Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010912.t1 | XP_013448465.1 | 93.6 | 470 | 27 | 1 | 1 | 467 | 1 | 470 | 2.20E-248 | 867.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010912.t1 | Q9M8M7 | 73.8 | 420 | 108 | 1 | 45 | 464 | 40 | 457 | 9.9e-181 | 634.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010912.t1 | A0A072TYI8 | 93.6 | 470 | 27 | 1 | 1 | 467 | 1 | 470 | 1.6e-248 | 867.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010912.t1 | MTR_7g451450 | 95.983 | 473 | 10 | 2 | 1 | 467 | 1 | 470 | 0.0 | 923 |
| MS.gene010912.t1 | MTR_3g465800 | 32.168 | 429 | 243 | 12 | 67 | 460 | 55 | 470 | 1.78e-57 | 197 |
| MS.gene010912.t1 | MTR_3g465800 | 32.439 | 410 | 232 | 11 | 83 | 460 | 3 | 399 | 2.79e-55 | 189 |
| MS.gene010912.t1 | MTR_7g072420 | 30.414 | 411 | 245 | 10 | 80 | 460 | 79 | 478 | 1.86e-48 | 173 |
| MS.gene010912.t1 | MTR_8g091660 | 29.340 | 409 | 252 | 10 | 80 | 460 | 79 | 478 | 2.89e-44 | 162 |
| MS.gene010912.t1 | MTR_4g076100 | 28.235 | 425 | 252 | 13 | 84 | 461 | 81 | 499 | 3.78e-40 | 151 |
| MS.gene010912.t1 | MTR_3g118070 | 34.448 | 299 | 169 | 10 | 84 | 368 | 19 | 304 | 4.04e-34 | 132 |
| MS.gene010912.t1 | MTR_3g118070 | 34.448 | 299 | 169 | 10 | 84 | 368 | 76 | 361 | 5.75e-34 | 133 |
| MS.gene010912.t1 | MTR_4g076100 | 27.978 | 361 | 209 | 12 | 146 | 461 | 1 | 355 | 1.84e-29 | 119 |
| MS.gene010912.t1 | MTR_8g007510 | 63.158 | 57 | 20 | 1 | 49 | 105 | 54 | 109 | 4.25e-16 | 74.7 |
| MS.gene010912.t1 | MTR_4g128620 | 24.289 | 387 | 199 | 15 | 142 | 439 | 416 | 797 | 3.09e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010912.t1 | AT1G80600 | 73.810 | 420 | 108 | 1 | 45 | 464 | 40 | 457 | 0.0 | 652 |
| MS.gene010912.t1 | AT5G46180 | 29.902 | 408 | 270 | 7 | 67 | 462 | 42 | 445 | 5.64e-52 | 182 |
| MS.gene010912.t1 | AT4G39660 | 28.541 | 466 | 273 | 9 | 29 | 463 | 40 | 476 | 1.60e-48 | 173 |
| MS.gene010912.t1 | AT2G38400 | 30.176 | 454 | 267 | 13 | 38 | 460 | 40 | 474 | 3.57e-48 | 172 |
| MS.gene010912.t1 | AT2G38400 | 30.995 | 442 | 255 | 13 | 38 | 448 | 40 | 462 | 1.69e-47 | 171 |
| MS.gene010912.t1 | AT4G39660 | 30.273 | 403 | 244 | 7 | 89 | 463 | 8 | 401 | 8.16e-46 | 164 |
| MS.gene010912.t1 | AT3G08860 | 29.302 | 430 | 258 | 13 | 65 | 460 | 61 | 478 | 1.40e-45 | 166 |
| MS.gene010912.t1 | AT3G08860 | 30.622 | 418 | 238 | 15 | 65 | 445 | 61 | 463 | 4.44e-44 | 161 |
| MS.gene010912.t1 | AT3G22200 | 28.271 | 428 | 247 | 13 | 84 | 460 | 70 | 488 | 8.06e-41 | 153 |
| MS.gene010912.t1 | AT3G22200 | 28.271 | 428 | 247 | 13 | 84 | 460 | 79 | 497 | 9.19e-41 | 153 |
| MS.gene010912.t1 | AT3G48730 | 30.530 | 321 | 173 | 12 | 84 | 377 | 80 | 377 | 3.15e-33 | 131 |
| MS.gene010912.t1 | AT5G63570 | 29.595 | 321 | 176 | 11 | 84 | 377 | 19 | 316 | 5.14e-31 | 124 |
| MS.gene010912.t1 | AT5G63570 | 30.195 | 308 | 168 | 10 | 84 | 367 | 82 | 366 | 9.91e-31 | 124 |
| MS.gene010912.t1 | AT5G57590 | 23.043 | 447 | 240 | 18 | 90 | 439 | 367 | 806 | 5.63e-14 | 75.1 |
Find 109 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTCCAACATCTACTTTA+AGG | 0.107418 | 7.2:+52849091 | None:intergenic |
| CTTTGGGCTCATGAGGCTTT+TGG | 0.183219 | 7.2:-52844522 | MS.gene010912:CDS |
| AAGCCAAACTTTGCATGTTT+TGG | 0.212771 | 7.2:-52844055 | MS.gene010912:CDS |
| TAGGTAGATCAGGATTTCTT+TGG | 0.249427 | 7.2:-52844539 | MS.gene010912:CDS |
| GTCGCTTCTGCTATAAATTA+TGG | 0.260232 | 7.2:-52844420 | MS.gene010912:CDS |
| CATCCAAAACATGCAAAGTT+TGG | 0.263191 | 7.2:+52844052 | None:intergenic |
| GTAGATGCTTGCCGAAATTC+TGG | 0.264977 | 7.2:-52844174 | MS.gene010912:CDS |
| TGTTGAAGGGAATGAGTATT+TGG | 0.291665 | 7.2:-52848938 | MS.gene010912:CDS |
| CGTGGTGTGGGGCTAATTAT+AGG | 0.304746 | 7.2:-52844228 | MS.gene010912:CDS |
| CGAAATACTTGTGATGAAAC+TGG | 0.311882 | 7.2:-52845374 | MS.gene010912:CDS |
| TTGTAGGTTCAATGTGGTTT+AGG | 0.327079 | 7.2:-52844558 | MS.gene010912:intron |
| AGGTAGATCAGGATTTCTTT+GGG | 0.352648 | 7.2:-52844538 | MS.gene010912:CDS |
| GATCGAGGGTAGTGAAGAAT+TGG | 0.360773 | 7.2:+52849135 | None:intergenic |
| CTGGAAAAGGTAATGTTGTT+AGG | 0.365988 | 7.2:-52844134 | MS.gene010912:CDS |
| TTTGGCAAGTGTCATTATAT+CGG | 0.381895 | 7.2:+52844491 | None:intergenic |
| TGCTCCAACATCTACTTTAA+GGG | 0.386778 | 7.2:+52849092 | None:intergenic |
| GGAGTGACCTTTGTAGAGTA+TGG | 0.390033 | 7.2:-52845515 | MS.gene010912:CDS |
| CAATGTGGTTTAGGTAGATC+AGG | 0.393669 | 7.2:-52844549 | MS.gene010912:CDS |
| ATCGAGGGTAGTGAAGAATT+GGG | 0.396352 | 7.2:+52849136 | None:intergenic |
| ATACGAGAAGGCCAGAATTT+CGG | 0.398348 | 7.2:+52844163 | None:intergenic |
| ATCAGATAGGAAAGTAGGTT+TGG | 0.398612 | 7.2:+52844326 | None:intergenic |
| ACACTTGCCAAACCTCTTGC+TGG | 0.401411 | 7.2:-52844480 | MS.gene010912:CDS |
| TTGGCAAGTGTCATTATATC+GGG | 0.403382 | 7.2:+52844492 | None:intergenic |
| AATAGCTGCTTCATTTGCTT+CGG | 0.404945 | 7.2:+52845697 | None:intergenic |
| CTGTCTTCTACAATTGCGTT+TGG | 0.405169 | 7.2:+52849069 | None:intergenic |
| AAGGTCACTCCAGGCATAAC+AGG | 0.408049 | 7.2:+52845527 | None:intergenic |
| TATAGCAGAAGCGACTTTCT+CGG | 0.409460 | 7.2:+52844428 | None:intergenic |
| TTCCCTTTCTCAAGCACAAT+CGG | 0.410612 | 7.2:+52848979 | None:intergenic |
| CTTGCTGGAGGCCTACCTAT+TGG | 0.419628 | 7.2:-52844465 | MS.gene010912:CDS |
| CTATCTGATGTATCAAAGAA+AGG | 0.423170 | 7.2:-52844312 | MS.gene010912:CDS |
| TGTATATTCCTCCTTCTCCT+TGG | 0.425017 | 7.2:+52845426 | None:intergenic |
| GATACATCAGATAGGAAAGT+AGG | 0.426197 | 7.2:+52844321 | None:intergenic |
| ACCGTTGATTATAACAGAAC+AGG | 0.426298 | 7.2:-52844103 | MS.gene010912:CDS |
| TGCTTTCATGGGAGAACCCT+GGG | 0.432453 | 7.2:-52845596 | MS.gene010912:CDS |
| GTTACGAGGACGGCTCCAAT+AGG | 0.437400 | 7.2:+52844450 | None:intergenic |
| ATTCCTCCTTCTCCTTGGAT+AGG | 0.444178 | 7.2:+52845431 | None:intergenic |
| CTTTCTTTGATACATCAGAT+AGG | 0.446280 | 7.2:+52844313 | None:intergenic |
| ATAAGTACCCACTATGTACT+TGG | 0.457777 | 7.2:+52849011 | None:intergenic |
| AGACTGTAGAAATTCTTTAG+TGG | 0.459904 | 7.2:+52845400 | None:intergenic |
| GGCCTTCTCGTATTGACAGC+TGG | 0.463785 | 7.2:-52844153 | MS.gene010912:CDS |
| GAAATGGGTGAGTTTGTTGT+TGG | 0.468980 | 7.2:+52849188 | None:intergenic |
| TTGGTCATGGCGATGATGAT+TGG | 0.471593 | 7.2:-52848885 | MS.gene010912:CDS |
| GCACCGATTGTGCTTGAGAA+AGG | 0.472175 | 7.2:-52848982 | MS.gene010912:CDS |
| AAAGCTGTTGTTGATCAAGC+TGG | 0.473890 | 7.2:-52848859 | MS.gene010912:CDS |
| CTCGTATTGACAGCTGGAAA+AGG | 0.480126 | 7.2:-52844147 | MS.gene010912:CDS |
| TAGGCCTCCAGCAAGAGGTT+TGG | 0.481587 | 7.2:+52844473 | None:intergenic |
| TATTTATCACTCTCTTCCTC+AGG | 0.482900 | 7.2:-52848815 | MS.gene010912:intron |
| AGGATTTCTTTGGGCTCATG+AGG | 0.494994 | 7.2:-52844529 | MS.gene010912:CDS |
| ACTTTAAGGGATGCGGTTGG+TGG | 0.507591 | 7.2:+52849105 | None:intergenic |
| AACATCTACTTTAAGGGATG+CGG | 0.507838 | 7.2:+52849098 | None:intergenic |
| CAGAAACACACATGTACTGA+TGG | 0.518706 | 7.2:-52845656 | MS.gene010912:CDS |
| GGGATTGCTGTTAATGCACT+TGG | 0.523563 | 7.2:-52848904 | MS.gene010912:CDS |
| CACCGATTGTGCTTGAGAAA+GGG | 0.524263 | 7.2:-52848981 | MS.gene010912:CDS |
| AGAGCAGCATTACAAATAAG+TGG | 0.524312 | 7.2:+52844369 | None:intergenic |
| TGTTGTTTGCAGAAATGTGG+TGG | 0.527430 | 7.2:+52849220 | None:intergenic |
| AGACGTGTCCGCAACACCAT+TGG | 0.530042 | 7.2:-52844196 | MS.gene010912:CDS |
| TCCTGTTCTGTTATAATCAA+CGG | 0.530607 | 7.2:+52844102 | None:intergenic |
| CCAGGCATAACAGGTTCAAA+AGG | 0.533452 | 7.2:+52845536 | None:intergenic |
| GTGAAAGAGATTCGTGGTGT+GGG | 0.533958 | 7.2:-52844240 | MS.gene010912:CDS |
| GAGTATTTGGATTGTAGTGG+TGG | 0.536009 | 7.2:-52848925 | MS.gene010912:CDS |
| CAGTGTGAAGAAGACTAAAG+AGG | 0.536780 | 7.2:-52849049 | MS.gene010912:CDS |
| GCTGTTAATGCACTTGGTCA+TGG | 0.540804 | 7.2:-52848898 | MS.gene010912:CDS |
| TGTAAAGTGTATGATGTTGA+AGG | 0.545867 | 7.2:-52848952 | MS.gene010912:CDS |
| AGCATCTACCAATGGTGTTG+CGG | 0.547220 | 7.2:+52844188 | None:intergenic |
| TACTCTACAAAGGTCACTCC+AGG | 0.547621 | 7.2:+52845518 | None:intergenic |
| TGAATTAACTCTACAGCGGC+CGG | 0.554420 | 7.2:+52845485 | None:intergenic |
| TTGCTTTCATGGGAGAACCC+TGG | 0.557270 | 7.2:-52845597 | MS.gene010912:CDS |
| CGACATGTGAAAGAGATTCG+TGG | 0.557274 | 7.2:-52844246 | MS.gene010912:CDS |
| CTTTAAGGGATGCGGTTGGT+GGG | 0.559069 | 7.2:+52849106 | None:intergenic |
| TGTCAAAGCAAGTGCACCCA+GGG | 0.560401 | 7.2:+52845580 | None:intergenic |
| GACACTTCTTGTGTTTGATG+AGG | 0.562294 | 7.2:-52845351 | MS.gene010912:intron |
| GTAGAACCTATCCAAGGAGA+AGG | 0.564280 | 7.2:-52845437 | MS.gene010912:CDS |
| GCTATAAATTATGGTGACCA+TGG | 0.565722 | 7.2:-52844411 | MS.gene010912:CDS |
| TTGTGTTGTTTGCAGAAATG+TGG | 0.566796 | 7.2:+52849217 | None:intergenic |
| GCATCCCTTAAAGTAGATGT+TGG | 0.569300 | 7.2:-52849096 | MS.gene010912:CDS |
| TGAAGAAGCCAAGTACATAG+TGG | 0.571534 | 7.2:-52849019 | MS.gene010912:CDS |
| GACTTTCTCGGTTACGAGGA+CGG | 0.580932 | 7.2:+52844440 | None:intergenic |
| GTTGGTGGGAGCAGTGATCG+AGG | 0.582595 | 7.2:+52849120 | None:intergenic |
| ACATAGTGGGTACTTATGCA+AGG | 0.583360 | 7.2:-52849005 | MS.gene010912:CDS |
| AATGAGTATTTGGATTGTAG+TGG | 0.589682 | 7.2:-52848928 | MS.gene010912:CDS |
| TCGAGGGTAGTGAAGAATTG+GGG | 0.590529 | 7.2:+52849137 | None:intergenic |
| CACCTGCAAAAGTACTTCCA+TGG | 0.596537 | 7.2:+52844394 | None:intergenic |
| AAGCGACTTTCTCGGTTACG+AGG | 0.599730 | 7.2:+52844436 | None:intergenic |
| AAGCTGTTGTTGATCAAGCT+GGG | 0.600000 | 7.2:-52848858 | MS.gene010912:CDS |
| ATTGTGCTTGAGAAAGGGAA+AGG | 0.601270 | 7.2:-52848976 | MS.gene010912:CDS |
| TTCCAGCTGTCAATACGAGA+AGG | 0.607878 | 7.2:+52844151 | None:intergenic |
| GTTGTTTGCAGAAATGTGGT+GGG | 0.608903 | 7.2:+52849221 | None:intergenic |
| AGAAACACACATGTACTGAT+GGG | 0.611638 | 7.2:-52845655 | MS.gene010912:CDS |
| TTGTCAAAGCAAGTGCACCC+AGG | 0.612655 | 7.2:+52845579 | None:intergenic |
| GAACCTATCCAAGGAGAAGG+AGG | 0.615524 | 7.2:-52845434 | MS.gene010912:CDS |
| ATAGGTAGGCCTCCAGCAAG+AGG | 0.618364 | 7.2:+52844468 | None:intergenic |
| GAAGAAGCCAAGTACATAGT+GGG | 0.622654 | 7.2:-52849018 | MS.gene010912:CDS |
| TGTAGAGTATGGAAATGCAC+CGG | 0.628371 | 7.2:-52845504 | MS.gene010912:CDS |
| TTGGTGGGAGCAGTGATCGA+GGG | 0.633959 | 7.2:+52849121 | None:intergenic |
| GTAAAGTGTATGATGTTGAA+GGG | 0.636015 | 7.2:-52848951 | MS.gene010912:CDS |
| TCTACTTTAAGGGATGCGGT+TGG | 0.636417 | 7.2:+52849102 | None:intergenic |
| CGAGGACGGCTCCAATAGGT+AGG | 0.637097 | 7.2:+52844454 | None:intergenic |
| CATAGTGGGTACTTATGCAA+GGG | 0.639478 | 7.2:-52849004 | MS.gene010912:CDS |
| TGTGAAAGAGATTCGTGGTG+TGG | 0.640546 | 7.2:-52844241 | MS.gene010912:CDS |
| TGCATTTCCATACTCTACAA+AGG | 0.641793 | 7.2:+52845508 | None:intergenic |
| AGTATTTGGATTGTAGTGGT+GGG | 0.647378 | 7.2:-52848924 | MS.gene010912:CDS |
| TTTCGGCAAGCATCTACCAA+TGG | 0.657642 | 7.2:+52844180 | None:intergenic |
| GAAATACTTGTGATGAAACT+GGG | 0.661945 | 7.2:-52845373 | MS.gene010912:CDS |
| CTTGCCAAACCTCTTGCTGG+AGG | 0.671134 | 7.2:-52844477 | MS.gene010912:CDS |
| GCTGTAGAGTTAATTCAGCA+AGG | 0.672063 | 7.2:-52845479 | MS.gene010912:CDS |
| TGGCAAGTGTCATTATATCG+GGG | 0.674684 | 7.2:+52844493 | None:intergenic |
| TGAAAGAGATTCGTGGTGTG+GGG | 0.698421 | 7.2:-52844239 | MS.gene010912:CDS |
| TGTTCTGTTATAATCAACGG+TGG | 0.707523 | 7.2:+52844105 | None:intergenic |
| TTGCTGAATTAACTCTACAG+CGG | 0.733803 | 7.2:+52845481 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTGTTTATTGTAAATAAT+TGG | - | chr7.2:52845206-52845225 | MS.gene010912:intron | 15.0% |
| !! | ATTTGTTTGAATTAAGATAA+TGG | - | chr7.2:52845143-52845162 | MS.gene010912:intron | 15.0% |
| !! | GCTAAATATTTAATTAACTT+CGG | + | chr7.2:52846739-52846758 | None:intergenic | 15.0% |
| !! | TCTTTAATAGTAGAAATAAA+GGG | - | chr7.2:52844560-52844579 | MS.gene010912:intron | 15.0% |
| !!! | AATAAATAAAGGTATATTAG+TGG | + | chr7.2:52848408-52848427 | None:intergenic | 15.0% |
| !!! | TTCTAAAATATCTTTCTTAA+CGG | - | chr7.2:52848181-52848200 | MS.gene010912:intron | 15.0% |
| !! | AACAATTCATAATATATGCA+AGG | - | chr7.2:52844622-52844641 | MS.gene010912:intron | 20.0% |
| !! | ACAAATTATTGCTTCATAAT+TGG | + | chr7.2:52846056-52846075 | None:intergenic | 20.0% |
| !! | AGAACTACTAAAAAAGAAAT+TGG | - | chr7.2:52848992-52849011 | MS.gene010912:CDS | 20.0% |
| !! | ATTAAGTACATCAATTGAAA+TGG | - | chr7.2:52848140-52848159 | MS.gene010912:intron | 20.0% |
| !! | CATGTTATTATTTGATAAAG+CGG | - | chr7.2:52846579-52846598 | MS.gene010912:intron | 20.0% |
| !! | CTTAAACAACACTTAATATA+AGG | - | chr7.2:52848556-52848575 | MS.gene010912:intron | 20.0% |
| !! | CTTTAATAGTAGAAATAAAG+GGG | - | chr7.2:52844561-52844580 | MS.gene010912:intron | 20.0% |
| !! | GAACTACTAAAAAAGAAATT+GGG | - | chr7.2:52848993-52849012 | MS.gene010912:CDS | 20.0% |
| !! | GTCTTTAATAGTAGAAATAA+AGG | - | chr7.2:52844559-52844578 | MS.gene010912:intron | 20.0% |
| !! | TAAAAAACCCTGAAAAATTA+GGG | + | chr7.2:52844504-52844523 | None:intergenic | 20.0% |
| !! | TTCTTTGTATTTCCATTTAT+CGG | - | chr7.2:52847296-52847315 | MS.gene010912:intron | 20.0% |
| !! | TTTAGAAAAGTTAGATAATG+AGG | + | chr7.2:52845860-52845879 | None:intergenic | 20.0% |
| !!! | AGTATTATTTTACTGACTTT+TGG | - | chr7.2:52845601-52845620 | MS.gene010912:CDS | 20.0% |
| !!! | ATTTTTTCCCTAATTTTTCA+GGG | - | chr7.2:52844494-52844513 | MS.gene010912:CDS | 20.0% |
| !!! | CTAAAAATCTCTTTTTTTGT+TGG | + | chr7.2:52845048-52845067 | None:intergenic | 20.0% |
| !!! | CTTATATTAAGTGTTGTTTA+AGG | + | chr7.2:52848558-52848577 | None:intergenic | 20.0% |
| !!! | GTGCTTAAATTTTGTTAAAA+AGG | - | chr7.2:52845668-52845687 | MS.gene010912:CDS | 20.0% |
| !!! | TCATTTCTATATGATTTTGT+AGG | - | chr7.2:52848695-52848714 | MS.gene010912:intron | 20.0% |
| !!! | TTGACTATATTTCTTTTAAC+AGG | - | chr7.2:52848666-52848685 | MS.gene010912:intron | 20.0% |
| !!! | TTGTTAAAAAGGTGTATAAA+AGG | - | chr7.2:52845679-52845698 | MS.gene010912:CDS | 20.0% |
| !!! | TTTAGATATAATTTGTGTTG+TGG | - | chr7.2:52845063-52845082 | MS.gene010912:intron | 20.0% |
| !!! | TTTTGTTTAGAAATTTTAGC+TGG | - | chr7.2:52847213-52847232 | MS.gene010912:intron | 20.0% |
| ! | AAATTGTCAGAAAAATAAGG+TGG | - | chr7.2:52847052-52847071 | MS.gene010912:intron | 25.0% |
| ! | AACACACTTCAAAATTATGT+AGG | + | chr7.2:52848616-52848635 | None:intergenic | 25.0% |
| ! | AAGCATTACTAGAATTTAGA+AGG | + | chr7.2:52846798-52846817 | None:intergenic | 25.0% |
| ! | ACTTGAGACACAATAAATAA+AGG | + | chr7.2:52848419-52848438 | None:intergenic | 25.0% |
| ! | ATAGAAATTAGTACACTCAA+TGG | - | chr7.2:52848510-52848529 | MS.gene010912:intron | 25.0% |
| ! | ATATAAGGACGTTTAATATG+AGG | - | chr7.2:52848571-52848590 | MS.gene010912:intron | 25.0% |
| ! | ATTATTAGACACAAGCAAAA+AGG | + | chr7.2:52845242-52845261 | None:intergenic | 25.0% |
| ! | ATTTCTATGAGTTCATATCT+TGG | - | chr7.2:52847410-52847429 | MS.gene010912:intron | 25.0% |
| ! | ATTTGCAAAAAATACACGAT+CGG | + | chr7.2:52847545-52847564 | None:intergenic | 25.0% |
| ! | CAATTGATGTACTTAATAGT+GGG | + | chr7.2:52848137-52848156 | None:intergenic | 25.0% |
| ! | CTAAAAAACCCTGAAAAATT+AGG | + | chr7.2:52844505-52844524 | None:intergenic | 25.0% |
| ! | TACCCTTTATTAATAGTACT+CGG | + | chr7.2:52848464-52848483 | None:intergenic | 25.0% |
| ! | TAGAAAGGAGTTTAATTGTT+GGG | - | chr7.2:52845173-52845192 | MS.gene010912:intron | 25.0% |
| ! | TCAATTGATGTACTTAATAG+TGG | + | chr7.2:52848138-52848157 | None:intergenic | 25.0% |
| ! | TCATTATGATCATTGAAAGA+TGG | - | chr7.2:52846427-52846446 | MS.gene010912:intron | 25.0% |
| ! | TTAGAAAGGAGTTTAATTGT+TGG | - | chr7.2:52845172-52845191 | MS.gene010912:intron | 25.0% |
| ! | TTTAACAGCATCAAATGTAA+TGG | + | chr7.2:52846020-52846039 | None:intergenic | 25.0% |
| ! | TTTCTATGAGTTCATATCTT+GGG | - | chr7.2:52847411-52847430 | MS.gene010912:intron | 25.0% |
| !! | ATAGTTTTTCTTCCGATAAA+TGG | + | chr7.2:52847311-52847330 | None:intergenic | 25.0% |
| !! | ATGAAATTGAAAGCTCTAAT+AGG | - | chr7.2:52847124-52847143 | MS.gene010912:intron | 25.0% |
| !! | GTAATTATATGTGTTGATGT+CGG | - | chr7.2:52844812-52844831 | MS.gene010912:intron | 25.0% |
| !! | TAGAAGTTGGTTAATATGTT+TGG | - | chr7.2:52846974-52846993 | MS.gene010912:intron | 25.0% |
| !! | TCACATTTAAAACTTGGAAA+AGG | + | chr7.2:52846171-52846190 | None:intergenic | 25.0% |
| !! | TTACCTTAAAGTCTTTTTGA+AGG | - | chr7.2:52845625-52845644 | MS.gene010912:CDS | 25.0% |
| !!! | ACTATTAATAAAGGGTACTT+TGG | - | chr7.2:52848467-52848486 | MS.gene010912:intron | 25.0% |
| !!! | AGTTATTTTAAGGTCAGTAA+TGG | - | chr7.2:52845497-52845516 | MS.gene010912:CDS | 25.0% |
| !!! | CATTTTTTCCCTAATTTTTC+AGG | - | chr7.2:52844493-52844512 | MS.gene010912:CDS | 25.0% |
| !!! | GTCTGTGTATAGTTATTTTA+AGG | - | chr7.2:52845487-52845506 | MS.gene010912:CDS | 25.0% |
| !!! | GTGAACTTTTTTAGAAAATC+AGG | - | chr7.2:52845404-52845423 | MS.gene010912:CDS | 25.0% |
| !!! | TTTCCAAGTTTTAAATGTGA+TGG | - | chr7.2:52846171-52846190 | MS.gene010912:intron | 25.0% |
| AAAAACTATAGTGCGGAAAA+AGG | - | chr7.2:52847322-52847341 | MS.gene010912:intron | 30.0% | |
| AATCAGTGTATGCAATTATC+AGG | - | chr7.2:52846196-52846215 | MS.gene010912:intron | 30.0% | |
| AATCAGTGTATGCAATTATG+GGG | - | chr7.2:52846107-52846126 | MS.gene010912:intron | 30.0% | |
| AATGAGTATTTGGATTGTAG+TGG | - | chr7.2:52844341-52844360 | MS.gene010912:CDS | 30.0% | |
| AATTCTGGATGTCATAAGAA+TGG | - | chr7.2:52846645-52846664 | MS.gene010912:intron | 30.0% | |
| ACAATCAGTGTATGCAATTA+TGG | - | chr7.2:52846105-52846124 | MS.gene010912:intron | 30.0% | |
| ACACCGAGTACTATTAATAA+AGG | - | chr7.2:52848458-52848477 | MS.gene010912:intron | 30.0% | |
| AGACTGTAGAAATTCTTTAG+TGG | + | chr7.2:52847872-52847891 | None:intergenic | 30.0% | |
| AGTACATCAATTGAAATGGT+TGG | - | chr7.2:52848144-52848163 | MS.gene010912:intron | 30.0% | |
| ATCATTGAAAGATGGTGATA+AGG | - | chr7.2:52846435-52846454 | MS.gene010912:intron | 30.0% | |
| CAATCAGTGTATGCAATTAT+GGG | - | chr7.2:52846106-52846125 | MS.gene010912:intron | 30.0% | |
| CACCGAGTACTATTAATAAA+GGG | - | chr7.2:52848459-52848478 | MS.gene010912:intron | 30.0% | |
| CATATAGTTATGATTACCTG+AGG | + | chr7.2:52844473-52844492 | None:intergenic | 30.0% | |
| CTACTAAAAAAGAAATTGGG+CGG | - | chr7.2:52848996-52849015 | MS.gene010912:CDS | 30.0% | |
| CTATCTGATGTATCAAAGAA+AGG | - | chr7.2:52848957-52848976 | MS.gene010912:CDS | 30.0% | |
| CTTTCTTTGATACATCAGAT+AGG | + | chr7.2:52848959-52848978 | None:intergenic | 30.0% | |
| GAAATACTTGTGATGAAACT+GGG | - | chr7.2:52847896-52847915 | MS.gene010912:intron | 30.0% | |
| GAAATTATCTTCTGTTCTGA+AGG | - | chr7.2:52847163-52847182 | MS.gene010912:intron | 30.0% | |
| GGGAAATTGTCAGAAAAATA+AGG | - | chr7.2:52847049-52847068 | MS.gene010912:intron | 30.0% | |
| GTAAAGTGTATGATGTTGAA+GGG | - | chr7.2:52844318-52844337 | MS.gene010912:CDS | 30.0% | |
| GTAATGCTTCGTATTGAATA+AGG | - | chr7.2:52846809-52846828 | MS.gene010912:intron | 30.0% | |
| GTCATCTCAATTTGACAAAA+AGG | + | chr7.2:52846869-52846888 | None:intergenic | 30.0% | |
| GTGTATAATCTCAAATGAAG+AGG | - | chr7.2:52846552-52846571 | MS.gene010912:intron | 30.0% | |
| GTTCCTTCAAAAAGACTTTA+AGG | + | chr7.2:52845631-52845650 | None:intergenic | 30.0% | |
| GTTGGTTAATATGTTTGGTA+AGG | - | chr7.2:52846979-52846998 | MS.gene010912:intron | 30.0% | |
| TAAAGTATAGGTAGTGAAGT+AGG | - | chr7.2:52846695-52846714 | MS.gene010912:intron | 30.0% | |
| TAACTTATGAAGCATGGATA+TGG | - | chr7.2:52844728-52844747 | MS.gene010912:intron | 30.0% | |
| TACTTCTCCATAATTTACAG+TGG | + | chr7.2:52847101-52847120 | None:intergenic | 30.0% | |
| TATAATCTCAAATGAAGAGG+TGG | - | chr7.2:52846555-52846574 | MS.gene010912:intron | 30.0% | |
| TATGTTTGGTAAGGATACTA+AGG | - | chr7.2:52846988-52847007 | MS.gene010912:intron | 30.0% | |
| TCCTGTTCTGTTATAATCAA+CGG | + | chr7.2:52849170-52849189 | None:intergenic | 30.0% | |
| TCTCCAAAATTAGAACAATG+AGG | + | chr7.2:52846141-52846160 | None:intergenic | 30.0% | |
| TGAAAAAGTGAGAATGTGAT+GGG | - | chr7.2:52845338-52845357 | MS.gene010912:intron | 30.0% | |
| TGATTCTCTCAAATCATTAG+CGG | + | chr7.2:52844781-52844800 | None:intergenic | 30.0% | |
| TGGAAATGATTGAATGTAAC+TGG | - | chr7.2:52844914-52844933 | MS.gene010912:intron | 30.0% | |
| TGTAAAACTTTAGTAGTGAG+AGG | - | chr7.2:52845929-52845948 | MS.gene010912:intron | 30.0% | |
| TGTAAAGTGTATGATGTTGA+AGG | - | chr7.2:52844317-52844336 | MS.gene010912:CDS | 30.0% | |
| TTAGCTAATCTTTCAAATGC+TGG | - | chr7.2:52846754-52846773 | MS.gene010912:intron | 30.0% | |
| TTCATAATATATGCAAGGTC+CGG | - | chr7.2:52844627-52844646 | MS.gene010912:intron | 30.0% | |
| TTGTTTCATGAAGGTTATTG+AGG | - | chr7.2:52846608-52846627 | MS.gene010912:intron | 30.0% | |
| ! | AATGTAATTTGCACTATGCT+CGG | + | chr7.2:52845965-52845984 | None:intergenic | 30.0% |
| ! | AATTTGTTTAGAACTGATGC+AGG | - | chr7.2:52847483-52847502 | MS.gene010912:intron | 30.0% |
| ! | AGACATTGAAGCATTTAATG+TGG | - | chr7.2:52846480-52846499 | MS.gene010912:intron | 30.0% |
| ! | ATAATTTGTGTTGTGGTGTT+TGG | - | chr7.2:52845070-52845089 | MS.gene010912:intron | 30.0% |
| ! | ATGATTTTGTAGGTTCAATG+TGG | - | chr7.2:52848705-52848724 | MS.gene010912:intron | 30.0% |
| ! | CCATTTTCTCAAAATGTTAC+CGG | + | chr7.2:52844897-52844916 | None:intergenic | 30.0% |
| ! | CTTTTAGCAATTGCTTTCAT+GGG | - | chr7.2:52847662-52847681 | MS.gene010912:intron | 30.0% |
| ! | GTTGTTGTTGTTGTTGAAAT+GGG | + | chr7.2:52844099-52844118 | None:intergenic | 30.0% |
| ! | TAATTTGTGTTGTGGTGTTT+GGG | - | chr7.2:52845071-52845090 | MS.gene010912:intron | 30.0% |
| ! | TGCTAGATTCTTTCTGTTTT+TGG | - | chr7.2:52844525-52844544 | MS.gene010912:CDS | 30.0% |
| ! | TGTCCATCACATTTAAAACT+TGG | + | chr7.2:52846177-52846196 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTTGTTGAAA+TGG | + | chr7.2:52844100-52844119 | None:intergenic | 30.0% |
| ! | TTTGGCAAGTGTCATTATAT+CGG | + | chr7.2:52848781-52848800 | None:intergenic | 30.0% |
| !! | CTGATTCCTTCTAAAATTAG+GGG | + | chr7.2:52846291-52846310 | None:intergenic | 30.0% |
| !! | GACCTAAAATTAACTTGCAT+TGG | + | chr7.2:52846927-52846946 | None:intergenic | 30.0% |
| !! | GCTGATTCCTTCTAAAATTA+GGG | + | chr7.2:52846292-52846311 | None:intergenic | 30.0% |
| !! | TGTGTGTTTCTGATATTTTC+TGG | + | chr7.2:52847605-52847624 | None:intergenic | 30.0% |
| !!! | CGTGTATTTTTTGCAAATTC+TGG | - | chr7.2:52847547-52847566 | MS.gene010912:intron | 30.0% |
| AAACTCGCTTCTTTGTTCAT+TGG | - | chr7.2:52846949-52846968 | MS.gene010912:intron | 35.0% | |
| AAAGCTAAAAACTCAGTAGC+TGG | + | chr7.2:52847646-52847665 | None:intergenic | 35.0% | |
| AACTCGCTTCTTTGTTCATT+GGG | - | chr7.2:52846950-52846969 | MS.gene010912:intron | 35.0% | |
| AAGCAGATAAAAGACTTGAG+TGG | + | chr7.2:52848279-52848298 | None:intergenic | 35.0% | |
| AAGTTTCACTGTAGAGCAAA+CGG | + | chr7.2:52845827-52845846 | None:intergenic | 35.0% | |
| AATAGCTGCTTCATTTGCTT+CGG | + | chr7.2:52847575-52847594 | None:intergenic | 35.0% | |
| AGAGCAGCATTACAAATAAG+TGG | + | chr7.2:52848903-52848922 | None:intergenic | 35.0% | |
| AGGTAGATCAGGATTTCTTT+GGG | - | chr7.2:52848731-52848750 | MS.gene010912:intron | 35.0% | |
| AGGTATGCACTATCTAATCT+TGG | - | chr7.2:52847938-52847957 | MS.gene010912:intron | 35.0% | |
| AGTATTTGGATTGTAGTGGT+GGG | - | chr7.2:52844345-52844364 | MS.gene010912:CDS | 35.0% | |
| ATAAGTACCCACTATGTACT+TGG | + | chr7.2:52844261-52844280 | None:intergenic | 35.0% | |
| ATATTGATCTTCGAGAACTC+TGG | + | chr7.2:52846519-52846538 | None:intergenic | 35.0% | |
| ATCAGATAGGAAAGTAGGTT+TGG | + | chr7.2:52848946-52848965 | None:intergenic | 35.0% | |
| ATCCATGCTTCATAAGTTAC+CGG | + | chr7.2:52844727-52844746 | None:intergenic | 35.0% | |
| ATGGTACAAAGAAGATGGAA+GGG | - | chr7.2:52847028-52847047 | MS.gene010912:intron | 35.0% | |
| ATGTATAGAACTTTCTCCGT+TGG | + | chr7.2:52846893-52846912 | None:intergenic | 35.0% | |
| CACTATCTAATCTTGGTATC+CGG | - | chr7.2:52847945-52847964 | MS.gene010912:intron | 35.0% | |
| CATCCAAAACATGCAAAGTT+TGG | + | chr7.2:52849220-52849239 | None:intergenic | 35.0% | |
| CCAACACCAATACAAAATTG+AGG | + | chr7.2:52844943-52844962 | None:intergenic | 35.0% | |
| CGAAATACTTGTGATGAAAC+TGG | - | chr7.2:52847895-52847914 | MS.gene010912:intron | 35.0% | |
| CTAACAACAGCGTATACTTA+GGG | + | chr7.2:52846231-52846250 | None:intergenic | 35.0% | |
| CTGGAAAAGGTAATGTTGTT+AGG | - | chr7.2:52849135-52849154 | MS.gene010912:CDS | 35.0% | |
| GAAAAGAGAAAGAGAGGAAA+AGG | - | chr7.2:52845371-52845390 | MS.gene010912:CDS | 35.0% | |
| GAACCACAGAGATTCTTAAT+AGG | + | chr7.2:52847348-52847367 | None:intergenic | 35.0% | |
| GACACTTAATATGAGAACAG+AGG | + | chr7.2:52848313-52848332 | None:intergenic | 35.0% | |
| GACATTGTGTACTCATTTAC+TGG | + | chr7.2:52847984-52848003 | None:intergenic | 35.0% | |
| GATACATCAGATAGGAAAGT+AGG | + | chr7.2:52848951-52848970 | None:intergenic | 35.0% | |
| GCTATAAATTATGGTGACCA+TGG | - | chr7.2:52848858-52848877 | MS.gene010912:CDS | 35.0% | |
| GTCGCTTCTGCTATAAATTA+TGG | - | chr7.2:52848849-52848868 | MS.gene010912:CDS | 35.0% | |
| GTGAAAAAGTGAGAATGTGA+TGG | - | chr7.2:52845337-52845356 | MS.gene010912:intron | 35.0% | |
| TAAGGACGTTTAATATGAGG+TGG | - | chr7.2:52848574-52848593 | MS.gene010912:intron | 35.0% | |
| TAGAAGGGGAAAAGTGAAAA+TGG | - | chr7.2:52845313-52845332 | MS.gene010912:intron | 35.0% | |
| TAGGTAGATCAGGATTTCTT+TGG | - | chr7.2:52848730-52848749 | MS.gene010912:intron | 35.0% | |
| TATGGTACAAAGAAGATGGA+AGG | - | chr7.2:52847027-52847046 | MS.gene010912:intron | 35.0% | |
| TATTTATCACTCTCTTCCTC+AGG | - | chr7.2:52844454-52844473 | MS.gene010912:CDS | 35.0% | |
| TCATAATATATGCAAGGTCC+GGG | - | chr7.2:52844628-52844647 | MS.gene010912:intron | 35.0% | |
| TCGGAAGAAAAACTATAGTG+CGG | - | chr7.2:52847315-52847334 | MS.gene010912:intron | 35.0% | |
| TCTAACAACAGCGTATACTT+AGG | + | chr7.2:52846232-52846251 | None:intergenic | 35.0% | |
| TGACATTGACATGTATAGAC+CGG | - | chr7.2:52844705-52844724 | MS.gene010912:intron | 35.0% | |
| TGCATTTCCATACTCTACAA+AGG | + | chr7.2:52847764-52847783 | None:intergenic | 35.0% | |
| TGCTCCAACATCTACTTTAA+GGG | + | chr7.2:52844180-52844199 | None:intergenic | 35.0% | |
| TGTAGGAAAGAGAGATAGAA+GGG | - | chr7.2:52845298-52845317 | MS.gene010912:intron | 35.0% | |
| TGTATAGAACTTTCTCCGTT+GGG | + | chr7.2:52846892-52846911 | None:intergenic | 35.0% | |
| TGTCAGAAAAATAAGGTGGA+AGG | - | chr7.2:52847056-52847075 | MS.gene010912:intron | 35.0% | |
| TGTTCTGTTATAATCAACGG+TGG | + | chr7.2:52849167-52849186 | None:intergenic | 35.0% | |
| TGTTGAAGGGAATGAGTATT+TGG | - | chr7.2:52844331-52844350 | MS.gene010912:CDS | 35.0% | |
| TTAGCTGCCACTGTAAATTA+TGG | - | chr7.2:52847091-52847110 | MS.gene010912:intron | 35.0% | |
| TTCCATCTTCTTTGTACCAT+AGG | + | chr7.2:52847028-52847047 | None:intergenic | 35.0% | |
| TTGCTGAATTAACTCTACAG+CGG | + | chr7.2:52847791-52847810 | None:intergenic | 35.0% | |
| TTGTAGGTTCAATGTGGTTT+AGG | - | chr7.2:52848711-52848730 | MS.gene010912:intron | 35.0% | |
| ! | AACATCTACTTTAAGGGATG+CGG | + | chr7.2:52844174-52844193 | None:intergenic | 35.0% |
| ! | AAGCCAAACTTTGCATGTTT+TGG | - | chr7.2:52849214-52849233 | MS.gene010912:CDS | 35.0% |
| ! | ACCGTTGATTATAACAGAAC+AGG | - | chr7.2:52849166-52849185 | MS.gene010912:CDS | 35.0% |
| ! | ACTTGTTTAAAGTCAGAGTG+TGG | + | chr7.2:52845990-52846009 | None:intergenic | 35.0% |
| ! | AGAAACACACATGTACTGAT+GGG | - | chr7.2:52847614-52847633 | MS.gene010912:intron | 35.0% |
| ! | ATGAACAAAGAAGCGAGTTT+TGG | + | chr7.2:52846949-52846968 | None:intergenic | 35.0% |
| ! | ATGTAATTTGCACTATGCTC+GGG | + | chr7.2:52845964-52845983 | None:intergenic | 35.0% |
| ! | CGCCAATGCAAGTTAATTTT+AGG | - | chr7.2:52846922-52846941 | MS.gene010912:intron | 35.0% |
| ! | CTCAATCCCCTAATTTTAGA+AGG | - | chr7.2:52846282-52846301 | MS.gene010912:intron | 35.0% |
| ! | GATAATGGCTTGTCTTAGAA+AGG | - | chr7.2:52845158-52845177 | MS.gene010912:intron | 35.0% |
| ! | GCTTTTAGCAATTGCTTTCA+TGG | - | chr7.2:52847661-52847680 | MS.gene010912:intron | 35.0% |
| ! | GTGCCTCATTGTTCTAATTT+TGG | - | chr7.2:52846135-52846154 | MS.gene010912:intron | 35.0% |
| ! | GTTTTTGTAGAACCTATCCA+AGG | - | chr7.2:52847826-52847845 | MS.gene010912:intron | 35.0% |
| ! | TGGATGCCTCAATTTTGTAT+TGG | - | chr7.2:52844934-52844953 | MS.gene010912:intron | 35.0% |
| ! | TTGGCAAGTGTCATTATATC+GGG | + | chr7.2:52848780-52848799 | None:intergenic | 35.0% |
| ! | TTGTTCATTGGGTTAGAAGT+TGG | - | chr7.2:52846961-52846980 | MS.gene010912:intron | 35.0% |
| !! | AGTCTTTTTGAAGGAACGAA+CGG | - | chr7.2:52845634-52845653 | MS.gene010912:CDS | 35.0% |
| !! | CCGGTAACATTTTGAGAAAA+TGG | - | chr7.2:52844894-52844913 | MS.gene010912:intron | 35.0% |
| !! | CCTCAATTTTGTATTGGTGT+TGG | - | chr7.2:52844940-52844959 | MS.gene010912:intron | 35.0% |
| !! | GGCTGATTCCTTCTAAAATT+AGG | + | chr7.2:52846293-52846312 | None:intergenic | 35.0% |
| !! | GGTACTTTTTGATAGACCTA+TGG | - | chr7.2:52847009-52847028 | MS.gene010912:intron | 35.0% |
| !! | TTGTGTTGTTTGCAGAAATG+TGG | + | chr7.2:52844055-52844074 | None:intergenic | 35.0% |
| !!! | AATTCATCCCCTTTTTTTGG+TGG | + | chr7.2:52844670-52844689 | None:intergenic | 35.0% |
| !!! | GGTAATTCATCCCCTTTTTT+TGG | + | chr7.2:52844673-52844692 | None:intergenic | 35.0% |
| AAAGCTGTTGTTGATCAAGC+TGG | - | chr7.2:52844410-52844429 | MS.gene010912:CDS | 40.0% | |
| AAGCTGTTGTTGATCAAGCT+GGG | - | chr7.2:52844411-52844430 | MS.gene010912:CDS | 40.0% | |
| AAGGTCAGTAATGGTATGTG+TGG | - | chr7.2:52845506-52845525 | MS.gene010912:CDS | 40.0% | |
| AATGGTATGTGTGGTTGGAA+AGG | - | chr7.2:52845515-52845534 | MS.gene010912:CDS | 40.0% | |
| ACACTCATAGTGTTAGACAC+TGG | - | chr7.2:52844963-52844982 | MS.gene010912:intron | 40.0% | |
| AGATCTCTCACAACTCTAGT+GGG | - | chr7.2:52845269-52845288 | MS.gene010912:intron | 40.0% | |
| AGATTCATTGCAGGTACATG+TGG | - | chr7.2:52846335-52846354 | MS.gene010912:intron | 40.0% | |
| AGGCCTATTAAGAATCTCTG+TGG | - | chr7.2:52847342-52847361 | MS.gene010912:intron | 40.0% | |
| ATACGAGAAGGCCAGAATTT+CGG | + | chr7.2:52849109-52849128 | None:intergenic | 40.0% | |
| ATCGAGGGTAGTGAAGAATT+GGG | + | chr7.2:52844136-52844155 | None:intergenic | 40.0% | |
| ATGCTGTTAAAAGAGAGCCA+GGG | - | chr7.2:52846029-52846048 | MS.gene010912:intron | 40.0% | |
| ATGGTATGTGTGGTTGGAAA+GGG | - | chr7.2:52845516-52845535 | MS.gene010912:CDS | 40.0% | |
| ATTCCTCTTTAGTCAGCATC+TGG | - | chr7.2:52845550-52845569 | MS.gene010912:CDS | 40.0% | |
| ATTGAGCTCTACCGTCATAA+AGG | + | chr7.2:52846268-52846287 | None:intergenic | 40.0% | |
| ATTGCTTCATAATTGGACCC+TGG | + | chr7.2:52846049-52846068 | None:intergenic | 40.0% | |
| ATTGTGCTTGAGAAAGGGAA+AGG | - | chr7.2:52844293-52844312 | MS.gene010912:CDS | 40.0% | |
| CAATGTGGTTTAGGTAGATC+AGG | - | chr7.2:52848720-52848739 | MS.gene010912:intron | 40.0% | |
| CAGAAACACACATGTACTGA+TGG | - | chr7.2:52847613-52847632 | MS.gene010912:intron | 40.0% | |
| CAGGACTGTTCTATAAACTG+TGG | - | chr7.2:52845423-52845442 | MS.gene010912:CDS | 40.0% | |
| CAGTGTGAAGAAGACTAAAG+AGG | - | chr7.2:52844220-52844239 | MS.gene010912:CDS | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | - | chr7.2:52844629-52844648 | MS.gene010912:intron | 40.0% | |
| CGATGTCGATGGTAAAGTAT+AGG | - | chr7.2:52846683-52846702 | MS.gene010912:intron | 40.0% | |
| CTGTCTTCTACAATTGCGTT+TGG | + | chr7.2:52844203-52844222 | None:intergenic | 40.0% | |
| GAAGAAGCCAAGTACATAGT+GGG | - | chr7.2:52844251-52844270 | MS.gene010912:CDS | 40.0% | |
| GAAGCAGAGATAACAGAACT+TGG | + | chr7.2:52847275-52847294 | None:intergenic | 40.0% | |
| GAATCAGCCAATGTTAAGTG+TGG | - | chr7.2:52846304-52846323 | MS.gene010912:intron | 40.0% | |
| GACACTTCTTGTGTTTGATG+AGG | - | chr7.2:52847918-52847937 | MS.gene010912:intron | 40.0% | |
| GACCTATGGTACAAAGAAGA+TGG | - | chr7.2:52847023-52847042 | MS.gene010912:intron | 40.0% | |
| GACGTTTAATATGAGGTGGA+GGG | - | chr7.2:52848578-52848597 | MS.gene010912:intron | 40.0% | |
| GAGTATTTGGATTGTAGTGG+TGG | - | chr7.2:52844344-52844363 | MS.gene010912:CDS | 40.0% | |
| GCATCCCTTAAAGTAGATGT+TGG | - | chr7.2:52844173-52844192 | MS.gene010912:CDS | 40.0% | |
| GCTGTAGAGTTAATTCAGCA+AGG | - | chr7.2:52847790-52847809 | MS.gene010912:intron | 40.0% | |
| GGATGTCATAAGAATGGTTG+AGG | - | chr7.2:52846651-52846670 | MS.gene010912:intron | 40.0% | |
| GTAGGAAAGAGAGATAGAAG+GGG | - | chr7.2:52845299-52845318 | MS.gene010912:intron | 40.0% | |
| GTATAGAACTTTCTCCGTTG+GGG | + | chr7.2:52846891-52846910 | None:intergenic | 40.0% | |
| GTATGTGAAGCCCTTTATGA+CGG | - | chr7.2:52846254-52846273 | MS.gene010912:intron | 40.0% | |
| GTCATAAGAATGGTTGAGGA+AGG | - | chr7.2:52846655-52846674 | MS.gene010912:intron | 40.0% | |
| GTCTGCATCTGATTGAATTC+TGG | - | chr7.2:52846630-52846649 | MS.gene010912:intron | 40.0% | |
| GTGCTCCAACATCTACTTTA+AGG | + | chr7.2:52844181-52844200 | None:intergenic | 40.0% | |
| GTGGTAGAAAAGAGAAAGAG+AGG | - | chr7.2:52845365-52845384 | MS.gene010912:CDS | 40.0% | |
| GTGTAGGAAAGAGAGATAGA+AGG | - | chr7.2:52845297-52845316 | MS.gene010912:intron | 40.0% | |
| GTTGTTTGCAGAAATGTGGT+GGG | + | chr7.2:52844051-52844070 | None:intergenic | 40.0% | |
| GTTTGCTCTACAGTGAAACT+TGG | - | chr7.2:52845826-52845845 | MS.gene010912:intron | 40.0% | |
| TACTGGCATATGTGTACAAC+CGG | + | chr7.2:52847967-52847986 | None:intergenic | 40.0% | |
| TAGACTTGAGTGATCGAACA+TGG | - | chr7.2:52845736-52845755 | MS.gene010912:CDS | 40.0% | |
| TAGAGTTGTACATCCGCATA+TGG | - | chr7.2:52846361-52846380 | MS.gene010912:intron | 40.0% | |
| TATAGCAGAAGCGACTTTCT+CGG | + | chr7.2:52848844-52848863 | None:intergenic | 40.0% | |
| TCAAATTGAGATGACCCCAA+CGG | - | chr7.2:52846874-52846893 | MS.gene010912:intron | 40.0% | |
| TCAGTAATGGTATGTGTGGT+TGG | - | chr7.2:52845510-52845529 | MS.gene010912:CDS | 40.0% | |
| TGAAGAAGCCAAGTACATAG+TGG | - | chr7.2:52844250-52844269 | MS.gene010912:CDS | 40.0% | |
| TGATGCTCCACACTTAACAT+TGG | + | chr7.2:52846314-52846333 | None:intergenic | 40.0% | |
| TGGTACAAAGAAGATGGAAG+GGG | - | chr7.2:52847029-52847048 | MS.gene010912:intron | 40.0% | |
| TGTAGAGTATGGAAATGCAC+CGG | - | chr7.2:52847765-52847784 | MS.gene010912:intron | 40.0% | |
| TGTATATTCCTCCTTCTCCT+TGG | + | chr7.2:52847846-52847865 | None:intergenic | 40.0% | |
| TTCCCTTTCTCAAGCACAAT+CGG | + | chr7.2:52844293-52844312 | None:intergenic | 40.0% | |
| TTGAGCTCTACCGTCATAAA+GGG | + | chr7.2:52846267-52846286 | None:intergenic | 40.0% | |
| TTTGCGTATGTAACCAAAGC+AGG | - | chr7.2:52848043-52848062 | MS.gene010912:intron | 40.0% | |
| ! | AGGTAGTGAAGTAGGTGTTT+TGG | - | chr7.2:52846703-52846722 | MS.gene010912:intron | 40.0% |
| ! | ATGTTACCGGCTATAAAGCA+CGG | + | chr7.2:52844884-52844903 | None:intergenic | 40.0% |
| ! | GCATTTAATGTGGTTTGCAG+AGG | - | chr7.2:52846490-52846509 | MS.gene010912:intron | 40.0% |
| ! | TCAATGTCAGTTTCGAGTGT+CGG | + | chr7.2:52844694-52844713 | None:intergenic | 40.0% |
| ! | TGGCAAGTGTCATTATATCG+GGG | + | chr7.2:52848779-52848798 | None:intergenic | 40.0% |
| ! | TGTTGTTTGCAGAAATGTGG+TGG | + | chr7.2:52844052-52844071 | None:intergenic | 40.0% |
| !! | ACATAGTGGGTACTTATGCA+AGG | - | chr7.2:52844264-52844283 | MS.gene010912:CDS | 40.0% |
| !! | CATAGTGGGTACTTATGCAA+GGG | - | chr7.2:52844265-52844284 | MS.gene010912:CDS | 40.0% |
| !! | CGGACTGATTTGTTTCATGA+AGG | - | chr7.2:52846599-52846618 | MS.gene010912:intron | 40.0% |
| !! | GAAATGGGTGAGTTTGTTGT+TGG | + | chr7.2:52844084-52844103 | None:intergenic | 40.0% |
| !! | TCGAACATGGTTCTAACTGT+TGG | - | chr7.2:52845749-52845768 | MS.gene010912:CDS | 40.0% |
| AAACCGTGTCTCTGTTCACA+TGG | - | chr7.2:52846385-52846404 | MS.gene010912:intron | 45.0% | |
| AGGATTTCTTTGGGCTCATG+AGG | - | chr7.2:52848740-52848759 | MS.gene010912:intron | 45.0% | |
| ATTCCTCCTTCTCCTTGGAT+AGG | + | chr7.2:52847841-52847860 | None:intergenic | 45.0% | |
| CATCCATGTGAACAGAGACA+CGG | + | chr7.2:52846391-52846410 | None:intergenic | 45.0% | |
| CCAAAGCAGGCATACAACAA+AGG | - | chr7.2:52848056-52848075 | MS.gene010912:intron | 45.0% | |
| CCAGGCATAACAGGTTCAAA+AGG | + | chr7.2:52847736-52847755 | None:intergenic | 45.0% | |
| CGACATGTGAAAGAGATTCG+TGG | - | chr7.2:52849023-52849042 | MS.gene010912:CDS | 45.0% | |
| GACCGGTAACTTATGAAGCA+TGG | - | chr7.2:52844722-52844741 | MS.gene010912:intron | 45.0% | |
| GAGATCTCTCACAACTCTAG+TGG | - | chr7.2:52845268-52845287 | MS.gene010912:intron | 45.0% | |
| GAGCATCAGAGATTCATTGC+AGG | - | chr7.2:52846326-52846345 | MS.gene010912:intron | 45.0% | |
| GATCGAGGGTAGTGAAGAAT+TGG | + | chr7.2:52844137-52844156 | None:intergenic | 45.0% | |
| GATCTCTCACAACTCTAGTG+GGG | - | chr7.2:52845270-52845289 | MS.gene010912:intron | 45.0% | |
| GATGCTGTTAAAAGAGAGCC+AGG | - | chr7.2:52846028-52846047 | MS.gene010912:intron | 45.0% | |
| GCATGGATATGGACACTACA+CGG | - | chr7.2:52844739-52844758 | MS.gene010912:intron | 45.0% | |
| GCTGTTAATGCACTTGGTCA+TGG | - | chr7.2:52844371-52844390 | MS.gene010912:CDS | 45.0% | |
| GGACGTTTAATATGAGGTGG+AGG | - | chr7.2:52848577-52848596 | MS.gene010912:intron | 45.0% | |
| GGAGTGACCTTTGTAGAGTA+TGG | - | chr7.2:52847754-52847773 | MS.gene010912:intron | 45.0% | |
| GTAGAACCTATCCAAGGAGA+AGG | - | chr7.2:52847832-52847851 | MS.gene010912:intron | 45.0% | |
| GTAGATGCTTGCCGAAATTC+TGG | - | chr7.2:52849095-52849114 | MS.gene010912:CDS | 45.0% | |
| GTGAAAGAGATTCGTGGTGT+GGG | - | chr7.2:52849029-52849048 | MS.gene010912:CDS | 45.0% | |
| TACTCTACAAAGGTCACTCC+AGG | + | chr7.2:52847754-52847773 | None:intergenic | 45.0% | |
| TATAAAGCACGGACACTCCT+CGG | + | chr7.2:52844873-52844892 | None:intergenic | 45.0% | |
| TCGAGGGTAGTGAAGAATTG+GGG | + | chr7.2:52844135-52844154 | None:intergenic | 45.0% | |
| TGAAAGAGATTCGTGGTGTG+GGG | - | chr7.2:52849030-52849049 | MS.gene010912:CDS | 45.0% | |
| TGAATTAACTCTACAGCGGC+CGG | + | chr7.2:52847787-52847806 | None:intergenic | 45.0% | |
| TGTGAAAGAGATTCGTGGTG+TGG | - | chr7.2:52849028-52849047 | MS.gene010912:CDS | 45.0% | |
| TTCCAGCTGTCAATACGAGA+AGG | + | chr7.2:52849121-52849140 | None:intergenic | 45.0% | |
| TTGAGCTTAGCTCAGTTGGT+AGG | - | chr7.2:52844599-52844618 | MS.gene010912:intron | 45.0% | |
| TTGGTCATGGCGATGATGAT+TGG | - | chr7.2:52844384-52844403 | MS.gene010912:CDS | 45.0% | |
| TTTCGGCAAGCATCTACCAA+TGG | + | chr7.2:52849092-52849111 | None:intergenic | 45.0% | |
| ! | AATTTTCCCCTGTCCACATG+CGG | - | chr7.2:52846832-52846851 | MS.gene010912:intron | 45.0% |
| ! | ACACCAGATGCTGACTAAAG+AGG | + | chr7.2:52845556-52845575 | None:intergenic | 45.0% |
| ! | AGCATCTACCAATGGTGTTG+CGG | + | chr7.2:52849084-52849103 | None:intergenic | 45.0% |
| ! | CACCGATTGTGCTTGAGAAA+GGG | - | chr7.2:52844288-52844307 | MS.gene010912:CDS | 45.0% |
| ! | CCTTTGTTGTATGCCTGCTT+TGG | + | chr7.2:52848059-52848078 | None:intergenic | 45.0% |
| ! | CCTTTTGAACCTGTTATGCC+TGG | - | chr7.2:52847733-52847752 | MS.gene010912:intron | 45.0% |
| ! | CTCGTATTGACAGCTGGAAA+AGG | - | chr7.2:52849122-52849141 | MS.gene010912:CDS | 45.0% |
| ! | GGGATTGCTGTTAATGCACT+TGG | - | chr7.2:52844365-52844384 | MS.gene010912:CDS | 45.0% |
| ! | TCTACTTTAAGGGATGCGGT+TGG | + | chr7.2:52844170-52844189 | None:intergenic | 45.0% |
| !! | CACCTGCAAAAGTACTTCCA+TGG | + | chr7.2:52848878-52848897 | None:intergenic | 45.0% |
| !! | GGAAGGTATTTCGATGTCGA+TGG | - | chr7.2:52846672-52846691 | MS.gene010912:intron | 45.0% |
| !! | GGTGTTGATGCTAATCTGCA+AGG | - | chr7.2:52845571-52845590 | MS.gene010912:CDS | 45.0% |
| !! | TGAGAATGTGATGGGTCATG+TGG | - | chr7.2:52845346-52845365 | MS.gene010912:intron | 45.0% |
| !!! | CATGGAAGTACTTTTGCAGG+TGG | - | chr7.2:52848876-52848895 | MS.gene010912:CDS | 45.0% |
| !!! | GACCATGGAAGTACTTTTGC+AGG | - | chr7.2:52848873-52848892 | MS.gene010912:CDS | 45.0% |
| !!! | TCATCCCCTTTTTTTGGTGG+TGG | + | chr7.2:52844667-52844686 | None:intergenic | 45.0% |
| AAGCGACTTTCTCGGTTACG+AGG | + | chr7.2:52848836-52848855 | None:intergenic | 50.0% | |
| AAGGTCACTCCAGGCATAAC+AGG | + | chr7.2:52847745-52847764 | None:intergenic | 50.0% | |
| ACACTTGCCAAACCTCTTGC+TGG | - | chr7.2:52848789-52848808 | MS.gene010912:intron | 50.0% | |
| CCAACTGAGCTAAGCTCAAG+AGG | + | chr7.2:52844598-52844617 | None:intergenic | 50.0% | |
| CCTCTTGAGCTTAGCTCAGT+TGG | - | chr7.2:52844595-52844614 | MS.gene010912:intron | 50.0% | |
| CGTGGTGTGGGGCTAATTAT+AGG | - | chr7.2:52849041-52849060 | MS.gene010912:CDS | 50.0% | |
| CTCGGCCACCACCAAAAAAA+GGG | - | chr7.2:52844659-52844678 | MS.gene010912:intron | 50.0% | |
| GAACCTATCCAAGGAGAAGG+AGG | - | chr7.2:52847835-52847854 | MS.gene010912:intron | 50.0% | |
| GACTTTCTCGGTTACGAGGA+CGG | + | chr7.2:52848832-52848851 | None:intergenic | 50.0% | |
| GAGACACGGTTTGCCATATG+CGG | + | chr7.2:52846377-52846396 | None:intergenic | 50.0% | |
| GAGTGTCCGTGCTTTATAGC+CGG | - | chr7.2:52844875-52844894 | MS.gene010912:intron | 50.0% | |
| TCGGCCACCACCAAAAAAAG+GGG | - | chr7.2:52844660-52844679 | MS.gene010912:intron | 50.0% | |
| TGCTTTCATGGGAGAACCCT+GGG | - | chr7.2:52847673-52847692 | MS.gene010912:intron | 50.0% | |
| TGTCAAAGCAAGTGCACCCA+GGG | + | chr7.2:52847692-52847711 | None:intergenic | 50.0% | |
| TTGCTTTCATGGGAGAACCC+TGG | - | chr7.2:52847672-52847691 | MS.gene010912:intron | 50.0% | |
| TTGTCAAAGCAAGTGCACCC+AGG | + | chr7.2:52847693-52847712 | None:intergenic | 50.0% | |
| ! | ACTTTAAGGGATGCGGTTGG+TGG | + | chr7.2:52844167-52844186 | None:intergenic | 50.0% |
| ! | CTTTAAGGGATGCGGTTGGT+GGG | + | chr7.2:52844166-52844185 | None:intergenic | 50.0% |
| ! | CTTTGGGCTCATGAGGCTTT+TGG | - | chr7.2:52848747-52848766 | MS.gene010912:intron | 50.0% |
| ! | TGCTTTTCCGCATGTGGACA+GGG | + | chr7.2:52846842-52846861 | None:intergenic | 50.0% |
| !! | GCACCGATTGTGCTTGAGAA+AGG | - | chr7.2:52844287-52844306 | MS.gene010912:CDS | 50.0% |
| AAGGTCCGGGGTTCAAACCT+CGG | - | chr7.2:52844641-52844660 | MS.gene010912:intron | 55.0% | |
| ACTCTAGTGGGGAGTGGTGT+AGG | - | chr7.2:52845281-52845300 | MS.gene010912:intron | 55.0% | |
| AGACGTGTCCGCAACACCAT+TGG | - | chr7.2:52849073-52849092 | MS.gene010912:CDS | 55.0% | |
| ATAGGTAGGCCTCCAGCAAG+AGG | + | chr7.2:52848804-52848823 | None:intergenic | 55.0% | |
| CCTCGGCCACCACCAAAAAA+AGG | - | chr7.2:52844658-52844677 | MS.gene010912:intron | 55.0% | |
| CTCACAACTCTAGTGGGGAG+TGG | - | chr7.2:52845275-52845294 | MS.gene010912:intron | 55.0% | |
| CTTGCCAAACCTCTTGCTGG+AGG | - | chr7.2:52848792-52848811 | MS.gene010912:intron | 55.0% | |
| CTTGCTGGAGGCCTACCTAT+TGG | - | chr7.2:52848804-52848823 | MS.gene010912:intron | 55.0% | |
| GACTAGGCGTGTCTCGTTGT+CGG | + | chr7.2:52844851-52844870 | None:intergenic | 55.0% | |
| GTTACGAGGACGGCTCCAAT+AGG | + | chr7.2:52848822-52848841 | None:intergenic | 55.0% | |
| TAGGCCTCCAGCAAGAGGTT+TGG | + | chr7.2:52848799-52848818 | None:intergenic | 55.0% | |
| TTGGTGGGAGCAGTGATCGA+GGG | + | chr7.2:52844151-52844170 | None:intergenic | 55.0% | |
| ! | GCTTTTCCGCATGTGGACAG+GGG | + | chr7.2:52846841-52846860 | None:intergenic | 55.0% |
| ! | GGCCTTCTCGTATTGACAGC+TGG | - | chr7.2:52849116-52849135 | MS.gene010912:CDS | 55.0% |
| !! | CTGCTTTTCCGCATGTGGAC+AGG | + | chr7.2:52846843-52846862 | None:intergenic | 55.0% |
| !! | GGTGTCTGCTTTTCCGCATG+TGG | + | chr7.2:52846848-52846867 | None:intergenic | 55.0% |
| !!! | CCTTTTTTTGGTGGTGGCCG+AGG | + | chr7.2:52844661-52844680 | None:intergenic | 55.0% |
| AACGAGACACGCCTAGTCCG+AGG | - | chr7.2:52844853-52844872 | MS.gene010912:intron | 60.0% | |
| CGAGGACGGCTCCAATAGGT+AGG | + | chr7.2:52848818-52848837 | None:intergenic | 60.0% | |
| ! | GTTGGTGGGAGCAGTGATCG+AGG | + | chr7.2:52844152-52844171 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGACT+AGG | + | chr7.2:52844867-52844886 | None:intergenic | 65.0% | |
| GGTGGCCGAGGTTTGAACCC+CGG | + | chr7.2:52844649-52844668 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 52844041 | 52849250 | 52844041 | ID=MS.gene010912 |
| chr7.2 | mRNA | 52844041 | 52849250 | 52844041 | ID=MS.gene010912.t1;Parent=MS.gene010912 |
| chr7.2 | exon | 52848816 | 52849250 | 52848816 | ID=MS.gene010912.t1.exon1;Parent=MS.gene010912.t1 |
| chr7.2 | CDS | 52848816 | 52849250 | 52848816 | ID=cds.MS.gene010912.t1;Parent=MS.gene010912.t1 |
| chr7.2 | exon | 52845352 | 52845786 | 52845352 | ID=MS.gene010912.t1.exon2;Parent=MS.gene010912.t1 |
| chr7.2 | CDS | 52845352 | 52845786 | 52845352 | ID=cds.MS.gene010912.t1;Parent=MS.gene010912.t1 |
| chr7.2 | exon | 52844041 | 52844574 | 52844041 | ID=MS.gene010912.t1.exon3;Parent=MS.gene010912.t1 |
| chr7.2 | CDS | 52844041 | 52844574 | 52844041 | ID=cds.MS.gene010912.t1;Parent=MS.gene010912.t1 |
| Gene Sequence |
| Protein sequence |
