AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20234

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20234.t1 MTR_7g100510 95.195 437 21 0 1 437 2 438 0.0 866
MS.gene20234.t1 MTR_5g042920 47.842 278 116 5 173 437 136 397 6.22e-80 254
MS.gene20234.t1 MTR_7g011820 51.321 265 103 5 173 419 213 469 1.29e-78 253
MS.gene20234.t1 MTR_7g011820 41.584 101 53 2 322 422 195 289 2.07e-16 81.6
MS.gene20234.t1 MTR_5g094430 45.487 277 142 4 150 425 27 295 1.33e-72 234
MS.gene20234.t1 MTR_5g094430 45.487 277 142 4 150 425 49 317 1.71e-72 234
MS.gene20234.t1 MTR_5g094430 46.494 271 136 4 150 419 161 423 5.19e-72 236
MS.gene20234.t1 MTR_3g056100 51.477 237 102 4 183 419 94 317 2.16e-69 226
MS.gene20234.t1 MTR_3g056100 48.571 245 110 4 183 419 94 330 2.51e-69 227
MS.gene20234.t1 MTR_7g080020 44.884 303 125 6 170 431 263 564 3.85e-69 234
MS.gene20234.t1 MTR_3g056100 51.477 237 102 4 183 419 238 461 3.89e-69 229
MS.gene20234.t1 MTR_3g056100 48.571 245 110 4 183 419 238 474 5.78e-69 229
MS.gene20234.t1 MTR_3g009470 37.713 411 188 9 67 425 166 560 2.81e-68 230
MS.gene20234.t1 MTR_5g074400 49.004 251 101 6 185 419 240 479 4.08e-68 227
MS.gene20234.t1 MTR_7g071120 49.362 235 101 3 187 419 165 383 7.31e-66 219
MS.gene20234.t1 MTR_7g071120 52.308 65 30 1 361 425 167 230 2.97e-14 75.1
MS.gene20234.t1 MTR_7g080000 45.324 278 121 5 170 419 217 491 2.55e-65 222
MS.gene20234.t1 MTR_4g082580 46.502 243 89 5 182 423 139 341 1.32e-64 213
MS.gene20234.t1 MTR_3g031220 49.187 246 98 5 185 419 195 424 1.54e-64 216
MS.gene20234.t1 MTR_3g031220 53.226 62 28 1 361 422 199 259 1.44e-13 72.8
MS.gene20234.t1 MTR_4g013260 43.206 287 122 7 138 420 147 396 7.78e-63 211
MS.gene20234.t1 MTR_3g009470 35.246 366 169 9 67 380 166 515 3.04e-47 170
MS.gene20234.t1 MTR_3g009470 57.627 59 24 1 361 419 281 338 2.31e-14 75.5
MS.gene20234.t1 MTR_3g031220 47.343 207 82 5 185 380 195 385 1.47e-45 162
MS.gene20234.t1 MTR_3g031220 53.226 62 28 1 361 422 199 259 6.62e-14 73.2
MS.gene20234.t1 MTR_4g130900 36.145 249 154 3 175 420 173 419 3.04e-44 161
MS.gene20234.t1 MTR_4g130900 53.731 67 30 1 187 252 358 424 6.73e-16 80.1
MS.gene20234.t1 MTR_5g097490 35.686 255 133 4 178 419 75 311 2.10e-43 157
MS.gene20234.t1 MTR_5g097490 40.217 92 49 2 333 424 70 155 5.62e-12 67.4
MS.gene20234.t1 MTR_6g046600 94.118 68 4 0 204 271 18 85 2.69e-39 137
MS.gene20234.t1 MTR_7g109800 61.842 76 29 0 345 420 130 205 4.23e-27 110
MS.gene20234.t1 MTR_7g109800 62.500 56 20 1 189 243 146 201 2.91e-15 76.6
MS.gene20234.t1 MTR_4g094588 47.525 101 53 0 319 419 137 237 8.30e-25 104
MS.gene20234.t1 MTR_4g094588 62.500 56 20 1 189 243 179 234 2.66e-15 77.0
MS.gene20234.t1 MTR_1g077780 43.636 110 58 2 324 429 24 133 4.85e-24 97.8
MS.gene20234.t1 MTR_1g077780 53.571 56 25 1 189 243 63 118 6.00e-13 66.6
MS.gene20234.t1 MTR_1g086790 57.333 75 32 0 345 419 143 217 4.88e-24 102
MS.gene20234.t1 MTR_1g086790 60.714 56 21 1 189 243 159 214 2.19e-15 77.4
MS.gene20234.t1 MTR_8g007270 51.064 94 43 2 343 436 137 227 1.11e-23 99.0
MS.gene20234.t1 MTR_8g007270 62.500 56 20 1 189 243 155 210 9.98e-16 76.6
MS.gene20234.t1 MTR_3g095080 56.944 72 31 0 345 416 153 224 2.75e-23 98.6
MS.gene20234.t1 MTR_3g095080 57.143 56 23 1 189 243 169 224 2.67e-14 72.8
MS.gene20234.t1 MTR_3g095080 56.944 72 31 0 345 416 129 200 3.18e-23 97.8
MS.gene20234.t1 MTR_3g095080 57.143 56 23 1 189 243 145 200 3.40e-14 72.0
MS.gene20234.t1 MTR_5g074200 64.706 68 23 1 189 255 221 288 4.86e-23 99.8
MS.gene20234.t1 MTR_5g074200 52.542 59 27 1 361 419 221 278 5.16e-12 67.0
MS.gene20234.t1 MTR_5g091390 60.274 73 27 1 347 419 146 216 6.57e-23 99.0
MS.gene20234.t1 MTR_5g091390 64.286 56 19 1 189 243 158 213 6.65e-16 78.6
MS.gene20234.t1 MTR_5g043880 47.917 96 50 0 340 435 104 199 8.81e-23 97.8
MS.gene20234.t1 MTR_5g043880 60.714 56 21 1 189 243 125 180 3.14e-14 73.2
MS.gene20234.t1 MTR_8g092140 57.534 73 30 1 345 416 144 216 1.27e-22 96.3
MS.gene20234.t1 MTR_8g092140 57.143 56 23 1 189 243 161 216 2.24e-14 72.8
MS.gene20234.t1 MTR_3g104750 48.810 84 39 1 337 416 77 160 1.28e-22 94.4
MS.gene20234.t1 MTR_3g104750 51.786 56 26 1 189 243 105 160 1.27e-11 63.2
MS.gene20234.t1 MTR_2g033820 56.000 75 33 0 345 419 188 262 3.18e-22 98.2
MS.gene20234.t1 MTR_2g033820 50.000 80 30 2 189 258 204 283 2.85e-15 77.4
MS.gene20234.t1 MTR_6g086555 51.282 78 37 1 344 420 190 267 5.05e-22 97.8
MS.gene20234.t1 MTR_6g086555 50.000 66 31 2 189 252 207 272 1.50e-12 69.3
MS.gene20234.t1 MTR_7g079010 36.306 157 85 3 283 436 75 219 1.04e-21 93.6
MS.gene20234.t1 MTR_7g079010 56.923 65 27 1 180 243 133 197 6.24e-16 77.0
MS.gene20234.t1 MTR_8g092010 50.685 73 36 0 348 420 96 168 2.26e-21 91.7
MS.gene20234.t1 MTR_8g092010 55.357 56 24 1 189 243 109 164 3.56e-11 62.4
MS.gene20234.t1 MTR_4g107970 51.351 74 35 1 348 420 166 239 4.46e-21 95.9
MS.gene20234.t1 MTR_4g107970 52.381 63 27 3 184 243 173 235 1.10e-12 70.1
MS.gene20234.t1 MTR_7g028415 54.667 75 32 1 350 424 83 155 4.81e-21 90.1
MS.gene20234.t1 MTR_7g028415 53.571 56 25 1 189 243 94 149 1.36e-13 68.9
MS.gene20234.t1 MTR_7g028710 54.667 75 32 1 350 424 83 155 4.81e-21 90.1
MS.gene20234.t1 MTR_7g028710 53.571 56 25 1 189 243 94 149 1.36e-13 68.9
MS.gene20234.t1 MTR_4g107970 51.351 74 35 1 348 420 243 316 5.64e-21 95.9
MS.gene20234.t1 MTR_4g107970 52.381 63 27 3 184 243 250 312 1.48e-12 70.1
MS.gene20234.t1 MTR_2g023930 42.857 119 57 3 312 419 247 365 7.49e-21 95.5
MS.gene20234.t1 MTR_2g023930 52.632 57 25 2 189 243 306 362 8.09e-12 67.4
MS.gene20234.t1 MTR_2g045360 40.000 135 62 4 290 419 151 271 1.01e-20 94.4
MS.gene20234.t1 MTR_2g045360 50.877 57 26 2 189 243 212 268 4.02e-11 65.1
MS.gene20234.t1 MTR_3g095040 44.706 85 47 0 344 428 102 186 2.21e-20 89.4
MS.gene20234.t1 MTR_3g095040 57.143 56 23 1 189 243 119 174 7.08e-13 67.8
MS.gene20234.t1 MTR_4g094412 51.351 74 35 1 348 420 222 295 2.82e-20 93.2
MS.gene20234.t1 MTR_4g094412 54.386 57 24 2 189 243 235 291 8.68e-13 70.5
MS.gene20234.t1 MTR_4g094412 51.351 74 35 1 348 420 231 304 2.83e-20 93.2
MS.gene20234.t1 MTR_4g094412 54.386 57 24 2 189 243 244 300 9.60e-13 70.1
MS.gene20234.t1 MTR_7g110720 50.685 73 35 1 348 419 177 249 4.31e-20 92.0
MS.gene20234.t1 MTR_7g110720 52.632 57 25 2 189 243 190 246 7.67e-12 67.0
MS.gene20234.t1 MTR_5g016610 48.000 75 38 1 356 429 195 269 4.33e-20 90.1
MS.gene20234.t1 MTR_5g016610 51.429 70 31 3 176 243 188 256 1.50e-14 73.9
MS.gene20234.t1 MTR_2g105060 52.857 70 32 1 351 419 85 154 5.02e-20 89.4
MS.gene20234.t1 MTR_2g105060 54.386 57 24 2 189 243 95 151 4.05e-14 72.0
MS.gene20234.t1 MTR_4g132430 41.489 94 54 1 327 419 94 187 5.20e-20 91.3
MS.gene20234.t1 MTR_4g132430 50.877 57 26 2 189 243 128 184 2.07e-11 65.5
MS.gene20234.t1 MTR_7g110720 50.685 73 35 1 348 419 204 276 5.71e-20 92.0
MS.gene20234.t1 MTR_7g110720 52.632 57 25 2 189 243 217 273 8.54e-12 67.0
MS.gene20234.t1 MTR_4g122530 52.055 73 35 0 348 420 196 268 7.23e-20 91.7
MS.gene20234.t1 MTR_4g122530 60.714 56 21 1 189 243 209 264 6.06e-15 76.6
MS.gene20234.t1 MTR_3g053330 47.561 82 42 1 339 419 230 311 1.15e-19 91.3
MS.gene20234.t1 MTR_3g053330 50.000 58 27 2 189 244 252 309 4.72e-12 68.2
MS.gene20234.t1 MTR_2g105060 52.857 70 32 1 351 419 160 229 1.26e-19 89.7
MS.gene20234.t1 MTR_2g105060 54.386 57 24 2 189 243 170 226 6.01e-14 72.8
MS.gene20234.t1 MTR_4g094908 51.429 70 33 1 361 429 267 336 1.70e-19 89.7
MS.gene20234.t1 MTR_4g094908 53.731 67 28 3 179 243 258 323 6.22e-15 75.9
MS.gene20234.t1 MTR_1g009613 52.941 68 31 1 352 418 254 321 2.14e-19 89.4
MS.gene20234.t1 MTR_1g009613 48.810 84 40 3 179 260 254 336 4.68e-17 82.4
MS.gene20234.t1 MTR_4g132430 41.489 94 54 1 327 419 228 321 2.29e-19 90.5
MS.gene20234.t1 MTR_4g132430 50.877 57 26 2 189 243 262 318 3.97e-11 65.1
MS.gene20234.t1 MTR_4g127040 57.576 66 27 1 352 416 237 302 6.39e-19 87.4
MS.gene20234.t1 MTR_4g127040 50.725 69 31 3 179 245 237 304 3.06e-14 73.6
MS.gene20234.t1 MTR_8g087000 54.930 71 31 1 361 430 78 148 6.43e-19 86.3
MS.gene20234.t1 MTR_8g087000 50.820 61 28 2 186 244 75 135 2.20e-13 70.1
MS.gene20234.t1 MTR_8g087000 54.930 71 31 1 361 430 77 147 7.09e-19 85.9
MS.gene20234.t1 MTR_8g087000 50.820 61 28 2 186 244 74 134 2.67e-13 69.7
MS.gene20234.t1 MTR_7g009730 50.633 79 36 2 348 425 207 283 1.01e-18 89.0
MS.gene20234.t1 MTR_7g009730 50.746 67 30 3 183 246 213 279 4.02e-12 68.6
MS.gene20234.t1 MTR_8g096730 50.000 68 34 0 349 416 59 126 1.71e-18 82.4
MS.gene20234.t1 MTR_8g096730 55.357 56 24 1 189 243 71 126 2.80e-15 73.2
MS.gene20234.t1 MTR_1g078260 52.857 70 32 1 348 416 235 304 1.91e-18 87.8
MS.gene20234.t1 MTR_1g078260 51.724 58 26 2 189 244 248 305 9.89e-11 63.9
MS.gene20234.t1 MTR_1g015140 56.667 60 26 0 357 416 99 158 2.88e-18 82.0
MS.gene20234.t1 MTR_1g015140 53.571 56 25 1 189 243 103 158 9.22e-13 66.2
MS.gene20234.t1 MTR_2g088000 43.529 85 47 1 336 419 325 409 3.55e-18 87.4
MS.gene20234.t1 MTR_7g079040 42.241 116 49 4 321 434 131 230 4.45e-18 85.1
MS.gene20234.t1 MTR_7g079040 44.444 72 38 2 187 256 153 224 5.11e-11 63.9
MS.gene20234.t1 MTR_7g062220 60.714 56 22 0 361 416 125 180 4.81e-18 85.1
MS.gene20234.t1 MTR_7g062220 58.929 56 22 1 189 243 125 180 2.25e-13 71.2
MS.gene20234.t1 MTR_1g013760 50.746 67 32 1 351 416 131 197 5.70e-18 84.3
MS.gene20234.t1 MTR_1g013760 54.098 61 26 2 189 247 141 201 1.02e-15 77.8
MS.gene20234.t1 MTR_4g049790 40.816 98 47 2 333 419 275 372 7.18e-18 86.3
MS.gene20234.t1 MTR_4g049790 41.772 79 40 3 189 261 313 391 1.42e-11 66.6
MS.gene20234.t1 MTR_4g007060 52.381 63 29 1 358 419 126 188 1.06e-17 83.6
MS.gene20234.t1 MTR_4g007060 33.824 136 73 3 189 307 129 264 1.45e-15 77.0
MS.gene20234.t1 MTR_4g007060 52.381 63 29 1 358 419 160 222 1.96e-17 83.2
MS.gene20234.t1 MTR_4g007060 33.824 136 73 3 189 307 163 298 2.43e-15 77.0
MS.gene20234.t1 MTR_1g070455 53.226 62 28 1 356 416 289 350 2.20e-17 83.6
MS.gene20234.t1 MTR_1g070455 49.383 81 36 4 177 253 281 360 1.55e-14 75.1
MS.gene20234.t1 MTR_3g106060 36.508 126 56 5 315 416 70 195 3.78e-17 82.0
MS.gene20234.t1 MTR_3g106060 48.052 77 36 3 175 247 123 199 7.51e-16 78.2
MS.gene20234.t1 MTR_2g016770 52.564 78 31 3 361 432 36 113 5.42e-17 80.1
MS.gene20234.t1 MTR_2g016770 50.000 60 28 2 186 243 33 92 1.79e-13 69.7
MS.gene20234.t1 MTR_8g028565 46.000 100 35 4 322 419 133 215 5.52e-17 82.0
MS.gene20234.t1 MTR_8g028565 42.857 77 42 2 182 256 149 225 9.52e-12 66.2
MS.gene20234.t1 MTR_2g016770 52.564 78 31 3 361 432 28 105 6.31e-17 79.7
MS.gene20234.t1 MTR_2g016770 50.000 60 28 2 186 243 25 84 2.52e-13 69.3
MS.gene20234.t1 MTR_2g083870 57.377 61 25 1 361 420 81 141 8.55e-17 80.5
MS.gene20234.t1 MTR_2g083870 51.667 60 27 2 186 243 78 137 6.57e-12 65.9
MS.gene20234.t1 MTR_5g097500 46.667 75 40 0 345 419 215 289 9.04e-17 81.3
MS.gene20234.t1 MTR_5g097500 49.091 55 28 0 189 243 84 138 1.57e-11 65.5
MS.gene20234.t1 MTR_5g097500 46.154 65 34 1 180 243 222 286 1.80e-11 65.5
MS.gene20234.t1 MTR_8g098945 52.174 69 31 2 352 419 122 189 1.44e-16 80.1
MS.gene20234.t1 MTR_8g098945 50.704 71 31 3 189 257 130 198 6.39e-13 69.3
MS.gene20234.t1 MTR_2g032030 45.833 96 45 3 325 419 238 327 2.80e-16 80.9
MS.gene20234.t1 MTR_2g032030 45.714 70 36 2 189 256 268 337 3.48e-11 65.1
MS.gene20234.t1 MTR_2g032030 45.833 96 45 3 325 419 238 327 3.12e-16 80.9
MS.gene20234.t1 MTR_2g032030 45.714 70 36 2 189 256 268 337 5.17e-11 64.7
MS.gene20234.t1 MTR_1g099600 41.414 99 42 2 322 419 162 245 4.72e-16 79.0
MS.gene20234.t1 MTR_1g099600 44.737 76 40 2 183 256 180 255 7.81e-15 75.5
MS.gene20234.t1 MTR_0117s0040 46.067 89 43 3 333 417 45 132 6.52e-16 77.4
MS.gene20234.t1 MTR_0117s0040 47.761 67 32 3 179 243 66 131 6.27e-12 65.9
MS.gene20234.t1 MTR_3g108960 47.312 93 37 4 325 416 290 371 7.27e-16 79.3
MS.gene20234.t1 MTR_3g108960 41.379 87 48 3 168 252 295 380 1.07e-12 69.7
MS.gene20234.t1 MTR_4g049760 45.205 73 39 1 348 419 278 350 2.04e-15 78.6
MS.gene20234.t1 MTR_8g067650 47.126 87 44 2 173 257 324 410 2.07e-15 78.6
MS.gene20234.t1 MTR_8g067650 38.235 102 46 3 323 422 316 402 4.60e-14 74.3
MS.gene20234.t1 MTR_2g024350 44.444 81 42 2 355 432 3 83 3.49e-15 75.1
MS.gene20234.t1 MTR_2g024350 52.113 71 32 2 189 257 9 79 2.08e-14 72.8
MS.gene20234.t1 MTR_7g109600 48.571 70 33 2 360 426 53 122 4.52e-15 75.5
MS.gene20234.t1 MTR_7g109600 54.386 57 24 2 189 243 54 110 2.89e-12 67.0
MS.gene20234.t1 MTR_1g013790 45.455 66 35 1 355 419 96 161 6.65e-15 74.7
MS.gene20234.t1 MTR_1g013790 51.724 58 26 2 189 244 102 159 2.51e-13 70.1
MS.gene20234.t1 MTR_2g024380 47.126 87 44 2 173 257 236 322 8.51e-15 76.6
MS.gene20234.t1 MTR_2g024380 38.532 109 50 3 324 429 229 323 3.29e-14 74.7
MS.gene20234.t1 MTR_3g090860 48.649 74 30 2 344 414 122 190 1.38e-14 75.1
MS.gene20234.t1 MTR_3g090860 51.667 60 25 2 186 241 131 190 4.22e-12 67.4
MS.gene20234.t1 MTR_5g067680 49.275 69 29 3 178 241 192 259 1.59e-14 75.1
MS.gene20234.t1 MTR_8g099350 45.679 81 38 3 165 241 111 189 5.42e-14 73.6
MS.gene20234.t1 MTR_8g099350 50.704 71 29 2 350 414 119 189 2.65e-13 71.2
MS.gene20234.t1 MTR_8g067635 46.753 77 39 2 183 257 344 420 8.85e-14 73.6
MS.gene20234.t1 MTR_8g067635 37.624 101 48 2 323 422 326 412 2.01e-13 72.4
MS.gene20234.t1 MTR_8g069935 54.688 64 27 2 184 245 327 390 9.54e-14 73.2
MS.gene20234.t1 MTR_8g069935 48.333 60 30 1 361 419 332 391 4.13e-13 71.2
MS.gene20234.t1 MTR_2g075610 41.860 86 46 2 355 436 23 108 5.83e-13 67.8
MS.gene20234.t1 MTR_4g047580 34.188 117 74 2 304 419 227 341 1.27e-12 70.1
MS.gene20234.t1 MTR_2g075750 36.893 103 56 3 343 436 5 107 2.92e-12 65.5
MS.gene20234.t1 MTR_2g075700 33.871 124 63 4 295 414 93 201 4.69e-12 67.0
MS.gene20234.t1 MTR_6g053200 46.667 60 31 1 361 419 331 390 8.47e-12 67.4
MS.gene20234.t1 MTR_8g027860 49.123 57 25 2 189 241 137 193 3.03e-11 65.1
MS.gene20234.t1 MTR_2g075680 46.774 62 30 1 356 414 144 205 4.96e-11 63.9
MS.gene20234.t1 MTR_5g044695 40.000 60 36 0 327 386 44 103 9.30e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20234.t1 AT2G37260 44.843 446 183 13 1 420 1 409 1.79e-106 322
MS.gene20234.t1 AT2G37260 45.152 361 138 10 83 420 4 327 8.03e-87 269
MS.gene20234.t1 AT2G37260 45.706 361 138 9 83 420 4 329 2.86e-86 267
MS.gene20234.t1 AT2G03340 51.837 245 109 4 182 425 244 480 4.92e-80 256
MS.gene20234.t1 AT1G13960 49.600 250 110 3 182 419 70 315 4.70e-77 244
MS.gene20234.t1 AT1G13960 49.600 250 110 3 182 419 223 468 4.10e-76 246
MS.gene20234.t1 AT2G38470 51.639 244 106 5 185 419 181 421 1.90e-68 226
MS.gene20234.t1 AT4G26640 43.056 288 143 7 150 425 128 406 1.91e-68 226
MS.gene20234.t1 AT4G26640 43.056 288 143 7 150 425 96 374 2.38e-68 225
MS.gene20234.t1 AT4G26640 43.056 288 143 7 150 425 168 446 3.95e-68 226
MS.gene20234.t1 AT4G26640 47.131 244 113 5 189 425 36 270 4.46e-68 221
MS.gene20234.t1 AT4G26640 47.131 244 113 5 189 425 36 270 4.46e-68 221
MS.gene20234.t1 AT4G26640 47.131 244 113 5 189 425 36 270 4.46e-68 221
MS.gene20234.t1 AT4G26640 47.131 244 113 5 189 425 36 270 4.46e-68 221
MS.gene20234.t1 AT5G56270 45.230 283 99 7 186 419 271 546 6.60e-63 215
MS.gene20234.t1 AT5G56270 39.823 113 64 2 189 297 488 600 1.33e-13 73.6
MS.gene20234.t1 AT3G01080 46.610 236 93 3 184 419 163 365 9.15e-63 209
MS.gene20234.t1 AT5G07100 46.862 239 70 4 182 419 18 200 9.42e-63 202
MS.gene20234.t1 AT5G07100 46.753 77 39 2 168 243 122 197 5.45e-14 71.2
MS.gene20234.t1 AT5G07100 46.862 239 70 4 182 419 18 200 9.42e-63 202
MS.gene20234.t1 AT5G07100 46.753 77 39 2 168 243 122 197 5.45e-14 71.2
MS.gene20234.t1 AT5G07100 46.862 239 70 4 182 419 18 200 9.42e-63 202
MS.gene20234.t1 AT5G07100 46.753 77 39 2 168 243 122 197 5.45e-14 71.2
MS.gene20234.t1 AT5G07100 46.862 239 70 4 182 419 18 200 9.42e-63 202
MS.gene20234.t1 AT5G07100 46.753 77 39 2 168 243 122 197 5.45e-14 71.2
MS.gene20234.t1 AT5G07100 46.862 239 70 4 182 419 111 293 1.39e-62 205
MS.gene20234.t1 AT5G07100 46.753 77 39 2 168 243 215 290 8.77e-14 72.4
MS.gene20234.t1 AT4G26440 43.750 256 122 3 186 419 176 431 2.15e-62 211
MS.gene20234.t1 AT3G01080 46.610 236 93 3 184 419 201 403 2.62e-62 209
MS.gene20234.t1 AT2G30250 45.082 244 106 5 185 419 163 387 5.73e-55 187
MS.gene20234.t1 AT2G04880 39.921 253 134 5 189 432 112 355 1.65e-51 180
MS.gene20234.t1 AT2G04880 45.570 79 42 1 354 432 105 182 2.71e-15 78.2
MS.gene20234.t1 AT4G30935 38.525 244 123 8 186 420 166 391 2.44e-44 161
MS.gene20234.t1 AT4G30935 47.297 74 38 1 189 261 332 405 5.70e-16 80.1
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 3.93e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.07e-12 69.7
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.12e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.21e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.12e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.21e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.20e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.12e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.26e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.17e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.26e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.17e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.44e-44 166
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.18e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.71e-44 165
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.21e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 4.76e-44 165
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 3.26e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 395 594 5.69e-44 165
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 396 459 3.51e-12 69.3
MS.gene20234.t1 AT4G12020 45.854 205 100 4 182 380 462 661 9.75e-44 164
MS.gene20234.t1 AT4G12020 48.485 66 32 2 354 419 463 526 4.28e-12 68.9
MS.gene20234.t1 AT3G01080 66.197 71 24 0 184 254 201 271 2.09e-28 114
MS.gene20234.t1 AT3G01080 59.322 59 23 1 361 419 206 263 9.22e-16 78.6
MS.gene20234.t1 AT2G04880 49.550 111 55 1 322 432 270 379 9.92e-27 112
MS.gene20234.t1 AT2G04880 64.912 57 20 0 189 245 112 168 5.24e-20 92.8
MS.gene20234.t1 AT2G04880 64.286 56 19 1 189 243 308 363 4.84e-17 83.6
MS.gene20234.t1 AT2G04880 45.570 79 42 1 354 432 105 182 3.02e-15 78.2
MS.gene20234.t1 AT1G29860 55.814 86 36 1 344 429 122 205 2.68e-25 105
MS.gene20234.t1 AT1G29860 64.286 56 19 1 189 243 137 192 7.00e-16 78.2
MS.gene20234.t1 AT4G18170 58.667 75 31 0 345 419 157 231 3.53e-25 105
MS.gene20234.t1 AT4G18170 62.500 56 20 1 189 243 173 228 1.45e-15 77.8
MS.gene20234.t1 AT5G46350 54.217 83 38 0 346 428 169 251 8.76e-25 104
MS.gene20234.t1 AT5G46350 60.714 56 21 1 189 243 184 239 1.62e-14 74.7
MS.gene20234.t1 AT5G49520 59.459 74 28 1 347 420 210 281 1.96e-24 104
MS.gene20234.t1 AT5G49520 62.500 56 20 1 189 243 222 277 2.92e-15 77.8
MS.gene20234.t1 AT2G47260 60.811 74 27 1 347 420 163 234 2.68e-24 103
MS.gene20234.t1 AT2G47260 58.929 56 22 1 189 243 175 230 1.29e-14 75.1
MS.gene20234.t1 AT2G44745 51.087 92 43 2 334 425 120 209 1.03e-23 99.0
MS.gene20234.t1 AT2G44745 62.500 56 20 1 189 243 146 201 6.61e-16 77.0
MS.gene20234.t1 AT5G41570 60.563 71 28 0 346 416 84 154 1.80e-23 97.4
MS.gene20234.t1 AT5G41570 57.143 56 23 1 189 243 99 154 1.46e-14 72.0
MS.gene20234.t1 AT1G55600 59.722 72 29 0 348 419 295 366 2.17e-23 102
MS.gene20234.t1 AT1G55600 58.929 56 22 1 189 243 308 363 4.53e-13 71.2
MS.gene20234.t1 AT1G69310 51.899 79 38 0 339 417 126 204 2.80e-23 99.4
MS.gene20234.t1 AT1G69310 60.714 56 21 1 189 243 148 203 6.19e-15 75.5
MS.gene20234.t1 AT1G69310 51.899 79 38 0 339 417 126 204 2.80e-23 99.4
MS.gene20234.t1 AT1G69310 60.714 56 21 1 189 243 148 203 6.19e-15 75.5
MS.gene20234.t1 AT1G69310 51.899 79 38 0 339 417 126 204 2.80e-23 99.4
MS.gene20234.t1 AT1G69310 60.714 56 21 1 189 243 148 203 6.19e-15 75.5
MS.gene20234.t1 AT1G64000 60.870 69 27 0 348 416 102 170 5.15e-23 96.3
MS.gene20234.t1 AT1G64000 57.143 56 23 1 189 243 115 170 6.11e-15 73.6
MS.gene20234.t1 AT3G62340 62.687 67 23 1 356 420 112 178 4.51e-22 95.9
MS.gene20234.t1 AT3G62340 57.143 56 23 1 189 243 119 174 3.52e-13 70.1
MS.gene20234.t1 AT4G39410 56.944 72 31 0 345 416 208 279 5.20e-22 96.3
MS.gene20234.t1 AT4G39410 48.611 72 36 1 189 259 224 295 1.15e-14 74.7
MS.gene20234.t1 AT5G26170 53.623 69 32 0 348 416 101 169 1.31e-21 92.0
MS.gene20234.t1 AT5G26170 55.357 56 24 1 189 243 114 169 7.33e-15 72.8
MS.gene20234.t1 AT4G04450 43.636 110 56 3 330 433 165 274 3.15e-21 95.9
MS.gene20234.t1 AT4G04450 52.632 57 25 2 189 243 199 255 5.90e-12 67.8
MS.gene20234.t1 AT4G24240 53.750 80 35 2 352 430 273 351 3.40e-21 94.7
MS.gene20234.t1 AT4G24240 54.412 68 28 3 179 244 273 339 2.03e-15 77.8
MS.gene20234.t1 AT5G15130 51.282 78 37 1 348 424 173 250 4.50e-21 95.9
MS.gene20234.t1 AT5G15130 50.794 63 28 3 184 243 180 242 1.30e-11 67.0
MS.gene20234.t1 AT5G15130 48.780 82 41 1 348 428 215 296 4.85e-21 95.9
MS.gene20234.t1 AT5G15130 50.794 63 28 3 184 243 222 284 1.44e-11 66.6
MS.gene20234.t1 AT5G13080 53.333 75 33 1 350 424 57 129 6.54e-21 89.0
MS.gene20234.t1 AT5G13080 57.143 56 23 1 189 243 68 123 6.34e-16 75.1
MS.gene20234.t1 AT2G21900 51.429 70 33 1 351 419 99 168 8.67e-21 90.5
MS.gene20234.t1 AT2G21900 51.786 56 26 1 189 243 110 165 2.12e-13 69.3
MS.gene20234.t1 AT1G68150 37.226 137 80 3 297 428 168 303 9.82e-21 93.6
MS.gene20234.t1 AT1G68150 56.140 57 23 2 189 243 236 292 4.71e-13 70.9
MS.gene20234.t1 AT4G04450 43.636 110 56 3 330 433 259 368 1.08e-20 94.7
MS.gene20234.t1 AT4G04450 52.632 57 25 2 189 243 293 349 9.40e-12 67.4
MS.gene20234.t1 AT2G46130 53.521 71 33 0 346 416 16 86 1.50e-20 87.0
MS.gene20234.t1 AT2G46130 62.500 56 20 1 189 243 31 86 3.37e-16 74.7
MS.gene20234.t1 AT3G01970 52.174 69 33 0 350 418 55 123 1.34e-19 85.5
MS.gene20234.t1 AT3G01970 54.386 57 25 1 189 244 66 122 2.26e-13 67.8
MS.gene20234.t1 AT1G80840 34.437 151 86 4 270 419 68 206 1.70e-19 89.0
MS.gene20234.t1 AT1G80840 54.386 57 24 2 189 243 147 203 5.82e-13 69.7
MS.gene20234.t1 AT4G01720 52.055 73 34 1 348 419 227 299 5.11e-19 89.7
MS.gene20234.t1 AT4G01720 52.632 57 25 2 189 243 240 296 1.61e-11 66.6
MS.gene20234.t1 AT1G69810 44.330 97 51 3 328 421 112 208 5.47e-19 88.2
MS.gene20234.t1 AT4G23550 45.783 83 44 1 349 430 129 211 9.19e-19 87.0
MS.gene20234.t1 AT4G23550 31.138 167 93 5 93 257 63 209 1.65e-11 65.5
MS.gene20234.t1 AT2G23320 56.250 64 27 1 356 418 236 299 9.88e-19 87.0
MS.gene20234.t1 AT2G23320 56.140 57 23 2 189 243 241 297 1.09e-13 72.0
MS.gene20234.t1 AT1G62300 49.315 73 36 1 348 419 300 372 1.13e-18 89.0
MS.gene20234.t1 AT1G62300 52.632 57 25 2 189 243 313 369 8.25e-12 67.4
MS.gene20234.t1 AT1G69810 44.000 100 53 3 325 421 167 266 1.15e-18 87.8
MS.gene20234.t1 AT1G29280 44.762 105 49 3 322 424 42 139 1.17e-18 85.9
MS.gene20234.t1 AT1G29280 53.333 60 26 2 186 243 72 131 4.26e-13 69.7
MS.gene20234.t1 AT4G31800 48.235 85 43 1 351 434 102 186 1.20e-18 85.5
MS.gene20234.t1 AT4G31800 50.877 57 26 2 189 243 112 168 2.98e-13 69.7
MS.gene20234.t1 AT4G22070 44.048 84 46 1 337 419 274 357 1.55e-18 88.2
MS.gene20234.t1 AT4G22070 52.632 57 25 2 189 243 298 354 1.06e-11 67.0
MS.gene20234.t1 AT4G22070 44.048 84 46 1 337 419 274 357 1.55e-18 88.2
MS.gene20234.t1 AT4G22070 52.632 57 25 2 189 243 298 354 1.06e-11 67.0
MS.gene20234.t1 AT4G22070 44.048 84 46 1 337 419 274 357 1.55e-18 88.2
MS.gene20234.t1 AT4G22070 52.632 57 25 2 189 243 298 354 1.06e-11 67.0
MS.gene20234.t1 AT4G22070 44.048 84 46 1 337 419 274 357 1.55e-18 88.2
MS.gene20234.t1 AT4G22070 52.632 57 25 2 189 243 298 354 1.06e-11 67.0
MS.gene20234.t1 AT4G31800 52.857 70 32 1 351 419 167 236 2.56e-18 85.9
MS.gene20234.t1 AT4G31800 50.877 57 26 2 189 243 177 233 4.34e-13 70.1
MS.gene20234.t1 AT2G30590 53.731 67 29 2 361 425 314 380 2.76e-18 86.7
MS.gene20234.t1 AT2G30590 52.055 73 30 4 177 245 301 372 3.67e-14 74.3
MS.gene20234.t1 AT1G18860 49.315 73 36 1 348 419 227 299 3.00e-18 87.4
MS.gene20234.t1 AT1G18860 54.386 57 24 2 189 243 240 296 5.91e-11 64.7
MS.gene20234.t1 AT5G64810 57.377 61 26 0 357 417 107 167 3.01e-18 83.2
MS.gene20234.t1 AT5G64810 53.448 58 22 2 189 243 111 166 1.94e-11 63.5
MS.gene20234.t1 AT2G25000 53.846 65 29 1 356 419 99 163 3.12e-18 84.0
MS.gene20234.t1 AT2G25000 50.877 57 26 2 189 243 104 160 5.53e-12 65.9
MS.gene20234.t1 AT2G25000 53.846 65 29 1 356 419 99 163 3.12e-18 84.0
MS.gene20234.t1 AT2G25000 50.877 57 26 2 189 243 104 160 5.53e-12 65.9
MS.gene20234.t1 AT1G69310 46.835 79 38 1 339 417 126 200 4.98e-18 84.3
MS.gene20234.t1 AT2G25000 53.846 65 29 1 356 419 121 185 6.51e-18 83.6
MS.gene20234.t1 AT2G25000 50.877 57 26 2 189 243 126 182 8.26e-12 65.5
MS.gene20234.t1 AT4G01250 57.353 68 27 2 354 419 121 188 7.87e-18 84.0
MS.gene20234.t1 AT4G01250 44.737 76 40 2 189 262 129 204 2.10e-12 68.2
MS.gene20234.t1 AT4G31550 51.613 62 29 1 356 416 242 303 8.23e-18 84.3
MS.gene20234.t1 AT4G31550 45.833 96 41 4 179 272 238 324 1.49e-15 77.8
MS.gene20234.t1 AT2G25000 53.846 65 29 1 356 419 142 206 8.50e-18 83.6
MS.gene20234.t1 AT2G25000 50.877 57 26 2 189 243 147 203 1.10e-11 65.5
MS.gene20234.t1 AT4G31550 51.613 62 29 1 356 416 241 302 8.53e-18 84.3
MS.gene20234.t1 AT4G31550 45.833 96 41 4 179 272 237 323 1.59e-15 77.8
MS.gene20234.t1 AT3G04670 52.941 68 31 1 361 427 263 330 1.03e-17 84.3
MS.gene20234.t1 AT3G04670 52.055 73 30 4 177 245 250 321 7.74e-14 72.8
MS.gene20234.t1 AT5G43290 58.929 56 23 0 361 416 115 170 1.46e-17 82.8
MS.gene20234.t1 AT5G43290 52.778 72 33 1 173 243 99 170 1.41e-14 74.3
MS.gene20234.t1 AT5G52830 43.878 98 39 2 323 419 143 225 1.78e-17 84.0
MS.gene20234.t1 AT5G52830 48.611 72 35 2 187 256 164 235 1.04e-13 72.4
MS.gene20234.t1 AT5G28650 50.000 68 33 1 361 427 263 330 5.90e-17 82.0
MS.gene20234.t1 AT5G28650 50.685 73 31 4 177 245 250 321 4.31e-13 70.5
MS.gene20234.t1 AT2G24570 48.810 84 40 3 179 260 235 317 7.43e-17 81.6
MS.gene20234.t1 AT2G24570 53.448 58 26 1 361 417 244 301 2.18e-16 80.1
MS.gene20234.t1 AT3G58710 40.000 115 60 3 322 434 39 146 1.56e-16 79.7
MS.gene20234.t1 AT3G58710 51.667 60 27 2 186 243 69 128 8.08e-12 65.9
MS.gene20234.t1 AT2G34830 53.425 73 32 2 349 419 203 275 1.91e-16 81.6
MS.gene20234.t1 AT2G34830 52.632 57 25 2 189 243 216 272 3.60e-11 65.1
MS.gene20234.t1 AT2G34830 53.425 73 32 2 349 419 212 284 2.26e-16 81.3
MS.gene20234.t1 AT2G34830 52.632 57 25 2 189 243 225 281 3.79e-11 65.1
MS.gene20234.t1 AT3G58710 41.071 112 57 3 325 434 41 145 3.32e-16 79.0
MS.gene20234.t1 AT3G58710 51.667 60 27 2 186 243 68 127 9.19e-12 65.9
MS.gene20234.t1 AT1G30650 50.667 75 35 2 349 421 205 279 4.46e-16 80.5
MS.gene20234.t1 AT2G46130 47.887 71 33 1 346 416 16 82 1.87e-15 72.4
MS.gene20234.t1 AT2G46130 57.143 56 19 2 189 243 31 82 9.88e-12 62.0
MS.gene20234.t1 AT5G45050 48.077 104 37 5 323 423 1017 1106 3.26e-15 79.0
MS.gene20234.t1 AT5G45050 48.077 104 37 5 323 423 1156 1245 3.60e-15 78.6
MS.gene20234.t1 AT5G45050 48.077 104 37 5 323 423 1128 1217 3.61e-15 78.6
MS.gene20234.t1 AT1G66560 57.895 57 21 1 361 414 104 160 1.08e-14 73.9
MS.gene20234.t1 AT2G40740 38.542 96 47 2 322 414 144 230 1.73e-13 71.2
MS.gene20234.t1 AT2G40740 44.156 77 36 3 172 241 154 230 2.33e-13 70.9
MS.gene20234.t1 AT2G40740 38.542 96 47 2 322 414 153 239 2.16e-13 70.9
MS.gene20234.t1 AT2G40740 44.156 77 36 3 172 241 163 239 2.70e-13 70.9
MS.gene20234.t1 AT1G66550 40.625 96 46 3 324 414 76 165 9.02e-13 68.6
MS.gene20234.t1 AT1G66550 52.632 57 24 1 361 414 104 160 1.25e-12 68.2
MS.gene20234.t1 AT1G80590 46.774 62 30 1 361 419 86 147 1.78e-11 64.3
MS.gene20234.t1 AT4G11070 49.180 61 25 3 186 241 107 166 2.18e-11 64.7
MS.gene20234.t1 AT4G11070 54.386 57 23 1 361 414 110 166 2.30e-11 64.7
MS.gene20234.t1 AT4G11070 49.180 61 25 3 186 241 139 198 2.48e-11 65.1
MS.gene20234.t1 AT4G11070 54.386 57 23 1 361 414 142 198 2.81e-11 64.7
MS.gene20234.t1 AT5G24110 46.032 63 30 2 183 241 108 170 2.65e-11 64.7
MS.gene20234.t1 AT3G56400 43.077 65 34 1 353 414 113 177 5.17e-11 63.9
MS.gene20234.t1 AT4G23810 44.444 81 41 2 361 437 159 239 5.71e-11 63.9
MS.gene20234.t1 AT4G23810 45.902 61 29 2 186 242 156 216 7.03e-11 63.5
MS.gene20234.t1 AT1G66600 49.153 59 27 1 359 414 102 160 8.71e-11 62.4
MS.gene20234.t1 AT5G01900 45.000 60 30 1 358 414 108 167 9.49e-11 62.8

Find 98 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTCGCTGGAGGAAATA+TGG 0.218614 7.3:+12401375 MS.gene20234:CDS
GGCTTGAACCTCACTGTCTT+TGG 0.252094 7.3:-12399041 None:intergenic
TATGTAGTCACAAATGATTT+TGG 0.264303 7.3:-12401905 None:intergenic
GGATATAACTGGAGAAAATA+TGG 0.302862 7.3:+12400345 MS.gene20234:CDS
ATTGCAGAAATTGTTTATAA+AGG 0.309738 7.3:+12400471 MS.gene20234:CDS
TATGGACAGAAGCAAGTAAA+AGG 0.334183 7.3:+12400363 MS.gene20234:CDS
CCTCACTGTCTTTGGCCTAA+TGG 0.341358 7.3:-12399033 None:intergenic
GATTGATTGGTATCAGGTTT+GGG 0.346071 7.3:-12399404 None:intergenic
AAAAGTATAAACCTGGGATA+TGG 0.347198 7.3:-12401420 None:intergenic
ATGAGAGATTGATTGGTATC+AGG 0.351230 7.3:-12399410 None:intergenic
AGATTGATTGGTATCAGGTT+TGG 0.354034 7.3:-12399405 None:intergenic
TCCATTGATTTCTGTGGTTG+TGG 0.361586 7.3:-12400135 None:intergenic
GAATGGTTCAAGATAAAGTA+TGG 0.369467 7.3:+12400565 MS.gene20234:CDS
TTGCCAAACCAGTTGCTTCA+AGG 0.393390 7.3:+12398916 MS.gene20234:CDS
CTTCGTATGATGGATATAAC+TGG 0.406141 7.3:+12400334 MS.gene20234:CDS
GTAGTTTGAGAAGATGCAAT+TGG 0.426919 7.3:-12399002 None:intergenic
AGGCCTTGAAGCAACTGGTT+TGG 0.438001 7.3:-12398919 None:intergenic
GAAAATTCTTGTGGTCTAAG+TGG 0.439008 7.3:+12400672 MS.gene20234:CDS
TTTGTAAATGAGAGATTGAT+TGG 0.444415 7.3:-12399417 None:intergenic
GAAGGGGAGATATTCGTTGC+TGG 0.448467 7.3:-12399062 None:intergenic
CAAGTAGGCCTTGAAGCAAC+TGG 0.450411 7.3:-12398924 None:intergenic
CCTTCCTACAGAAACATATC+AGG 0.450501 7.3:+12400230 MS.gene20234:CDS
CACTGAATGTTCACCTGAGA+AGG 0.451474 7.3:-12399080 None:intergenic
AAACTACAATATCCGCCATT+AGG 0.452468 7.3:+12399018 MS.gene20234:CDS
AGTTGTCATGGTTAAGATGC+TGG 0.454295 7.3:-12400167 None:intergenic
CGAAACTCGGGAGCAACATC+AGG 0.455548 7.3:+12400528 MS.gene20234:CDS
AACGAATATCTCCCCTTCTC+AGG 0.464851 7.3:+12399067 MS.gene20234:CDS
TCCTTGGAGATGGCTTTCGC+TGG 0.465481 7.3:+12401364 MS.gene20234:CDS
TTTGATGTTGTTGCTTTCCA+TGG 0.466974 7.3:-12400503 None:intergenic
GCTGATAGACCTTCGTATGA+TGG 0.469002 7.3:+12400324 MS.gene20234:CDS
GAACTTTGCATTACAATGCC+TGG 0.474338 7.3:-12401327 None:intergenic
TGTTCTTGAGTGGCATCTCA+TGG 0.484881 7.3:-12401943 None:intergenic
AATCAGAATGAAAGGAATGA+AGG 0.486904 7.3:+12400600 MS.gene20234:CDS
GGAAGGAAGCAAAGGATTTG+AGG 0.487549 7.3:+12400704 MS.gene20234:CDS
AAAGTTGAAAGATCATTAGA+TGG 0.489403 7.3:+12400444 MS.gene20234:CDS
AAAATTCTTGTGGTCTAAGT+GGG 0.492248 7.3:+12400673 MS.gene20234:CDS
AGGTCTATCAGCATTATTTG+TGG 0.494075 7.3:-12400313 None:intergenic
ATATGGGCAGAAGGTGGTGA+AGG 0.494098 7.3:+12401392 MS.gene20234:CDS
GAGGAAGGTTTAGTAGAGCC+AGG 0.508048 7.3:+12401309 MS.gene20234:CDS
GCTTTCGCTGGAGGAAATAT+GGG 0.508332 7.3:+12401376 MS.gene20234:CDS
GTGCACTTGTAGTAACTTCG+AGG 0.512042 7.3:-12400396 None:intergenic
ATGGTTAAGATGCTGGGGAT+TGG 0.515953 7.3:-12400160 None:intergenic
AGAAGATGCAATTGGAGGAG+TGG 0.518935 7.3:-12398994 None:intergenic
GATTCTGAAGTCCTTGGAGA+TGG 0.520543 7.3:+12401354 MS.gene20234:CDS
ACAGACAACTGTATCTCTCT+TGG 0.520560 7.3:+12399460 MS.gene20234:CDS
AGGAATGATTTCTGATGGAA+TGG 0.520627 7.3:+12400548 MS.gene20234:CDS
CTAAGTGGGGAATGTGAGGA+AGG 0.529724 7.3:+12400687 MS.gene20234:CDS
TCTTTCTCAGAGCTTCTAGC+AGG 0.530251 7.3:+12398960 MS.gene20234:CDS
TCATTTGTGACTACATATGA+AGG 0.531295 7.3:+12401911 MS.gene20234:CDS
GTTGTCATGGTTAAGATGCT+GGG 0.534264 7.3:-12400166 None:intergenic
GTTTGAGAAGATGCAATTGG+AGG 0.534896 7.3:-12398999 None:intergenic
GTGGCCTGATATGTTTCTGT+AGG 0.540476 7.3:-12400234 None:intergenic
CATTGTAATGCAAAGTTCTG+TGG 0.543269 7.3:+12401332 MS.gene20234:CDS
TCTGTGGATTCTGAAGTCCT+TGG 0.545629 7.3:+12401348 MS.gene20234:CDS
ACAACATCAAAAGCGAAACT+CGG 0.546405 7.3:+12400515 MS.gene20234:CDS
CAACATCAAAAGCGAAACTC+GGG 0.546522 7.3:+12400516 MS.gene20234:CDS
TGGTCCTCCTCCATGTTCTG+TGG 0.546595 7.3:-12400276 None:intergenic
ATAATAGTAATCAGAATGAA+AGG 0.547394 7.3:+12400592 MS.gene20234:CDS
TGAGAATCAATCAAATGAAG+TGG 0.547618 7.3:+12401278 MS.gene20234:CDS
ATTGTTGTTGTGTTCTTGAG+TGG 0.548207 7.3:-12401953 None:intergenic
TTGGAGATGGCTTTCGCTGG+AGG 0.549285 7.3:+12401367 MS.gene20234:CDS
TTGGTCTCCATTGATTTCTG+TGG 0.552337 7.3:-12400141 None:intergenic
CCTGATATGTTTCTGTAGGA+AGG 0.552344 7.3:-12400230 None:intergenic
TACGATGGCACCACAGAACA+TGG 0.559539 7.3:+12400266 MS.gene20234:CDS
TGTTAGCTCTAAAGTTGTCA+TGG 0.561387 7.3:-12400179 None:intergenic
GCCACAACCACAGAAATCAA+TGG 0.564697 7.3:+12400134 MS.gene20234:CDS
CTATCAGCATTATTTGTGGA+TGG 0.565274 7.3:-12400309 None:intergenic
TTTGCTCTAGAAAATTCTTG+TGG 0.572340 7.3:+12400663 MS.gene20234:CDS
ACATCAGGAATGATTTCTGA+TGG 0.574578 7.3:+12400543 MS.gene20234:CDS
ACTGAATGTTCACCTGAGAA+GGG 0.576092 7.3:-12399079 None:intergenic
CTGATATGTTTCTGTAGGAA+GGG 0.576441 7.3:-12400229 None:intergenic
AAGCAAAGGATTTGAGGCAG+AGG 0.578305 7.3:+12400710 MS.gene20234:CDS
TGTATCTCTCTTGGCAAACA+TGG 0.578873 7.3:+12399469 MS.gene20234:CDS
AAATGAAGTGGCAGTATCAG+AGG 0.580061 7.3:+12401290 MS.gene20234:CDS
ATCTCTCATTTACAAACCAA+TGG 0.583964 7.3:+12399424 MS.gene20234:CDS
ACTTAGCAGCTCTTCTGACA+TGG 0.600508 7.3:+12399379 MS.gene20234:CDS
ATGACCCTAGAAGTAAAAGA+AGG 0.603029 7.3:+12400736 MS.gene20234:CDS
CTGGAGGAAATATGGGCAGA+AGG 0.603595 7.3:+12401383 MS.gene20234:CDS
GGCCACAGAATCTTGTACGA+TGG 0.604701 7.3:+12400251 MS.gene20234:CDS
CTGCAATGTTCGCAAGCACG+TGG 0.606464 7.3:+12401865 MS.gene20234:CDS
TGAAGGGAAATCCATATCCC+AGG 0.606812 7.3:+12401409 MS.gene20234:CDS
CACTGTCTTTGGCCTAATGG+CGG 0.608617 7.3:-12399030 None:intergenic
TATGGGCAGAAGGTGGTGAA+GGG 0.615897 7.3:+12401393 MS.gene20234:CDS
GAATGTGAGGAAGGAAGCAA+AGG 0.620452 7.3:+12400696 MS.gene20234:CDS
TGCCATCGTACAAGATTCTG+TGG 0.625393 7.3:-12400253 None:intergenic
CTGAATGTTCACCTGAGAAG+GGG 0.625898 7.3:-12399078 None:intergenic
GGCACCACAGAACATGGAGG+AGG 0.626068 7.3:+12400272 MS.gene20234:CDS
TTGTCATGGTTAAGATGCTG+GGG 0.628493 7.3:-12400165 None:intergenic
TCCAGCGAAAGCCATCTCCA+AGG 0.633371 7.3:-12401365 None:intergenic
GAAGTGGCAGTATCAGAGGA+AGG 0.639135 7.3:+12401294 MS.gene20234:CDS
TATAAAGGTGAACACAACCA+TGG 0.664705 7.3:+12400486 MS.gene20234:CDS
GAGGAAATATGGGCAGAAGG+TGG 0.666250 7.3:+12401386 MS.gene20234:CDS
TGGTCTAAGTGGGGAATGTG+AGG 0.674654 7.3:+12400683 MS.gene20234:CDS
AAATTCTTGTGGTCTAAGTG+GGG 0.680578 7.3:+12400674 MS.gene20234:CDS
GATTTGTATGAAGAACAAGT+AGG 0.690839 7.3:-12398939 None:intergenic
CAGTTATATCCATCATACGA+AGG 0.693969 7.3:-12400333 None:intergenic
CCATTAGGCCAAAGACAGTG+AGG 0.725022 7.3:+12399033 MS.gene20234:CDS
GATGGCACCACAGAACATGG+AGG 0.771341 7.3:+12400269 MS.gene20234:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATGAAAAC+TGG - chr7.3:12401007-12401026 None:intergenic 10.0%
!!! CATGATAAATTTTTAATTAA+AGG + chr7.3:12401217-12401236 MS.gene20234:intron 10.0%
!!! GATTTTTAATTTTAATTCAT+TGG + chr7.3:12401096-12401115 MS.gene20234:intron 10.0%
!! TTTATCATGAAAAATTAGTT+AGG - chr7.3:12401206-12401225 None:intergenic 15.0%
!!! GTTTCTTTTTATTTATTTTC+AGG - chr7.3:12400786-12400805 None:intergenic 15.0%
!! AAGATTAACATTATATGTGA+GGG + chr7.3:12399704-12399723 MS.gene20234:intron 20.0%
!! AGTATAAAGAAAAAGATACT+AGG - chr7.3:12401773-12401792 None:intergenic 20.0%
!! ATAATAGTAATCAGAATGAA+AGG + chr7.3:12400592-12400611 MS.gene20234:CDS 20.0%
!! ATATAAACGATGTTTATAAG+TGG + chr7.3:12399896-12399915 MS.gene20234:intron 20.0%
!! ATTGCAGAAATTGTTTATAA+AGG + chr7.3:12400471-12400490 MS.gene20234:CDS 20.0%
!! GTAACATATTAGTGATTATA+AGG + chr7.3:12401178-12401197 MS.gene20234:intron 20.0%
!! TATAAACGATGTTTATAAGT+GGG + chr7.3:12399897-12399916 MS.gene20234:intron 20.0%
!! TATTTGTGACATAATTTCTT+CGG + chr7.3:12401120-12401139 MS.gene20234:intron 20.0%
!! TTAAAAGTTTCTCATTCTTT+AGG + chr7.3:12401250-12401269 MS.gene20234:intron 20.0%
!! TTATAATTTCAGAGACAAAA+AGG - chr7.3:12401618-12401637 None:intergenic 20.0%
!!! AAACCTATCATAGATTTTTT+TGG + chr7.3:12399795-12399814 MS.gene20234:intron 20.0%
!!! AACTTAACTGATAAATGTTT+TGG - chr7.3:12401649-12401668 None:intergenic 20.0%
!!! CAATGTTTTAAAAACCAAAT+CGG - chr7.3:12399279-12399298 None:intergenic 20.0%
!!! TACTATTTTAAAATGCTTCT+TGG + chr7.3:12399302-12399321 MS.gene20234:intron 20.0%
! AAAGTTGAAAGATCATTAGA+TGG + chr7.3:12400444-12400463 MS.gene20234:CDS 25.0%
! AATGATGAGTTTATTCAGAA+AGG + chr7.3:12399633-12399652 MS.gene20234:intron 25.0%
! ACAAACGAAGGATTATATAT+AGG - chr7.3:12399587-12399606 None:intergenic 25.0%
! AGTTAAGTTCAATTGTTAGA+TGG + chr7.3:12401660-12401679 MS.gene20234:intron 25.0%
! ATAAACGATGTTTATAAGTG+GGG + chr7.3:12399898-12399917 MS.gene20234:intron 25.0%
! ATCACTAATATGTTACTGTA+TGG - chr7.3:12401174-12401193 None:intergenic 25.0%
! ATTTGCAATGTTTCAAAAAC+TGG + chr7.3:12400882-12400901 MS.gene20234:intron 25.0%
! CAAGATTAACATTATATGTG+AGG + chr7.3:12399703-12399722 MS.gene20234:intron 25.0%
! TTAGCTTATAGAGTTAAGTT+GGG + chr7.3:12399744-12399763 MS.gene20234:intron 25.0%
! TTTGTAAATGAGAGATTGAT+TGG - chr7.3:12399420-12399439 None:intergenic 25.0%
!! AAGAAGAAAAGTATAAACCT+GGG - chr7.3:12401429-12401448 None:intergenic 25.0%
!! AATAACCTTCTTTTACTTCT+AGG - chr7.3:12400744-12400763 None:intergenic 25.0%
!! ATAACCTTCTTTTACTTCTA+GGG - chr7.3:12400743-12400762 None:intergenic 25.0%
!! ATTAGCTTATAGAGTTAAGT+TGG + chr7.3:12399743-12399762 MS.gene20234:intron 25.0%
!! CAAAAATATTAGCCTGTAAT+TGG - chr7.3:12399352-12399371 None:intergenic 25.0%
!! CAATTACAGGCTAATATTTT+TGG + chr7.3:12399350-12399369 MS.gene20234:intron 25.0%
!! CTTTCAACTTTCTTTTTAAC+TGG - chr7.3:12400435-12400454 None:intergenic 25.0%
!! TACCTCTTTTTATCTTCTTT+TGG + chr7.3:12400086-12400105 MS.gene20234:intron 25.0%
!! TATGTAGTCACAAATGATTT+TGG - chr7.3:12401908-12401927 None:intergenic 25.0%
!! TTAGGTACTAATTTTACAGA+TGG - chr7.3:12401581-12401600 None:intergenic 25.0%
!!! GTTTTTAAAACACTGCATTA+TGG - chr7.3:12399113-12399132 None:intergenic 25.0%
!!! TTCTTTTTAACTGGACAATT+AGG - chr7.3:12400426-12400445 None:intergenic 25.0%
!!! TTGTCTCTGAAATTATAACA+TGG + chr7.3:12401620-12401639 MS.gene20234:intron 25.0%
!!! TTTTATCTTCTTTTGGAGAA+GGG + chr7.3:12400093-12400112 MS.gene20234:intron 25.0%
!!! TTTTCTAGAGCAAAATCATT+AGG - chr7.3:12400657-12400676 None:intergenic 25.0%
!!! TTTTTATCTTCTTTTGGAGA+AGG + chr7.3:12400092-12400111 MS.gene20234:intron 25.0%
AAAATTCTTGTGGTCTAAGT+GGG + chr7.3:12400673-12400692 MS.gene20234:CDS 30.0%
AATCAGAATGAAAGGAATGA+AGG + chr7.3:12400600-12400619 MS.gene20234:CDS 30.0%
ACGAAAAAGATTACAAACGA+AGG - chr7.3:12399599-12399618 None:intergenic 30.0%
AGAAAGGTTATTCTTCATAG+TGG + chr7.3:12399649-12399668 MS.gene20234:intron 30.0%
AGTCACTAACACAAATATAG+CGG - chr7.3:12400009-12400028 None:intergenic 30.0%
ATCTCTCATTTACAAACCAA+TGG + chr7.3:12399424-12399443 MS.gene20234:CDS 30.0%
CTCCAAAAGAAGATAAAAAG+AGG - chr7.3:12400091-12400110 None:intergenic 30.0%
GAATGGTTCAAGATAAAGTA+TGG + chr7.3:12400565-12400584 MS.gene20234:CDS 30.0%
GATTTGTATGAAGAACAAGT+AGG - chr7.3:12398942-12398961 None:intergenic 30.0%
GGATATAACTGGAGAAAATA+TGG + chr7.3:12400345-12400364 MS.gene20234:CDS 30.0%
GGTCCAAAAAAATCTATGAT+AGG - chr7.3:12399801-12399820 None:intergenic 30.0%
TAAACGATGTTTATAAGTGG+GGG + chr7.3:12399899-12399918 MS.gene20234:intron 30.0%
TAAACTCATCATTGATCACT+TGG - chr7.3:12399626-12399645 None:intergenic 30.0%
TCAAGATTACTTATACAGCA+AGG + chr7.3:12401484-12401503 MS.gene20234:intron 30.0%
TCAATGAAACATCCAAATCA+TGG - chr7.3:12401061-12401080 None:intergenic 30.0%
TCATTTGTGACTACATATGA+AGG + chr7.3:12401911-12401930 MS.gene20234:CDS 30.0%
TGAGAATCAATCAAATGAAG+TGG + chr7.3:12401278-12401297 MS.gene20234:CDS 30.0%
TGGAAATTTCCGTTAGAATT+TGG - chr7.3:12399975-12399994 None:intergenic 30.0%
TTCTAAATTCTGCTATGCAT+CGG + chr7.3:12401507-12401526 MS.gene20234:intron 30.0%
! AAAAGTATAAACCTGGGATA+TGG - chr7.3:12401423-12401442 None:intergenic 30.0%
! AAGGCTAATTTGCAAAAGTT+AGG - chr7.3:12401599-12401618 None:intergenic 30.0%
! GAAGAAGAAAAGTATAAACC+TGG - chr7.3:12401430-12401449 None:intergenic 30.0%
!! GTTGTGTTTTTACCAATTAC+AGG + chr7.3:12399337-12399356 MS.gene20234:intron 30.0%
!! TCTCTTTTCAATTTGAGACT+TGG + chr7.3:12400048-12400067 MS.gene20234:intron 30.0%
!! TTTGCTCTAGAAAATTCTTG+TGG + chr7.3:12400663-12400682 MS.gene20234:CDS 30.0%
!!! AGTCATTGAATCTTTTTCAG+AGG - chr7.3:12401981-12402000 None:intergenic 30.0%
!!! ATATAGCGGATGATGTTTTT+TGG - chr7.3:12399995-12400014 None:intergenic 30.0%
!!! TTACAGGCTAATATTTTTGG+AGG + chr7.3:12399353-12399372 MS.gene20234:intron 30.0%
AAACGATGTTTATAAGTGGG+GGG + chr7.3:12399900-12399919 MS.gene20234:intron 35.0%
AAACTACAATATCCGCCATT+AGG + chr7.3:12399018-12399037 MS.gene20234:CDS 35.0%
AAATAACCACACCGTAGTAA+TGG - chr7.3:12399173-12399192 None:intergenic 35.0%
AAATTCTTGTGGTCTAAGTG+GGG + chr7.3:12400674-12400693 MS.gene20234:CDS 35.0%
ACAACATCAAAAGCGAAACT+CGG + chr7.3:12400515-12400534 MS.gene20234:CDS 35.0%
ACAGAGAAGAAAAACACACT+AGG + chr7.3:12400804-12400823 MS.gene20234:intron 35.0%
ACATCAGGAATGATTTCTGA+TGG + chr7.3:12400543-12400562 MS.gene20234:CDS 35.0%
AGATTGATTGGTATCAGGTT+TGG - chr7.3:12399408-12399427 None:intergenic 35.0%
AGGAATGATTTCTGATGGAA+TGG + chr7.3:12400548-12400567 MS.gene20234:CDS 35.0%
AGGTCTATCAGCATTATTTG+TGG - chr7.3:12400316-12400335 None:intergenic 35.0%
ATCAGTTGGAACTTTCAGTT+CGG - chr7.3:12399135-12399154 None:intergenic 35.0%
ATGACCCTAGAAGTAAAAGA+AGG + chr7.3:12400736-12400755 MS.gene20234:CDS 35.0%
ATGAGAGATTGATTGGTATC+AGG - chr7.3:12399413-12399432 None:intergenic 35.0%
CAAAATATCGAGTACATAGG+CGG + chr7.3:12401532-12401551 MS.gene20234:intron 35.0%
CAGTTATATCCATCATACGA+AGG - chr7.3:12400336-12400355 None:intergenic 35.0%
CATTGTAATGCAAAGTTCTG+TGG + chr7.3:12401332-12401351 MS.gene20234:CDS 35.0%
CTATCAGCATTATTTGTGGA+TGG - chr7.3:12400312-12400331 None:intergenic 35.0%
GAAAATTCTTGTGGTCTAAG+TGG + chr7.3:12400672-12400691 MS.gene20234:CDS 35.0%
GATTGATTGGTATCAGGTTT+GGG - chr7.3:12399407-12399426 None:intergenic 35.0%
GTAGTTTGAGAAGATGCAAT+TGG - chr7.3:12399005-12399024 None:intergenic 35.0%
TATAAAGGTGAACACAACCA+TGG + chr7.3:12400486-12400505 MS.gene20234:CDS 35.0%
TATGGACAGAAGCAAGTAAA+AGG + chr7.3:12400363-12400382 MS.gene20234:CDS 35.0%
TTACAGATGGCTACAATTTC+AGG - chr7.3:12401568-12401587 None:intergenic 35.0%
TTTCCGTTAGAATTTGGTCT+TGG - chr7.3:12399969-12399988 None:intergenic 35.0%
! ATTGTTGTTGTGTTCTTGAG+TGG - chr7.3:12401956-12401975 None:intergenic 35.0%
! CTGATATGTTTCTGTAGGAA+GGG - chr7.3:12400232-12400251 None:intergenic 35.0%
! GCCTATGTACTCGATATTTT+GGG - chr7.3:12401533-12401552 None:intergenic 35.0%
! TGTGACACAAATTTTGCCAT+TGG - chr7.3:12399443-12399462 None:intergenic 35.0%
! TTACTACGGTGTGGTTATTT+TGG + chr7.3:12399173-12399192 MS.gene20234:intron 35.0%
!! CTTCGTATGATGGATATAAC+TGG + chr7.3:12400334-12400353 MS.gene20234:CDS 35.0%
!! TGTTAGCTCTAAAGTTGTCA+TGG - chr7.3:12400182-12400201 None:intergenic 35.0%
!! TTGTGGATGGTAATGCTTTT+TGG - chr7.3:12400299-12400318 None:intergenic 35.0%
!! TTTGATGTTGTTGCTTTCCA+TGG - chr7.3:12400506-12400525 None:intergenic 35.0%
!!! TCATAGTGGATGTTTTGAGA+TGG + chr7.3:12399663-12399682 MS.gene20234:intron 35.0%
AAATGAAGTGGCAGTATCAG+AGG + chr7.3:12401290-12401309 MS.gene20234:CDS 40.0%
AACGAAACCAATCAACGAAC+TGG - chr7.3:12400938-12400957 None:intergenic 40.0%
ACAGACAACTGTATCTCTCT+TGG + chr7.3:12399460-12399479 MS.gene20234:CDS 40.0%
ACTGAATGTTCACCTGAGAA+GGG - chr7.3:12399082-12399101 None:intergenic 40.0%
AGTTGTCATGGTTAAGATGC+TGG - chr7.3:12400170-12400189 None:intergenic 40.0%
CAACATCAAAAGCGAAACTC+GGG + chr7.3:12400516-12400535 MS.gene20234:CDS 40.0%
CAACCAGACTATAGTATACC+CGG - chr7.3:12400961-12400980 None:intergenic 40.0%
CATCCAAATCATGGTTGAAC+TGG - chr7.3:12401052-12401071 None:intergenic 40.0%
CATCCAGTTCAACCATGATT+TGG + chr7.3:12401046-12401065 MS.gene20234:intron 40.0%
CCAACTGATTGAACCTTGAA+CGG + chr7.3:12399146-12399165 MS.gene20234:intron 40.0%
CCTTCCTACAGAAACATATC+AGG + chr7.3:12400230-12400249 MS.gene20234:CDS 40.0%
CTTAACCTCAGAAGTTAGCT+CGG - chr7.3:12399940-12399959 None:intergenic 40.0%
GAACTTTGCATTACAATGCC+TGG - chr7.3:12401330-12401349 None:intergenic 40.0%
GCCCAAAATATCGAGTACAT+AGG + chr7.3:12401529-12401548 MS.gene20234:intron 40.0%
GCTCCAAGACCAAATTCTAA+CGG + chr7.3:12399963-12399982 MS.gene20234:intron 40.0%
GTTGTCATGGTTAAGATGCT+GGG - chr7.3:12400169-12400188 None:intergenic 40.0%
GTTTGAGAAGATGCAATTGG+AGG - chr7.3:12399002-12399021 None:intergenic 40.0%
TGACACATTGAATGAAGACG+CGG + chr7.3:12401690-12401709 MS.gene20234:intron 40.0%
TGTATCTCTCTTGGCAAACA+TGG + chr7.3:12399469-12399488 MS.gene20234:CDS 40.0%
TTAACCTCAGAAGTTAGCTC+GGG - chr7.3:12399939-12399958 None:intergenic 40.0%
TTGTCATGGTTAAGATGCTG+GGG - chr7.3:12400168-12400187 None:intergenic 40.0%
! CCTGATATGTTTCTGTAGGA+AGG - chr7.3:12400233-12400252 None:intergenic 40.0%
! CGCCTATGTACTCGATATTT+TGG - chr7.3:12401534-12401553 None:intergenic 40.0%
! TTTACGCTCCAGATGTGTTT+TGG + chr7.3:12399847-12399866 MS.gene20234:intron 40.0%
!! TCCATTGATTTCTGTGGTTG+TGG - chr7.3:12400138-12400157 None:intergenic 40.0%
!! TGTTTTGGACGTGAGCATAT+TGG + chr7.3:12399862-12399881 MS.gene20234:intron 40.0%
!! TTCGTTGATTGGTTTCGTTC+CGG + chr7.3:12400939-12400958 MS.gene20234:intron 40.0%
!! TTGGTCTCCATTGATTTCTG+TGG - chr7.3:12400144-12400163 None:intergenic 40.0%
!!! TAGTTTTGTCTCGATTCGAG+CGG + chr7.3:12399207-12399226 MS.gene20234:intron 40.0%
AAACCAATCAACGAACTGGC+TGG - chr7.3:12400934-12400953 None:intergenic 45.0%
AACGAATATCTCCCCTTCTC+AGG + chr7.3:12399067-12399086 MS.gene20234:CDS 45.0%
ACTTAGCAGCTCTTCTGACA+TGG + chr7.3:12399379-12399398 MS.gene20234:CDS 45.0%
AGAAGATGCAATTGGAGGAG+TGG - chr7.3:12398997-12399016 None:intergenic 45.0%
AGAAGTTAGCTCGGGAGTAA+GGG - chr7.3:12399931-12399950 None:intergenic 45.0%
ATGGTTAAGATGCTGGGGAT+TGG - chr7.3:12400163-12400182 None:intergenic 45.0%
CACTGAATGTTCACCTGAGA+AGG - chr7.3:12399083-12399102 None:intergenic 45.0%
CATGCCTAAACATCTGCATG+AGG - chr7.3:12399822-12399841 None:intergenic 45.0%
CCGTTCAAGGTTCAATCAGT+TGG - chr7.3:12399149-12399168 None:intergenic 45.0%
CCTTGAACGGACCATTACTA+CGG + chr7.3:12399159-12399178 MS.gene20234:intron 45.0%
CTGAATGTTCACCTGAGAAG+GGG - chr7.3:12399081-12399100 None:intergenic 45.0%
GAATGTGAGGAAGGAAGCAA+AGG + chr7.3:12400696-12400715 MS.gene20234:CDS 45.0%
GCCACAACCACAGAAATCAA+TGG + chr7.3:12400134-12400153 MS.gene20234:CDS 45.0%
GCTGATAGACCTTCGTATGA+TGG + chr7.3:12400324-12400343 MS.gene20234:CDS 45.0%
GCTTTCGCTGGAGGAAATAT+GGG + chr7.3:12401376-12401395 MS.gene20234:CDS 45.0%
GGAAGGAAGCAAAGGATTTG+AGG + chr7.3:12400704-12400723 MS.gene20234:CDS 45.0%
GTGCACTTGTAGTAACTTCG+AGG - chr7.3:12400399-12400418 None:intergenic 45.0%
GTTCCGGGTATACTATAGTC+TGG + chr7.3:12400955-12400974 MS.gene20234:intron 45.0%
TCTTTCTCAGAGCTTCTAGC+AGG + chr7.3:12398960-12398979 MS.gene20234:CDS 45.0%
TGAAGGGAAATCCATATCCC+AGG + chr7.3:12401409-12401428 MS.gene20234:CDS 45.0%
TGCCATCGTACAAGATTCTG+TGG - chr7.3:12400256-12400275 None:intergenic 45.0%
TGGACCTCATGCAGATGTTT+AGG + chr7.3:12399815-12399834 MS.gene20234:intron 45.0%
TGTTCTTGAGTGGCATCTCA+TGG - chr7.3:12401946-12401965 None:intergenic 45.0%
TTGCCAAACCAGTTGCTTCA+AGG + chr7.3:12398916-12398935 MS.gene20234:CDS 45.0%
! AAGCAAAGGATTTGAGGCAG+AGG + chr7.3:12400710-12400729 MS.gene20234:CDS 45.0%
! CACGGTTGAAGCTGTCTTTT+TGG - chr7.3:12400909-12400928 None:intergenic 45.0%
! GTGGCCTGATATGTTTCTGT+AGG - chr7.3:12400237-12400256 None:intergenic 45.0%
! TCGATTCGAGCGGTTTAAGA+CGG + chr7.3:12399217-12399236 MS.gene20234:intron 45.0%
!! GATTCTGAAGTCCTTGGAGA+TGG + chr7.3:12401354-12401373 MS.gene20234:CDS 45.0%
!! TCGTTGATTGGTTTCGTTCC+GGG + chr7.3:12400940-12400959 MS.gene20234:intron 45.0%
!! TCTGTGGATTCTGAAGTCCT+TGG + chr7.3:12401348-12401367 MS.gene20234:CDS 45.0%
!!! CTACGGTGTGGTTATTTTGG+CGG + chr7.3:12399176-12399195 MS.gene20234:intron 45.0%
!! AATGAATTAAAATTAAAAAT+CGG - chr7.3:12401097-12401116 None:intergenic 5.0%
AACGGACCATTACTACGGTG+TGG + chr7.3:12399164-12399183 MS.gene20234:intron 50.0%
ACGGTTGAATCATGACCCAG+AGG + chr7.3:12399236-12399255 MS.gene20234:intron 50.0%
AGGCCTTGAAGCAACTGGTT+TGG - chr7.3:12398922-12398941 None:intergenic 50.0%
ATATGGGCAGAAGGTGGTGA+AGG + chr7.3:12401392-12401411 MS.gene20234:CDS 50.0%
CAAGTAGGCCTTGAAGCAAC+TGG - chr7.3:12398927-12398946 None:intergenic 50.0%
CACTGTCTTTGGCCTAATGG+CGG - chr7.3:12399033-12399052 None:intergenic 50.0%
CAGAAGTTAGCTCGGGAGTA+AGG - chr7.3:12399932-12399951 None:intergenic 50.0%
CCATTAGGCCAAAGACAGTG+AGG + chr7.3:12399033-12399052 MS.gene20234:CDS 50.0%
CCGTAGTAATGGTCCGTTCA+AGG - chr7.3:12399162-12399181 None:intergenic 50.0%
CCTCACTGTCTTTGGCCTAA+TGG - chr7.3:12399036-12399055 None:intergenic 50.0%
CTAAGTGGGGAATGTGAGGA+AGG + chr7.3:12400687-12400706 MS.gene20234:CDS 50.0%
CTGGAGGAAATATGGGCAGA+AGG + chr7.3:12401383-12401402 MS.gene20234:CDS 50.0%
GAACCAGCCAGTTCGTTGAT+TGG + chr7.3:12400928-12400947 MS.gene20234:intron 50.0%
GAAGGGGAGATATTCGTTGC+TGG - chr7.3:12399065-12399084 None:intergenic 50.0%
GAAGTGGCAGTATCAGAGGA+AGG + chr7.3:12401294-12401313 MS.gene20234:CDS 50.0%
GAGGAAATATGGGCAGAAGG+TGG + chr7.3:12401386-12401405 MS.gene20234:CDS 50.0%
GAGGAAGGTTTAGTAGAGCC+AGG + chr7.3:12401309-12401328 MS.gene20234:CDS 50.0%
GCTCACGTCCAAAACACATC+TGG - chr7.3:12399858-12399877 None:intergenic 50.0%
GGCCACAGAATCTTGTACGA+TGG + chr7.3:12400251-12400270 MS.gene20234:CDS 50.0%
GGCTTGAACCTCACTGTCTT+TGG - chr7.3:12399044-12399063 None:intergenic 50.0%
GGCTTTCGCTGGAGGAAATA+TGG + chr7.3:12401375-12401394 MS.gene20234:CDS 50.0%
TACGATGGCACCACAGAACA+TGG + chr7.3:12400266-12400285 MS.gene20234:CDS 50.0%
TACTCCCGAGCTAACTTCTG+AGG + chr7.3:12399932-12399951 MS.gene20234:intron 50.0%
TATGGGCAGAAGGTGGTGAA+GGG + chr7.3:12401393-12401412 MS.gene20234:CDS 50.0%
TGGTCTAAGTGGGGAATGTG+AGG + chr7.3:12400683-12400702 MS.gene20234:CDS 50.0%
! TCAACGAACTGGCTGGTTCA+CGG - chr7.3:12400927-12400946 None:intergenic 50.0%
ATCGAACCAGCGTGACCTCT+GGG - chr7.3:12399254-12399273 None:intergenic 55.0%
CGAAACTCGGGAGCAACATC+AGG + chr7.3:12400528-12400547 MS.gene20234:CDS 55.0%
CTGCAATGTTCGCAAGCACG+TGG + chr7.3:12401865-12401884 MS.gene20234:CDS 55.0%
GATGGCACCACAGAACATGG+AGG + chr7.3:12400269-12400288 MS.gene20234:CDS 55.0%
TCCAGCGAAAGCCATCTCCA+AGG - chr7.3:12401368-12401387 None:intergenic 55.0%
TCCTTGGAGATGGCTTTCGC+TGG + chr7.3:12401364-12401383 MS.gene20234:CDS 55.0%
TGGTCCTCCTCCATGTTCTG+TGG - chr7.3:12400279-12400298 None:intergenic 55.0%
TTGGAGATGGCTTTCGCTGG+AGG + chr7.3:12401367-12401386 MS.gene20234:CDS 55.0%
!! CGCTGGTTCGATGTCCGATT+TGG + chr7.3:12399262-12399281 MS.gene20234:intron 55.0%
CATCGAACCAGCGTGACCTC+TGG - chr7.3:12399255-12399274 None:intergenic 60.0%
GGCACCACAGAACATGGAGG+AGG + chr7.3:12400272-12400291 MS.gene20234:CDS 60.0%
TCATGACCCAGAGGTCACGC+TGG + chr7.3:12399245-12399264 MS.gene20234:intron 60.0%
TGAAGACGCGGCGCTTGATG+TGG + chr7.3:12401702-12401721 MS.gene20234:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 12398885 12402012 12398885 ID=MS.gene20234
chr7.3 mRNA 12398885 12402012 12398885 ID=MS.gene20234.t1;Parent=MS.gene20234
chr7.3 exon 12398885 12399088 12398885 ID=MS.gene20234.t1.exon1;Parent=MS.gene20234.t1
chr7.3 CDS 12398885 12399088 12398885 ID=cds.MS.gene20234.t1;Parent=MS.gene20234.t1
chr7.3 exon 12399359 12399490 12399359 ID=MS.gene20234.t1.exon2;Parent=MS.gene20234.t1
chr7.3 CDS 12399359 12399490 12399359 ID=cds.MS.gene20234.t1;Parent=MS.gene20234.t1
chr7.3 exon 12400114 12400757 12400114 ID=MS.gene20234.t1.exon3;Parent=MS.gene20234.t1
chr7.3 CDS 12400114 12400757 12400114 ID=cds.MS.gene20234.t1;Parent=MS.gene20234.t1
chr7.3 exon 12401272 12401430 12401272 ID=MS.gene20234.t1.exon4;Parent=MS.gene20234.t1
chr7.3 CDS 12401272 12401430 12401272 ID=cds.MS.gene20234.t1;Parent=MS.gene20234.t1
chr7.3 exon 12401838 12402012 12401838 ID=MS.gene20234.t1.exon5;Parent=MS.gene20234.t1
chr7.3 CDS 12401838 12402012 12401838 ID=cds.MS.gene20234.t1;Parent=MS.gene20234.t1
Gene Sequence

>MS.gene20234

ATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCATACAAATCTTTCTCAGAGCTTCTAGCAGGCGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAACGAATATCTCCCCTTCTCAGGTGAACATTCAGTGCAACATACCATAATGCAGTGTTTTAAAAACCGAACTGAAAGTTCCAACTGATTGAACCTTGAACGGACCATTACTACGGTGTGGTTATTTTGGCGGTTCGATTTTAGTTTTGTCTCGATTCGAGCGGTTTAAGACGGTTGAATCATGACCCAGAGGTCACGCTGGTTCGATGTCCGATTTGGTTTTTAAAACATTGTCATACTATTTTAAAATGCTTCTTGGTTTCTAACAAATGTTGTGTTTTTACCAATTACAGGCTAATATTTTTGGAGGTGCACTTAGCAGCTCTTCTGACATGGATCCCAAACCTGATACCAATCAATCTCTCATTTACAAACCAATGGCAAAATTTGTGTCACAGACAACTGTATCTCTCTTGGCAAACATGGTCAGTATCTACACACACATATATCACAGTTTTTTCTCTCATGCATATAAGTTTGCTCAGTTAGTTTTATTTCTGTTATATTTTGTTATTCATCCTATATATAATCCTTCGTTTGTAATCTTTTTCGTTCAACCAAGTGATCAATGATGAGTTTATTCAGAAAGGTTATTCTTCATAGTGGATGTTTTGAGATGGTTGAGAGTCATATTAAGCAAGATTAACATTATATGTGAGGGCAACTCGCATAATATCATTAGCTTATAGAGTTAAGTTGGGTCTAAATCAAAATTCTAATATGTTATCAAAACCTATCATAGATTTTTTTGGACCTCATGCAGATGTTTAGGCATGCAAACTTTACGCTCCAGATGTGTTTTGGACGTGAGCATATTGGTTAGTGCAATGATATAAACGATGTTTATAAGTGGGGGGACAAACCCTTACTCCCGAGCTAACTTCTGAGGTTAAGTTAGCTCCAAGACCAAATTCTAACGGAAATTTCCAAAAAACATCATCCGCTATATTTGTGTTAGTGACTATAAGAATTTCAGACTTTATCTCTTTTCAATTTGAGACTTGGATTTTTCTTGATACTTACCTCTTTTTATCTTCTTTTGGAGAAGGGAATTTGCAGTACTAATCAGCCACAACCACAGAAATCAATGGAGACCAATCCCCAGCATCTTAACCATGACAACTTTAGAGCTAACACGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTACGATGGCACCACAGAACATGGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCGTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTACTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCAACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGAATGATTTCTGATGGAATGGTTCAAGATAAAGTATGGAGTAATAATAGTAATCAGAATGAAAGGAATGAAGGAAGAATAGATAATCAAGTCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACCCTAGAAGTAAAAGAAGGTTATTTTTTTTATTAAATCTATAACCTGAAAATAAATAAAAAGAAACAGAGAAGAAAAACACACTAGGAAAATGAAATTTATACACAATTGCTGCATGAGTTTGCAATATATAACTTCATATTATTTGCAATGTTTCAAAAACTGGACCAAAAAGACAGCTTCAACCGTGAACCAGCCAGTTCGTTGATTGGTTTCGTTCCGGGTATACTATAGTCTGGTTGAAGCATATTAAAATAGAGTTGAACCAGTTTTCATTTTTTTTTTTTTGTTTATTTTTAATTTGTGTCATCCAGTTCAACCATGATTTGGATGTTTCATTGATTCAATCTCTTGTCCGATTTTTAATTTTAATTCATTGGTTATTTGTGACATAATTTCTTCGGCATTAAGTCAATTAAGTTTGCGCATTGTCCATACAGTAACATATTAGTGATTATAAGGTACCTAACTAATTTTTCATGATAAATTTTTAATTAAAGGATAACTTATGTTAAAAGTTTCTCATTCTTTAGGAAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTTTAGTAGAGCCAGGCATTGTAATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGGTTTATACTTTTCTTCTTCAAAGTAACTTTTATAAATGAGCTGTTTCAAGATTTCAAGATTACTTATACAGCAAGGTTCTAAATTCTGCTATGCATCGGCCCAAAATATCGAGTACATAGGCGGCAATTTCGTACCTGAAATTGTAGCCATCTGTAAAATTAGTACCTAACTTTTGCAAATTAGCCTTTTTGTCTCTGAAATTATAACATGGCGACCAAAACATTTATCAGTTAAGTTCAATTGTTAGATGGTATGATATGACACATTGAATGAAGACGCGGCGCTTGATGTGGACTGCACGTCACTAAGTTTGAGTTTTTATTCAAATGACTAATGATCCTAGTATCTTTTTCTTTATACTCATTTTTTTTTTCTTCTGACAATTGTATTTTTGTTTATCTTGCAGAAGTTACTATAGATGTACTAGTGTCAACTGCAATGTTCGCAAGCACGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAACAATGACCTCTGAAAAAGATTCAATGACTTCTCTTAAGTAA
Protein sequence

>MS.gene20234.t1

MDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVRFKPATNISPSQANIFGGALSSSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTNQPQPQKSMETNPQHLNHDNFRANTSSKLHQNITLPTETYQATESCTMAPQNMEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKQQHQKRNSGATSGMISDGMVQDKVWSNNSNQNERNEGRIDNQVKASQPNDFALENSCGLSGECEEGSKGFEAEEDDPRSKRRKNENQSNEVAVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTSVNCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTTMTSEKDSMTSLK