079 | None:intergenic |
| GTAAAGTGTATGATGTTGAA+GGG | 0.636015 | 7.3:-54032909 | MS.gene26019:CDS |
| CGAGGACGGCTCCAATAGGT+AGG | 0.637097 | 7.3:+54028700 | None:intergenic |
| TCTACTTTGAGGGATGCGGT+TGG | 0.638596 | 7.3:+54033060 | None:intergenic |
| GGAACCTATCCAAGGAGAAG+GGG | 0.639140 | 7.3:-54029653 | MS.gene26019:CDS |
| CATAGTGGGTACTTATGCAA+GGG | 0.639478 | 7.3:-54032962 | MS.gene26019:CDS |
| ATGATTATGTAGGTTCAATG+TGG | 0.641510 | 7.3:-54028810 | MS.gene26019:intron |
| AGTATTTGGATTGTAGTGGT+GGG | 0.647378 | 7.3:-54032882 | MS.gene26019:CDS |
| GAACCTATCCAAGGAGAAGG+GGG | 0.649216 | 7.3:-54029652 | MS.gene26019:CDS |
| CTTGCCAAACCTCTTGCTGG+AGG | 0.671134 | 7.3:-54028723 | MS.gene26019:CDS |
| CTGTTGAATTAACTCTACAG+CGG | 0.705865 | 7.3:+54029699 | None:intergenic |
| GCTGTAGAGTTAATTCAACA+GGG | 0.738371 | 7.3:-54029697 | MS.gene26019:CDS |
| AAATGCTTGTGATGAAACTG+GGG | 0.743554 | 7.3:-54029590 | MS.gene26019:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTGTTTAGAAATTTT+AGG | - | chr7.3:54031190-54031209 | MS.gene26019:intron | 10.0% |
| !!! | AGTTTTTTTTATAATTTTTC+AGG | - | chr7.3:54028737-54028756 | MS.gene26019:CDS | 10.0% |
| !!! | GTTTTTTTTATAATTTTTCA+GGG | - | chr7.3:54028738-54028757 | MS.gene26019:CDS | 10.0% |
| !! | AAATGTAATTAAAGTTTCAT+TGG | + | chr7.3:54032353-54032372 | None:intergenic | 15.0% |
| !! | AGTTGTTTATTGTAAATAAT+TGG | - | chr7.3:54029318-54029337 | MS.gene26019:intron | 15.0% |
| !! | ATATTTACAATTGTTTCATT+TGG | - | chr7.3:54032603-54032622 | MS.gene26019:intron | 15.0% |
| !! | ATTTGTTTGAATTAAGATAA+TGG | - | chr7.3:54029255-54029274 | MS.gene26019:intron | 15.0% |
| !! | GCTAAATATTTAATTAACTT+CGG | + | chr7.3:54030723-54030742 | None:intergenic | 15.0% |
| !! | TAGAAAGAAGTTTAATTATT+GGG | - | chr7.3:54029285-54029304 | MS.gene26019:intron | 15.0% |
| !! | TATGTTATTATTTGATAAAG+CGG | - | chr7.3:54030563-54030582 | MS.gene26019:intron | 15.0% |
| !! | TGAATTGATACAATAAATAA+AGG | + | chr7.3:54032389-54032408 | None:intergenic | 15.0% |
| !! | TTACAAAACTATAACTTATA+TGG | + | chr7.3:54029928-54029947 | None:intergenic | 15.0% |
| !! | TTAGAAAGAAGTTTAATTAT+TGG | - | chr7.3:54029284-54029303 | MS.gene26019:intron | 15.0% |
| !!! | AATAAATAAAGGTATATTAG+TGG | + | chr7.3:54032378-54032397 | None:intergenic | 15.0% |
| !!! | ATAAATAAAGGTATATTAGT+GGG | + | chr7.3:54032377-54032396 | None:intergenic | 15.0% |
| !! | ACAAATTATTGCTTCATAAT+TGG | + | chr7.3:54030040-54030059 | None:intergenic | 20.0% |
| !! | ATAATGCTTTGTATTGAATA+AGG | - | chr7.3:54030788-54030807 | MS.gene26019:intron | 20.0% |
| !! | ATTATTAGACAAAAGCAAAA+AGG | + | chr7.3:54029354-54029373 | None:intergenic | 20.0% |
| !! | CTTAAATGATGCTTAATATA+AGG | - | chr7.3:54032512-54032531 | MS.gene26019:intron | 20.0% |
| !! | CTTATATTAAGCATCATTTA+AGG | + | chr7.3:54032514-54032533 | None:intergenic | 20.0% |
| !! | GTTAATTATAGGAATTGATT+TGG | - | chr7.3:54033007-54033026 | MS.gene26019:CDS | 20.0% |
| !! | TCATTTCTATATGATTATGT+AGG | - | chr7.3:54032650-54032669 | MS.gene26019:intron | 20.0% |
| !! | TCTTTAATAGTAGAAACAAA+GGG | - | chr7.3:54028805-54028824 | MS.gene26019:intron | 20.0% |
| !! | TTTGAGAAAATCACATAATT+CGG | - | chr7.3:54028921-54028940 | MS.gene26019:intron | 20.0% |
| !!! | AATACAAAGCATTATTAGAA+GGG | + | chr7.3:54030783-54030802 | None:intergenic | 20.0% |
| !!! | AGTATTATTTTACTGACTTT+TGG | - | chr7.3:54029642-54029661 | MS.gene26019:CDS | 20.0% |
| !!! | TTAGTTTTTCTTCCAATAAA+TGG | + | chr7.3:54031290-54031309 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAGAAATTTTAGG+TGG | - | chr7.3:54031193-54031212 | MS.gene26019:intron | 20.0% |
| ! | AAAAACTAAAGTGTGGAAAA+AGG | - | chr7.3:54031301-54031320 | MS.gene26019:intron | 25.0% |
| ! | AAATTGTCAGAAAAATAAGG+TGG | - | chr7.3:54031031-54031050 | MS.gene26019:intron | 25.0% |
| ! | AACACACTTCAAAATTATGT+AGG | + | chr7.3:54032572-54032591 | None:intergenic | 25.0% |
| ! | AAGCATATAAAAGATATGAG+GGG | + | chr7.3:54032250-54032269 | None:intergenic | 25.0% |
| ! | AGAACTACTAAAACAGAAAT+TGG | - | chr7.3:54032947-54032966 | MS.gene26019:CDS | 25.0% |
| ! | ATTTGCAAAAAATACACGAT+CGG | + | chr7.3:54031528-54031547 | None:intergenic | 25.0% |
| ! | CAAGCATATAAAAGATATGA+GGG | + | chr7.3:54032251-54032270 | None:intergenic | 25.0% |
| ! | CATATTATTGTAATTACCTG+AGG | + | chr7.3:54028716-54028735 | None:intergenic | 25.0% |
| ! | CTCTTTGTATTTCCATTTAT+TGG | - | chr7.3:54031275-54031294 | MS.gene26019:intron | 25.0% |
| ! | CTTTAATAGTAGAAACAAAG+GGG | - | chr7.3:54028806-54028825 | MS.gene26019:intron | 25.0% |
| ! | GAACTACTAAAACAGAAATT+GGG | - | chr7.3:54032948-54032967 | MS.gene26019:CDS | 25.0% |
| ! | GTCTTTAATAGTAGAAACAA+AGG | - | chr7.3:54028804-54028823 | MS.gene26019:intron | 25.0% |
| ! | TATAATCTCAAATGAAGATG+CGG | - | chr7.3:54030539-54030558 | MS.gene26019:intron | 25.0% |
| ! | TCAAGCATATAAAAGATATG+AGG | + | chr7.3:54032252-54032271 | None:intergenic | 25.0% |
| ! | TCATAGAAATTAGTACACAA+TGG | - | chr7.3:54032469-54032488 | MS.gene26019:intron | 25.0% |
| ! | TCATTATGATCATTGAAAGA+TGG | - | chr7.3:54030411-54030430 | MS.gene26019:intron | 25.0% |
| ! | TTTAGATACAATTTGTGTTG+TGG | - | chr7.3:54029175-54029194 | MS.gene26019:intron | 25.0% |
| !! | AATGTAATTTGCACTATGTT+CGG | + | chr7.3:54029979-54029998 | None:intergenic | 25.0% |
| !! | AGACATTGAAGCATTTAATA+TGG | - | chr7.3:54030464-54030483 | MS.gene26019:intron | 25.0% |
| !! | ATATAAGGACAGTTGATATT+AGG | - | chr7.3:54032527-54032546 | MS.gene26019:intron | 25.0% |
| !! | ATGAAATTGAAAGCTCTAAT+AGG | - | chr7.3:54031104-54031123 | MS.gene26019:intron | 25.0% |
| !! | ATTTCTTTGAGTTCATATCT+TGG | - | chr7.3:54031389-54031408 | MS.gene26019:intron | 25.0% |
| !! | CAATACAAAGCATTATTAGA+AGG | + | chr7.3:54030784-54030803 | None:intergenic | 25.0% |
| !! | GCGCTTAAATTTTGTTAAAA+AGG | - | chr7.3:54029708-54029727 | MS.gene26019:CDS | 25.0% |
| !! | TAGAAGTTGGTTAATATGTT+GGG | - | chr7.3:54030953-54030972 | MS.gene26019:intron | 25.0% |
| !! | TCACATTTAAAACTTGGAAA+AGG | + | chr7.3:54030155-54030174 | None:intergenic | 25.0% |
| !! | TGATTTTCTCAAATCATTAG+CGG | + | chr7.3:54028914-54028933 | None:intergenic | 25.0% |
| !! | TTACCTTAAAGTCTTTTTGA+AGG | - | chr7.3:54029666-54029685 | MS.gene26019:CDS | 25.0% |
| !!! | GTCTGTGTATAGTTATTTTA+AGG | - | chr7.3:54029528-54029547 | MS.gene26019:intron | 25.0% |
| !!! | TTGTTAAAAAGGCGTTTAAA+AGG | - | chr7.3:54029719-54029738 | MS.gene26019:CDS | 25.0% |
| !!! | TTTCCAAGTTTTAAATGTGA+TGG | - | chr7.3:54030155-54030174 | MS.gene26019:intron | 25.0% |
| AATCAGTGTAAGCAATTATG+GGG | - | chr7.3:54030091-54030110 | MS.gene26019:intron | 30.0% | |
| AATCAGTGTATGCAATTATG+AGG | - | chr7.3:54030180-54030199 | MS.gene26019:intron | 30.0% | |
| AATGAGTATTTGGATTGTAG+TGG | - | chr7.3:54028584-54028603 | MS.gene26019:CDS | 30.0% | |
| ACAATCAGTGTAAGCAATTA+TGG | - | chr7.3:54030089-54030108 | MS.gene26019:intron | 30.0% | |
| ACACCAAGCACTATTAATAA+AGG | - | chr7.3:54032419-54032438 | MS.gene26019:intron | 30.0% | |
| ACTTATCATGCACTTAATAG+TGG | + | chr7.3:54032108-54032127 | None:intergenic | 30.0% | |
| AGACTGTAGAAATTCTTTAG+TGG | + | chr7.3:54031855-54031874 | None:intergenic | 30.0% | |
| ATCATTGAAAGATGGTGATA+CGG | - | chr7.3:54030419-54030438 | MS.gene26019:intron | 30.0% | |
| ATGATTATGTAGGTTCAATG+TGG | - | chr7.3:54032660-54032679 | MS.gene26019:intron | 30.0% | |
| ATTGAATTCTGGATGTCATA+AGG | - | chr7.3:54030625-54030644 | MS.gene26019:intron | 30.0% | |
| CAATCAGTGTAAGCAATTAT+GGG | - | chr7.3:54030090-54030109 | MS.gene26019:intron | 30.0% | |
| CACCAAGCACTATTAATAAA+GGG | - | chr7.3:54032420-54032439 | MS.gene26019:intron | 30.0% | |
| CTAACAACAGCATATACTTA+GGG | + | chr7.3:54030215-54030234 | None:intergenic | 30.0% | |
| CTATCTGATGTATCAAAGAA+AGG | - | chr7.3:54032912-54032931 | MS.gene26019:CDS | 30.0% | |
| CTTATCATGCACTTAATAGT+GGG | + | chr7.3:54032107-54032126 | None:intergenic | 30.0% | |
| CTTTCTTTGATACATCAGAT+AGG | + | chr7.3:54032914-54032933 | None:intergenic | 30.0% | |
| GAAATACAAAGAGTGAAGTA+GGG | + | chr7.3:54031268-54031287 | None:intergenic | 30.0% | |
| GAAATTATCTTCTGTTCTGA+AGG | - | chr7.3:54031143-54031162 | MS.gene26019:intron | 30.0% | |
| GGGAAATTGTCAGAAAAATA+AGG | - | chr7.3:54031028-54031047 | MS.gene26019:intron | 30.0% | |
| GTAAAGTGTATGATGTTGAA+GGG | - | chr7.3:54028561-54028580 | MS.gene26019:CDS | 30.0% | |
| GTCATCTCAATTTGACAAAA+AGG | + | chr7.3:54030848-54030867 | None:intergenic | 30.0% | |
| GTTCCTTCAAAAAGACTTTA+AGG | + | chr7.3:54029672-54029691 | None:intergenic | 30.0% | |
| TAAAGTATAGGTAGTGAAGT+AGG | - | chr7.3:54030679-54030698 | MS.gene26019:intron | 30.0% | |
| TACCCTTTATTAATAGTGCT+TGG | + | chr7.3:54032425-54032444 | None:intergenic | 30.0% | |
| TACTTCTCCATAATTTACAG+TGG | + | chr7.3:54031081-54031100 | None:intergenic | 30.0% | |
| TCCTGTTCTGTTATAATCAA+TGG | + | chr7.3:54033125-54033144 | None:intergenic | 30.0% | |
| TCTAACAACAGCATATACTT+AGG | + | chr7.3:54030216-54030235 | None:intergenic | 30.0% | |
| TGTAAAACTTTAGTAGTGAG+AGG | - | chr7.3:54029943-54029962 | MS.gene26019:CDS | 30.0% | |
| TGTAAAGTGTATGATGTTGA+AGG | - | chr7.3:54028560-54028579 | MS.gene26019:CDS | 30.0% | |
| TGTTCTGTTATAATCAATGG+TGG | + | chr7.3:54033122-54033141 | None:intergenic | 30.0% | |
| TTCAACAGCATCAAATGTAA+TGG | + | chr7.3:54030004-54030023 | None:intergenic | 30.0% | |
| TTGGAAGAAAAACTAAAGTG+TGG | - | chr7.3:54031294-54031313 | MS.gene26019:intron | 30.0% | |
| TTGTTTCATGAAGGTTATTG+AGG | - | chr7.3:54030592-54030611 | MS.gene26019:intron | 30.0% | |
| ! | AAGTGCATGATAAGTTGAAA+TGG | - | chr7.3:54032113-54032132 | MS.gene26019:intron | 30.0% |
| ! | AATTTGTTTAGAACTGATGC+AGG | - | chr7.3:54031466-54031485 | MS.gene26019:intron | 30.0% |
| ! | ACCATTGATTATAACAGAAC+AGG | - | chr7.3:54033121-54033140 | MS.gene26019:CDS | 30.0% |
| ! | CATCTAAAACATGCAAAGTT+TGG | + | chr7.3:54033175-54033194 | None:intergenic | 30.0% |
| ! | GTAGAAGTTGGTTAATATGT+TGG | - | chr7.3:54030952-54030971 | MS.gene26019:intron | 30.0% |
| ! | GTGCTTCATTGTTCTAATTT+TGG | - | chr7.3:54030119-54030138 | MS.gene26019:intron | 30.0% |
| ! | TACATACCTCGATTTTCTAT+CGG | - | chr7.3:54029052-54029071 | MS.gene26019:intron | 30.0% |
| ! | TGCTAGATTCTTTCTGTTTT+TGG | - | chr7.3:54028770-54028789 | MS.gene26019:CDS | 30.0% |
| ! | TGTCCATCACATTTAAAACT+TGG | + | chr7.3:54030161-54030180 | None:intergenic | 30.0% |
| ! | TGTGTTGATACTAATTTGCA+GGG | - | chr7.3:54029612-54029631 | MS.gene26019:CDS | 30.0% |
| ! | TTGTGTTGATACTAATTTGC+AGG | - | chr7.3:54029611-54029630 | MS.gene26019:CDS | 30.0% |
| !! | AGTGTGTTTCTGATATTTTC+TGG | + | chr7.3:54031588-54031607 | None:intergenic | 30.0% |
| !! | CATCATGTCATCTTTTTAAG+AGG | - | chr7.3:54031978-54031997 | MS.gene26019:intron | 30.0% |
| !! | CTGATTCCTTCTAAAATTAG+GGG | + | chr7.3:54030275-54030294 | None:intergenic | 30.0% |
| !! | GACCTAAAATTAACTTGCAT+TGG | + | chr7.3:54030906-54030925 | None:intergenic | 30.0% |
| !! | GCAGTAACATTTTGAGAAAA+TGG | - | chr7.3:54029012-54029031 | MS.gene26019:intron | 30.0% |
| !! | GCTGATTCCTTCTAAAATTA+GGG | + | chr7.3:54030276-54030295 | None:intergenic | 30.0% |
| !! | TTAGAAATTTTAGGTGGACA+TGG | - | chr7.3:54031199-54031218 | MS.gene26019:intron | 30.0% |
| !!! | AGTTATTTTAAGGTCAGCAA+TGG | - | chr7.3:54029538-54029557 | MS.gene26019:intron | 30.0% |
| !!! | CGTGTATTTTTTGCAAATTC+TGG | - | chr7.3:54031530-54031549 | MS.gene26019:intron | 30.0% |
| AAACTCGCTTCTTTGTTCAT+TGG | - | chr7.3:54030928-54030947 | MS.gene26019:intron | 35.0% | |
| AAATGCTTGTGATGAAACTG+GGG | - | chr7.3:54031880-54031899 | MS.gene26019:intron | 35.0% | |
| AACTCGCTTCTTTGTTCATT+GGG | - | chr7.3:54030929-54030948 | MS.gene26019:intron | 35.0% | |
| AATAGTAGAAACAAAGGGGA+TGG | - | chr7.3:54028810-54028829 | MS.gene26019:intron | 35.0% | |
| AATTCTGGATGTCATAAGGA+TGG | - | chr7.3:54030629-54030648 | MS.gene26019:intron | 35.0% | |
| ACAATTTGTGTTGTGGTGTT+TGG | - | chr7.3:54029182-54029201 | MS.gene26019:intron | 35.0% | |
| AGAGCAGCATTACAAATAAG+AGG | + | chr7.3:54032858-54032877 | None:intergenic | 35.0% | |
| AGGTAGATCAGGATATCTTT+GGG | - | chr7.3:54032686-54032705 | MS.gene26019:intron | 35.0% | |
| AGGTATGCATCATCTAATCT+TGG | - | chr7.3:54031921-54031940 | MS.gene26019:intron | 35.0% | |
| AGTATTTGGATTGTAGTGGT+GGG | - | chr7.3:54028588-54028607 | MS.gene26019:CDS | 35.0% | |
| ATAAGTACCCACTATGTACT+TGG | + | chr7.3:54028504-54028523 | None:intergenic | 35.0% | |
| ATAATGAGAGCTGAAGAGAA+TGG | - | chr7.3:54032195-54032214 | MS.gene26019:intron | 35.0% | |
| ATGGTACAAAGAAGATGGAA+GGG | - | chr7.3:54031007-54031026 | MS.gene26019:intron | 35.0% | |
| ATGTAGGTTCAATGTGGTTT+AGG | - | chr7.3:54032666-54032685 | MS.gene26019:intron | 35.0% | |
| CAAAGCAGGAATACAACAAA+GGG | - | chr7.3:54032029-54032048 | MS.gene26019:intron | 35.0% | |
| CAATTTGTGTTGTGGTGTTT+GGG | - | chr7.3:54029183-54029202 | MS.gene26019:intron | 35.0% | |
| CATCATCTAATCTTGGTATC+CGG | - | chr7.3:54031928-54031947 | MS.gene26019:intron | 35.0% | |
| CTGGAAAAGGTAATGTTGTT+AGG | - | chr7.3:54033090-54033109 | MS.gene26019:CDS | 35.0% | |
| CTGTTGAATTAACTCTACAG+CGG | + | chr7.3:54031774-54031793 | None:intergenic | 35.0% | |
| GAAATGCTTGTGATGAAACT+GGG | - | chr7.3:54031879-54031898 | MS.gene26019:intron | 35.0% | |
| GAACCACAGAGATTCTTAAT+AGG | + | chr7.3:54031327-54031346 | None:intergenic | 35.0% | |
| GACATGATGTACTCATTTAC+TGG | + | chr7.3:54031967-54031986 | None:intergenic | 35.0% | |
| GATACATCAGATAGGAAAGT+AGG | + | chr7.3:54032906-54032925 | None:intergenic | 35.0% | |
| GCTGTAGAGTTAATTCAACA+GGG | - | chr7.3:54031773-54031792 | MS.gene26019:intron | 35.0% | |
| GGAAATACAAAGAGTGAAGT+AGG | + | chr7.3:54031269-54031288 | None:intergenic | 35.0% | |
| GTCAGAAAAATAAGGTGGAA+GGG | - | chr7.3:54031036-54031055 | MS.gene26019:intron | 35.0% | |
| GTCGCTTCTGCTATAAATTA+TGG | - | chr7.3:54032804-54032823 | MS.gene26019:CDS | 35.0% | |
| GTTGGTTAATATGTTGGGTA+AGG | - | chr7.3:54030958-54030977 | MS.gene26019:intron | 35.0% | |
| TAGAAGGGGAAAAGTGAAAA+TGG | - | chr7.3:54029425-54029444 | MS.gene26019:intron | 35.0% | |
| TAGAGTTGTACATCCACATA+TGG | - | chr7.3:54030345-54030364 | MS.gene26019:intron | 35.0% | |
| TAGGTAGATCAGGATATCTT+TGG | - | chr7.3:54032685-54032704 | MS.gene26019:intron | 35.0% | |
| TATGGTACAAAGAAGATGGA+AGG | - | chr7.3:54031006-54031025 | MS.gene26019:intron | 35.0% | |
| TCAGAAAAATAAGGTGGAAG+GGG | - | chr7.3:54031037-54031056 | MS.gene26019:intron | 35.0% | |
| TCGAAACTTACATTGAAGCA+CGG | - | chr7.3:54028844-54028863 | MS.gene26019:intron | 35.0% | |
| TGTAGGAAAGAGAGATAGAA+GGG | - | chr7.3:54029410-54029429 | MS.gene26019:intron | 35.0% | |
| TGTCAGAAAAATAAGGTGGA+AGG | - | chr7.3:54031035-54031054 | MS.gene26019:intron | 35.0% | |
| TGTGACTGAACTATAAACTG+TGG | - | chr7.3:54029464-54029483 | MS.gene26019:intron | 35.0% | |
| TGTTGAAGGGAATGAGTATT+TGG | - | chr7.3:54028574-54028593 | MS.gene26019:CDS | 35.0% | |
| TTAGCTGCCACTGTAAATTA+TGG | - | chr7.3:54031071-54031090 | MS.gene26019:intron | 35.0% | |
| TTCCATCTTCTTTGTACCAT+AGG | + | chr7.3:54031007-54031026 | None:intergenic | 35.0% | |
| TTTGCATATGTAACCAAAGC+AGG | - | chr7.3:54032015-54032034 | MS.gene26019:intron | 35.0% | |
| ! | ATGAACAAAGAAGCGAGTTT+TGG | + | chr7.3:54030928-54030947 | None:intergenic | 35.0% |
| ! | CGCCAATGCAAGTTAATTTT+AGG | - | chr7.3:54030901-54030920 | MS.gene26019:intron | 35.0% |
| ! | CTCAATCCCCTAATTTTAGA+AGG | - | chr7.3:54030266-54030285 | MS.gene26019:intron | 35.0% |
| ! | GACAGTTGATATTAGGATGA+GGG | - | chr7.3:54032534-54032553 | MS.gene26019:intron | 35.0% |
| ! | GCATGATAAGTTGAAATGGT+TGG | - | chr7.3:54032117-54032136 | MS.gene26019:intron | 35.0% |
| ! | GCATTTAATATGGTTTGCAG+AGG | - | chr7.3:54030474-54030493 | MS.gene26019:intron | 35.0% |
| ! | GCTGTTGTTGTTGTTGAAAT+GGG | + | chr7.3:54028345-54028364 | None:intergenic | 35.0% |
| ! | TGATAAGTTGAAATGGTTGG+TGG | - | chr7.3:54032120-54032139 | MS.gene26019:intron | 35.0% |
| ! | TGCATTTCCATACTCTAAGA+AGG | + | chr7.3:54031747-54031766 | None:intergenic | 35.0% |
| ! | TGCTGTTGTTGTTGTTGAAA+TGG | + | chr7.3:54028346-54028365 | None:intergenic | 35.0% |
| ! | TGGCAAGTGTCATTATATCA+GGG | + | chr7.3:54032734-54032753 | None:intergenic | 35.0% |
| ! | TTCGGTGTAATTATATGCCT+TGG | - | chr7.3:54028939-54028958 | MS.gene26019:intron | 35.0% |
| ! | TTGGCAAGTGTCATTATATC+AGG | + | chr7.3:54032735-54032754 | None:intergenic | 35.0% |
| !! | GGCTGATTCCTTCTAAAATT+AGG | + | chr7.3:54030277-54030296 | None:intergenic | 35.0% |
| !! | GGTACTTTTTGATAGACCTA+TGG | - | chr7.3:54030988-54031007 | MS.gene26019:intron | 35.0% |
| !! | TTGTGTTGTTTGCAGAAATG+TGG | + | chr7.3:54028301-54028320 | None:intergenic | 35.0% |
| AAAGCTGTTGTTGATCAAGC+TGG | - | chr7.3:54028653-54028672 | MS.gene26019:CDS | 40.0% | |
| AAGCTGTTGTTGATCAAGCT+GGG | - | chr7.3:54028654-54028673 | MS.gene26019:CDS | 40.0% | |
| AAGGCTAAAAACTCAGTAGC+TGG | + | chr7.3:54031629-54031648 | None:intergenic | 40.0% | |
| AATGGTATGTGTGGTTGGAA+AGG | - | chr7.3:54029556-54029575 | MS.gene26019:intron | 40.0% | |
| ACACAAGATGCTGTCTAAAG+AGG | + | chr7.3:54029597-54029616 | None:intergenic | 40.0% | |
| ACACTCATAGTGTTAGACAC+TGG | - | chr7.3:54029081-54029100 | MS.gene26019:intron | 40.0% | |
| ACTCGCTTCTTTGTTCATTG+GGG | - | chr7.3:54030930-54030949 | MS.gene26019:intron | 40.0% | |
| AGATCTCTCACAACTCTAGT+GGG | - | chr7.3:54029381-54029400 | MS.gene26019:intron | 40.0% | |
| AGATTCATTGCAGGTACATG+TGG | - | chr7.3:54030319-54030338 | MS.gene26019:intron | 40.0% | |
| AGGCCTATTAAGAATCTCTG+TGG | - | chr7.3:54031321-54031340 | MS.gene26019:intron | 40.0% | |
| ATACTAGAAGGCCAGACTTT+CGG | + | chr7.3:54033064-54033083 | None:intergenic | 40.0% | |
| ATATTGATCTCCGAGAACTC+TGG | + | chr7.3:54030503-54030522 | None:intergenic | 40.0% | |
| ATCGAGGGTAGTGAAGAATT+GGG | + | chr7.3:54028379-54028398 | None:intergenic | 40.0% | |
| ATGCTGTTGAAAAAGAGCCA+GGG | - | chr7.3:54030013-54030032 | MS.gene26019:intron | 40.0% | |
| ATGGTATGTGTGGTTGGAAA+GGG | - | chr7.3:54029557-54029576 | MS.gene26019:intron | 40.0% | |
| ATGTATAGAACTTTCTCCGC+TGG | + | chr7.3:54030872-54030891 | None:intergenic | 40.0% | |
| ATTGAGCTCTACCGTCATAA+AGG | + | chr7.3:54030252-54030271 | None:intergenic | 40.0% | |
| ATTGCTTCATAATTGGACCC+TGG | + | chr7.3:54030033-54030052 | None:intergenic | 40.0% | |
| ATTGTGCTTGAGAAAGGGAA+AGG | - | chr7.3:54028536-54028555 | MS.gene26019:CDS | 40.0% | |
| CAAATCATTAGCGGTTGTGT+CGG | + | chr7.3:54028905-54028924 | None:intergenic | 40.0% | |
| CAATGTGGTTTAGGTAGATC+AGG | - | chr7.3:54032675-54032694 | MS.gene26019:intron | 40.0% | |
| CAGAAACACACTTGTACTGA+CGG | - | chr7.3:54031596-54031615 | MS.gene26019:intron | 40.0% | |
| CAGTGTGAAGAAGACTAAAG+AGG | - | chr7.3:54028463-54028482 | MS.gene26019:CDS | 40.0% | |
| CCAAAGCAGGAATACAACAA+AGG | - | chr7.3:54032028-54032047 | MS.gene26019:intron | 40.0% | |
| CCTTTAGCAATTGCTTCCAT+GGG | - | chr7.3:54031645-54031664 | MS.gene26019:intron | 40.0% | |
| CGAAATGCTTGTGATGAAAC+TGG | - | chr7.3:54031878-54031897 | MS.gene26019:intron | 40.0% | |
| CGATGTCGATGGTAAAGTAT+AGG | - | chr7.3:54030667-54030686 | MS.gene26019:intron | 40.0% | |
| CGCTGTAGAGTTAATTCAAC+AGG | - | chr7.3:54031772-54031791 | MS.gene26019:intron | 40.0% | |
| CTGTCTTCTACAATTGCGTT+TGG | + | chr7.3:54028446-54028465 | None:intergenic | 40.0% | |
| CTTACATTGAAGCACGGATA+CGG | - | chr7.3:54028850-54028869 | MS.gene26019:intron | 40.0% | |
| CTTAGAGTATGGAAATGCAC+CGG | - | chr7.3:54031748-54031767 | MS.gene26019:intron | 40.0% | |
| GAAGAAGCCAAGTACATAGT+GGG | - | chr7.3:54028494-54028513 | MS.gene26019:CDS | 40.0% | |
| GAATCAGCCAATGTTAAGTG+TGG | - | chr7.3:54030288-54030307 | MS.gene26019:intron | 40.0% | |
| GACCTATGGTACAAAGAAGA+TGG | - | chr7.3:54031002-54031021 | MS.gene26019:intron | 40.0% | |
| GAGTATTTGGATTGTAGTGG+TGG | - | chr7.3:54028587-54028606 | MS.gene26019:CDS | 40.0% | |
| GCTATAAATTATGGCGACCA+TGG | - | chr7.3:54032813-54032832 | MS.gene26019:CDS | 40.0% | |
| GGAGTAACCTTCTTAGAGTA+TGG | - | chr7.3:54031737-54031756 | MS.gene26019:intron | 40.0% | |
| GTAGGAAAGAGAGATAGAAG+GGG | - | chr7.3:54029411-54029430 | MS.gene26019:intron | 40.0% | |
| GTCTGCATCTGATTGAATTC+TGG | - | chr7.3:54030614-54030633 | MS.gene26019:intron | 40.0% | |
| GTGTAGGAAAGAGAGATAGA+AGG | - | chr7.3:54029409-54029428 | MS.gene26019:intron | 40.0% | |
| GTTGTTTGCAGAAATGTGGT+GGG | + | chr7.3:54028297-54028316 | None:intergenic | 40.0% | |
| TACTGGCATACAAGTACAAC+CGG | + | chr7.3:54031950-54031969 | None:intergenic | 40.0% | |
| TAGACTTGTGTGATCGAACA+TGG | - | chr7.3:54029776-54029795 | MS.gene26019:CDS | 40.0% | |
| TATAGCAGAAGCGACTTTCT+CGG | + | chr7.3:54032799-54032818 | None:intergenic | 40.0% | |
| TATCTATCACTCTCTTCCTC+AGG | - | chr7.3:54028697-54028716 | MS.gene26019:CDS | 40.0% | |
| TATGTTGGGTAAGGATGCTA+AGG | - | chr7.3:54030967-54030986 | MS.gene26019:intron | 40.0% | |
| TGAAGAAGCCAAGTACATAG+TGG | - | chr7.3:54028493-54028512 | MS.gene26019:CDS | 40.0% | |
| TGATGCTCCACACTTAACAT+TGG | + | chr7.3:54030298-54030317 | None:intergenic | 40.0% | |
| TGCTCCAACATCTACTTTGA+GGG | + | chr7.3:54028423-54028442 | None:intergenic | 40.0% | |
| TGGTACAAAGAAGATGGAAG+GGG | - | chr7.3:54031008-54031027 | MS.gene26019:intron | 40.0% | |
| TGTATAGAACTTTCTCCGCT+GGG | + | chr7.3:54030871-54030890 | None:intergenic | 40.0% | |
| TTCCAGCTGTCAATACTAGA+AGG | + | chr7.3:54033076-54033095 | None:intergenic | 40.0% | |
| TTCCCTTTCTCAAGCACAAT+CGG | + | chr7.3:54028536-54028555 | None:intergenic | 40.0% | |
| TTGAGCTCTACCGTCATAAA+GGG | + | chr7.3:54030251-54030270 | None:intergenic | 40.0% | |
| TTGTTCATTGGGGTAGAAGT+TGG | - | chr7.3:54030940-54030959 | MS.gene26019:intron | 40.0% | |
| ! | AACATCTACTTTGAGGGATG+CGG | + | chr7.3:54028417-54028436 | None:intergenic | 40.0% |
| ! | AATTTTCCCTTGTCCACATG+CGG | - | chr7.3:54030811-54030830 | MS.gene26019:intron | 40.0% |
| ! | AGAAACACACTTGTACTGAC+GGG | - | chr7.3:54031597-54031616 | MS.gene26019:intron | 40.0% |
| ! | AGGTAGTGAAGTAGGTGTTT+TGG | - | chr7.3:54030687-54030706 | MS.gene26019:intron | 40.0% |
| ! | CAAGATTGCTGCAGTTTTTG+TGG | - | chr7.3:54031796-54031815 | MS.gene26019:intron | 40.0% |
| ! | CCTTTGTTGTATTCCTGCTT+TGG | + | chr7.3:54032031-54032050 | None:intergenic | 40.0% |
| ! | GGACAGTTGATATTAGGATG+AGG | - | chr7.3:54032533-54032552 | MS.gene26019:intron | 40.0% |
| ! | GTTTTTGTGGAACCTATCCA+AGG | - | chr7.3:54031809-54031828 | MS.gene26019:intron | 40.0% |
| ! | TACTCTAAGAAGGTTACTCC+AGG | + | chr7.3:54031737-54031756 | None:intergenic | 40.0% |
| ! | TGTTGTTTGCAGAAATGTGG+TGG | + | chr7.3:54028298-54028317 | None:intergenic | 40.0% |
| ! | TTGGTCATGGTGATGATGAT+TGG | - | chr7.3:54028627-54028646 | MS.gene26019:CDS | 40.0% |
| !! | ACATAGTGGGTACTTATGCA+AGG | - | chr7.3:54028507-54028526 | MS.gene26019:CDS | 40.0% |
| !! | CATAGTGGGTACTTATGCAA+GGG | - | chr7.3:54028508-54028527 | MS.gene26019:CDS | 40.0% |
| !! | CGGACTGATTTGTTTCATGA+AGG | - | chr7.3:54030583-54030602 | MS.gene26019:intron | 40.0% |
| !! | CTAGTATTGACAGCTGGAAA+AGG | - | chr7.3:54033077-54033096 | MS.gene26019:CDS | 40.0% |
| !! | GAAATGGGTGAGTTTGTTGT+TGG | + | chr7.3:54028330-54028349 | None:intergenic | 40.0% |
| !! | TCGAACATGGTTCTAACTGT+TGG | - | chr7.3:54029789-54029808 | MS.gene26019:CDS | 40.0% |
| AAACCGTGTCTCTGTTCACA+CGG | - | chr7.3:54030369-54030388 | MS.gene26019:intron | 45.0% | |
| AAGGTCAGCAATGGTATGTG+TGG | - | chr7.3:54029547-54029566 | MS.gene26019:intron | 45.0% | |
| AAGGTTACTCCAGGCATAAC+AGG | + | chr7.3:54031728-54031747 | None:intergenic | 45.0% | |
| AATGTTACTGCGACACTCCT+CGG | + | chr7.3:54029003-54029022 | None:intergenic | 45.0% | |
| AGGATATCTTTGGGCTCATG+AGG | - | chr7.3:54032695-54032714 | MS.gene26019:intron | 45.0% | |
| ATGAAAGAGATTCGCGGTGT+GGG | - | chr7.3:54032984-54033003 | MS.gene26019:CDS | 45.0% | |
| CCAACACCGATAGAAAATCG+AGG | + | chr7.3:54029061-54029080 | None:intergenic | 45.0% | |
| CCAGGCATAACAGGTTCAAA+AGG | + | chr7.3:54031719-54031738 | None:intergenic | 45.0% | |
| CCCATGGAAGCAATTGCTAA+AGG | + | chr7.3:54031648-54031667 | None:intergenic | 45.0% | |
| CGACACATGAAAGAGATTCG+CGG | - | chr7.3:54032978-54032997 | MS.gene26019:CDS | 45.0% | |
| GAGATCTCTCACAACTCTAG+TGG | - | chr7.3:54029380-54029399 | MS.gene26019:intron | 45.0% | |
| GAGCATCAGAGATTCATTGC+AGG | - | chr7.3:54030310-54030329 | MS.gene26019:intron | 45.0% | |
| GATCGAGGGTAGTGAAGAAT+TGG | + | chr7.3:54028380-54028399 | None:intergenic | 45.0% | |
| GATGCTGTTGAAAAAGAGCC+AGG | - | chr7.3:54030012-54030031 | MS.gene26019:intron | 45.0% | |
| GCATCCCTCAAAGTAGATGT+TGG | - | chr7.3:54028416-54028435 | MS.gene26019:CDS | 45.0% | |
| GCCTTTAGCAATTGCTTCCA+TGG | - | chr7.3:54031644-54031663 | MS.gene26019:intron | 45.0% | |
| GCTGTTAATGCACTTGGTCA+TGG | - | chr7.3:54028614-54028633 | MS.gene26019:CDS | 45.0% | |
| GGATGTCATAAGGATGGTTG+AGG | - | chr7.3:54030635-54030654 | MS.gene26019:intron | 45.0% | |
| GGCACTTCTTGTGTTTGATG+AGG | - | chr7.3:54031901-54031920 | MS.gene26019:intron | 45.0% | |
| GTATAGAACTTTCTCCGCTG+GGG | + | chr7.3:54030870-54030889 | None:intergenic | 45.0% | |
| GTCATAAGGATGGTTGAGGA+AGG | - | chr7.3:54030639-54030658 | MS.gene26019:intron | 45.0% | |
| GTCTGTGAAGCCCTTTATGA+CGG | - | chr7.3:54030238-54030257 | MS.gene26019:intron | 45.0% | |
| GTGCTCCAACATCTACTTTG+AGG | + | chr7.3:54028424-54028443 | None:intergenic | 45.0% | |
| TCAAATTGAGATGACCCCAG+CGG | - | chr7.3:54030853-54030872 | MS.gene26019:intron | 45.0% | |
| TCAGCAATGGTATGTGTGGT+TGG | - | chr7.3:54029551-54029570 | MS.gene26019:intron | 45.0% | |
| TCGAGGGTAGTGAAGAATTG+GGG | + | chr7.3:54028378-54028397 | None:intergenic | 45.0% | |
| TGAATTAACTCTACAGCGGC+CGG | + | chr7.3:54031770-54031789 | None:intergenic | 45.0% | |
| TGGAACCTATCCAAGGAGAA+GGG | - | chr7.3:54031816-54031835 | MS.gene26019:intron | 45.0% | |
| TGTATATTCCCCCTTCTCCT+TGG | + | chr7.3:54031829-54031848 | None:intergenic | 45.0% | |
| ! | CACCGATTGTGCTTGAGAAA+GGG | - | chr7.3:54028531-54028550 | MS.gene26019:CDS | 45.0% |
| ! | CCTCGATTTTCTATCGGTGT+TGG | - | chr7.3:54029058-54029077 | MS.gene26019:intron | 45.0% |
| ! | CCTTTTGAACCTGTTATGCC+TGG | - | chr7.3:54031716-54031735 | MS.gene26019:intron | 45.0% |
| ! | GGGATTGCTGTTAATGCACT+TGG | - | chr7.3:54028608-54028627 | MS.gene26019:CDS | 45.0% |
| !! | CACCTGCAAAAGTACTTCCA+TGG | + | chr7.3:54032833-54032852 | None:intergenic | 45.0% |
| !! | GGAAGGTATTTCGATGTCGA+TGG | - | chr7.3:54030656-54030675 | MS.gene26019:intron | 45.0% |
| !! | TATATGCCTTGGTGTCGTGT+TGG | - | chr7.3:54028950-54028969 | MS.gene26019:intron | 45.0% |
| !!! | CATGGAAGTACTTTTGCAGG+TGG | - | chr7.3:54032831-54032850 | MS.gene26019:CDS | 45.0% |
| !!! | GACCATGGAAGTACTTTTGC+AGG | - | chr7.3:54032828-54032847 | MS.gene26019:CDS | 45.0% |
| AAGCGACTTTCTCGGTTACG+AGG | + | chr7.3:54032791-54032810 | None:intergenic | 50.0% | |
| ACACTTGCCAAACCTCTTGC+TGG | - | chr7.3:54032744-54032763 | MS.gene26019:intron | 50.0% | |
| ACTCTAGTGGGAAGTGGTGT+AGG | - | chr7.3:54029393-54029412 | MS.gene26019:intron | 50.0% | |
| ATTCCCCCTTCTCCTTGGAT+AGG | + | chr7.3:54031824-54031843 | None:intergenic | 50.0% | |
| CATCCGTGTGAACAGAGACA+CGG | + | chr7.3:54030375-54030394 | None:intergenic | 50.0% | |
| CATGAAAGAGATTCGCGGTG+TGG | - | chr7.3:54032983-54033002 | MS.gene26019:CDS | 50.0% | |
| CATTGAAGCACGGATACGGA+CGG | - | chr7.3:54028854-54028873 | MS.gene26019:intron | 50.0% | |
| CGCGGTGTGGGGTTAATTAT+AGG | - | chr7.3:54032996-54033015 | MS.gene26019:CDS | 50.0% | |
| CTCACAACTCTAGTGGGAAG+TGG | - | chr7.3:54029387-54029406 | MS.gene26019:intron | 50.0% | |
| GAACCTATCCAAGGAGAAGG+GGG | - | chr7.3:54031818-54031837 | MS.gene26019:intron | 50.0% | |
| GACTTTCTCGGTTACGAGGA+CGG | + | chr7.3:54032787-54032806 | None:intergenic | 50.0% | |
| GAGACACGGTTTGCCATATG+TGG | + | chr7.3:54030361-54030380 | None:intergenic | 50.0% | |
| GGAACCTATCCAAGGAGAAG+GGG | - | chr7.3:54031817-54031836 | MS.gene26019:intron | 50.0% | |
| GGATGTGTCAGCAACACCTT+TGG | - | chr7.3:54033028-54033047 | MS.gene26019:CDS | 50.0% | |
| GTGGAACCTATCCAAGGAGA+AGG | - | chr7.3:54031815-54031834 | MS.gene26019:intron | 50.0% | |
| TGAAAGAGATTCGCGGTGTG+GGG | - | chr7.3:54032985-54033004 | MS.gene26019:CDS | 50.0% | |
| TTTCGGCAAGCGTCTACCAA+AGG | + | chr7.3:54033047-54033066 | None:intergenic | 50.0% | |
| ! | CTTTGGGCTCATGAGGCTTT+TGG | - | chr7.3:54032702-54032721 | MS.gene26019:intron | 50.0% |
| ! | GCTTTTCCGCATGTGGACAA+GGG | + | chr7.3:54030820-54030839 | None:intergenic | 50.0% |
| ! | TCTACTTTGAGGGATGCGGT+TGG | + | chr7.3:54028413-54028432 | None:intergenic | 50.0% |
| ! | TGCTTTTCCGCATGTGGACA+AGG | + | chr7.3:54030821-54030840 | None:intergenic | 50.0% |
| !! | GCACCGATTGTGCTTGAGAA+AGG | - | chr7.3:54028530-54028549 | MS.gene26019:CDS | 50.0% |
| !! | GGCCTTCTAGTATTGACAGC+TGG | - | chr7.3:54033071-54033090 | MS.gene26019:CDS | 50.0% |
| ATAGGTAGGCCTCCAGCAAG+AGG | + | chr7.3:54032759-54032778 | None:intergenic | 55.0% | |
| CTTGCCAAACCTCTTGCTGG+AGG | - | chr7.3:54032747-54032766 | MS.gene26019:intron | 55.0% | |
| CTTGCTGGAGGCCTACCTAT+TGG | - | chr7.3:54032759-54032778 | MS.gene26019:intron | 55.0% | |
| GACACACCAACACGACACCA+AGG | + | chr7.3:54028959-54028978 | None:intergenic | 55.0% | |
| GACTAGGCGTGTCTCAGTGT+CGG | + | chr7.3:54028981-54029000 | None:intergenic | 55.0% | |
| GCAGAGGTCTCCAGAGTTCT+CGG | - | chr7.3:54030490-54030509 | MS.gene26019:intron | 55.0% | |
| GTAGACGCTTGCCGAAAGTC+TGG | - | chr7.3:54033050-54033069 | MS.gene26019:CDS | 55.0% | |
| GTTACGAGGACGGCTCCAAT+AGG | + | chr7.3:54032777-54032796 | None:intergenic | 55.0% | |
| TAGGCCTCCAGCAAGAGGTT+TGG | + | chr7.3:54032754-54032773 | None:intergenic | 55.0% | |
| TGCTTCCATGGGAGAACCCT+GGG | - | chr7.3:54031656-54031675 | MS.gene26019:intron | 55.0% | |
| TTGCTTCCATGGGAGAACCC+TGG | - | chr7.3:54031655-54031674 | MS.gene26019:intron | 55.0% | |
| TTGGTGGGAGCAGTGATCGA+GGG | + | chr7.3:54028394-54028413 | None:intergenic | 55.0% | |
| ! | ACTTTGAGGGATGCGGTTGG+TGG | + | chr7.3:54028410-54028429 | None:intergenic | 55.0% |
| ! | CTTTGAGGGATGCGGTTGGT+GGG | + | chr7.3:54028409-54028428 | None:intergenic | 55.0% |
| !! | GGTGTCTGCTTTTCCGCATG+TGG | + | chr7.3:54030827-54030846 | None:intergenic | 55.0% |
| ACTGAGACACGCCTAGTCCG+AGG | - | chr7.3:54028983-54029002 | MS.gene26019:intron | 60.0% | |
| ACTGCGACACTCCTCGGACT+AGG | + | chr7.3:54028997-54029016 | None:intergenic | 60.0% | |
| CGAGGACGGCTCCAATAGGT+AGG | + | chr7.3:54032773-54032792 | None:intergenic | 60.0% | |
| CGTCAAAGCAAGTGCGCCCA+GGG | + | chr7.3:54031675-54031694 | None:intergenic | 60.0% | |
| TACGGACGGTGGACACGACA+CGG | - | chr7.3:54028868-54028887 | MS.gene26019:intron | 60.0% | |
| TCGTCAAAGCAAGTGCGCCC+AGG | + | chr7.3:54031676-54031695 | None:intergenic | 60.0% | |
| TGAAGCACGGATACGGACGG+TGG | - | chr7.3:54028857-54028876 | MS.gene26019:intron | 60.0% | |
| ! | GTTGGTGGGAGCAGTGATCG+AGG | + | chr7.3:54028395-54028414 | None:intergenic | 60.0% |
| GTGCGCCCAGGGTTCTCCCA+TGG | + | chr7.3:54031664-54031683 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 54028287 | 54033205 | 54028287 | ID=MS.gene26019 |
| chr7.3 | mRNA | 54028287 | 54033205 | 54028287 | ID=MS.gene26019.t1;Parent=MS.gene26019 |
| chr7.3 | exon | 54032774 | 54033205 | 54032774 | ID=MS.gene26019.t1.exon1;Parent=MS.gene26019.t1 |
| chr7.3 | CDS | 54032774 | 54033205 | 54032774 | ID=cds.MS.gene26019.t1;Parent=MS.gene26019.t1 |
| chr7.3 | exon | 54029570 | 54030004 | 54029570 | ID=MS.gene26019.t1.exon2;Parent=MS.gene26019.t1 |
| chr7.3 | CDS | 54029570 | 54030004 | 54029570 | ID=cds.MS.gene26019.t1;Parent=MS.gene26019.t1 |
| chr7.3 | exon | 54028287 | 54028820 | 54028287 | ID=MS.gene26019.t1.exon3;Parent=MS.gene26019.t1 |
| chr7.3 | CDS | 54028287 | 54028820 | 54028287 | ID=cds.MS.gene26019.t1;Parent=MS.gene26019.t1 |
| Gene Sequence |
| Protein sequence |
