Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050650.t1 | XP_013450604.1 | 95.8 | 168 | 7 | 0 | 1 | 168 | 87 | 254 | 6.20E-84 | 320.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050650.t1 | O32107 | 48.3 | 147 | 65 | 1 | 21 | 156 | 3 | 149 | 8.6e-26 | 118.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050650.t1 | A0A072U4K7 | 95.8 | 168 | 7 | 0 | 1 | 168 | 87 | 254 | 4.5e-84 | 320.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene050650 | 0.819581 | 1.08E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene051525 | 0.833136 | 6.34E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene051582 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene051860 | 0.809354 | 1.97E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene052011 | -0.844649 | 6.63E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene052253 | 0.8093 | 2.03E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene053836 | 0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene054010 | 0.809848 | 1.54E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene054011 | 0.807889 | 4.05E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene054183 | 0.818553 | 1.85E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene05553 | 0.816658 | 4.94E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene055604 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene057121 | 0.813542 | 2.43E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene057469 | 0.81316 | 2.95E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene057476 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene058002 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene05811 | 0.82557 | 4.36E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene05886 | 0.808672 | 2.76E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene05907 | 0.828979 | 6.65E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene059420 | 0.815278 | 1.00E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene05984 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene061049 | 0.807416 | 5.11E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene061679 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene061788 | 0.815438 | 9.24E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene062853 | 0.811492 | 6.81E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene063074 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene063085 | 0.806929 | 6.48E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene063114 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene063426 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene064048 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene06470 | 0.809902 | 1.50E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene065042 | 0.806177 | 9.34E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene065475 | 0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene066388 | 0.837676 | 4.52E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene06691 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene067414 | 0.801548 | 8.55E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene06821 | 0.800875 | 1.17E-48 | -1.69E-46 |
| MS.gene050650 | MS.gene06900 | 0.806202 | 9.22E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene071062 | 0.836874 | 7.25E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene071546 | 0.813487 | 2.50E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene072618 | 0.833692 | 4.61E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene073438 | 0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene073723 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene07431 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene07619 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene09574 | 0.816511 | 5.33E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene20234 | 0.805935 | 1.05E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene20340 | 0.806215 | 9.17E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene20556 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene20612 | 0.802152 | 6.43E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene21053 | 0.803951 | 2.73E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene21271 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene21716 | 0.826646 | 2.42E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene21907 | 0.804632 | 1.97E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene22295 | 0.823354 | 1.45E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene22296 | 0.813653 | 2.30E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene22477 | 0.808712 | 2.71E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene22764 | 0.806277 | 8.90E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene23002 | 0.811557 | 6.60E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene23088 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene050650 | MS.gene24247 | 0.807674 | 4.50E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene24730 | 0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene26649 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene27094 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene27938 | 0.812269 | 4.61E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene28067 | 0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene28311 | 0.82508 | 5.70E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene28404 | 0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene28998 | 0.801713 | 7.91E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene29105 | 0.812872 | 3.41E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene31671 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene33198 | 0.831403 | 1.70E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene34272 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene35394 | -0.818574 | 1.83E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene37233 | 0.810734 | 9.95E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene37952 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene38339 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene39104 | 0.826617 | 2.46E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene39299 | 0.808326 | 3.27E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene39334 | 0.8357 | 1.44E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene39336 | 0.824979 | 6.02E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene40678 | 0.806225 | 9.12E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene40751 | 0.80353 | 3.34E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene41713 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene43053 | -0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene43917 | 0.830612 | 2.66E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene43919 | 0.830215 | 3.33E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene43933 | 0.802984 | 4.33E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene43974 | 0.809025 | 2.32E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene44398 | 0.819586 | 1.07E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene45108 | 0.842333 | 2.76E-58 | -1.69E-46 |
| MS.gene050650 | MS.gene45434 | 0.820297 | 7.39E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene46352 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene47758 | 0.813905 | 2.02E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene47869 | 0.804861 | 1.76E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene50644 | 0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene52600 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene53143 | 0.819866 | 9.27E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene53843 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene55321 | 0.823418 | 1.40E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene55340 | 0.813399 | 2.61E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene56177 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene57299 | 0.81576 | 7.84E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene58091 | 0.808005 | 3.83E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene58270 | 0.805029 | 1.63E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene58480 | 0.811214 | 7.83E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene58500 | 0.805825 | 1.11E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene58501 | 0.803756 | 3.00E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene58674 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene59730 | 0.833377 | 5.52E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene60286 | 0.820959 | 5.21E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene60391 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene60558 | 0.801806 | 7.57E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene60813 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene60909 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene61507 | 0.831159 | 1.96E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene62419 | 0.810662 | 1.03E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene62645 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene050650 | MS.gene63507 | 0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene63820 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene64049 | 0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene64621 | 0.825947 | 3.55E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene65665 | 0.846406 | 2.22E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene65851 | 0.819109 | 1.38E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene66157 | 0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene66332 | 0.804577 | 2.02E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene66847 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene67204 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene67226 | 0.818963 | 1.49E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene68168 | 0.810777 | 9.74E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene68315 | 0.835809 | 1.35E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene68723 | 0.808394 | 3.17E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene68764 | 0.809667 | 1.69E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene68907 | 0.809628 | 1.72E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene70368 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene71456 | 0.83618 | 1.09E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene72477 | 0.819308 | 1.24E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene74030 | -0.807859 | 4.11E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene74031 | -0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene74594 | 0.824698 | 7.01E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene75621 | -0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene76463 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene76554 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene77302 | 0.81751 | 3.18E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene79179 | 0.817445 | 3.28E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene79290 | 0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene79677 | 0.804779 | 1.83E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene81435 | 0.82006 | 8.37E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene81436 | 0.840859 | 6.75E-58 | -1.69E-46 |
| MS.gene050650 | MS.gene82533 | 0.831671 | 1.46E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene82769 | 0.83101 | 2.13E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene85276 | -0.846737 | 1.80E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene85860 | 0.812654 | 3.80E-51 | -1.69E-46 |
| MS.gene050650 | MS.gene86055 | 0.821769 | 3.38E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene86382 | 0.808316 | 3.29E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene86932 | 0.801345 | 9.41E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene88667 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene89017 | 0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene90838 | 0.838165 | 3.38E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene90870 | 0.801382 | 9.24E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene91159 | 0.820673 | 6.06E-53 | -1.69E-46 |
| MS.gene050650 | MS.gene91509 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene91645 | 0.801607 | 8.31E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene93385 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene93892 | 0.80731 | 5.38E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene94661 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene95864 | 0.806487 | 8.03E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene96276 | 0.831858 | 1.32E-55 | -1.69E-46 |
| MS.gene050650 | MS.gene96945 | 0.804116 | 2.52E-49 | -1.69E-46 |
| MS.gene050650 | MS.gene97706 | 0.828182 | 1.04E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene98786 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene050650 | MS.gene99854 | 0.81891 | 1.53E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050650.t1 | MTR_7g117385 | 95.833 | 168 | 7 | 0 | 1 | 168 | 87 | 254 | 1.12e-115 | 328 |
| MS.gene050650.t1 | MTR_3g085670 | 50.000 | 136 | 67 | 1 | 24 | 158 | 17 | 152 | 7.88e-42 | 137 |
| MS.gene050650.t1 | MTR_2g087870 | 43.137 | 153 | 84 | 2 | 6 | 157 | 10 | 160 | 7.10e-39 | 130 |
| MS.gene050650.t1 | MTR_2g087870 | 41.071 | 112 | 64 | 1 | 6 | 117 | 10 | 119 | 3.31e-25 | 94.7 |
| MS.gene050650.t1 | MTR_2g062820 | 32.203 | 118 | 79 | 1 | 18 | 134 | 55 | 172 | 4.11e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050650.t1 | AT3G61770 | 78.916 | 166 | 35 | 0 | 1 | 166 | 117 | 282 | 1.55e-95 | 278 |
| MS.gene050650.t1 | AT1G67600 | 50.365 | 137 | 67 | 1 | 23 | 158 | 17 | 153 | 2.96e-42 | 139 |
| MS.gene050650.t1 | AT1G24350 | 49.242 | 132 | 66 | 1 | 23 | 153 | 21 | 152 | 2.75e-40 | 134 |
| MS.gene050650.t1 | AT1G24350 | 48.800 | 125 | 63 | 1 | 23 | 146 | 21 | 145 | 3.91e-37 | 125 |
| MS.gene050650.t1 | AT1G24350 | 48.000 | 125 | 64 | 1 | 23 | 146 | 21 | 145 | 4.35e-37 | 126 |
| MS.gene050650.t1 | AT1G24350 | 48.000 | 125 | 64 | 1 | 23 | 146 | 21 | 145 | 7.42e-37 | 124 |
| MS.gene050650.t1 | AT1G24350 | 48.387 | 124 | 63 | 1 | 23 | 145 | 21 | 144 | 8.33e-37 | 124 |
| MS.gene050650.t1 | AT3G21610 | 47.761 | 134 | 68 | 2 | 25 | 157 | 35 | 167 | 1.66e-35 | 122 |
| MS.gene050650.t1 | AT3G21610 | 48.214 | 112 | 57 | 1 | 47 | 157 | 4 | 115 | 8.01e-31 | 108 |
| MS.gene050650.t1 | AT3G12685 | 38.095 | 126 | 59 | 2 | 50 | 156 | 80 | 205 | 3.95e-20 | 83.6 |
Find 35 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGATTGTTCTGTGCTTC+TGG | 0.174739 | 7.3:-919690 | MS.gene050650:CDS |
| TTTAGCTTTCTTTCACTAAT+TGG | 0.198388 | 7.3:+916244 | None:intergenic |
| ATTGTTATGTATGATGCTAT+TGG | 0.409979 | 7.3:-919558 | MS.gene050650:CDS |
| GTGTTTGCTGGTGCCCTGCT+TGG | 0.410993 | 7.3:-916193 | MS.gene050650:CDS |
| ACCCCATCTCAAGTGTTTGC+TGG | 0.426034 | 7.3:-916205 | MS.gene050650:CDS |
| AGGTTGTGTTGTGGTGGGTT+AGG | 0.437936 | 7.3:-916143 | None:intergenic |
| ATTTCTTTGTTGAAAGAAAG+TGG | 0.443933 | 7.3:-919716 | MS.gene050650:CDS |
| AGAAAGCTAAAGGAACTTCT+TGG | 0.460632 | 7.3:-916232 | MS.gene050650:CDS |
| ACAGGTGCTTAACATGATTC+TGG | 0.467232 | 7.3:-916287 | MS.gene050650:intron |
| ATTCTGGCTGACATGTTTCA+AGG | 0.469695 | 7.3:-916271 | MS.gene050650:CDS |
| AGACTAAACCCCAAAGAAAC+CGG | 0.472907 | 7.3:+919582 | None:intergenic |
| ACAACCTTGGCAGCAGAAAC+AGG | 0.473702 | 7.3:+916159 | None:intergenic |
| GTAGCCTGTTTCTGCTGCCA+AGG | 0.476759 | 7.3:-916163 | MS.gene050650:CDS |
| TTTCTTTGTTGAAAGAAAGT+GGG | 0.486881 | 7.3:-919715 | MS.gene050650:CDS |
| AACAACCCAGAAACAAAAGT+TGG | 0.487269 | 7.3:+919777 | None:intergenic |
| GAAGCCAATGTAGCCACAAA+AGG | 0.498839 | 7.3:+919804 | None:intergenic |
| CTGCCAAGGTTGTGTTGTGG+TGG | 0.507895 | 7.3:-916149 | MS.gene050650:CDS |
| ACATGCTGGCATGCAAGCTC+AGG | 0.509605 | 7.3:-919526 | MS.gene050650:intron |
| ACTTCAGTTGCTCTCTGTCA+TGG | 0.510430 | 7.3:-919624 | MS.gene050650:CDS |
| CATAGCGCAGAATGAGAAGA+AGG | 0.513464 | 7.3:+919660 | None:intergenic |
| GCACCAGCAAACACTTGAGA+TGG | 0.518672 | 7.3:+916202 | None:intergenic |
| AATTAGTGAAAGAAAGCTAA+AGG | 0.524355 | 7.3:-916242 | MS.gene050650:CDS |
| ACAACCCAGAAACAAAAGTT+GGG | 0.531405 | 7.3:+919778 | None:intergenic |
| TGGGTTGTTTGCGTGGTTTG+TGG | 0.534535 | 7.3:-919763 | MS.gene050650:CDS |
| GATTGTTCTGTGCTTCTGGA+GGG | 0.541900 | 7.3:-919686 | MS.gene050650:CDS |
| AGATTGTTCTGTGCTTCTGG+AGG | 0.542518 | 7.3:-919687 | MS.gene050650:CDS |
| TGCCAAGGTTGTGTTGTGGT+GGG | 0.550908 | 7.3:-916148 | MS.gene050650:CDS |
| CACCAGCAAACACTTGAGAT+GGG | 0.556379 | 7.3:+916203 | None:intergenic |
| TTGTTTCTGGGTTGTTTGCG+TGG | 0.569800 | 7.3:-919770 | MS.gene050650:CDS |
| CTGCTGCCAAGGTTGTGTTG+TGG | 0.588915 | 7.3:-916152 | MS.gene050650:CDS |
| AACCCACCACAACACAACCT+TGG | 0.598748 | 7.3:+916146 | None:intergenic |
| TTCTGGCTGACATGTTTCAA+GGG | 0.603699 | 7.3:-916270 | MS.gene050650:CDS |
| ATGCGTAACGACGAATGCAA+AGG | 0.606693 | 7.3:-919838 | MS.gene050650:CDS |
| ATTGGTGTTAGAAGACATGC+TGG | 0.633014 | 7.3:-919540 | MS.gene050650:CDS |
| ACCAGCAAACACTTGAGATG+GGG | 0.665470 | 7.3:+916204 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTAATAAATAATTCAA+GGG | + | chr7.3:917996-918015 | None:intergenic | 10.0% |
| !! | TACTAATAATAAAATATGAA+AGG | + | chr7.3:916511-916530 | None:intergenic | 10.0% |
| !! | TATTTGTAATAAATAATTCA+AGG | + | chr7.3:917997-918016 | None:intergenic | 10.0% |
| !!! | AATTTTTCTTTATAAACAAA+AGG | + | chr7.3:919656-919675 | None:intergenic | 10.0% |
| !! | ACTGAAGATTTATATATATA+AGG | - | chr7.3:917524-917543 | MS.gene050650:intron | 15.0% |
| !! | ATAATTTACAGAAATGATAT+AGG | - | chr7.3:918693-918712 | MS.gene050650:intron | 15.0% |
| !! | TAATTTACAGAAATGATATA+GGG | - | chr7.3:918694-918713 | MS.gene050650:intron | 15.0% |
| !! | TTAAAAAAAATGTATATGCT+TGG | - | chr7.3:918649-918668 | MS.gene050650:intron | 15.0% |
| !! | TTTGTAATAAATAATTCAAG+GGG | + | chr7.3:917995-918014 | None:intergenic | 15.0% |
| !!! | TATGAATTTTTTTGTTTTAG+AGG | - | chr7.3:918443-918462 | MS.gene050650:intron | 15.0% |
| !! | AAGTTAAACAAAAATGAACT+GGG | - | chr7.3:917818-917837 | MS.gene050650:intron | 20.0% |
| !! | AATGTTCAAAATACTGAATA+TGG | + | chr7.3:917959-917978 | None:intergenic | 20.0% |
| !! | ATTTATTACAAATAAACCAG+TGG | - | chr7.3:918003-918022 | MS.gene050650:intron | 20.0% |
| !! | TTGTAATAAATAATTCAAGG+GGG | + | chr7.3:917994-918013 | None:intergenic | 20.0% |
| !! | TTGTACTATTTAAAAACCAA+AGG | + | chr7.3:917849-917868 | None:intergenic | 20.0% |
| !! | TTTATGATAGAACATTATGA+CGG | - | chr7.3:918981-919000 | MS.gene050650:intron | 20.0% |
| !! | TTTCTAACAGTCTAAATATT+GGG | + | chr7.3:918479-918498 | None:intergenic | 20.0% |
| !! | TTTGTTGCAACTTAAATAAT+TGG | + | chr7.3:917467-917486 | None:intergenic | 20.0% |
| !!! | CATTTTAAGTTTTGTTATTG+TGG | - | chr7.3:917236-917255 | MS.gene050650:intron | 20.0% |
| !!! | CATTTTTTTTAAATGACATC+CGG | + | chr7.3:918641-918660 | None:intergenic | 20.0% |
| !!! | GGTATTATTTTTCCTTAAAT+TGG | - | chr7.3:918609-918628 | MS.gene050650:intron | 20.0% |
| !!! | TATTCAGTATTTTGAACATT+AGG | - | chr7.3:917959-917978 | MS.gene050650:intron | 20.0% |
| !!! | TTTTCTATATGCTTTAAACT+CGG | - | chr7.3:916695-916714 | MS.gene050650:intron | 20.0% |
| ! | AAAAAAATGTATATGCTTGG+TGG | - | chr7.3:918652-918671 | MS.gene050650:intron | 25.0% |
| ! | AAATAAACCAGTGGAAAAAA+GGG | - | chr7.3:918012-918031 | MS.gene050650:intron | 25.0% |
| ! | AACTATGTTTCTTCATTGAT+AGG | - | chr7.3:918511-918530 | MS.gene050650:intron | 25.0% |
| ! | AATAGCAGGTTAAAAATCAA+TGG | + | chr7.3:917139-917158 | None:intergenic | 25.0% |
| ! | AATGAAGAAACATAGTTCAA+GGG | + | chr7.3:918508-918527 | None:intergenic | 25.0% |
| ! | AATTAGTGAAAGAAAGCTAA+AGG | - | chr7.3:919751-919770 | MS.gene050650:CDS | 25.0% |
| ! | AGAAATACATAAAATGCAGA+TGG | + | chr7.3:918833-918852 | None:intergenic | 25.0% |
| ! | ATTATAGAATAAAGGACGAA+GGG | + | chr7.3:917086-917105 | None:intergenic | 25.0% |
| ! | ATTGTTATGTATGATGCTAT+TGG | - | chr7.3:916435-916454 | MS.gene050650:intron | 25.0% |
| ! | ATTTCTTTGTTGAAAGAAAG+TGG | - | chr7.3:916277-916296 | MS.gene050650:CDS | 25.0% |
| ! | CAAACAATCTCATCATAATT+GGG | + | chr7.3:918071-918090 | None:intergenic | 25.0% |
| ! | CAACATCCACAAAAAATAAA+GGG | + | chr7.3:918338-918357 | None:intergenic | 25.0% |
| ! | CTTACTAATGTCCAAAAATA+TGG | + | chr7.3:917709-917728 | None:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr7.3:919258-919277 | None:intergenic | 25.0% |
| ! | GAAGTTAAACAAAAATGAAC+TGG | - | chr7.3:917817-917836 | MS.gene050650:intron | 25.0% |
| ! | GTAAAATTTAGTCACAAACA+GGG | + | chr7.3:918170-918189 | None:intergenic | 25.0% |
| ! | GTAACATAATCTCTTTAGTT+TGG | - | chr7.3:917416-917435 | MS.gene050650:intron | 25.0% |
| ! | GTTTCTAACAGTCTAAATAT+TGG | + | chr7.3:918480-918499 | None:intergenic | 25.0% |
| ! | TAAAAAACATTAGAGTAAGC+TGG | + | chr7.3:918930-918949 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | + | chr7.3:919254-919273 | None:intergenic | 25.0% |
| ! | TATTATAGAATAAAGGACGA+AGG | + | chr7.3:917087-917106 | None:intergenic | 25.0% |
| ! | TCAACATCCACAAAAAATAA+AGG | + | chr7.3:918339-918358 | None:intergenic | 25.0% |
| ! | TTAGTAAGATATTTCCCATA+AGG | - | chr7.3:917721-917740 | MS.gene050650:intron | 25.0% |
| ! | TTATATCTCAATTTGAGAAC+TGG | - | chr7.3:917664-917683 | MS.gene050650:intron | 25.0% |
| ! | TTCAAAATACTGAATATGGT+TGG | + | chr7.3:917955-917974 | None:intergenic | 25.0% |
| ! | TTGAATTAGGTTTGAATCTT+TGG | - | chr7.3:917615-917634 | MS.gene050650:intron | 25.0% |
| ! | TTGCAAGAATTTGCAATAAT+AGG | + | chr7.3:916976-916995 | None:intergenic | 25.0% |
| ! | TTTCAAACTAACAAAAGACT+GGG | + | chr7.3:918795-918814 | None:intergenic | 25.0% |
| ! | TTTCTTTGTTGAAAGAAAGT+GGG | - | chr7.3:916278-916297 | MS.gene050650:CDS | 25.0% |
| !! | GTTATTGTTGTATTTCTGTA+GGG | - | chr7.3:919444-919463 | MS.gene050650:intron | 25.0% |
| !! | GTTGTTGTTGTATTTATGTA+GGG | - | chr7.3:919551-919570 | MS.gene050650:CDS | 25.0% |
| !! | TGTTGTTGTTGTATTTATGT+AGG | - | chr7.3:919550-919569 | MS.gene050650:CDS | 25.0% |
| !! | TTTCTATATGCTTTAAACTC+GGG | - | chr7.3:916696-916715 | MS.gene050650:intron | 25.0% |
| !!! | ATATGGTTGGTAAATTTCTT+AGG | + | chr7.3:917942-917961 | None:intergenic | 25.0% |
| !!! | ATGAGGTTTTAGATATAACA+TGG | + | chr7.3:918296-918315 | None:intergenic | 25.0% |
| !!! | TTTAGCTTTCTTTCACTAAT+TGG | + | chr7.3:919752-919771 | None:intergenic | 25.0% |
| ATGAAGAAACATAGTTCAAG+GGG | + | chr7.3:918507-918526 | None:intergenic | 30.0% | |
| ATTTCTGTAGTGTTAGGATA+TGG | - | chr7.3:918958-918977 | MS.gene050650:intron | 30.0% | |
| CAAATAAACCAGTGGAAAAA+AGG | - | chr7.3:918011-918030 | MS.gene050650:intron | 30.0% | |
| CAATGAAGAAACATAGTTCA+AGG | + | chr7.3:918509-918528 | None:intergenic | 30.0% | |
| CGTAAAATTTAGTCACAAAC+AGG | + | chr7.3:918171-918190 | None:intergenic | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | + | chr7.3:919255-919274 | None:intergenic | 30.0% | |
| CTAATGTCCAAAAATATGGT+TGG | + | chr7.3:917705-917724 | None:intergenic | 30.0% | |
| CTTTCCATAACTTAGCTATA+TGG | + | chr7.3:918122-918141 | None:intergenic | 30.0% | |
| GCAAACAATCTCATCATAAT+TGG | + | chr7.3:918072-918091 | None:intergenic | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | + | chr7.3:919261-919280 | None:intergenic | 30.0% | |
| GTTGTATTTATGTAGGGTTA+GGG | - | chr7.3:919557-919576 | MS.gene050650:CDS | 30.0% | |
| GTTTCAAACTAACAAAAGAC+TGG | + | chr7.3:918796-918815 | None:intergenic | 30.0% | |
| TACGCGTTCATATAATCATT+GGG | - | chr7.3:918187-918206 | MS.gene050650:intron | 30.0% | |
| TATACTCAGCATTCATTTAG+TGG | - | chr7.3:917572-917591 | MS.gene050650:intron | 30.0% | |
| TGAACCATATAGCTAAGTTA+TGG | - | chr7.3:918115-918134 | MS.gene050650:intron | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr7.3:919340-919359 | None:intergenic | 30.0% | |
| TGGCAAATAATGAATTAGCT+AGG | - | chr7.3:917592-917611 | MS.gene050650:intron | 30.0% | |
| TGTTGTATTTATGTAGGGTT+AGG | - | chr7.3:919556-919575 | MS.gene050650:CDS | 30.0% | |
| TTACGCGTTCATATAATCAT+TGG | - | chr7.3:918186-918205 | MS.gene050650:intron | 30.0% | |
| TTAGATATAACATGGAGATG+AGG | + | chr7.3:918288-918307 | None:intergenic | 30.0% | |
| TTCCTTAAATTGGAAAGAAC+CGG | - | chr7.3:918619-918638 | MS.gene050650:intron | 30.0% | |
| TTGTACAGAAATGATCACTT+GGG | - | chr7.3:918894-918913 | MS.gene050650:intron | 30.0% | |
| TTGTATTTATGTAGGGTTAG+GGG | - | chr7.3:919558-919577 | MS.gene050650:CDS | 30.0% | |
| ! | AATTTTCACATGACTAGAGT+AGG | - | chr7.3:917547-917566 | MS.gene050650:intron | 30.0% |
| ! | CAGTATACAGTTTTGCAATT+TGG | - | chr7.3:918042-918061 | MS.gene050650:intron | 30.0% |
| ! | GAATTCACCAACCATATTTT+TGG | - | chr7.3:917695-917714 | MS.gene050650:intron | 30.0% |
| ! | GGTTATTGTTGTATTTCTGT+AGG | - | chr7.3:919443-919462 | MS.gene050650:intron | 30.0% |
| ! | GTTAGTATTTCTGTAGTGTT+AGG | - | chr7.3:918952-918971 | MS.gene050650:intron | 30.0% |
| ! | TGAATTAGCTAGGTTGAATT+AGG | - | chr7.3:917602-917621 | MS.gene050650:intron | 30.0% |
| !! | TGAATCTAGCTCTAATGAAA+AGG | - | chr7.3:917053-917072 | MS.gene050650:intron | 30.0% |
| !! | TGTGCACTACTTTTGAATTA+TGG | - | chr7.3:917203-917222 | MS.gene050650:intron | 30.0% |
| !! | TTTGTTGATTTGCGAATACT+TGG | - | chr7.3:918400-918419 | MS.gene050650:intron | 30.0% |
| !!! | AGATCTATTGTCATTTTGTC+TGG | - | chr7.3:919609-919628 | MS.gene050650:CDS | 30.0% |
| AAAAAATAAAGGGACCTCCA+AGG | + | chr7.3:918328-918347 | None:intergenic | 35.0% | |
| AACAACCCAGAAACAAAAGT+TGG | + | chr7.3:916219-916238 | None:intergenic | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | + | chr7.3:919337-919356 | None:intergenic | 35.0% | |
| AATACTAAACCCTCCTCATT+TGG | + | chr7.3:919283-919302 | None:intergenic | 35.0% | |
| ACAACCCAGAAACAAAAGTT+GGG | + | chr7.3:916218-916237 | None:intergenic | 35.0% | |
| ACCATTCAACTGTTGCATAT+TGG | + | chr7.3:916796-916815 | None:intergenic | 35.0% | |
| AGAAAGCTAAAGGAACTTCT+TGG | - | chr7.3:919761-919780 | MS.gene050650:CDS | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | + | chr7.3:919336-919355 | None:intergenic | 35.0% | |
| AGCATAAGAAAGAGAATAGC+AGG | + | chr7.3:917153-917172 | None:intergenic | 35.0% | |
| AGTACAACATGGTTCACATT+TGG | + | chr7.3:916899-916918 | None:intergenic | 35.0% | |
| AGTTATATCACTTAGAAGCC+AGG | + | chr7.3:917498-917517 | None:intergenic | 35.0% | |
| ATACTAAACCCTCCTCATTT+GGG | + | chr7.3:919282-919301 | None:intergenic | 35.0% | |
| ATAGCTAAGTTATGGAAAGC+TGG | - | chr7.3:918123-918142 | MS.gene050650:intron | 35.0% | |
| ATCCGGTTCTTTCCAATTTA+AGG | + | chr7.3:918624-918643 | None:intergenic | 35.0% | |
| ATTGGGAGTCAAAATGATGA+TGG | - | chr7.3:918204-918223 | MS.gene050650:intron | 35.0% | |
| ATTTCAAGCATCTCTTGCTA+AGG | - | chr7.3:918871-918890 | MS.gene050650:intron | 35.0% | |
| CACATAGAATTGTGAGTTTG+AGG | - | chr7.3:916737-916756 | MS.gene050650:intron | 35.0% | |
| CCATTCAACTGTTGCATATT+GGG | + | chr7.3:916795-916814 | None:intergenic | 35.0% | |
| CTAGTCCACATATAGACATT+AGG | + | chr7.3:918738-918757 | None:intergenic | 35.0% | |
| CTCTTTCTTATGCTTAGTTG+TGG | - | chr7.3:917159-917178 | MS.gene050650:intron | 35.0% | |
| GGATCTCTAATGCAAATGAT+GGG | - | chr7.3:919579-919598 | MS.gene050650:CDS | 35.0% | |
| GTATAATGACAGTAAGATCG+AGG | - | chr7.3:918588-918607 | MS.gene050650:intron | 35.0% | |
| GTGCTCCTAAATTATCAGTT+AGG | - | chr7.3:918757-918776 | MS.gene050650:intron | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | - | chr7.3:919081-919100 | MS.gene050650:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr7.3:919341-919360 | None:intergenic | 35.0% | |
| GTTAGATTCATTCACCTTGT+TGG | + | chr7.3:917012-917031 | None:intergenic | 35.0% | |
| GTTGTACAGAAATGATCACT+TGG | - | chr7.3:918893-918912 | MS.gene050650:intron | 35.0% | |
| TAGTGCACAAAACATTAACC+TGG | - | chr7.3:916836-916855 | MS.gene050650:intron | 35.0% | |
| TCACATACTCAGCATTCATT+TGG | - | chr7.3:917792-917811 | MS.gene050650:intron | 35.0% | |
| TCACGCCTAACTGATAATTT+AGG | + | chr7.3:918765-918784 | None:intergenic | 35.0% | |
| TGAAGAAACATAGTTCAAGG+GGG | + | chr7.3:918506-918525 | None:intergenic | 35.0% | |
| TGACCAGAAAATTGTGTGTA+TGG | - | chr7.3:919677-919696 | MS.gene050650:CDS | 35.0% | |
| ! | AATTTGAGAACTGGTTCCTA+GGG | - | chr7.3:917673-917692 | MS.gene050650:intron | 35.0% |
| ! | CTGAAGGAAGCTAAACATTT+TGG | - | chr7.3:918249-918268 | MS.gene050650:intron | 35.0% |
| ! | TCATTTTCCCTTTTTTCCAC+TGG | + | chr7.3:918022-918041 | None:intergenic | 35.0% |
| ! | TCTCTTTTTCCGGTTTCTTT+GGG | - | chr7.3:916402-916421 | MS.gene050650:intron | 35.0% |
| ! | TGATGAAAGCTTCTGACTTT+TGG | + | chr7.3:917875-917894 | None:intergenic | 35.0% |
| ! | TTCTCTTTTTCCGGTTTCTT+TGG | - | chr7.3:916401-916420 | MS.gene050650:intron | 35.0% |
| !! | CAAACCCAACTTTTGTTTCT+GGG | - | chr7.3:916211-916230 | MS.gene050650:CDS | 35.0% |
| !! | TCAAACCCAACTTTTGTTTC+TGG | - | chr7.3:916210-916229 | MS.gene050650:CDS | 35.0% |
| !!! | TGTTGCTGATTCTCTTTTTC+CGG | - | chr7.3:916392-916411 | MS.gene050650:intron | 35.0% |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | - | chr7.3:919267-919286 | MS.gene050650:intron | 35.0% |
| AAATTCATAGCCACCAAGAC+AGG | + | chr7.3:918432-918451 | None:intergenic | 40.0% | |
| AACAAAGCCTTAGTGGGATA+AGG | - | chr7.3:919414-919433 | MS.gene050650:intron | 40.0% | |
| AACCTCATAAACATCCACCT+TGG | - | chr7.3:918308-918327 | MS.gene050650:intron | 40.0% | |
| ACAGGTGCTTAACATGATTC+TGG | - | chr7.3:919706-919725 | MS.gene050650:CDS | 40.0% | |
| AGACTAAACCCCAAAGAAAC+CGG | + | chr7.3:916414-916433 | None:intergenic | 40.0% | |
| AGGCTACTAAAAATCCAAGC+AGG | + | chr7.3:919817-919836 | None:intergenic | 40.0% | |
| CAGAAAATTGTGTGTATGGC+TGG | - | chr7.3:919681-919700 | MS.gene050650:CDS | 40.0% | |
| CATACTCAGCATTCATTTGG+TGG | - | chr7.3:917795-917814 | MS.gene050650:intron | 40.0% | |
| CATTAGAGCTAGATTCAGCT+AGG | + | chr7.3:917050-917069 | None:intergenic | 40.0% | |
| CATTTGCTTGAGCTTCTGTT+TGG | - | chr7.3:916556-916575 | MS.gene050650:intron | 40.0% | |
| CCCAATATGCAACAGTTGAA+TGG | - | chr7.3:916792-916811 | MS.gene050650:intron | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | + | chr7.3:919335-919354 | None:intergenic | 40.0% | |
| GATATTTCCCATAAGGCTGA+AGG | - | chr7.3:917728-917747 | MS.gene050650:intron | 40.0% | |
| GCAGATGGAGAAAGATATGT+TGG | + | chr7.3:918818-918837 | None:intergenic | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | + | chr7.3:919360-919379 | None:intergenic | 40.0% | |
| GGCTACTAAAAATCCAAGCA+GGG | + | chr7.3:919816-919835 | None:intergenic | 40.0% | |
| GGGATCTCTAATGCAAATGA+TGG | - | chr7.3:919578-919597 | MS.gene050650:CDS | 40.0% | |
| GGTCAAACTGACAAATGACA+AGG | + | chr7.3:917118-917137 | None:intergenic | 40.0% | |
| GGTTTAGACTCAGTACAACA+TGG | + | chr7.3:916910-916929 | None:intergenic | 40.0% | |
| TACTAAACCCTCCTCATTTG+GGG | + | chr7.3:919281-919300 | None:intergenic | 40.0% | |
| TCGCAAACAAAGCCTAAGTT+GGG | + | chr7.3:919027-919046 | None:intergenic | 40.0% | |
| TCGTGCCTAATGTCTATATG+TGG | - | chr7.3:918730-918749 | MS.gene050650:intron | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | + | chr7.3:919348-919367 | None:intergenic | 40.0% | |
| TTGAGATTGTTCTGTGCTTC+TGG | - | chr7.3:916303-916322 | MS.gene050650:intron | 40.0% | |
| TTGAGGGGTGGAAAATATGA+GGG | - | chr7.3:919074-919093 | MS.gene050650:intron | 40.0% | |
| TTTGAGGGGTGGAAAATATG+AGG | - | chr7.3:919073-919092 | MS.gene050650:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | + | chr7.3:919524-919543 | None:intergenic | 40.0% |
| ! | AATGAACTGGGTTGAACCTT+TGG | - | chr7.3:917830-917849 | MS.gene050650:intron | 40.0% |
| ! | ATTCTGGCTGACATGTTTCA+AGG | - | chr7.3:919722-919741 | MS.gene050650:CDS | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr7.3:919248-919267 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | + | chr7.3:919525-919544 | None:intergenic | 40.0% |
| ! | CAATTTGAGAACTGGTTCCT+AGG | - | chr7.3:917672-917691 | MS.gene050650:intron | 40.0% |
| ! | CAGCCATACACACAATTTTC+TGG | + | chr7.3:919683-919702 | None:intergenic | 40.0% |
| ! | CGTTGGAAGCATATGGATAT+GGG | - | chr7.3:917755-917774 | MS.gene050650:intron | 40.0% |
| ! | CTCTTTTTCCGGTTTCTTTG+GGG | - | chr7.3:916403-916422 | MS.gene050650:intron | 40.0% |
| ! | GTTGTGATTAGTTATGCGCA+AGG | + | chr7.3:917445-917464 | None:intergenic | 40.0% |
| ! | TAGTCCTTTTGTGGCTACAT+TGG | - | chr7.3:916185-916204 | MS.gene050650:CDS | 40.0% |
| ! | TCGTTGGAAGCATATGGATA+TGG | - | chr7.3:917754-917773 | MS.gene050650:intron | 40.0% |
| ! | TTCTGGCTGACATGTTTCAA+GGG | - | chr7.3:919723-919742 | MS.gene050650:CDS | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr7.3:919247-919266 | None:intergenic | 40.0% |
| !! | ATATGGTTGGTGAATTCCCT+AGG | + | chr7.3:917692-917711 | None:intergenic | 40.0% |
| !! | ATTCACCTTGTTGGCTTGTT+GGG | + | chr7.3:917003-917022 | None:intergenic | 40.0% |
| !! | ATTGGTGTTAGAAGACATGC+TGG | - | chr7.3:916453-916472 | MS.gene050650:intron | 40.0% |
| !! | GGTCAAGATTAGTCCTTTTG+TGG | - | chr7.3:916176-916195 | MS.gene050650:CDS | 40.0% |
| !! | GTCATTTTGTCTGGATTCTG+TGG | - | chr7.3:919618-919637 | MS.gene050650:CDS | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr7.3:919406-919425 | None:intergenic | 40.0% |
| !! | TACTTGGTTTTCTCCTGTCT+TGG | - | chr7.3:918416-918435 | MS.gene050650:intron | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | - | chr7.3:919030-919049 | MS.gene050650:intron | 40.0% |
| !!! | GCTTTTGAAGCAGACTACTT+TGG | - | chr7.3:918557-918576 | MS.gene050650:intron | 40.0% |
| !!! | GGAGGTCCCTTTATTTTTTG+TGG | - | chr7.3:918329-918348 | MS.gene050650:intron | 40.0% |
| AAACAAGTGCTACAACTGCC+AGG | + | chr7.3:916857-916876 | None:intergenic | 45.0% | |
| AAATAAAGGGACCTCCAAGG+TGG | + | chr7.3:918325-918344 | None:intergenic | 45.0% | |
| AACGAACACCTTCAGCCTTA+TGG | + | chr7.3:917739-917758 | None:intergenic | 45.0% | |
| ACCAGCAAACACTTGAGATG+GGG | + | chr7.3:919792-919811 | None:intergenic | 45.0% | |
| ACTAAACCCTCCTCATTTGG+GGG | + | chr7.3:919280-919299 | None:intergenic | 45.0% | |
| ACTCGCAAACAAAGCCTTAG+TGG | - | chr7.3:919407-919426 | MS.gene050650:intron | 45.0% | |
| ACTTCAGTTGCTCTCTGTCA+TGG | - | chr7.3:916369-916388 | MS.gene050650:intron | 45.0% | |
| AGATTGTTCTGTGCTTCTGG+AGG | - | chr7.3:916306-916325 | MS.gene050650:intron | 45.0% | |
| ATGAACCCAACAAGCCAACA+AGG | - | chr7.3:916995-917014 | MS.gene050650:intron | 45.0% | |
| ATGCGTAACGACGAATGCAA+AGG | - | chr7.3:916155-916174 | MS.gene050650:CDS | 45.0% | |
| CACCAGCAAACACTTGAGAT+GGG | + | chr7.3:919793-919812 | None:intergenic | 45.0% | |
| CATAGCGCAGAATGAGAAGA+AGG | + | chr7.3:916336-916355 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGACT+TGG | - | chr7.3:919523-919542 | MS.gene050650:intron | 45.0% | |
| CGCAAACAAAGCCTAAGTTG+GGG | + | chr7.3:919026-919045 | None:intergenic | 45.0% | |
| CTCATAAACATCCACCTTGG+AGG | - | chr7.3:918311-918330 | MS.gene050650:intron | 45.0% | |
| CTCCAAGGTGGATGTTTATG+AGG | + | chr7.3:918313-918332 | None:intergenic | 45.0% | |
| CTCGCAAACAAAGCCTAAGT+TGG | + | chr7.3:919028-919047 | None:intergenic | 45.0% | |
| CTCGCAAACAAAGCCTTAGT+GGG | - | chr7.3:919408-919427 | MS.gene050650:intron | 45.0% | |
| GAAGCCAATGTAGCCACAAA+AGG | + | chr7.3:916192-916211 | None:intergenic | 45.0% | |
| GAATAAAGGACGAAGGGACT+AGG | + | chr7.3:917080-917099 | None:intergenic | 45.0% | |
| GATTGTTCTGTGCTTCTGGA+GGG | - | chr7.3:916307-916326 | MS.gene050650:intron | 45.0% | |
| GTGAACTCTTACGAGTCTAC+TGG | - | chr7.3:917360-917379 | MS.gene050650:intron | 45.0% | |
| TCCCGGCATAAATGAAGTCA+CGG | - | chr7.3:916931-916950 | MS.gene050650:intron | 45.0% | |
| TGACTTCATTTATGCCGGGA+GGG | + | chr7.3:916931-916950 | None:intergenic | 45.0% | |
| TGCCGTGACTTCATTTATGC+CGG | + | chr7.3:916936-916955 | None:intergenic | 45.0% | |
| TTAGTTCCCCCAAATGAGGA+GGG | - | chr7.3:919271-919290 | MS.gene050650:intron | 45.0% | |
| TTGCAACAAAGCTGTTCACC+TGG | - | chr7.3:917477-917496 | MS.gene050650:intron | 45.0% | |
| ! | AAACAAAGCCTAAGTTGGGG+CGG | + | chr7.3:919023-919042 | None:intergenic | 45.0% |
| ! | ACGAACACCTTCAGCCTTAT+GGG | + | chr7.3:917738-917757 | None:intergenic | 45.0% |
| ! | AGGTGTTCGTTGGAAGCATA+TGG | - | chr7.3:917748-917767 | MS.gene050650:intron | 45.0% |
| ! | CCAAGTCTTATCCCACTAAG+TGG | + | chr7.3:919526-919545 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr7.3:919035-919054 | MS.gene050650:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr7.3:919054-919035 | None:intergenic | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr7.3:919246-919265 | None:intergenic | 45.0% |
| ! | TTTAGTTCCCCCAAATGAGG+AGG | - | chr7.3:919270-919289 | MS.gene050650:intron | 45.0% |
| !! | ATAAGGCTGAAGGTGTTCGT+TGG | - | chr7.3:917738-917757 | MS.gene050650:intron | 45.0% |
| !! | CATTCACCTTGTTGGCTTGT+TGG | + | chr7.3:917004-917023 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr7.3:919034-919053 | MS.gene050650:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr7.3:919053-919034 | None:intergenic | 45.0% |
| !! | TTGGTTTTCTCCTGTCTTGG+TGG | - | chr7.3:918419-918438 | MS.gene050650:intron | 45.0% |
| !! | TTGTTTCTGGGTTGTTTGCG+TGG | - | chr7.3:916223-916242 | MS.gene050650:CDS | 45.0% |
| !! | TTAAAATTATTATAGAATAA+AGG | + | chr7.3:917094-917113 | None:intergenic | 5.0% |
| AACCCACCACAACACAACCT+TGG | + | chr7.3:919850-919869 | None:intergenic | 50.0% | |
| ACAACCTTGGCAGCAGAAAC+AGG | + | chr7.3:919837-919856 | None:intergenic | 50.0% | |
| ACCCCATCTCAAGTGTTTGC+TGG | - | chr7.3:919788-919807 | MS.gene050650:CDS | 50.0% | |
| AGCCTTAGTGGGATAAGGCT+CGG | - | chr7.3:919419-919438 | MS.gene050650:intron | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | + | chr7.3:919373-919392 | None:intergenic | 50.0% | |
| AGGGGAAGGGAAAGGTTTGA+GGG | - | chr7.3:919058-919077 | MS.gene050650:intron | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | + | chr7.3:919332-919351 | None:intergenic | 50.0% | |
| CTCAGTGTGACTGTGACTGA+AGG | - | chr7.3:918233-918252 | MS.gene050650:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7.3:919520-919539 | None:intergenic | 50.0% | |
| CTTCAGTCACAGTCACACTG+AGG | + | chr7.3:918235-918254 | None:intergenic | 50.0% | |
| GCACCAGCAAACACTTGAGA+TGG | + | chr7.3:919794-919813 | None:intergenic | 50.0% | |
| GCCGTGACTTCATTTATGCC+GGG | + | chr7.3:916935-916954 | None:intergenic | 50.0% | |
| GTACTGAGTCTAAACCCTCC+CGG | - | chr7.3:916914-916933 | MS.gene050650:intron | 50.0% | |
| GTGACTTCATTTATGCCGGG+AGG | + | chr7.3:916932-916951 | None:intergenic | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | + | chr7.3:919331-919350 | None:intergenic | 50.0% | |
| TGCCAAGGTTGTGTTGTGGT+GGG | - | chr7.3:919845-919864 | MS.gene050650:CDS | 50.0% | |
| TGGGTTGTTTGCGTGGTTTG+TGG | - | chr7.3:916230-916249 | MS.gene050650:CDS | 50.0% | |
| TTGTGTGTATGGCTGGACAC+AGG | - | chr7.3:919688-919707 | MS.gene050650:CDS | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr7.3:919396-919415 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr7.3:919033-919052 | MS.gene050650:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr7.3:919052-919033 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | + | chr7.3:919245-919264 | None:intergenic | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | + | chr7.3:919244-919263 | None:intergenic | 50.0% |
| AAAATGGGAGGGGAGGGCTT+TGG | + | chr7.3:919325-919344 | None:intergenic | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | + | chr7.3:919324-919343 | None:intergenic | 55.0% | |
| ACATGCTGGCATGCAAGCTC+AGG | - | chr7.3:916467-916486 | MS.gene050650:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | + | chr7.3:919512-919531 | None:intergenic | 55.0% | |
| CTGCCAAGGTTGTGTTGTGG+TGG | - | chr7.3:919844-919863 | MS.gene050650:CDS | 55.0% | |
| CTGCTGCCAAGGTTGTGTTG+TGG | - | chr7.3:919841-919860 | MS.gene050650:CDS | 55.0% | |
| CTTAGTGGGATAAGGCTCGG+TGG | - | chr7.3:919422-919441 | MS.gene050650:intron | 55.0% | |
| GAAGGGAAAGGTTTGAGGGG+TGG | - | chr7.3:919062-919081 | MS.gene050650:intron | 55.0% | |
| GAGGGGAAGGGAAAGGTTTG+AGG | - | chr7.3:919057-919076 | MS.gene050650:intron | 55.0% | |
| GGGGAAGGGAAAGGTTTGAG+GGG | - | chr7.3:919059-919078 | MS.gene050650:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr7.3:919058-919039 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | - | chr7.3:919039-919058 | MS.gene050650:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7.3:919512-919531 | MS.gene050650:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | - | chr7.3:919038-919057 | MS.gene050650:intron | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | - | chr7.3:919040-919059 | MS.gene050650:intron | 55.0% | |
| ! | CACCGAGCCTTATCCCACTA+AGG | + | chr7.3:919424-919443 | None:intergenic | 55.0% |
| !! | GTAGCCTGTTTCTGCTGCCA+AGG | - | chr7.3:919830-919849 | MS.gene050650:CDS | 55.0% |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | + | chr7.3:919238-919257 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | + | chr7.3:919235-919254 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | + | chr7.3:919234-919253 | None:intergenic | 55.0% |
| AATGGGAGGGGAGGGCTTTG+GGG | + | chr7.3:919323-919342 | None:intergenic | 60.0% | |
| CCATGTAGCCGCCCCAACTT+AGG | - | chr7.3:919012-919031 | MS.gene050650:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr7.3:919392-919411 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr7.3:919391-919410 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr7.3:919045-919064 | MS.gene050650:intron | 60.0% | |
| GTGTAGCCGACCCCACTTAG+TGG | - | chr7.3:919511-919530 | MS.gene050650:intron | 60.0% | |
| ! | CCTAAGTTGGGGCGGCTACA+TGG | + | chr7.3:919015-919034 | None:intergenic | 60.0% |
| ! | GTGTTTGCTGGTGCCCTGCT+TGG | - | chr7.3:919800-919819 | MS.gene050650:CDS | 60.0% |
| CGAGTTTGGAGGGGAGGGGA+AGG | - | chr7.3:919044-919063 | MS.gene050650:intron | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr7.3:919393-919412 | None:intergenic | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | + | chr7.3:919381-919400 | None:intergenic | 65.0% | |
| TGGAGGGGAGGGGAAGGGAA+AGG | - | chr7.3:919050-919069 | MS.gene050650:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr7.3:919387-919406 | None:intergenic | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | + | chr7.3:919322-919341 | None:intergenic | 65.0% |
| GGGGAAGGGAGGGGAAGGCT+TGG | + | chr7.3:919382-919401 | None:intergenic | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr7.3:919321-919340 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 916144 | 919871 | 916144 | ID=MS.gene050650 |
| chr7.3 | mRNA | 916144 | 919871 | 916144 | ID=MS.gene050650.t1;Parent=MS.gene050650 |
| chr7.3 | exon | 919527 | 919871 | 919527 | ID=MS.gene050650.t1.exon1;Parent=MS.gene050650.t1 |
| chr7.3 | CDS | 919527 | 919871 | 919527 | ID=cds.MS.gene050650.t1;Parent=MS.gene050650.t1 |
| chr7.3 | exon | 916144 | 916305 | 916144 | ID=MS.gene050650.t1.exon2;Parent=MS.gene050650.t1 |
| chr7.3 | CDS | 916144 | 916305 | 916144 | ID=cds.MS.gene050650.t1;Parent=MS.gene050650.t1 |
| Gene Sequence |
| Protein sequence |
