Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08529.t1 | XP_013444558.1 | 96.3 | 438 | 16 | 0 | 33 | 470 | 115 | 552 | 1.50E-220 | 775.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08529.t1 | Q8LPG9 | 23.5 | 425 | 228 | 13 | 44 | 457 | 321 | 659 | 9.2e-09 | 63.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08529.t1 | A0A072TP08 | 96.3 | 438 | 16 | 0 | 33 | 470 | 115 | 552 | 1.1e-220 | 775.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene08529 | 0.806765 | 7.02E-50 | -1.69E-46 |
MS.gene049989 | MS.gene08529 | 0.840245 | 9.77E-58 | -1.69E-46 |
MS.gene050297 | MS.gene08529 | 0.821571 | 3.76E-53 | -1.69E-46 |
MS.gene05054 | MS.gene08529 | 0.81134 | 7.35E-51 | -1.69E-46 |
MS.gene050589 | MS.gene08529 | 0.825798 | 3.85E-54 | -1.69E-46 |
MS.gene051067 | MS.gene08529 | 0.839723 | 1.34E-57 | -1.69E-46 |
MS.gene051094 | MS.gene08529 | 0.817393 | 3.38E-52 | -1.69E-46 |
MS.gene053348 | MS.gene08529 | 0.815341 | 9.71E-52 | -1.69E-46 |
MS.gene053536 | MS.gene08529 | 0.803234 | 3.84E-49 | -1.69E-46 |
MS.gene055957 | MS.gene08529 | 0.80847 | 3.05E-50 | -1.69E-46 |
MS.gene056041 | MS.gene08529 | 0.833878 | 4.14E-56 | -1.69E-46 |
MS.gene056042 | MS.gene08529 | 0.821783 | 3.36E-53 | -1.69E-46 |
MS.gene056526 | MS.gene08529 | 0.816197 | 6.26E-52 | -1.69E-46 |
MS.gene058196 | MS.gene08529 | 0.813678 | 2.27E-51 | -1.69E-46 |
MS.gene058197 | MS.gene08529 | 0.845965 | 2.92E-59 | -1.69E-46 |
MS.gene058198 | MS.gene08529 | 0.847798 | 9.21E-60 | -1.69E-46 |
MS.gene059300 | MS.gene08529 | 0.845987 | 2.88E-59 | -1.69E-46 |
MS.gene059424 | MS.gene08529 | 0.800672 | 1.29E-48 | -1.69E-46 |
MS.gene060473 | MS.gene08529 | 0.813414 | 2.59E-51 | -1.69E-46 |
MS.gene060492 | MS.gene08529 | 0.843765 | 1.15E-58 | -1.69E-46 |
MS.gene060565 | MS.gene08529 | 0.809385 | 1.94E-50 | -1.69E-46 |
MS.gene06057 | MS.gene08529 | 0.842144 | 3.09E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08529.t1 | MTR_8g024540 | 98.932 | 468 | 5 | 0 | 3 | 470 | 85 | 552 | 0.0 | 961 |
MS.gene08529.t1 | MTR_6g033415 | 34.805 | 385 | 179 | 16 | 30 | 404 | 89 | 411 | 1.72e-36 | 139 |
MS.gene08529.t1 | MTR_1g066800 | 29.427 | 384 | 213 | 11 | 30 | 404 | 101 | 435 | 3.48e-35 | 136 |
MS.gene08529.t1 | MTR_1g066800 | 29.427 | 384 | 213 | 11 | 30 | 404 | 106 | 440 | 4.12e-35 | 136 |
MS.gene08529.t1 | MTR_7g100790 | 31.738 | 397 | 208 | 13 | 25 | 404 | 88 | 438 | 7.02e-35 | 135 |
MS.gene08529.t1 | MTR_4g050480 | 46.040 | 202 | 88 | 7 | 44 | 241 | 96 | 280 | 8.54e-35 | 135 |
MS.gene08529.t1 | MTR_4g050480 | 46.040 | 202 | 88 | 7 | 44 | 241 | 95 | 279 | 8.66e-35 | 135 |
MS.gene08529.t1 | MTR_1g095740 | 39.378 | 193 | 99 | 4 | 44 | 232 | 140 | 318 | 1.00e-33 | 133 |
MS.gene08529.t1 | MTR_4g087420 | 30.079 | 379 | 195 | 11 | 44 | 403 | 145 | 472 | 1.51e-31 | 127 |
MS.gene08529.t1 | MTR_1g007920 | 44.928 | 207 | 95 | 7 | 34 | 223 | 86 | 290 | 4.70e-29 | 119 |
MS.gene08529.t1 | MTR_1g007920 | 44.444 | 207 | 96 | 6 | 34 | 223 | 111 | 315 | 5.21e-29 | 119 |
MS.gene08529.t1 | MTR_3g104570 | 41.753 | 194 | 85 | 5 | 42 | 223 | 88 | 265 | 3.42e-27 | 114 |
MS.gene08529.t1 | MTR_0019s0070 | 30.508 | 354 | 164 | 10 | 47 | 384 | 119 | 406 | 6.00e-27 | 113 |
MS.gene08529.t1 | MTR_3g091560 | 37.083 | 240 | 111 | 4 | 32 | 251 | 99 | 318 | 8.29e-27 | 112 |
MS.gene08529.t1 | MTR_4g102840 | 30.663 | 362 | 178 | 10 | 34 | 385 | 74 | 372 | 1.15e-24 | 106 |
MS.gene08529.t1 | MTR_0047s0040 | 36.872 | 179 | 88 | 6 | 44 | 218 | 100 | 257 | 1.11e-23 | 103 |
MS.gene08529.t1 | MTR_1g101330 | 30.878 | 353 | 156 | 11 | 44 | 384 | 114 | 390 | 1.23e-22 | 100 |
MS.gene08529.t1 | MTR_1g103070 | 65.060 | 83 | 26 | 1 | 34 | 113 | 122 | 204 | 2.48e-22 | 99.8 |
MS.gene08529.t1 | MTR_2g015370 | 33.880 | 183 | 101 | 5 | 44 | 223 | 62 | 227 | 5.69e-22 | 96.3 |
MS.gene08529.t1 | MTR_8g014580 | 53.398 | 103 | 34 | 1 | 42 | 144 | 123 | 211 | 9.99e-22 | 97.4 |
MS.gene08529.t1 | MTR_8g102400 | 54.455 | 101 | 39 | 2 | 3 | 103 | 77 | 170 | 2.10e-21 | 96.7 |
MS.gene08529.t1 | MTR_8g017570 | 40.000 | 190 | 88 | 4 | 43 | 223 | 88 | 260 | 7.16e-21 | 95.1 |
MS.gene08529.t1 | MTR_7g114700 | 32.571 | 175 | 99 | 4 | 44 | 218 | 134 | 289 | 3.75e-19 | 90.1 |
MS.gene08529.t1 | MTR_7g114870 | 68.254 | 63 | 20 | 0 | 47 | 109 | 108 | 170 | 1.31e-17 | 84.7 |
MS.gene08529.t1 | MTR_8g074730 | 62.295 | 61 | 23 | 0 | 43 | 103 | 69 | 129 | 2.27e-17 | 79.3 |
MS.gene08529.t1 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 47 | 111 | 101 | 165 | 6.81e-17 | 83.6 |
MS.gene08529.t1 | MTR_2g100740 | 61.429 | 70 | 27 | 0 | 42 | 111 | 94 | 163 | 6.88e-17 | 82.4 |
MS.gene08529.t1 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 47 | 111 | 102 | 166 | 7.26e-17 | 83.6 |
MS.gene08529.t1 | MTR_1g041430 | 48.515 | 101 | 36 | 2 | 1 | 97 | 75 | 163 | 8.92e-17 | 82.8 |
MS.gene08529.t1 | MTR_2g078210 | 29.949 | 197 | 112 | 8 | 45 | 234 | 14 | 191 | 2.53e-16 | 79.0 |
MS.gene08529.t1 | MTR_2g078210 | 29.949 | 197 | 112 | 8 | 45 | 234 | 74 | 251 | 2.87e-16 | 80.1 |
MS.gene08529.t1 | MTR_2g099780 | 37.500 | 200 | 81 | 5 | 43 | 221 | 76 | 252 | 3.62e-16 | 80.9 |
MS.gene08529.t1 | MTR_1g023760 | 59.649 | 57 | 23 | 0 | 47 | 103 | 126 | 182 | 1.06e-13 | 73.9 |
MS.gene08529.t1 | MTR_3g020990 | 36.090 | 133 | 64 | 3 | 58 | 190 | 103 | 214 | 8.01e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08529.t1 | AT1G01110 | 63.288 | 444 | 116 | 16 | 41 | 470 | 117 | 527 | 2.33e-172 | 495 |
MS.gene08529.t1 | AT4G00820 | 61.053 | 475 | 142 | 16 | 7 | 470 | 92 | 534 | 7.99e-167 | 481 |
MS.gene08529.t1 | AT1G01110 | 59.446 | 397 | 114 | 16 | 88 | 470 | 1 | 364 | 2.11e-138 | 402 |
MS.gene08529.t1 | AT4G10640 | 36.458 | 480 | 169 | 15 | 5 | 470 | 66 | 423 | 3.92e-76 | 244 |
MS.gene08529.t1 | AT2G26180 | 43.902 | 205 | 87 | 4 | 37 | 229 | 76 | 264 | 5.52e-36 | 138 |
MS.gene08529.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 1.66e-32 | 129 |
MS.gene08529.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 1.66e-32 | 129 |
MS.gene08529.t1 | AT5G03040 | 30.622 | 418 | 212 | 15 | 24 | 417 | 94 | 457 | 1.66e-32 | 129 |
MS.gene08529.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.64e-31 | 125 |
MS.gene08529.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.64e-31 | 125 |
MS.gene08529.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.64e-31 | 125 |
MS.gene08529.t1 | AT3G22190 | 43.005 | 193 | 80 | 5 | 41 | 223 | 84 | 256 | 2.64e-31 | 125 |
MS.gene08529.t1 | AT3G49260 | 34.646 | 254 | 114 | 8 | 34 | 249 | 109 | 348 | 2.90e-30 | 123 |
MS.gene08529.t1 | AT3G49260 | 34.646 | 254 | 114 | 8 | 34 | 249 | 109 | 348 | 2.90e-30 | 123 |
MS.gene08529.t1 | AT3G49260 | 34.646 | 254 | 114 | 8 | 34 | 249 | 109 | 348 | 2.90e-30 | 123 |
MS.gene08529.t1 | AT1G72670 | 37.981 | 208 | 103 | 6 | 25 | 223 | 73 | 263 | 5.66e-30 | 121 |
MS.gene08529.t1 | AT3G49260 | 34.921 | 252 | 117 | 8 | 34 | 249 | 109 | 349 | 1.66e-29 | 120 |
MS.gene08529.t1 | AT3G52290 | 37.563 | 197 | 98 | 8 | 32 | 222 | 95 | 272 | 7.03e-29 | 118 |
MS.gene08529.t1 | AT3G59690 | 30.028 | 363 | 165 | 11 | 48 | 403 | 172 | 452 | 7.22e-29 | 119 |
MS.gene08529.t1 | AT3G59690 | 30.028 | 363 | 165 | 11 | 48 | 403 | 172 | 452 | 7.22e-29 | 119 |
MS.gene08529.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 322 | 660 | 4.59e-26 | 112 |
MS.gene08529.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 6.30e-26 | 111 |
MS.gene08529.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 6.30e-26 | 111 |
MS.gene08529.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 6.30e-26 | 111 |
MS.gene08529.t1 | AT2G43680 | 26.379 | 417 | 226 | 13 | 44 | 457 | 321 | 659 | 6.30e-26 | 111 |
MS.gene08529.t1 | AT3G49380 | 41.667 | 144 | 72 | 2 | 15 | 157 | 80 | 212 | 1.61e-24 | 104 |
MS.gene08529.t1 | AT4G14750 | 69.697 | 66 | 20 | 0 | 44 | 109 | 104 | 169 | 1.92e-22 | 99.4 |
MS.gene08529.t1 | AT1G17480 | 37.427 | 171 | 80 | 4 | 18 | 188 | 68 | 211 | 3.16e-22 | 98.6 |
MS.gene08529.t1 | AT4G14750 | 69.697 | 66 | 20 | 0 | 44 | 109 | 163 | 228 | 4.43e-22 | 99.0 |
MS.gene08529.t1 | AT4G14750 | 69.697 | 66 | 20 | 0 | 44 | 109 | 163 | 228 | 4.74e-22 | 99.0 |
MS.gene08529.t1 | AT3G09710 | 31.720 | 186 | 104 | 6 | 42 | 221 | 105 | 273 | 1.30e-21 | 97.4 |
MS.gene08529.t1 | AT3G09710 | 31.220 | 205 | 117 | 7 | 29 | 221 | 95 | 287 | 1.39e-21 | 97.4 |
MS.gene08529.t1 | AT5G13460 | 36.111 | 180 | 94 | 4 | 40 | 218 | 106 | 265 | 1.76e-21 | 97.1 |
MS.gene08529.t1 | AT2G26410 | 31.351 | 185 | 110 | 4 | 41 | 221 | 144 | 315 | 2.13e-21 | 97.4 |
MS.gene08529.t1 | AT2G26410 | 31.351 | 185 | 110 | 4 | 41 | 221 | 144 | 315 | 2.13e-21 | 97.4 |
MS.gene08529.t1 | AT3G16490 | 67.143 | 70 | 23 | 0 | 39 | 108 | 101 | 170 | 7.83e-20 | 91.7 |
MS.gene08529.t1 | AT4G23060 | 28.532 | 361 | 164 | 11 | 32 | 385 | 152 | 425 | 3.85e-19 | 90.5 |
MS.gene08529.t1 | AT4G29150 | 45.082 | 122 | 56 | 2 | 40 | 159 | 126 | 238 | 7.88e-19 | 88.6 |
MS.gene08529.t1 | AT5G07240 | 69.355 | 62 | 19 | 0 | 42 | 103 | 103 | 164 | 2.63e-18 | 87.0 |
MS.gene08529.t1 | AT5G07240 | 69.355 | 62 | 19 | 0 | 42 | 103 | 149 | 210 | 3.39e-18 | 87.0 |
MS.gene08529.t1 | AT5G62070 | 72.414 | 58 | 16 | 0 | 42 | 99 | 114 | 171 | 3.70e-17 | 83.6 |
MS.gene08529.t1 | AT3G51380 | 63.934 | 61 | 22 | 0 | 43 | 103 | 35 | 95 | 1.09e-16 | 75.9 |
MS.gene08529.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.75e-16 | 82.4 |
MS.gene08529.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.75e-16 | 82.4 |
MS.gene08529.t1 | AT1G18840 | 50.704 | 71 | 35 | 0 | 39 | 109 | 103 | 173 | 1.75e-16 | 82.4 |
MS.gene08529.t1 | AT1G51960 | 59.722 | 72 | 28 | 1 | 44 | 114 | 99 | 170 | 7.64e-16 | 79.3 |
MS.gene08529.t1 | AT2G33990 | 26.601 | 203 | 129 | 4 | 44 | 244 | 46 | 230 | 1.21e-15 | 77.4 |
MS.gene08529.t1 | AT1G19870 | 54.667 | 75 | 31 | 1 | 49 | 123 | 36 | 107 | 1.82e-15 | 79.3 |
MS.gene08529.t1 | AT1G19870 | 54.667 | 75 | 31 | 1 | 49 | 123 | 219 | 290 | 1.99e-15 | 79.3 |
MS.gene08529.t1 | AT3G15050 | 26.630 | 184 | 115 | 4 | 47 | 226 | 52 | 219 | 1.67e-14 | 73.9 |
MS.gene08529.t1 | AT1G74690 | 52.239 | 67 | 32 | 0 | 45 | 111 | 113 | 179 | 3.91e-14 | 75.1 |
MS.gene08529.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.65e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.65e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 47.761 | 67 | 35 | 0 | 45 | 111 | 94 | 160 | 1.65e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 49.231 | 65 | 33 | 0 | 47 | 111 | 96 | 160 | 1.76e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 49.231 | 65 | 33 | 0 | 47 | 111 | 96 | 160 | 1.76e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 49.231 | 65 | 33 | 0 | 47 | 111 | 96 | 160 | 1.76e-13 | 73.2 |
MS.gene08529.t1 | AT1G14380 | 49.231 | 65 | 33 | 0 | 47 | 111 | 96 | 160 | 1.90e-13 | 73.2 |
Find 117 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTCTTTCAGAGGTTATT+TGG | 0.184653 | 8.3:-67919230 | MS.gene08529:intron |
GAAATTATGGACATAGTTTA+AGG | 0.213922 | 8.3:-67916883 | MS.gene08529:CDS |
TTGTTCCACCCCTACTATTT+TGG | 0.218545 | 8.3:+67917119 | None:intergenic |
ATCCATCTATCTAGCCATTT+TGG | 0.221443 | 8.3:+67917508 | None:intergenic |
TGTGGATTATATTGATAATT+TGG | 0.238180 | 8.3:+67917361 | None:intergenic |
AGTACAACAAGAAGAGTAAT+TGG | 0.281665 | 8.3:+67916802 | None:intergenic |
CAGTGACACTGCTAGTGTTT+GGG | 0.297942 | 8.3:-67918617 | MS.gene08529:CDS |
CCAACTCCTCCTACATTATA+AGG | 0.303150 | 8.3:+67916911 | None:intergenic |
GGAGTTGGTTATGGAAATTA+TGG | 0.312677 | 8.3:-67916896 | MS.gene08529:CDS |
TAGTGAGAGGTCACAATGTT+AGG | 0.313052 | 8.3:-67918753 | MS.gene08529:CDS |
AAGAGCACTTCGTGCGCTTA+AGG | 0.319760 | 8.3:-67918797 | MS.gene08529:CDS |
CTCCATAGATCACACCAAAA+TGG | 0.329388 | 8.3:-67917304 | MS.gene08529:CDS |
GGTTGTGAACGGATCCATTT+TGG | 0.332251 | 8.3:+67917290 | None:intergenic |
TACAAAACCATGGGAGAATA+GGG | 0.336323 | 8.3:-67917482 | MS.gene08529:CDS |
GAAGTAGTATTGCAGATGAT+TGG | 0.362742 | 8.3:-67918332 | MS.gene08529:CDS |
CTCATCTCAACCACCGTCTA+AGG | 0.364361 | 8.3:+67916738 | None:intergenic |
CTACAAAACCATGGGAGAAT+AGG | 0.367491 | 8.3:-67917483 | MS.gene08529:CDS |
TTTGCTCCTAGATATGAATA+AGG | 0.377417 | 8.3:+67917400 | None:intergenic |
TCAGTGACACTGCTAGTGTT+TGG | 0.380570 | 8.3:-67918618 | MS.gene08529:CDS |
TCTCAACCTTATTCATATCT+AGG | 0.385222 | 8.3:-67917406 | MS.gene08529:CDS |
GGAACTTGTACCAAAATAGT+AGG | 0.389102 | 8.3:-67917129 | MS.gene08529:CDS |
AATGTAGGAGGAGTTGGTTA+TGG | 0.413219 | 8.3:-67916905 | MS.gene08529:CDS |
TCGGTTGCTTGCATGTAATT+AGG | 0.413740 | 8.3:+67917046 | None:intergenic |
GGAGTCGATGGCCTTTGCCT+TGG | 0.415194 | 8.3:+67916989 | None:intergenic |
GAGGTTTCACCTTCGTCAAC+CGG | 0.431189 | 8.3:-67916764 | MS.gene08529:CDS |
TTCTTTCCTTTGTTGCAACA+TGG | 0.431704 | 8.3:+67918275 | None:intergenic |
CTTGACGACCGGACTTGAAT+AGG | 0.434489 | 8.3:+67917232 | None:intergenic |
CCTCTCAAACACCAAGCTTA+AGG | 0.437895 | 8.3:-67917171 | MS.gene08529:CDS |
GACCAAAATGGCTAGATAGA+TGG | 0.442192 | 8.3:-67917510 | MS.gene08529:CDS |
CCTCCTACATTATAAGGATC+AGG | 0.445401 | 8.3:+67916917 | None:intergenic |
AAGTAGTATTGCAGATGATT+GGG | 0.451725 | 8.3:-67918331 | MS.gene08529:CDS |
GGTACAAGTTCCCATTGTAA+TGG | 0.452470 | 8.3:+67917140 | None:intergenic |
TGCCTTTGTGGTTGGTGATG+TGG | 0.455595 | 8.3:+67917343 | None:intergenic |
AAACCTGTTGTGAAAATGCT+TGG | 0.456509 | 8.3:+67918223 | None:intergenic |
CCTTATAATGTAGGAGGAGT+TGG | 0.456681 | 8.3:-67916911 | MS.gene08529:CDS |
GGTCTAATTACCATTACAAT+GGG | 0.460991 | 8.3:-67917150 | MS.gene08529:CDS |
ACATTCACACTCTTGAAACT+TGG | 0.462543 | 8.3:+67916857 | None:intergenic |
CTGCTAGTGTTTGGGATTCG+CGG | 0.462678 | 8.3:-67918609 | MS.gene08529:CDS |
AGAGCACTTCGTGCGCTTAA+GGG | 0.465270 | 8.3:-67918796 | MS.gene08529:CDS |
GTGAAGTAGACCTTATCCTT+TGG | 0.466662 | 8.3:+67918665 | None:intergenic |
ACACACAGTTGAAGAAGTTA+AGG | 0.475450 | 8.3:-67918298 | MS.gene08529:CDS |
ATTTCACAGATTTGGAGAAA+TGG | 0.475842 | 8.3:-67917574 | MS.gene08529:intron |
AATGGTAGGACATCATCAAT+TGG | 0.477140 | 8.3:-67917556 | MS.gene08529:CDS |
GGAAAGAAGCAGCAATGAAG+AGG | 0.480771 | 8.3:-67918260 | MS.gene08529:CDS |
CGCAGAGTGCGCCAAGGCAA+AGG | 0.484032 | 8.3:-67917000 | MS.gene08529:CDS |
CACAACGAGGGCTTGACGAC+CGG | 0.488125 | 8.3:+67917221 | None:intergenic |
ACATTATAAGGATCAGGAGC+AGG | 0.491564 | 8.3:+67916923 | None:intergenic |
AATGTAGCAGCATCACATTA+TGG | 0.491586 | 8.3:-67916839 | MS.gene08529:CDS |
AGTCTGCCAAGGCTCGAATT+CGG | 0.493661 | 8.3:-67917024 | MS.gene08529:CDS |
CGTCAACCGGTGACCTTAGA+CGG | 0.494779 | 8.3:-67916751 | MS.gene08529:CDS |
GAACTTGTACCAAAATAGTA+GGG | 0.496333 | 8.3:-67917128 | MS.gene08529:CDS |
GATCCGGATCAGTAAAGAAA+AGG | 0.499138 | 8.3:-67916955 | MS.gene08529:CDS |
GCTCTTCCCCTATTCTCCCA+TGG | 0.500010 | 8.3:+67917475 | None:intergenic |
ACATGCTCTTGCTGTGGCTA+TGG | 0.501053 | 8.3:-67919359 | MS.gene08529:CDS |
GATCCGGATCTATCCCTCTC+TGG | 0.503639 | 8.3:+67916968 | None:intergenic |
CTAAGAGTTCAAATCATGCT+AGG | 0.504978 | 8.3:-67919279 | MS.gene08529:CDS |
AACTTGAAGAGAGACCAAAA+TGG | 0.518980 | 8.3:-67917522 | MS.gene08529:CDS |
TGCTGGAGACGGAGTAGTGA+TGG | 0.522782 | 8.3:+67917264 | None:intergenic |
GCTCCTGATCCTTATAATGT+AGG | 0.524729 | 8.3:-67916920 | MS.gene08529:CDS |
CTATCCCTCTCTGGAGTCGA+TGG | 0.525156 | 8.3:+67916977 | None:intergenic |
CCTTAAGCTTGGTGTTTGAG+AGG | 0.526162 | 8.3:+67917171 | None:intergenic |
GAAGCAATGGAATGCCTTTG+TGG | 0.526434 | 8.3:+67917331 | None:intergenic |
AACCTGTTGTGAAAATGCTT+GGG | 0.527631 | 8.3:+67918224 | None:intergenic |
AGGTCTAATTACCATTACAA+TGG | 0.529005 | 8.3:-67917151 | MS.gene08529:CDS |
GAGTTCTTGACCAAAGGATA+AGG | 0.529710 | 8.3:-67918675 | MS.gene08529:CDS |
ATCTTCAAGACATTTCAGAT+AGG | 0.531548 | 8.3:-67918585 | MS.gene08529:CDS |
GTGATTCAAACTTCTTTCAG+AGG | 0.534914 | 8.3:-67919238 | MS.gene08529:CDS |
AGCTACTGCTCAAGCTGCTG+TGG | 0.535167 | 8.3:-67919317 | MS.gene08529:CDS |
AATTCGAGCCTTGGCAGACT+CGG | 0.539728 | 8.3:+67917027 | None:intergenic |
GAGCACTTCGTGCGCTTAAG+GGG | 0.545080 | 8.3:-67918795 | MS.gene08529:CDS |
AGCAGCATCACATTATGGAT+TGG | 0.546365 | 8.3:-67916834 | MS.gene08529:CDS |
TCTTGTTGTACTGAGAGTCT+CGG | 0.552055 | 8.3:-67916791 | MS.gene08529:CDS |
AGCTTGGTGTTTGAGAGGTG+TGG | 0.552600 | 8.3:+67917176 | None:intergenic |
TTAACTTCTTCAACTGTGTG+TGG | 0.553478 | 8.3:+67918300 | None:intergenic |
AATCAAGACCTATTCAAGTC+CGG | 0.556812 | 8.3:-67917240 | MS.gene08529:CDS |
TACTGAGAGTCTCGGTGGCG+AGG | 0.556933 | 8.3:-67916783 | MS.gene08529:CDS |
ACTCCAGAGAGGGATAGATC+CGG | 0.559569 | 8.3:-67916971 | MS.gene08529:CDS |
GAAAGAAGCAGCAATGAAGA+GGG | 0.561558 | 8.3:-67918259 | MS.gene08529:CDS |
AGTAGGGGTGGAACAAGTAA+TGG | 0.561747 | 8.3:-67917112 | MS.gene08529:CDS |
TTAAGGCCATGTTGCAACAA+AGG | 0.561941 | 8.3:-67918281 | MS.gene08529:CDS |
CTGCGACCGAATTCGAGCCT+TGG | 0.565424 | 8.3:+67917018 | None:intergenic |
CACAGATTTGGAGAAATGGT+AGG | 0.567014 | 8.3:-67917570 | MS.gene08529:intron |
TCTATGGAGCGGTGAAGCAA+TGG | 0.570311 | 8.3:+67917318 | None:intergenic |
CAATGGAATGCCTTTGTGGT+TGG | 0.576689 | 8.3:+67917335 | None:intergenic |
GAGACGGAGTAGTGATGGAT+TGG | 0.577607 | 8.3:+67917269 | None:intergenic |
TGGTAATTAGACCTTAAGCT+TGG | 0.583935 | 8.3:+67917160 | None:intergenic |
CCTGATCCTTATAATGTAGG+AGG | 0.585582 | 8.3:-67916917 | MS.gene08529:CDS |
TGTGGCTATGGCTACAGCTG+AGG | 0.587150 | 8.3:-67919347 | MS.gene08529:CDS |
AAGCTGCTGTGGAAGTTGCA+AGG | 0.590980 | 8.3:-67919306 | MS.gene08529:CDS |
CAACCGGTGACCTTAGACGG+TGG | 0.593652 | 8.3:-67916748 | MS.gene08529:CDS |
TAAGAGTTCAAATCATGCTA+GGG | 0.594458 | 8.3:-67919278 | MS.gene08529:CDS |
AAGTTGCAAGCTTTAGTGAG+AGG | 0.597297 | 8.3:-67918766 | MS.gene08529:CDS |
TTGTACCAAAATAGTAGGGG+TGG | 0.602042 | 8.3:-67917124 | MS.gene08529:CDS |
ATAAGGTCTACTTCACATGA+AGG | 0.602228 | 8.3:-67918658 | MS.gene08529:CDS |
TTGGTGTTTGAGAGGTGTGG+TGG | 0.605794 | 8.3:+67917179 | None:intergenic |
CAACCACCGTCTAAGGTCAC+CGG | 0.606102 | 8.3:+67916745 | None:intergenic |
GCAAGCAACCGAGTCTGCCA+AGG | 0.614885 | 8.3:-67917035 | MS.gene08529:CDS |
CATTATAAGGATCAGGAGCA+GGG | 0.621699 | 8.3:+67916924 | None:intergenic |
ATGGATGGCTACAAAACCAT+GGG | 0.623432 | 8.3:-67917491 | MS.gene08529:CDS |
AAGCAAGAGTTCTTGACCAA+AGG | 0.630951 | 8.3:-67918681 | MS.gene08529:CDS |
AGCAAGCAAAGATGACACTT+AGG | 0.631862 | 8.3:-67918729 | MS.gene08529:CDS |
GATGGATGGCTACAAAACCA+TGG | 0.632158 | 8.3:-67917492 | MS.gene08529:CDS |
AAAATGGCTAGATAGATGGA+TGG | 0.637956 | 8.3:-67917506 | MS.gene08529:CDS |
TTCGGTCGCAGAGTGCGCCA+AGG | 0.638278 | 8.3:-67917006 | MS.gene08529:CDS |
AACACTAGCAGTGTCACTGA+AGG | 0.639670 | 8.3:+67918621 | None:intergenic |
AAGAGACTCTATTAAGACTG+TGG | 0.640275 | 8.3:-67917440 | MS.gene08529:CDS |
AAGGCCATCGACTCCAGAGA+GGG | 0.644870 | 8.3:-67916981 | MS.gene08529:CDS |
CTAAGGTCACCGGTTGACGA+AGG | 0.652413 | 8.3:+67916755 | None:intergenic |
AGTGATGGATTGGTTGTGAA+CGG | 0.660603 | 8.3:+67917279 | None:intergenic |
CTATCTTCTCGAACACAACG+AGG | 0.664998 | 8.3:+67917208 | None:intergenic |
TATCTTCTCGAACACAACGA+GGG | 0.667052 | 8.3:+67917209 | None:intergenic |
ACAAAACCATGGGAGAATAG+GGG | 0.672684 | 8.3:-67917481 | MS.gene08529:CDS |
ATCCACATCACCAACCACAA+AGG | 0.673182 | 8.3:-67917345 | MS.gene08529:CDS |
AACTTGTACCAAAATAGTAG+GGG | 0.675624 | 8.3:-67917127 | MS.gene08529:CDS |
TGAGAAACATGCTCTTGCTG+TGG | 0.692861 | 8.3:-67919365 | MS.gene08529:CDS |
TGTTGTACTGAGAGTCTCGG+TGG | 0.693541 | 8.3:-67916788 | MS.gene08529:CDS |
AAAGGCCATCGACTCCAGAG+AGG | 0.711647 | 8.3:-67916982 | MS.gene08529:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAGAACTTTTTAATTATTT+TGG | - | chr8.3:67918092-67918111 | MS.gene08529:intron | 10.0% |
!! | AATTAGAATGTAAAAACAAA+AGG | + | chr8.3:67916923-67916942 | None:intergenic | 15.0% |
!! | ATTAGAATGTAAAAACAAAA+GGG | + | chr8.3:67916922-67916941 | None:intergenic | 15.0% |
!!! | AGAATTGATTTTGAATTTTT+TGG | - | chr8.3:67918528-67918547 | MS.gene08529:intron | 15.0% |
!!! | TGTGGATTATATTGATAATT+TGG | + | chr8.3:67919152-67919171 | None:intergenic | 20.0% |
!!! | TGTTTTTACATTCTAATTCA+TGG | - | chr8.3:67916925-67916944 | MS.gene08529:CDS | 20.0% |
! | AAAGATAGTGAAAAAAGAAG+TGG | - | chr8.3:67916802-67916821 | MS.gene08529:CDS | 25.0% |
! | AAATTCGATTACAATGATGT+TGG | + | chr8.3:67917991-67918010 | None:intergenic | 25.0% |
! | AAGAAAATAAAGCGAAAAAG+AGG | + | chr8.3:67918322-67918341 | None:intergenic | 25.0% |
! | AGAAAATAAAGCGAAAAAGA+GGG | + | chr8.3:67918321-67918340 | None:intergenic | 25.0% |
! | ATAACACAAACTTCTTATCA+AGG | + | chr8.3:67917631-67917650 | None:intergenic | 25.0% |
! | ATTAGCTAAGAAAATTGCTT+TGG | + | chr8.3:67918905-67918924 | None:intergenic | 25.0% |
! | ATTTGACAATTTCACAGATT+TGG | - | chr8.3:67918928-67918947 | MS.gene08529:intron | 25.0% |
! | CTTTATGTTTGAGAATATCA+TGG | - | chr8.3:67917408-67917427 | MS.gene08529:CDS | 25.0% |
! | GAAATTATGGACATAGTTTA+AGG | - | chr8.3:67919627-67919646 | MS.gene08529:intron | 25.0% |
! | TCTAACTTGAAACTAGAATA+TGG | - | chr8.3:67918712-67918731 | MS.gene08529:CDS | 25.0% |
! | TGTAGAAAAGAGAAAAAAGA+AGG | - | chr8.3:67917003-67917022 | MS.gene08529:CDS | 25.0% |
!! | AAGCAATTTTCTTAGCTAAT+TGG | - | chr8.3:67918905-67918924 | MS.gene08529:intron | 25.0% |
!! | AATATTTGCTTCTAAAAGCA+TGG | + | chr8.3:67918029-67918048 | None:intergenic | 25.0% |
!! | AGGAAAAATCTACATTTTGA+AGG | - | chr8.3:67918391-67918410 | MS.gene08529:intron | 25.0% |
!! | ATTTTTCCTCATAGTGATTT+TGG | + | chr8.3:67918380-67918399 | None:intergenic | 25.0% |
!!! | AAAAAAGAAGGTGGATTTTT+AGG | - | chr8.3:67917015-67917034 | MS.gene08529:CDS | 25.0% |
!!! | ATATTCAACTCACTTTTACA+TGG | - | chr8.3:67918773-67918792 | MS.gene08529:CDS | 25.0% |
!!! | CTTTTTTCACTATCTTTTGT+TGG | + | chr8.3:67916799-67916818 | None:intergenic | 25.0% |
!!! | TATTTTGGTGTTCTGTTTAT+AGG | - | chr8.3:67918107-67918126 | MS.gene08529:intron | 25.0% |
!!! | TTGCAAACAAAAGTACTTTT+TGG | - | chr8.3:67918053-67918072 | MS.gene08529:intron | 25.0% |
AACAACATCATGCTTCAATT+TGG | + | chr8.3:67917090-67917109 | None:intergenic | 30.0% | |
AACTTCTTTCAGAGGTTATT+TGG | - | chr8.3:67917280-67917299 | MS.gene08529:CDS | 30.0% | |
AACTTGTACCAAAATAGTAG+GGG | - | chr8.3:67919383-67919402 | MS.gene08529:intron | 30.0% | |
AAGTAGTATTGCAGATGATT+GGG | - | chr8.3:67918179-67918198 | MS.gene08529:intron | 30.0% | |
AGAAAAGAGAAAAAAGAAGG+TGG | - | chr8.3:67917006-67917025 | MS.gene08529:CDS | 30.0% | |
AGGTCTAATTACCATTACAA+TGG | - | chr8.3:67919359-67919378 | MS.gene08529:CDS | 30.0% | |
AGTACAACAAGAAGAGTAAT+TGG | + | chr8.3:67919711-67919730 | None:intergenic | 30.0% | |
ATCTTCAAGACATTTCAGAT+AGG | - | chr8.3:67917925-67917944 | MS.gene08529:intron | 30.0% | |
ATTTCACAGATTTGGAGAAA+TGG | - | chr8.3:67918936-67918955 | MS.gene08529:intron | 30.0% | |
ATTTGGCAAAAACTACACTT+TGG | - | chr8.3:67917557-67917576 | MS.gene08529:CDS | 30.0% | |
GAACTTGTACCAAAATAGTA+GGG | - | chr8.3:67919382-67919401 | MS.gene08529:intron | 30.0% | |
GATACCAAAAATCATTGTTG+AGG | + | chr8.3:67918746-67918765 | None:intergenic | 30.0% | |
GGTCTAATTACCATTACAAT+GGG | - | chr8.3:67919360-67919379 | MS.gene08529:CDS | 30.0% | |
TAAGAGTTCAAATCATGCTA+GGG | - | chr8.3:67917232-67917251 | MS.gene08529:CDS | 30.0% | |
TCAAGAAGAAGATGAAGAAA+AGG | - | chr8.3:67916846-67916865 | MS.gene08529:CDS | 30.0% | |
TCTCAACCTTATTCATATCT+AGG | - | chr8.3:67919104-67919123 | MS.gene08529:intron | 30.0% | |
TTCAATGTAATCACTAGTGT+CGG | + | chr8.3:67918602-67918621 | None:intergenic | 30.0% | |
TTGACAAAATCACATTGACA+CGG | + | chr8.3:67917599-67917618 | None:intergenic | 30.0% | |
TTTGCTCCTAGATATGAATA+AGG | + | chr8.3:67919113-67919132 | None:intergenic | 30.0% | |
! | AATCTTTTGTGTGGTTGTTT+TGG | - | chr8.3:67918142-67918161 | MS.gene08529:intron | 30.0% |
! | ACAGATCTAATTGCATGTTT+TGG | - | chr8.3:67917315-67917334 | MS.gene08529:CDS | 30.0% |
! | ATGTGTTTGAATCTTTTGTG+TGG | - | chr8.3:67918133-67918152 | MS.gene08529:intron | 30.0% |
! | TTGTTCTAAGTCTGCATATT+TGG | - | chr8.3:67918340-67918359 | MS.gene08529:CDS | 30.0% |
! | TTTGCCTCAACAATGATTTT+TGG | - | chr8.3:67918739-67918758 | MS.gene08529:CDS | 30.0% |
!! | AAGAAAATTGCTTTGGTGTT+TGG | + | chr8.3:67918898-67918917 | None:intergenic | 30.0% |
!!! | AAAGTACCTTTTTTCTCTCT+TGG | - | chr8.3:67917661-67917680 | MS.gene08529:intron | 30.0% |
!!! | CTTTTTGGTTAGAAAAGCAA+AGG | - | chr8.3:67918068-67918087 | MS.gene08529:intron | 30.0% |
!!! | GAATTTTTTGGATCTTCTCA+AGG | - | chr8.3:67918540-67918559 | MS.gene08529:intron | 30.0% |
AAAATGGCTAGATAGATGGA+TGG | - | chr8.3:67919004-67919023 | MS.gene08529:intron | 35.0% | |
AAACCTGTTGTGAAAATGCT+TGG | + | chr8.3:67918290-67918309 | None:intergenic | 35.0% | |
AACCTGTTGTGAAAATGCTT+GGG | + | chr8.3:67918289-67918308 | None:intergenic | 35.0% | |
AACTTGAAGAGAGACCAAAA+TGG | - | chr8.3:67918988-67919007 | MS.gene08529:intron | 35.0% | |
AAGAGACTCTATTAAGACTG+TGG | - | chr8.3:67919070-67919089 | MS.gene08529:intron | 35.0% | |
AAGTTAGAACCTATGAAGCA+CGG | + | chr8.3:67918700-67918719 | None:intergenic | 35.0% | |
AATCAAGACCTATTCAAGTC+CGG | - | chr8.3:67919270-67919289 | MS.gene08529:CDS | 35.0% | |
AATGGTAGGACATCATCAAT+TGG | - | chr8.3:67918954-67918973 | MS.gene08529:intron | 35.0% | |
AATGTAGCAGCATCACATTA+TGG | - | chr8.3:67919671-67919690 | MS.gene08529:intron | 35.0% | |
ACACACAGTTGAAGAAGTTA+AGG | - | chr8.3:67918212-67918231 | MS.gene08529:intron | 35.0% | |
ACATCATGCTTCAATTTGGT+TGG | + | chr8.3:67917086-67917105 | None:intergenic | 35.0% | |
ACATTCACACTCTTGAAACT+TGG | + | chr8.3:67919656-67919675 | None:intergenic | 35.0% | |
AGTTTGCCAAAATCACTATG+AGG | - | chr8.3:67918371-67918390 | MS.gene08529:intron | 35.0% | |
ATAAGGTCTACTTCACATGA+AGG | - | chr8.3:67917852-67917871 | MS.gene08529:intron | 35.0% | |
ATGAATTGACTGTGTAACAC+TGG | + | chr8.3:67918848-67918867 | None:intergenic | 35.0% | |
CCACTAATCCAAAATCATTG+TGG | + | chr8.3:67917505-67917524 | None:intergenic | 35.0% | |
CTAAGAGTTCAAATCATGCT+AGG | - | chr8.3:67917231-67917250 | MS.gene08529:CDS | 35.0% | |
GAAGTAGTATTGCAGATGAT+TGG | - | chr8.3:67918178-67918197 | MS.gene08529:intron | 35.0% | |
GGAACTTGTACCAAAATAGT+AGG | - | chr8.3:67919381-67919400 | MS.gene08529:intron | 35.0% | |
GTGATTCAAACTTCTTTCAG+AGG | - | chr8.3:67917272-67917291 | MS.gene08529:CDS | 35.0% | |
TACAAAACCATGGGAGAATA+GGG | - | chr8.3:67919028-67919047 | MS.gene08529:intron | 35.0% | |
TCAAGGAGAATTGAGTTTGA+AGG | - | chr8.3:67918557-67918576 | MS.gene08529:intron | 35.0% | |
TGGTAATTAGACCTTAAGCT+TGG | + | chr8.3:67919353-67919372 | None:intergenic | 35.0% | |
TGTGTATGTTTGAACCTTGT+AGG | - | chr8.3:67917686-67917705 | MS.gene08529:intron | 35.0% | |
TTAACTTCTTCAACTGTGTG+TGG | + | chr8.3:67918213-67918232 | None:intergenic | 35.0% | |
TTCACTGTTTCATGATTCAC+TGG | + | chr8.3:67917044-67917063 | None:intergenic | 35.0% | |
TTCTTTCCTTTGTTGCAACA+TGG | + | chr8.3:67918238-67918257 | None:intergenic | 35.0% | |
! | AAGCCTTTTCTTTACTGATC+CGG | + | chr8.3:67919561-67919580 | None:intergenic | 35.0% |
! | ATCCATCTATCTAGCCATTT+TGG | + | chr8.3:67919005-67919024 | None:intergenic | 35.0% |
! | GGAGTTGGTTATGGAAATTA+TGG | - | chr8.3:67919614-67919633 | MS.gene08529:intron | 35.0% |
! | GTGTAGTTTTTGCCAAATCA+CGG | + | chr8.3:67917555-67917574 | None:intergenic | 35.0% |
! | TGAATAGGTCTTGATTTTGC+TGG | + | chr8.3:67919266-67919285 | None:intergenic | 35.0% |
! | TGTATGTGTGTTTCCACTTT+TGG | - | chr8.3:67918479-67918498 | MS.gene08529:intron | 35.0% |
!! | ATCCATTTTGGTGTGATCTA+TGG | + | chr8.3:67919211-67919230 | None:intergenic | 35.0% |
!! | CCACAATGATTTTGGATTAG+TGG | - | chr8.3:67917502-67917521 | MS.gene08529:CDS | 35.0% |
!!! | TTTTGGATTAGTGGTGAGTT+TGG | - | chr8.3:67917511-67917530 | MS.gene08529:CDS | 35.0% |
AAGCAAGAGTTCTTGACCAA+AGG | - | chr8.3:67917829-67917848 | MS.gene08529:intron | 40.0% | |
ACAAAACCATGGGAGAATAG+GGG | - | chr8.3:67919029-67919048 | MS.gene08529:intron | 40.0% | |
ACATTATAAGGATCAGGAGC+AGG | + | chr8.3:67919590-67919609 | None:intergenic | 40.0% | |
AGCAAGCAAAGATGACACTT+AGG | - | chr8.3:67917781-67917800 | MS.gene08529:intron | 40.0% | |
AGCAGCATCACATTATGGAT+TGG | - | chr8.3:67919676-67919695 | MS.gene08529:intron | 40.0% | |
ATGGATGGCTACAAAACCAT+GGG | - | chr8.3:67919019-67919038 | MS.gene08529:intron | 40.0% | |
CAATTTCACTCCTCCAAAAG+TGG | + | chr8.3:67918495-67918514 | None:intergenic | 40.0% | |
CACAATGTTCAACCGTGATT+TGG | - | chr8.3:67917540-67917559 | MS.gene08529:CDS | 40.0% | |
CACACACCAAGAGAGAAAAA+AGG | + | chr8.3:67917670-67917689 | None:intergenic | 40.0% | |
CACAGATTTGGAGAAATGGT+AGG | - | chr8.3:67918940-67918959 | MS.gene08529:intron | 40.0% | |
CATTATAAGGATCAGGAGCA+GGG | + | chr8.3:67919589-67919608 | None:intergenic | 40.0% | |
CCAACTCCTCCTACATTATA+AGG | + | chr8.3:67919602-67919621 | None:intergenic | 40.0% | |
CCTCCTACATTATAAGGATC+AGG | + | chr8.3:67919596-67919615 | None:intergenic | 40.0% | |
CCTGATCCTTATAATGTAGG+AGG | - | chr8.3:67919593-67919612 | MS.gene08529:intron | 40.0% | |
CCTTATAATGTAGGAGGAGT+TGG | - | chr8.3:67919599-67919618 | MS.gene08529:intron | 40.0% | |
CTACAAAACCATGGGAGAAT+AGG | - | chr8.3:67919027-67919046 | MS.gene08529:intron | 40.0% | |
CTCCATAGATCACACCAAAA+TGG | - | chr8.3:67919206-67919225 | MS.gene08529:intron | 40.0% | |
GAAAGAAGCAGCAATGAAGA+GGG | - | chr8.3:67918251-67918270 | MS.gene08529:CDS | 40.0% | |
GACCAAAATGGCTAGATAGA+TGG | - | chr8.3:67919000-67919019 | MS.gene08529:intron | 40.0% | |
GAGTTCTTGACCAAAGGATA+AGG | - | chr8.3:67917835-67917854 | MS.gene08529:intron | 40.0% | |
GATCCGGATCAGTAAAGAAA+AGG | - | chr8.3:67919555-67919574 | MS.gene08529:intron | 40.0% | |
GCTCCTGATCCTTATAATGT+AGG | - | chr8.3:67919590-67919609 | MS.gene08529:intron | 40.0% | |
GGAAGAAAGGTAGTAGTTCA+TGG | - | chr8.3:67916743-67916762 | MS.gene08529:CDS | 40.0% | |
GGTACAAGTTCCCATTGTAA+TGG | + | chr8.3:67919373-67919392 | None:intergenic | 40.0% | |
GTGAAGTAGACCTTATCCTT+TGG | + | chr8.3:67917848-67917867 | None:intergenic | 40.0% | |
TAGTGAGAGGTCACAATGTT+AGG | - | chr8.3:67917757-67917776 | MS.gene08529:intron | 40.0% | |
TATCTTCTCGAACACAACGA+GGG | + | chr8.3:67919304-67919323 | None:intergenic | 40.0% | |
TCCAAAATCATTGTGGCCAT+TGG | + | chr8.3:67917498-67917517 | None:intergenic | 40.0% | |
TCGGTTGCTTGCATGTAATT+AGG | + | chr8.3:67919467-67919486 | None:intergenic | 40.0% | |
TTAAGGCCATGTTGCAACAA+AGG | - | chr8.3:67918229-67918248 | MS.gene08529:CDS | 40.0% | |
TTGTACCAAAATAGTAGGGG+TGG | - | chr8.3:67919386-67919405 | MS.gene08529:intron | 40.0% | |
! | AAGTTGCAAGCTTTAGTGAG+AGG | - | chr8.3:67917744-67917763 | MS.gene08529:intron | 40.0% |
! | AATGTAGGAGGAGTTGGTTA+TGG | - | chr8.3:67919605-67919624 | MS.gene08529:intron | 40.0% |
! | TCTTGTTGTACTGAGAGTCT+CGG | - | chr8.3:67919719-67919738 | MS.gene08529:intron | 40.0% |
! | TTGTTCCACCCCTACTATTT+TGG | + | chr8.3:67919394-67919413 | None:intergenic | 40.0% |
!! | AGTGATGGATTGGTTGTGAA+CGG | + | chr8.3:67919234-67919253 | None:intergenic | 40.0% |
!! | ATGTGTGTTTCCACTTTTGG+AGG | - | chr8.3:67918482-67918501 | MS.gene08529:intron | 40.0% |
!! | TTTTGGTGTGATCTATGGAG+CGG | + | chr8.3:67919206-67919225 | None:intergenic | 40.0% |
!!! | TTGTTTTGGCAGTCAAGAGA+AGG | - | chr8.3:67918156-67918175 | MS.gene08529:intron | 40.0% |
AAATCATTGTGGCCATTGGC+AGG | + | chr8.3:67917494-67917513 | None:intergenic | 45.0% | |
AAGTGCTCTTCTTGCCTACA+AGG | + | chr8.3:67917703-67917722 | None:intergenic | 45.0% | |
AGTAGGGGTGGAACAAGTAA+TGG | - | chr8.3:67919398-67919417 | MS.gene08529:intron | 45.0% | |
AGTCATTGTGATCCTGCCAA+TGG | - | chr8.3:67917479-67917498 | MS.gene08529:CDS | 45.0% | |
ATCCACATCACCAACCACAA+AGG | - | chr8.3:67919165-67919184 | MS.gene08529:intron | 45.0% | |
CAATGGAATGCCTTTGTGGT+TGG | + | chr8.3:67919178-67919197 | None:intergenic | 45.0% | |
CAGTGACACTGCTAGTGTTT+GGG | - | chr8.3:67917893-67917912 | MS.gene08529:intron | 45.0% | |
CCTCTCAAACACCAAGCTTA+AGG | - | chr8.3:67919339-67919358 | MS.gene08529:CDS | 45.0% | |
CGATGAGTTCGACAAAGTCT+AGG | + | chr8.3:67918435-67918454 | None:intergenic | 45.0% | |
CTATCTTCTCGAACACAACG+AGG | + | chr8.3:67919305-67919324 | None:intergenic | 45.0% | |
CTGCGAGTTTGACGAAATCA+CGG | - | chr8.3:67917343-67917362 | MS.gene08529:CDS | 45.0% | |
CTGCTACAAGTGTGACTTCA+AGG | - | chr8.3:67917111-67917130 | MS.gene08529:CDS | 45.0% | |
GAAGCAATGGAATGCCTTTG+TGG | + | chr8.3:67919182-67919201 | None:intergenic | 45.0% | |
GATGGATGGCTACAAAACCA+TGG | - | chr8.3:67919018-67919037 | MS.gene08529:intron | 45.0% | |
GGAAAGAAGCAGCAATGAAG+AGG | - | chr8.3:67918250-67918269 | MS.gene08529:CDS | 45.0% | |
TATCTGTGTCCGTGCTTCAT+AGG | - | chr8.3:67918688-67918707 | MS.gene08529:CDS | 45.0% | |
TCAGTGACACTGCTAGTGTT+TGG | - | chr8.3:67917892-67917911 | MS.gene08529:intron | 45.0% | |
TGAGAAACATGCTCTTGCTG+TGG | - | chr8.3:67917145-67917164 | MS.gene08529:CDS | 45.0% | |
TGTGACTTCAAGGACAGATC+AGG | - | chr8.3:67917121-67917140 | MS.gene08529:CDS | 45.0% | |
! | AACACTAGCAGTGTCACTGA+AGG | + | chr8.3:67917892-67917911 | None:intergenic | 45.0% |
! | GCCAATGGCCACAATGATTT+TGG | - | chr8.3:67917494-67917513 | MS.gene08529:CDS | 45.0% |
! | GGTCTTGATTTTGCTGGAGA+CGG | + | chr8.3:67919260-67919279 | None:intergenic | 45.0% |
! | GGTTGTGAACGGATCCATTT+TGG | + | chr8.3:67919223-67919242 | None:intergenic | 45.0% |
! | GTCCCAAGCATTTTCACAAC+AGG | - | chr8.3:67918284-67918303 | MS.gene08529:CDS | 45.0% |
!! | CCTTAAGCTTGGTGTTTGAG+AGG | + | chr8.3:67919342-67919361 | None:intergenic | 45.0% |
!! | GTAATCACTAGTGTCGGTGT+CGG | + | chr8.3:67918596-67918615 | None:intergenic | 45.0% |
AAGCTGCTGTGGAAGTTGCA+AGG | - | chr8.3:67917204-67917223 | MS.gene08529:CDS | 50.0% | |
AATTCGAGCCTTGGCAGACT+CGG | + | chr8.3:67919486-67919505 | None:intergenic | 50.0% | |
ACGGACACAGATACGTACAC+CGG | + | chr8.3:67918681-67918700 | None:intergenic | 50.0% | |
ACTCCAGAGAGGGATAGATC+CGG | - | chr8.3:67919539-67919558 | MS.gene08529:intron | 50.0% | |
AGTCTGCCAAGGCTCGAATT+CGG | - | chr8.3:67919486-67919505 | MS.gene08529:intron | 50.0% | |
CTGACACAAACACGTCGACA+CGG | + | chr8.3:67918650-67918669 | None:intergenic | 50.0% | |
CTTGACGACCGGACTTGAAT+AGG | + | chr8.3:67919281-67919300 | None:intergenic | 50.0% | |
GAGGTTTCACCTTCGTCAAC+CGG | - | chr8.3:67919746-67919765 | MS.gene08529:intron | 50.0% | |
GTTTGTGTCAGTGTCGTGTC+CGG | - | chr8.3:67918659-67918678 | MS.gene08529:CDS | 50.0% | |
TCTATGGAGCGGTGAAGCAA+TGG | + | chr8.3:67919195-67919214 | None:intergenic | 50.0% | |
TGTTGTACTGAGAGTCTCGG+TGG | - | chr8.3:67919722-67919741 | MS.gene08529:intron | 50.0% | |
! | ACATGCTCTTGCTGTGGCTA+TGG | - | chr8.3:67917151-67917170 | MS.gene08529:CDS | 50.0% |
! | AGAGCACTTCGTGCGCTTAA+GGG | - | chr8.3:67917714-67917733 | MS.gene08529:intron | 50.0% |
! | CTGCTAGTGTTTGGGATTCG+CGG | - | chr8.3:67917901-67917920 | MS.gene08529:intron | 50.0% |
! | TTGAGTTTGAAGGCGTGTCC+CGG | - | chr8.3:67918567-67918586 | MS.gene08529:intron | 50.0% |
! | TTGGTGTTTGAGAGGTGTGG+TGG | + | chr8.3:67919334-67919353 | None:intergenic | 50.0% |
!! | AAGAGCACTTCGTGCGCTTA+AGG | - | chr8.3:67917713-67917732 | MS.gene08529:intron | 50.0% |
!! | AGCTTGGTGTTTGAGAGGTG+TGG | + | chr8.3:67919337-67919356 | None:intergenic | 50.0% |
!! | GAGACGGAGTAGTGATGGAT+TGG | + | chr8.3:67919244-67919263 | None:intergenic | 50.0% |
!! | TGCCTTTGTGGTTGGTGATG+TGG | + | chr8.3:67919170-67919189 | None:intergenic | 50.0% |
AGCTACTGCTCAAGCTGCTG+TGG | - | chr8.3:67917193-67917212 | MS.gene08529:CDS | 55.0% | |
CGTCAACCGGTGACCTTAGA+CGG | - | chr8.3:67919759-67919778 | MS.gene08529:intron | 55.0% | |
GAGCACTTCGTGCGCTTAAG+GGG | - | chr8.3:67917715-67917734 | MS.gene08529:intron | 55.0% | |
GATCCGGATCTATCCCTCTC+TGG | + | chr8.3:67919545-67919564 | None:intergenic | 55.0% | |
GCTCTTCCCCTATTCTCCCA+TGG | + | chr8.3:67919038-67919057 | None:intergenic | 55.0% | |
TGCTGGAGACGGAGTAGTGA+TGG | + | chr8.3:67919249-67919268 | None:intergenic | 55.0% | |
TGTGGCTATGGCTACAGCTG+AGG | - | chr8.3:67917163-67917182 | MS.gene08529:CDS | 55.0% | |
! | CAACCACCGTCTAAGGTCAC+CGG | + | chr8.3:67919768-67919787 | None:intergenic | 55.0% |
! | CTAAGGTCACCGGTTGACGA+AGG | + | chr8.3:67919758-67919777 | None:intergenic | 55.0% |
!! | AAAGGCCATCGACTCCAGAG+AGG | - | chr8.3:67919528-67919547 | MS.gene08529:intron | 55.0% |
!! | AAGGCCATCGACTCCAGAGA+GGG | - | chr8.3:67919529-67919548 | MS.gene08529:intron | 55.0% |
!! | CTATCCCTCTCTGGAGTCGA+TGG | + | chr8.3:67919536-67919555 | None:intergenic | 55.0% |
CAACCGGTGACCTTAGACGG+TGG | - | chr8.3:67919762-67919781 | MS.gene08529:intron | 60.0% | |
CACAACGAGGGCTTGACGAC+CGG | + | chr8.3:67919292-67919311 | None:intergenic | 60.0% | |
CTGCGACCGAATTCGAGCCT+TGG | + | chr8.3:67919495-67919514 | None:intergenic | 60.0% | |
GCAAGCAACCGAGTCTGCCA+AGG | - | chr8.3:67919475-67919494 | MS.gene08529:intron | 60.0% | |
GGAGTCGATGGCCTTTGCCT+TGG | + | chr8.3:67919524-67919543 | None:intergenic | 60.0% | |
TACTGAGAGTCTCGGTGGCG+AGG | - | chr8.3:67919727-67919746 | MS.gene08529:intron | 60.0% | |
!! | CTAGTGTCGGTGTCGGACAC+CGG | + | chr8.3:67918589-67918608 | None:intergenic | 60.0% |
!! | TAGTGTCGGTGTCGGACACC+GGG | + | chr8.3:67918588-67918607 | None:intergenic | 60.0% |
CGCAGAGTGCGCCAAGGCAA+AGG | - | chr8.3:67919510-67919529 | MS.gene08529:intron | 65.0% | |
TTCGGTCGCAGAGTGCGCCA+AGG | - | chr8.3:67919504-67919523 | MS.gene08529:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 67916739 | 67919793 | 67916739 | ID=MS.gene08529 |
chr8.3 | mRNA | 67916739 | 67919793 | 67916739 | ID=MS.gene08529.t1;Parent=MS.gene08529 |
chr8.3 | exon | 67919781 | 67919793 | 67919781 | ID=MS.gene08529.t1.exon1;Parent=MS.gene08529.t1 |
chr8.3 | CDS | 67919781 | 67919793 | 67919781 | ID=cds.MS.gene08529.t1;Parent=MS.gene08529.t1 |
chr8.3 | exon | 67919231 | 67919394 | 67919231 | ID=MS.gene08529.t1.exon2;Parent=MS.gene08529.t1 |
chr8.3 | CDS | 67919231 | 67919394 | 67919231 | ID=cds.MS.gene08529.t1;Parent=MS.gene08529.t1 |
chr8.3 | exon | 67918576 | 67918824 | 67918576 | ID=MS.gene08529.t1.exon3;Parent=MS.gene08529.t1 |
chr8.3 | CDS | 67918576 | 67918824 | 67918576 | ID=cds.MS.gene08529.t1;Parent=MS.gene08529.t1 |
chr8.3 | exon | 67918227 | 67918364 | 67918227 | ID=MS.gene08529.t1.exon4;Parent=MS.gene08529.t1 |
chr8.3 | CDS | 67918227 | 67918364 | 67918227 | ID=cds.MS.gene08529.t1;Parent=MS.gene08529.t1 |
chr8.3 | exon | 67916739 | 67917587 | 67916739 | ID=MS.gene08529.t1.exon5;Parent=MS.gene08529.t1 |
chr8.3 | CDS | 67916739 | 67917587 | 67916739 | ID=cds.MS.gene08529.t1;Parent=MS.gene08529.t1 |
Gene Sequence |
Protein sequence |