Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20541.t1 | XP_003618435.1 | 94 | 969 | 51 | 1 | 1 | 969 | 1 | 962 | 0.00E+00 | 1733.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20541.t1 | O82491 | 67.9 | 971 | 307 | 5 | 1 | 969 | 1 | 968 | 0.0e+00 | 1305.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20541.t1 | G7KK14 | 94.0 | 969 | 51 | 1 | 1 | 969 | 1 | 962 | 0.0e+00 | 1733.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20541 | MS.gene64420 | PPI |
| MS.gene20541 | MS.gene36633 | PPI |
| MS.gene20541 | MS.gene052776 | PPI |
| MS.gene20541 | MS.gene65007 | PPI |
| MS.gene20541 | MS.gene63953 | PPI |
| MS.gene20541 | MS.gene78156 | PPI |
| MS.gene20541 | MS.gene025425 | PPI |
| MS.gene20541 | MS.gene066551 | PPI |
| MS.gene20541 | MS.gene84498 | PPI |
| MS.gene20541 | MS.gene36746 | PPI |
| MS.gene20541 | MS.gene041066 | PPI |
| MS.gene20541 | MS.gene072220 | PPI |
| MS.gene20541 | MS.gene010334 | PPI |
| MS.gene20541 | MS.gene072221 | PPI |
| MS.gene20541 | MS.gene011065 | PPI |
| MS.gene20541 | MS.gene047613 | PPI |
| MS.gene066552 | MS.gene20541 | PPI |
| MS.gene20541 | MS.gene071261 | PPI |
| MS.gene20541 | MS.gene91756 | PPI |
| MS.gene20541 | MS.gene015168 | PPI |
| MS.gene20541 | MS.gene99525 | PPI |
| MS.gene20541 | MS.gene93389 | PPI |
| MS.gene20541 | MS.gene045765 | PPI |
| MS.gene20541 | MS.gene75219 | PPI |
| MS.gene20541 | MS.gene025426 | PPI |
| MS.gene20541 | MS.gene025206 | PPI |
| MS.gene20541 | MS.gene025035 | PPI |
| MS.gene20541 | MS.gene63143 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20541.t1 | MTR_6g009500 | 94.101 | 1068 | 53 | 2 | 1 | 1068 | 1 | 1058 | 0.0 | 1958 |
| MS.gene20541.t1 | MTR_3g064470 | 93.446 | 1068 | 68 | 2 | 1 | 1068 | 1 | 1066 | 0.0 | 1938 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20541.t1 | AT4G10710 | 69.858 | 1055 | 311 | 7 | 1 | 1053 | 1 | 1050 | 0.0 | 1485 |
| MS.gene20541.t1 | AT4G10710 | 69.858 | 1055 | 311 | 7 | 1 | 1053 | 1 | 1050 | 0.0 | 1485 |
| MS.gene20541.t1 | AT4G10710 | 74.290 | 739 | 184 | 6 | 316 | 1053 | 10 | 743 | 0.0 | 1082 |
| MS.gene20541.t1 | AT4G10670 | 67.422 | 353 | 104 | 5 | 554 | 905 | 1 | 343 | 5.82e-164 | 487 |
Find 270 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACATGACAATCGTATTTA+AGG | 0.097345 | 6.3:+5296799 | MS.gene20541:CDS |
| AAGGAAAATTGCTTGATTTA+TGG | 0.112517 | 6.3:+5294650 | MS.gene20541:CDS |
| GTGAAGACCATAATTGTTTC+TGG | 0.153297 | 6.3:-5294400 | None:intergenic |
| CTGTGATCAGCCTTTGATTT+AGG | 0.188286 | 6.3:-5295552 | None:intergenic |
| TGGGGACAACCACAATTTAA+TGG | 0.219173 | 6.3:+5296587 | MS.gene20541:CDS |
| TCTTACATAGCAATTGTTAT+TGG | 0.221999 | 6.3:-5295916 | None:intergenic |
| GGTACCATACTTCCGTTAAT+TGG | 0.227451 | 6.3:-5295849 | None:intergenic |
| CTTTGGATCCGCCCTGGTTT+AGG | 0.244916 | 6.3:+5296197 | MS.gene20541:CDS |
| GTCAAGCAGGAAACCATTTC+AGG | 0.256151 | 6.3:-5295246 | None:intergenic |
| AAAATAGAGCAGTAGATTTC+AGG | 0.256925 | 6.3:-5294354 | None:intergenic |
| AGGAAAATTGCTTGATTTAT+GGG | 0.258159 | 6.3:+5294651 | MS.gene20541:CDS |
| CCTTGGAACTTCAATAAGTT+TGG | 0.260047 | 6.3:-5295981 | None:intergenic |
| TCCTCTTCAGAGTCTGATTC+AGG | 0.274402 | 6.3:-5297085 | None:intergenic |
| GGAAGACTCTCAGGAGGATT+TGG | 0.280445 | 6.3:+5297156 | MS.gene20541:CDS |
| TTCCAGGTCTTCTGCAGAAT+TGG | 0.283033 | 6.3:+5295743 | MS.gene20541:CDS |
| CTTAGAGAACTTGGCTTCCC+TGG | 0.287547 | 6.3:+5296635 | MS.gene20541:CDS |
| TCTTCCCAGCTCCAACATTC+TGG | 0.294434 | 6.3:-5296457 | None:intergenic |
| GAAGAATGCATGTTTAATAT+TGG | 0.302339 | 6.3:-5296318 | None:intergenic |
| TCATCTGCACAACCATATTA+TGG | 0.305128 | 6.3:+5296379 | MS.gene20541:CDS |
| TGAATCGGGTAAATGATCTT+TGG | 0.308578 | 6.3:+5296567 | MS.gene20541:CDS |
| GCAGCAGCCAATTGGTTTCC+AGG | 0.308876 | 6.3:-5295186 | None:intergenic |
| GTGGAGGGAGGTTTGATCTT+AGG | 0.316975 | 6.3:+5294971 | MS.gene20541:CDS |
| TGTTCTTCTTCAAGCTCATC+AGG | 0.321304 | 6.3:-5296494 | None:intergenic |
| TGGCAAGCTGCAGTTTCTCC+TGG | 0.334385 | 6.3:-5296142 | None:intergenic |
| TGACGATGGAGCTTCTCTTA+TGG | 0.336154 | 6.3:+5294540 | MS.gene20541:CDS |
| CAAGAATAGATGCCTTCTTT+TGG | 0.342506 | 6.3:-5294450 | None:intergenic |
| GAGACAACCGTTCCTCTTCC+AGG | 0.342937 | 6.3:+5295727 | MS.gene20541:CDS |
| GAATCGGGTAAATGATCTTT+GGG | 0.343377 | 6.3:+5296568 | MS.gene20541:CDS |
| ATCTCTTCTACATCACTTGA+TGG | 0.343927 | 6.3:+5296854 | MS.gene20541:CDS |
| CTTGCCAATTAACGGAAGTA+TGG | 0.345033 | 6.3:+5295845 | MS.gene20541:CDS |
| AACATAAAACTGAACATCTT+TGG | 0.350090 | 6.3:-5296417 | None:intergenic |
| TCCTGCTTGACAAAGTCTGC+TGG | 0.361921 | 6.3:+5295258 | MS.gene20541:CDS |
| GAGGTATGCGGCTCTCTTAA+TGG | 0.367195 | 6.3:-5294767 | None:intergenic |
| TGCGATCCATCAAAACATTC+AGG | 0.373260 | 6.3:+5296066 | MS.gene20541:CDS |
| GGTCATCTGTGATTGTCTTC+AGG | 0.375295 | 6.3:-5296949 | None:intergenic |
| GGTATTGAGTTTCGAGAGTC+TGG | 0.379234 | 6.3:+5295291 | MS.gene20541:CDS |
| GGCCTTGATTCTTCCATTGT+CGG | 0.381691 | 6.3:+5294604 | MS.gene20541:CDS |
| GAGAGCTGAGAGAGCTACTT+TGG | 0.384218 | 6.3:+5296115 | MS.gene20541:CDS |
| CGTACTCAGTCAAAGTCTTA+TGG | 0.387559 | 6.3:+5294583 | MS.gene20541:CDS |
| AGTTTACAGTTGACGTTTGA+AGG | 0.396222 | 6.3:-5294904 | None:intergenic |
| AACAATAATCTATCTTAACT+TGG | 0.396397 | 6.3:-5297344 | None:intergenic |
| TCCTAGGGAGATGATGATTC+AGG | 0.398265 | 6.3:+5295797 | MS.gene20541:CDS |
| CAAAGGTCAGGCAATCTTAT+CGG | 0.398432 | 6.3:-5296179 | None:intergenic |
| TATCTTAACTTGGGCCGCTT+TGG | 0.399183 | 6.3:-5297334 | None:intergenic |
| TCGTAAGCCTTACTTTGAAT+AGG | 0.400060 | 6.3:-5295120 | None:intergenic |
| CGATAAGATTGCCTGACCTT+TGG | 0.400151 | 6.3:+5296180 | MS.gene20541:CDS |
| TGAGATTGAGATTGTGAATC+TGG | 0.401650 | 6.3:+5296748 | MS.gene20541:CDS |
| TATCGGCTTAAATATGTTGT+TGG | 0.402569 | 6.3:-5296162 | None:intergenic |
| AATCTAAGTGACGTGACAAA+TGG | 0.403730 | 6.3:+5294700 | MS.gene20541:CDS |
| TTTAAATTCTACATTGATGA+AGG | 0.404803 | 6.3:+5294858 | MS.gene20541:CDS |
| GGGATGCAAGCAATGCAGAT+AGG | 0.412920 | 6.3:+5297215 | MS.gene20541:CDS |
| TGCAGAACCTATTCAAAGTA+AGG | 0.413858 | 6.3:+5295113 | MS.gene20541:CDS |
| TTAGAGAACTTGGCTTCCCT+GGG | 0.414546 | 6.3:+5296636 | MS.gene20541:CDS |
| CAAGATATGCAGCAGCCAAT+TGG | 0.415420 | 6.3:-5295194 | None:intergenic |
| ATGAAAACAGGACAGATCTC+TGG | 0.416842 | 6.3:+5294275 | MS.gene20541:CDS |
| GCGGTTCTCTTGCCAATTAA+CGG | 0.426580 | 6.3:+5295837 | MS.gene20541:CDS |
| GCTTCATTGAAGGTGGTGGC+TGG | 0.426732 | 6.3:+5296978 | MS.gene20541:CDS |
| AATTTCAAAGATTTGTGAAT+CGG | 0.427034 | 6.3:+5296552 | MS.gene20541:CDS |
| GGGAAAGACATGGGAAGAAC+TGG | 0.427824 | 6.3:+5297189 | MS.gene20541:CDS |
| GTCATTGGTTCTTTAAAGCC+TGG | 0.430337 | 6.3:+5295168 | MS.gene20541:CDS |
| ATAAACATTGGGATGAAAAC+AGG | 0.432905 | 6.3:+5294263 | MS.gene20541:CDS |
| CACCTTCAATGAAGCTTTGA+GGG | 0.435984 | 6.3:-5296970 | None:intergenic |
| ACTTATGTGCCGTGAATCCT+TGG | 0.437509 | 6.3:-5296036 | None:intergenic |
| CTCCACACCAACCGACTCTC+TGG | 0.437750 | 6.3:-5294491 | None:intergenic |
| TGAAGACCATAATTGTTTCT+GGG | 0.437882 | 6.3:-5294399 | None:intergenic |
| GAAACTGCTAGGCGACTTGC+TGG | 0.440887 | 6.3:+5295687 | MS.gene20541:CDS |
| GGAAAAGGAGGCCCCTGAAA+TGG | 0.443343 | 6.3:+5295233 | MS.gene20541:CDS |
| TGCAGTTTCTGTTGTGGAAA+AGG | 0.444159 | 6.3:+5295218 | MS.gene20541:CDS |
| GGAGGATTTGGAGGAAGAGC+AGG | 0.444573 | 6.3:+5297168 | MS.gene20541:CDS |
| AAGGCGGCCTTTGGTAAATC+AGG | 0.445444 | 6.3:+5297289 | MS.gene20541:CDS |
| TTTAAAGCCTGGAAACCAAT+TGG | 0.445903 | 6.3:+5295179 | MS.gene20541:CDS |
| TAAGTTTGGATCGTGAGAAC+TGG | 0.446172 | 6.3:-5295967 | None:intergenic |
| CGAGTTCCCAGAAACAATTA+TGG | 0.447496 | 6.3:+5294393 | MS.gene20541:CDS |
| GGCTCAGAGGAATCTGATAA+AGG | 0.447828 | 6.3:+5297040 | MS.gene20541:CDS |
| AATGGAAAAGCTAGTGCAGC+TGG | 0.449250 | 6.3:+5294187 | MS.gene20541:CDS |
| TGAGAACTGGAAGGGGTCCC+AGG | 0.450832 | 6.3:-5295954 | None:intergenic |
| CCAAGGATCTATATATTTGA+AGG | 0.451091 | 6.3:+5295998 | MS.gene20541:CDS |
| GGAGCTCCGGAGACAGCATC+AGG | 0.451912 | 6.3:+5295638 | MS.gene20541:CDS |
| CTTGTGCACTTCCATTTCGA+TGG | 0.452650 | 6.3:-5294159 | None:intergenic |
| CTCTTGAGACACATGTGAAT+GGG | 0.456520 | 6.3:+5296246 | MS.gene20541:CDS |
| TTCCTCCTCCTCGTCCTCCT+CGG | 0.458028 | 6.3:-5297137 | None:intergenic |
| AAAGCCCATGAGGCCGTCAT+TGG | 0.459820 | 6.3:+5295153 | MS.gene20541:CDS |
| TTTATACAACGTCTTCAGTC+TGG | 0.459954 | 6.3:-5294245 | None:intergenic |
| ATTTCAAAGATTTGTGAATC+GGG | 0.460388 | 6.3:+5296553 | MS.gene20541:CDS |
| GATCAACCTCTTAGAGAACT+TGG | 0.462116 | 6.3:+5296626 | MS.gene20541:CDS |
| ATCAGATTCCTCTGAGCCCT+CGG | 0.463273 | 6.3:-5297035 | None:intergenic |
| AATTGTTATTGGTGTCCTGC+TGG | 0.463800 | 6.3:-5295905 | None:intergenic |
| AGGAAGGCTAAGGCGGCCTT+TGG | 0.465866 | 6.3:+5297280 | MS.gene20541:CDS |
| ACAATTTAATGGCCTTGACT+TGG | 0.466622 | 6.3:+5296598 | MS.gene20541:CDS |
| AGTCTGACAGTGAGGAAGAT+AGG | 0.470176 | 6.3:+5297251 | MS.gene20541:CDS |
| CCTTCAAATATATAGATCCT+TGG | 0.470928 | 6.3:-5295998 | None:intergenic |
| GGAGACTGAGAAAGTCATAC+TGG | 0.475214 | 6.3:+5294879 | MS.gene20541:CDS |
| GTTATTGGTGTCCTGCTGGC+TGG | 0.475339 | 6.3:-5295901 | None:intergenic |
| GTCCGAGGAGGACGAGGAGG+AGG | 0.476907 | 6.3:+5297135 | MS.gene20541:CDS |
| GGATGCAAGCAATGCAGATA+GGG | 0.478405 | 6.3:+5297216 | MS.gene20541:CDS |
| CCTGACCTTTGGATCCGCCC+TGG | 0.479100 | 6.3:+5296191 | MS.gene20541:CDS |
| AATCTGGAGAGGGTTGGACT+TGG | 0.479465 | 6.3:+5296764 | MS.gene20541:CDS |
| ATCTAAGTGACGTGACAAAT+GGG | 0.480868 | 6.3:+5294701 | MS.gene20541:CDS |
| ATCAACACGCTCATCAGATC+TGG | 0.480897 | 6.3:-5296285 | None:intergenic |
| AAAGCAGGCTGAATCTGAAC+TGG | 0.481733 | 6.3:+5296918 | MS.gene20541:CDS |
| GGCAAGCTGCAGTTTCTCCT+GGG | 0.483451 | 6.3:-5296141 | None:intergenic |
| CCCAGCAGACTTTGTCAAGC+AGG | 0.483760 | 6.3:-5295259 | None:intergenic |
| TTTCAATGAGGACGAGGAAG+AGG | 0.484209 | 6.3:+5295524 | MS.gene20541:CDS |
| GTGAGGAAGATAGGAAAAGA+AGG | 0.484945 | 6.3:+5297260 | MS.gene20541:CDS |
| ACTCTTGAGACACATGTGAA+TGG | 0.486099 | 6.3:+5296245 | MS.gene20541:CDS |
| CGCCCTGGTTTAGGTGGACG+TGG | 0.486858 | 6.3:+5296206 | MS.gene20541:CDS |
| ATGGTCCAGAATGTTGGAGC+TGG | 0.487822 | 6.3:+5296452 | MS.gene20541:CDS |
| CAATCATGAGATTTCAAAAG+AGG | 0.489214 | 6.3:+5295617 | MS.gene20541:CDS |
| AGTGTGATTATATGTGCTCT+TGG | 0.493989 | 6.3:+5295039 | MS.gene20541:CDS |
| GAAGACGTTGTATAAACATT+GGG | 0.494826 | 6.3:+5294252 | MS.gene20541:CDS |
| CCACCTTCAATGAAGCTTTG+AGG | 0.498853 | 6.3:-5296971 | None:intergenic |
| GGAAGTGCACAAGGCGCCAA+TGG | 0.499252 | 6.3:+5294169 | MS.gene20541:CDS |
| ACCATGGCAGACCATCGAAA+TGG | 0.499627 | 6.3:+5294148 | None:intergenic |
| AGCAATGCAGATAGGGAGAA+AGG | 0.500266 | 6.3:+5297223 | MS.gene20541:CDS |
| ACTTCAAGCGGGATGTCCTC+AGG | 0.502764 | 6.3:+5296822 | MS.gene20541:CDS |
| CGAGGAGGAGGAAGACTCTC+AGG | 0.504971 | 6.3:+5297147 | MS.gene20541:CDS |
| CATTCCGCTCCAAGGATTCA+CGG | 0.505038 | 6.3:+5296027 | MS.gene20541:CDS |
| AAGGTCGTAAATGTTCTTGT+AGG | 0.506065 | 6.3:-5295769 | None:intergenic |
| TGGTGTCTAAGACAACTCTA+AGG | 0.507161 | 6.3:+5295589 | MS.gene20541:CDS |
| TTTGATCTTAGGCGTAGTGC+TGG | 0.507228 | 6.3:+5294982 | MS.gene20541:CDS |
| TGAAAACAGGACAGATCTCT+GGG | 0.510194 | 6.3:+5294276 | MS.gene20541:CDS |
| CTCCAAAGCTTTAAAAGATG+TGG | 0.510395 | 6.3:+5295494 | MS.gene20541:CDS |
| AAGTCTGCTGGGACAGGCAT+TGG | 0.511350 | 6.3:+5295270 | MS.gene20541:CDS |
| AGACTCTCAGGAGGATTTGG+AGG | 0.511997 | 6.3:+5297159 | MS.gene20541:CDS |
| TCGAACTGTTTCCAGCCAGC+AGG | 0.512908 | 6.3:+5295890 | MS.gene20541:CDS |
| AGATTTCAAAAGAGGAGCTC+CGG | 0.513527 | 6.3:+5295625 | MS.gene20541:CDS |
| GTTCTGCCTGATGCTGTCTC+CGG | 0.514568 | 6.3:-5295644 | None:intergenic |
| TATCTTGTGCAGCCAAAAGA+AGG | 0.514874 | 6.3:+5294438 | MS.gene20541:CDS |
| TTGACAAAGTCTGCTGGGAC+AGG | 0.514882 | 6.3:+5295264 | MS.gene20541:CDS |
| TCTTGCTGCAGTTTCTGTTG+TGG | 0.516571 | 6.3:+5295212 | MS.gene20541:CDS |
| AACCAATTCTGCAGAAGACC+TGG | 0.517570 | 6.3:-5295745 | None:intergenic |
| GACCCTCAAAGCTTCATTGA+AGG | 0.517589 | 6.3:+5296968 | MS.gene20541:CDS |
| TCAAGCAGGAAACCATTTCA+GGG | 0.519353 | 6.3:-5295245 | None:intergenic |
| CCTGCTTGACAAAGTCTGCT+GGG | 0.520875 | 6.3:+5295259 | MS.gene20541:CDS |
| TCACAGTGGTACAGAGCTCT+TGG | 0.522311 | 6.3:+5295569 | MS.gene20541:CDS |
| TGCCAGAGAGTCGGTTGGTG+TGG | 0.524622 | 6.3:+5294489 | MS.gene20541:CDS |
| ATAAATACTGAAGATTTATG+AGG | 0.524990 | 6.3:-5296662 | None:intergenic |
| ATCTGGAGAGGGTTGGACTT+GGG | 0.528041 | 6.3:+5296765 | MS.gene20541:CDS |
| TACATCACTTGATGGCATCA+AGG | 0.528132 | 6.3:+5296862 | MS.gene20541:CDS |
| CTTGTCTTTGTCGATGATGA+CGG | 0.529044 | 6.3:-5295448 | None:intergenic |
| TGAAGACGTTGTATAAACAT+TGG | 0.532003 | 6.3:+5294251 | MS.gene20541:CDS |
| TGGACGTGGAAGGAAGATAC+CGG | 0.532183 | 6.3:+5296220 | MS.gene20541:CDS |
| CTTCATTGAAGGTGGTGGCT+GGG | 0.532185 | 6.3:+5296979 | MS.gene20541:CDS |
| ATGGCATTCAATGTGTCGCT+TGG | 0.532993 | 6.3:+5295357 | MS.gene20541:CDS |
| AAGAACCAATGACGGCCTCA+TGG | 0.533120 | 6.3:-5295158 | None:intergenic |
| CAAAGCTTCATTGAAGGTGG+TGG | 0.533442 | 6.3:+5296974 | MS.gene20541:CDS |
| CCAGGGCGGATCCAAAGGTC+AGG | 0.534315 | 6.3:-5296191 | None:intergenic |
| AGAACCAATGACGGCCTCAT+GGG | 0.536141 | 6.3:-5295157 | None:intergenic |
| AAGAACAAAGAGAAAGAGAG+AGG | 0.536590 | 6.3:+5296510 | MS.gene20541:CDS |
| TGTTGAGTCCGAGGAGGACG+AGG | 0.539234 | 6.3:+5297129 | MS.gene20541:CDS |
| CCAAACTTATTGAAGTTCCA+AGG | 0.539810 | 6.3:+5295981 | MS.gene20541:CDS |
| TCCATTTCGATGGTCTGCCA+TGG | 0.540730 | 6.3:-5294149 | None:intergenic |
| TTGAGCAGTAGCTCTTGTAC+CGG | 0.544780 | 6.3:-5295065 | None:intergenic |
| CATCGAAATGGAAGTGCACA+AGG | 0.545440 | 6.3:+5294160 | MS.gene20541:CDS |
| GGAAGATAGGAAAAGAAGGA+AGG | 0.545534 | 6.3:+5297264 | MS.gene20541:CDS |
| ACACCAACCGACTCTCTGGC+AGG | 0.546248 | 6.3:-5294487 | None:intergenic |
| GAAGATTTATGAGGTACCCC+AGG | 0.548093 | 6.3:-5296653 | None:intergenic |
| ATGGACATGGTCCAGAATGT+TGG | 0.549560 | 6.3:+5296446 | MS.gene20541:CDS |
| ACATCAAATATTATGAAAGC+AGG | 0.549784 | 6.3:+5296903 | MS.gene20541:CDS |
| CTGGTTTAGGTGGACGTGGA+AGG | 0.552209 | 6.3:+5296210 | MS.gene20541:CDS |
| CGTATTTAAGGACTTCAAGC+GGG | 0.554257 | 6.3:+5296811 | MS.gene20541:CDS |
| AATGATCAGATAGTTAAAGA+AGG | 0.554683 | 6.3:+5295333 | MS.gene20541:CDS |
| CTTCCACGTCCACCTAAACC+AGG | 0.555242 | 6.3:-5296209 | None:intergenic |
| ACAATAATCTATCTTAACTT+GGG | 0.557064 | 6.3:-5297343 | None:intergenic |
| TGGATCCGCCCTGGTTTAGG+TGG | 0.557660 | 6.3:+5296200 | MS.gene20541:CDS |
| TCTTCATCACATTGGTTGTG+AGG | 0.558042 | 6.3:-5294786 | None:intergenic |
| TTGAGATTGTGAATCTGGAG+AGG | 0.558637 | 6.3:+5296753 | MS.gene20541:CDS |
| TCTAGCTATGTGTCCGACAA+TGG | 0.559049 | 6.3:-5294617 | None:intergenic |
| CTTAGAGTGGCAACAAGGAA+AGG | 0.559301 | 6.3:-5296725 | None:intergenic |
| ACATGTGTCTCAAGAGTGCC+CGG | 0.560707 | 6.3:-5296239 | None:intergenic |
| CGAATGAAAGCCACATGGAA+AGG | 0.561401 | 6.3:-5295870 | None:intergenic |
| TTATATGTGCTCTTGGAGCC+CGG | 0.561727 | 6.3:+5295046 | MS.gene20541:CDS |
| GTCCGACAATGGAAGAATCA+AGG | 0.563534 | 6.3:-5294606 | None:intergenic |
| GCAATGCAGATAGGGAGAAA+GGG | 0.565681 | 6.3:+5297224 | MS.gene20541:CDS |
| TCAACAAGGCAAGCTGAAGT+AGG | 0.568242 | 6.3:-5296689 | None:intergenic |
| GGAAGCTTCATTCCGCTCCA+AGG | 0.569438 | 6.3:+5296019 | MS.gene20541:CDS |
| CTAAACCAGGGCGGATCCAA+AGG | 0.569755 | 6.3:-5296196 | None:intergenic |
| TACGAAGTTCTTCATCACAT+TGG | 0.572021 | 6.3:-5294794 | None:intergenic |
| GGGAAGCCAAGTTCTCTAAG+AGG | 0.574284 | 6.3:-5296632 | None:intergenic |
| AACAATTATGGTCTTCACAA+AGG | 0.575117 | 6.3:+5294405 | MS.gene20541:CDS |
| AGCTACTGATTCAGAATCCG+AGG | 0.576815 | 6.3:+5297018 | MS.gene20541:CDS |
| GAATCATCATCTCCCTAGGA+GGG | 0.578278 | 6.3:-5295794 | None:intergenic |
| GAGAGCTACTTTGGTTACCC+AGG | 0.578848 | 6.3:+5296124 | MS.gene20541:CDS |
| GCTAGGCGACTTGCTGGTGG+TGG | 0.579288 | 6.3:+5295693 | MS.gene20541:CDS |
| TGAGCAGTAGCTCTTGTACC+GGG | 0.581429 | 6.3:-5295064 | None:intergenic |
| TGAGATTGTGAATCTGGAGA+GGG | 0.582848 | 6.3:+5296754 | MS.gene20541:CDS |
| CTGCACAACCATATTATGGT+AGG | 0.583831 | 6.3:+5296383 | MS.gene20541:CDS |
| AGGAAGAGCAGGGAAAGACA+TGG | 0.583908 | 6.3:+5297179 | MS.gene20541:CDS |
| TGGTCCAGAATGTTGGAGCT+GGG | 0.585117 | 6.3:+5296453 | MS.gene20541:CDS |
| GACATGGGAAGAACTGGAGA+GGG | 0.587672 | 6.3:+5297195 | MS.gene20541:CDS |
| TTATGTTGAGGTAATGGACA+TGG | 0.591059 | 6.3:+5296433 | MS.gene20541:CDS |
| TTGGATCGTGAGAACTGGAA+GGG | 0.592763 | 6.3:-5295962 | None:intergenic |
| TTCTGCAGAAGACCTGGAAG+AGG | 0.593256 | 6.3:-5295739 | None:intergenic |
| ATCATCATCTCCCTAGGAGG+GGG | 0.597621 | 6.3:-5295792 | None:intergenic |
| TCGTATTTAAGGACTTCAAG+CGG | 0.597873 | 6.3:+5296810 | MS.gene20541:CDS |
| AAGTCAAGGCCATTAAATTG+TGG | 0.598223 | 6.3:-5296596 | None:intergenic |
| GATTCAGGTTCAATATCTGA+AGG | 0.598827 | 6.3:-5297070 | None:intergenic |
| TGTGGCTTATTCTTTCAATG+AGG | 0.600732 | 6.3:+5295512 | MS.gene20541:CDS |
| TGCATCACTTGTTGAGTCCG+AGG | 0.602363 | 6.3:+5297120 | MS.gene20541:CDS |
| ATTGCCTCCTGATTTACCAA+AGG | 0.604202 | 6.3:-5297296 | None:intergenic |
| CACTTGATGGCATCAAGGAG+TGG | 0.604894 | 6.3:+5296867 | MS.gene20541:CDS |
| TCAGATAGTTAAAGAAGGCA+TGG | 0.606496 | 6.3:+5295338 | MS.gene20541:CDS |
| TGTATTCAGATCAATAGCAT+AGG | 0.607701 | 6.3:-5294215 | None:intergenic |
| CAGGAAACAAGTTGTAGCGA+GGG | 0.609384 | 6.3:+5296085 | MS.gene20541:CDS |
| TTATTCTTTCAATGAGGACG+AGG | 0.609631 | 6.3:+5295518 | MS.gene20541:CDS |
| ACCTGAATCATCATCTCCCT+AGG | 0.610045 | 6.3:-5295798 | None:intergenic |
| AGACTTTGACTGAGTACGAA+TGG | 0.610793 | 6.3:-5294578 | None:intergenic |
| ACCTGAATCAGACTCTGAAG+AGG | 0.611399 | 6.3:+5297084 | MS.gene20541:CDS |
| TATTCAAAGTAAGGCTTACG+AGG | 0.612623 | 6.3:+5295122 | MS.gene20541:CDS |
| AGGCTTTAAAGAACCAATGA+CGG | 0.612730 | 6.3:-5295166 | None:intergenic |
| GGTTGATCAAAAGAATGAAG+CGG | 0.613939 | 6.3:+5295818 | MS.gene20541:CDS |
| AATCTCAATCTCACTTAGAG+TGG | 0.614403 | 6.3:-5296738 | None:intergenic |
| TGAATCAGACTCTGAAGAGG+AGG | 0.614954 | 6.3:+5297087 | MS.gene20541:CDS |
| TGAATCATCATCTCCCTAGG+AGG | 0.615537 | 6.3:-5295795 | None:intergenic |
| CCTCAAAGCTTCATTGAAGG+TGG | 0.617669 | 6.3:+5296971 | MS.gene20541:CDS |
| AGTTTCTGTTGTGGAAAAGG+AGG | 0.617751 | 6.3:+5295221 | MS.gene20541:CDS |
| GTTGATCAAACTCCAAGTCA+AGG | 0.619153 | 6.3:-5296610 | None:intergenic |
| TAGGAAAAGAAGGAAGGCTA+AGG | 0.620985 | 6.3:+5297270 | MS.gene20541:CDS |
| ATGGAAAAGCTAGTGCAGCT+GGG | 0.621264 | 6.3:+5294188 | MS.gene20541:CDS |
| TGGATCGTGAGAACTGGAAG+GGG | 0.621997 | 6.3:-5295961 | None:intergenic |
| AATCATCATCTCCCTAGGAG+GGG | 0.623048 | 6.3:-5295793 | None:intergenic |
| TTGACTGAGTACGAATGGCA+CGG | 0.623097 | 6.3:-5294573 | None:intergenic |
| AAACGTCAACTGTAAACTGA+AGG | 0.623223 | 6.3:+5294909 | MS.gene20541:CDS |
| AAAAGCTAGTGCAGCTGGGT+CGG | 0.623884 | 6.3:+5294192 | MS.gene20541:CDS |
| TTTGGATCGTGAGAACTGGA+AGG | 0.626530 | 6.3:-5295963 | None:intergenic |
| CACATTGGTTGTGAGGTATG+CGG | 0.627960 | 6.3:-5294779 | None:intergenic |
| GAGGATTTGGAGGAAGAGCA+GGG | 0.630269 | 6.3:+5297169 | MS.gene20541:CDS |
| GGAAGAGCAGGGAAAGACAT+GGG | 0.631705 | 6.3:+5297180 | MS.gene20541:CDS |
| ATTGTGAATCTGGAGAGGGT+TGG | 0.633378 | 6.3:+5296758 | MS.gene20541:CDS |
| TGTCGGACACATAGCTAGAG+AGG | 0.635058 | 6.3:+5294621 | MS.gene20541:CDS |
| TGAGTCCGAGGAGGACGAGG+AGG | 0.636730 | 6.3:+5297132 | MS.gene20541:CDS |
| TCAGGAAACAAGTTGTAGCG+AGG | 0.637362 | 6.3:+5296084 | MS.gene20541:CDS |
| CAGAAGACCTGGAAGAGGAA+CGG | 0.638461 | 6.3:-5295734 | None:intergenic |
| GAAAAGAAGGAAGGCTAAGG+CGG | 0.641022 | 6.3:+5297273 | MS.gene20541:CDS |
| AACACGCTCATCAGATCTGG+TGG | 0.641662 | 6.3:-5296282 | None:intergenic |
| AGACATGGGAAGAACTGGAG+AGG | 0.643960 | 6.3:+5297194 | MS.gene20541:CDS |
| TCTCACTTAGAGTGGCAACA+AGG | 0.647751 | 6.3:-5296730 | None:intergenic |
| TTCAGAATCCGAGGGCTCAG+AGG | 0.648895 | 6.3:+5297027 | MS.gene20541:CDS |
| TAGAGAACTTGGCTTCCCTG+GGG | 0.652695 | 6.3:+5296637 | MS.gene20541:CDS |
| AGGGAACGAGTCTGACAGTG+AGG | 0.655246 | 6.3:+5297243 | MS.gene20541:CDS |
| GCGGCCTTTGGTAAATCAGG+AGG | 0.655815 | 6.3:+5297292 | MS.gene20541:CDS |
| GGTTGTGCAGATGAAAGTGC+AGG | 0.656548 | 6.3:-5296370 | None:intergenic |
| GGAGGAGGAAGACTCTCAGG+AGG | 0.656861 | 6.3:+5297150 | MS.gene20541:CDS |
| CAGTTCGAATGAAAGCCACA+TGG | 0.657920 | 6.3:-5295875 | None:intergenic |
| AATCGGGTAAATGATCTTTG+GGG | 0.658631 | 6.3:+5296569 | MS.gene20541:CDS |
| GAACAGTAAGTCTAAGAACA+AGG | 0.659531 | 6.3:+5295401 | MS.gene20541:CDS |
| CAAGCAGGAAACCATTTCAG+GGG | 0.660504 | 6.3:-5295244 | None:intergenic |
| AAGCCTGCCAGAGAGTCGGT+TGG | 0.662622 | 6.3:+5294484 | MS.gene20541:CDS |
| GGATTCACGGCACATAAGTG+AGG | 0.665602 | 6.3:+5296040 | MS.gene20541:CDS |
| ACTGCTAGGCGACTTGCTGG+TGG | 0.668114 | 6.3:+5295690 | MS.gene20541:CDS |
| TAGTGCTGGCAGCAACGACG+AGG | 0.668390 | 6.3:+5294996 | MS.gene20541:CDS |
| GTGCAGATGAAAGTGCAGGA+GGG | 0.672573 | 6.3:-5296366 | None:intergenic |
| CGACAAAGACAAGACAGATG+TGG | 0.673498 | 6.3:+5295458 | MS.gene20541:CDS |
| GCTACTGATTCAGAATCCGA+GGG | 0.674139 | 6.3:+5297019 | MS.gene20541:CDS |
| GGACGTGGAAGGAAGATACC+GGG | 0.674802 | 6.3:+5296221 | MS.gene20541:CDS |
| AAGAGCACATATAATCACAC+TGG | 0.676948 | 6.3:-5295037 | None:intergenic |
| AAGATTTATGAGGTACCCCA+GGG | 0.681332 | 6.3:-5296652 | None:intergenic |
| AAGAGATAGAATCAATCCTG+AGG | 0.690939 | 6.3:-5296838 | None:intergenic |
| AAGTATGGTACCTTTCCATG+TGG | 0.695144 | 6.3:+5295860 | MS.gene20541:CDS |
| ATAGCTAGAGAGGAACCTGA+AGG | 0.698763 | 6.3:+5294631 | MS.gene20541:CDS |
| TGTGCAGATGAAAGTGCAGG+AGG | 0.701443 | 6.3:-5296367 | None:intergenic |
| TGTGCCGTGAATCCTTGGAG+CGG | 0.707311 | 6.3:-5296031 | None:intergenic |
| TAAGCAGTAGCATGCCAAAG+CGG | 0.707963 | 6.3:+5297320 | MS.gene20541:CDS |
| TTCCACGTCCACCTAAACCA+GGG | 0.710560 | 6.3:-5296208 | None:intergenic |
| GAGTCTCTATCAGTTCAACA+AGG | 0.714546 | 6.3:-5296703 | None:intergenic |
| ATCACTTGTTGAGTCCGAGG+AGG | 0.720059 | 6.3:+5297123 | MS.gene20541:CDS |
| GGTTCTTCTCAAAGCCCATG+AGG | 0.731911 | 6.3:+5295143 | MS.gene20541:CDS |
| CACGTCCACCTAAACCAGGG+CGG | 0.747014 | 6.3:-5296205 | None:intergenic |
| AAATCAAAGGCTGATCACAG+TGG | 0.769347 | 6.3:+5295555 | MS.gene20541:CDS |
| GAAAACAGGACAGATCTCTG+GGG | 0.772361 | 6.3:+5294277 | MS.gene20541:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAAAGATTTGTGAAT+CGG | + | chr6.3:5296552-5296571 | MS.gene20541:CDS | 20.0% |
| !! | ATAAATACTGAAGATTTATG+AGG | - | chr6.3:5296665-5296684 | None:intergenic | 20.0% |
| !! | TTTAAATTCTACATTGATGA+AGG | + | chr6.3:5294858-5294877 | MS.gene20541:CDS | 20.0% |
| !!! | TTTTATTTCCTACCATAATA+TGG | - | chr6.3:5296394-5296413 | None:intergenic | 20.0% |
| ! | AACATAAAACTGAACATCTT+TGG | - | chr6.3:5296420-5296439 | None:intergenic | 25.0% |
| ! | AAGGAAAATTGCTTGATTTA+TGG | + | chr6.3:5294650-5294669 | MS.gene20541:CDS | 25.0% |
| ! | AATGATCAGATAGTTAAAGA+AGG | + | chr6.3:5295333-5295352 | MS.gene20541:CDS | 25.0% |
| ! | ACATCAAATATTATGAAAGC+AGG | + | chr6.3:5296903-5296922 | MS.gene20541:CDS | 25.0% |
| ! | AGGAAAATTGCTTGATTTAT+GGG | + | chr6.3:5294651-5294670 | MS.gene20541:CDS | 25.0% |
| ! | ATTTCAAAGATTTGTGAATC+GGG | + | chr6.3:5296553-5296572 | MS.gene20541:CDS | 25.0% |
| ! | GAAGAATGCATGTTTAATAT+TGG | - | chr6.3:5296321-5296340 | None:intergenic | 25.0% |
| ! | TCTTACATAGCAATTGTTAT+TGG | - | chr6.3:5295919-5295938 | None:intergenic | 25.0% |
| !! | AGGTATCTTATATCTTTTGA+AGG | - | chr6.3:5294337-5294356 | None:intergenic | 25.0% |
| !!! | AGAATTATTTTTAACGTTCC+TGG | + | chr6.3:5295936-5295955 | MS.gene20541:CDS | 25.0% |
| !!! | GAATTATTTTTAACGTTCCT+GGG | + | chr6.3:5295937-5295956 | MS.gene20541:CDS | 25.0% |
| !!! | TATCTTATATCTTTTGAAGG+TGG | - | chr6.3:5294334-5294353 | None:intergenic | 25.0% |
| AAAATAGAGCAGTAGATTTC+AGG | - | chr6.3:5294357-5294376 | None:intergenic | 30.0% | |
| AACAATTATGGTCTTCACAA+AGG | + | chr6.3:5294405-5294424 | MS.gene20541:CDS | 30.0% | |
| AGAGGAAAAACCTAAATCAA+AGG | + | chr6.3:5295542-5295561 | MS.gene20541:CDS | 30.0% | |
| ATAAACATTGGGATGAAAAC+AGG | + | chr6.3:5294263-5294282 | MS.gene20541:CDS | 30.0% | |
| CAATCATGAGATTTCAAAAG+AGG | + | chr6.3:5295617-5295636 | MS.gene20541:CDS | 30.0% | |
| CCAAGGATCTATATATTTGA+AGG | + | chr6.3:5295998-5296017 | MS.gene20541:CDS | 30.0% | |
| CCTTCAAATATATAGATCCT+TGG | - | chr6.3:5296001-5296020 | None:intergenic | 30.0% | |
| GAAGACGTTGTATAAACATT+GGG | + | chr6.3:5294252-5294271 | MS.gene20541:CDS | 30.0% | |
| TGAAGACGTTGTATAAACAT+TGG | + | chr6.3:5294251-5294270 | MS.gene20541:CDS | 30.0% | |
| TGACATGACAATCGTATTTA+AGG | + | chr6.3:5296799-5296818 | MS.gene20541:CDS | 30.0% | |
| TGTATTCAGATCAATAGCAT+AGG | - | chr6.3:5294218-5294237 | None:intergenic | 30.0% | |
| ! | AAATCAAGCAATTTTCCTTC+AGG | - | chr6.3:5294649-5294668 | None:intergenic | 30.0% |
| ! | GTAATCATTTCATTTTCTGC+TGG | - | chr6.3:5296347-5296366 | None:intergenic | 30.0% |
| ! | TGAAGACCATAATTGTTTCT+GGG | - | chr6.3:5294402-5294421 | None:intergenic | 30.0% |
| !! | AGATGTTCAGTTTTATGTTG+AGG | + | chr6.3:5296421-5296440 | MS.gene20541:CDS | 30.0% |
| !! | TATCGGCTTAAATATGTTGT+TGG | - | chr6.3:5296165-5296184 | None:intergenic | 30.0% |
| !! | TCAGTTTTATGTTGAGGTAA+TGG | + | chr6.3:5296427-5296446 | MS.gene20541:CDS | 30.0% |
| !! | TTGTTTCCTGAATGTTTTGA+TGG | - | chr6.3:5296075-5296094 | None:intergenic | 30.0% |
| !!! | AATCTACTGCTCTATTTTTG+TGG | + | chr6.3:5294359-5294378 | MS.gene20541:CDS | 30.0% |
| AAACGTCAACTGTAAACTGA+AGG | + | chr6.3:5294909-5294928 | MS.gene20541:CDS | 35.0% | |
| AAGAACAAAGAGAAAGAGAG+AGG | + | chr6.3:5296510-5296529 | MS.gene20541:CDS | 35.0% | |
| AAGAGATAGAATCAATCCTG+AGG | - | chr6.3:5296841-5296860 | None:intergenic | 35.0% | |
| AAGGTCGTAAATGTTCTTGT+AGG | - | chr6.3:5295772-5295791 | None:intergenic | 35.0% | |
| AAGTCAAGGCCATTAAATTG+TGG | - | chr6.3:5296599-5296618 | None:intergenic | 35.0% | |
| AATCGGGTAAATGATCTTTG+GGG | + | chr6.3:5296569-5296588 | MS.gene20541:CDS | 35.0% | |
| AATCTAAGTGACGTGACAAA+TGG | + | chr6.3:5294700-5294719 | MS.gene20541:CDS | 35.0% | |
| AATCTCAATCTCACTTAGAG+TGG | - | chr6.3:5296741-5296760 | None:intergenic | 35.0% | |
| AGAAAAACGAAGAAACTGCT+AGG | + | chr6.3:5295676-5295695 | MS.gene20541:CDS | 35.0% | |
| AGTGTGATTATATGTGCTCT+TGG | + | chr6.3:5295039-5295058 | MS.gene20541:CDS | 35.0% | |
| AGTTTACAGTTGACGTTTGA+AGG | - | chr6.3:5294907-5294926 | None:intergenic | 35.0% | |
| ATCTAAGTGACGTGACAAAT+GGG | + | chr6.3:5294701-5294720 | MS.gene20541:CDS | 35.0% | |
| ATCTCTTCTACATCACTTGA+TGG | + | chr6.3:5296854-5296873 | MS.gene20541:CDS | 35.0% | |
| CCAAACTTATTGAAGTTCCA+AGG | + | chr6.3:5295981-5296000 | MS.gene20541:CDS | 35.0% | |
| CCTTGGAACTTCAATAAGTT+TGG | - | chr6.3:5295984-5296003 | None:intergenic | 35.0% | |
| GAACAGTAAGTCTAAGAACA+AGG | + | chr6.3:5295401-5295420 | MS.gene20541:CDS | 35.0% | |
| GAATCGGGTAAATGATCTTT+GGG | + | chr6.3:5296568-5296587 | MS.gene20541:CDS | 35.0% | |
| GGTTGATCAAAAGAATGAAG+CGG | + | chr6.3:5295818-5295837 | MS.gene20541:CDS | 35.0% | |
| GTGAAGACCATAATTGTTTC+TGG | - | chr6.3:5294403-5294422 | None:intergenic | 35.0% | |
| TACGAAGTTCTTCATCACAT+TGG | - | chr6.3:5294797-5294816 | None:intergenic | 35.0% | |
| TATTCAAAGTAAGGCTTACG+AGG | + | chr6.3:5295122-5295141 | MS.gene20541:CDS | 35.0% | |
| TCAGATAGTTAAAGAAGGCA+TGG | + | chr6.3:5295338-5295357 | MS.gene20541:CDS | 35.0% | |
| TCATCTGCACAACCATATTA+TGG | + | chr6.3:5296379-5296398 | MS.gene20541:CDS | 35.0% | |
| TCGTAAGCCTTACTTTGAAT+AGG | - | chr6.3:5295123-5295142 | None:intergenic | 35.0% | |
| TCGTATTTAAGGACTTCAAG+CGG | + | chr6.3:5296810-5296829 | MS.gene20541:CDS | 35.0% | |
| TGAATCGGGTAAATGATCTT+TGG | + | chr6.3:5296567-5296586 | MS.gene20541:CDS | 35.0% | |
| TGAGATTGAGATTGTGAATC+TGG | + | chr6.3:5296748-5296767 | MS.gene20541:CDS | 35.0% | |
| TGCAGAACCTATTCAAAGTA+AGG | + | chr6.3:5295113-5295132 | MS.gene20541:CDS | 35.0% | |
| TGTGGCTTATTCTTTCAATG+AGG | + | chr6.3:5295512-5295531 | MS.gene20541:CDS | 35.0% | |
| TTATTCTTTCAATGAGGACG+AGG | + | chr6.3:5295518-5295537 | MS.gene20541:CDS | 35.0% | |
| TTTATACAACGTCTTCAGTC+TGG | - | chr6.3:5294248-5294267 | None:intergenic | 35.0% | |
| ! | AAGAGCACATATAATCACAC+TGG | - | chr6.3:5295040-5295059 | None:intergenic | 35.0% |
| ! | ACAATTTAATGGCCTTGACT+TGG | + | chr6.3:5296598-5296617 | MS.gene20541:CDS | 35.0% |
| ! | CAAGAATAGATGCCTTCTTT+TGG | - | chr6.3:5294453-5294472 | None:intergenic | 35.0% |
| ! | GATTCAGGTTCAATATCTGA+AGG | - | chr6.3:5297073-5297092 | None:intergenic | 35.0% |
| ! | TTTAAAGCCTGGAAACCAAT+TGG | + | chr6.3:5295179-5295198 | MS.gene20541:CDS | 35.0% |
| !! | AGGCTTTAAAGAACCAATGA+CGG | - | chr6.3:5295169-5295188 | None:intergenic | 35.0% |
| !! | ATCCAATTTTTCAGAGTGGA+GGG | + | chr6.3:5294956-5294975 | MS.gene20541:CDS | 35.0% |
| !! | CTCCAAAGCTTTAAAAGATG+TGG | + | chr6.3:5295494-5295513 | MS.gene20541:CDS | 35.0% |
| !! | CTTATATCTTTTGAAGGTGG+AGG | - | chr6.3:5294331-5294350 | None:intergenic | 35.0% |
| !! | TACCATCCAATTTTTCAGAG+TGG | + | chr6.3:5294952-5294971 | MS.gene20541:CDS | 35.0% |
| !! | TTATGTTGAGGTAATGGACA+TGG | + | chr6.3:5296433-5296452 | MS.gene20541:CDS | 35.0% |
| !!! | AGCCACATCTTTTAAAGCTT+TGG | - | chr6.3:5295499-5295518 | None:intergenic | 35.0% |
| AAATCAAAGGCTGATCACAG+TGG | + | chr6.3:5295555-5295574 | MS.gene20541:CDS | 40.0% | |
| AAGTATGGTACCTTTCCATG+TGG | + | chr6.3:5295860-5295879 | MS.gene20541:CDS | 40.0% | |
| ACTCTTGAGACACATGTGAA+TGG | + | chr6.3:5296245-5296264 | MS.gene20541:CDS | 40.0% | |
| AGACTTTGACTGAGTACGAA+TGG | - | chr6.3:5294581-5294600 | None:intergenic | 40.0% | |
| AGATTTCAAAAGAGGAGCTC+CGG | + | chr6.3:5295625-5295644 | MS.gene20541:CDS | 40.0% | |
| AGTTTCTGTTGTGGAAAAGG+AGG | + | chr6.3:5295221-5295240 | MS.gene20541:CDS | 40.0% | |
| ATGAAAACAGGACAGATCTC+TGG | + | chr6.3:5294275-5294294 | MS.gene20541:CDS | 40.0% | |
| ATTGCCTCCTGATTTACCAA+AGG | - | chr6.3:5297299-5297318 | None:intergenic | 40.0% | |
| CAAAGGTCAGGCAATCTTAT+CGG | - | chr6.3:5296182-5296201 | None:intergenic | 40.0% | |
| CGAGTTCCCAGAAACAATTA+TGG | + | chr6.3:5294393-5294412 | MS.gene20541:CDS | 40.0% | |
| CGTACTCAGTCAAAGTCTTA+TGG | + | chr6.3:5294583-5294602 | MS.gene20541:CDS | 40.0% | |
| CGTATTTAAGGACTTCAAGC+GGG | + | chr6.3:5296811-5296830 | MS.gene20541:CDS | 40.0% | |
| CTCTTGAGACACATGTGAAT+GGG | + | chr6.3:5296246-5296265 | MS.gene20541:CDS | 40.0% | |
| CTGCACAACCATATTATGGT+AGG | + | chr6.3:5296383-5296402 | MS.gene20541:CDS | 40.0% | |
| CTTGCCAATTAACGGAAGTA+TGG | + | chr6.3:5295845-5295864 | MS.gene20541:CDS | 40.0% | |
| CTTGTCTTTGTCGATGATGA+CGG | - | chr6.3:5295451-5295470 | None:intergenic | 40.0% | |
| GAGTCTCTATCAGTTCAACA+AGG | - | chr6.3:5296706-5296725 | None:intergenic | 40.0% | |
| GATCAACCTCTTAGAGAACT+TGG | + | chr6.3:5296626-5296645 | MS.gene20541:CDS | 40.0% | |
| GGAAGATAGGAAAAGAAGGA+AGG | + | chr6.3:5297264-5297283 | MS.gene20541:CDS | 40.0% | |
| GGTACCATACTTCCGTTAAT+TGG | - | chr6.3:5295852-5295871 | None:intergenic | 40.0% | |
| GTCAAGCCTAAAAATGACGA+TGG | + | chr6.3:5294526-5294545 | MS.gene20541:CDS | 40.0% | |
| GTGAGGAAGATAGGAAAAGA+AGG | + | chr6.3:5297260-5297279 | MS.gene20541:CDS | 40.0% | |
| GTTGATCAAACTCCAAGTCA+AGG | - | chr6.3:5296613-5296632 | None:intergenic | 40.0% | |
| TAAGTTTGGATCGTGAGAAC+TGG | - | chr6.3:5295970-5295989 | None:intergenic | 40.0% | |
| TAGGAAAAGAAGGAAGGCTA+AGG | + | chr6.3:5297270-5297289 | MS.gene20541:CDS | 40.0% | |
| TATCTTGTGCAGCCAAAAGA+AGG | + | chr6.3:5294438-5294457 | MS.gene20541:CDS | 40.0% | |
| TCAAGCAGGAAACCATTTCA+GGG | - | chr6.3:5295248-5295267 | None:intergenic | 40.0% | |
| TGAAAACAGGACAGATCTCT+GGG | + | chr6.3:5294276-5294295 | MS.gene20541:CDS | 40.0% | |
| TGAGATTGTGAATCTGGAGA+GGG | + | chr6.3:5296754-5296773 | MS.gene20541:CDS | 40.0% | |
| TGCAGTTTCTGTTGTGGAAA+AGG | + | chr6.3:5295218-5295237 | MS.gene20541:CDS | 40.0% | |
| TGCGATCCATCAAAACATTC+AGG | + | chr6.3:5296066-5296085 | MS.gene20541:CDS | 40.0% | |
| TGGGGACAACCACAATTTAA+TGG | + | chr6.3:5296587-5296606 | MS.gene20541:CDS | 40.0% | |
| TGTTCTTCTTCAAGCTCATC+AGG | - | chr6.3:5296497-5296516 | None:intergenic | 40.0% | |
| TTGAGATTGTGAATCTGGAG+AGG | + | chr6.3:5296753-5296772 | MS.gene20541:CDS | 40.0% | |
| ! | AAGATTTATGAGGTACCCCA+GGG | - | chr6.3:5296655-5296674 | None:intergenic | 40.0% |
| ! | AATTGTTATTGGTGTCCTGC+TGG | - | chr6.3:5295908-5295927 | None:intergenic | 40.0% |
| ! | CACCTTCAATGAAGCTTTGA+GGG | - | chr6.3:5296973-5296992 | None:intergenic | 40.0% |
| ! | CTCCACTCTGAAAAATTGGA+TGG | - | chr6.3:5294957-5294976 | None:intergenic | 40.0% |
| ! | CTGTGATCAGCCTTTGATTT+AGG | - | chr6.3:5295555-5295574 | None:intergenic | 40.0% |
| ! | TACATCACTTGATGGCATCA+AGG | + | chr6.3:5296862-5296881 | MS.gene20541:CDS | 40.0% |
| ! | TCATTTCATTTTCTGCTGGC+TGG | - | chr6.3:5296343-5296362 | None:intergenic | 40.0% |
| ! | TCTTCATCACATTGGTTGTG+AGG | - | chr6.3:5294789-5294808 | None:intergenic | 40.0% |
| ! | TGGTGTCTAAGACAACTCTA+AGG | + | chr6.3:5295589-5295608 | MS.gene20541:CDS | 40.0% |
| !! | CATCCAATTTTTCAGAGTGG+AGG | + | chr6.3:5294955-5294974 | MS.gene20541:CDS | 40.0% |
| !! | CTTTTGGCTGCACAAGATAT+GGG | - | chr6.3:5294437-5294456 | None:intergenic | 40.0% |
| !! | GTCATTGGTTCTTTAAAGCC+TGG | + | chr6.3:5295168-5295187 | MS.gene20541:CDS | 40.0% |
| !! | TCTTTTGGCTGCACAAGATA+TGG | - | chr6.3:5294438-5294457 | None:intergenic | 40.0% |
| !!! | GAAGCTCCATCGTCATTTTT+AGG | - | chr6.3:5294535-5294554 | None:intergenic | 40.0% |
| AAAGCAGGCTGAATCTGAAC+TGG | + | chr6.3:5296918-5296937 | MS.gene20541:CDS | 45.0% | |
| AACCAATTCTGCAGAAGACC+TGG | - | chr6.3:5295748-5295767 | None:intergenic | 45.0% | |
| AATCATCATCTCCCTAGGAG+GGG | - | chr6.3:5295796-5295815 | None:intergenic | 45.0% | |
| AATGGAAAAGCTAGTGCAGC+TGG | + | chr6.3:5294187-5294206 | MS.gene20541:CDS | 45.0% | |
| ACCTGAATCATCATCTCCCT+AGG | - | chr6.3:5295801-5295820 | None:intergenic | 45.0% | |
| ACTTATGTGCCGTGAATCCT+TGG | - | chr6.3:5296039-5296058 | None:intergenic | 45.0% | |
| AGCAATGCAGATAGGGAGAA+AGG | + | chr6.3:5297223-5297242 | MS.gene20541:CDS | 45.0% | |
| AGTCTGACAGTGAGGAAGAT+AGG | + | chr6.3:5297251-5297270 | MS.gene20541:CDS | 45.0% | |
| ATAGCTAGAGAGGAACCTGA+AGG | + | chr6.3:5294631-5294650 | MS.gene20541:CDS | 45.0% | |
| ATCAACACGCTCATCAGATC+TGG | - | chr6.3:5296288-5296307 | None:intergenic | 45.0% | |
| ATGGAAAAGCTAGTGCAGCT+GGG | + | chr6.3:5294188-5294207 | MS.gene20541:CDS | 45.0% | |
| ATGGACATGGTCCAGAATGT+TGG | + | chr6.3:5296446-5296465 | MS.gene20541:CDS | 45.0% | |
| ATTGTGAATCTGGAGAGGGT+TGG | + | chr6.3:5296758-5296777 | MS.gene20541:CDS | 45.0% | |
| CAAAGCTTCATTGAAGGTGG+TGG | + | chr6.3:5296974-5296993 | MS.gene20541:CDS | 45.0% | |
| CAAGATATGCAGCAGCCAAT+TGG | - | chr6.3:5295197-5295216 | None:intergenic | 45.0% | |
| CAAGCAGGAAACCATTTCAG+GGG | - | chr6.3:5295247-5295266 | None:intergenic | 45.0% | |
| CAGGAAACAAGTTGTAGCGA+GGG | + | chr6.3:5296085-5296104 | MS.gene20541:CDS | 45.0% | |
| CAGTTCGAATGAAAGCCACA+TGG | - | chr6.3:5295878-5295897 | None:intergenic | 45.0% | |
| CCACCTTCAATGAAGCTTTG+AGG | - | chr6.3:5296974-5296993 | None:intergenic | 45.0% | |
| CCTCAAAGCTTCATTGAAGG+TGG | + | chr6.3:5296971-5296990 | MS.gene20541:CDS | 45.0% | |
| CGAATGAAAGCCACATGGAA+AGG | - | chr6.3:5295873-5295892 | None:intergenic | 45.0% | |
| CGACAAAGACAAGACAGATG+TGG | + | chr6.3:5295458-5295477 | MS.gene20541:CDS | 45.0% | |
| CGATAAGATTGCCTGACCTT+TGG | + | chr6.3:5296180-5296199 | MS.gene20541:CDS | 45.0% | |
| CTTAGAGTGGCAACAAGGAA+AGG | - | chr6.3:5296728-5296747 | None:intergenic | 45.0% | |
| CTTGTGCACTTCCATTTCGA+TGG | - | chr6.3:5294162-5294181 | None:intergenic | 45.0% | |
| GAAAACAGGACAGATCTCTG+GGG | + | chr6.3:5294277-5294296 | MS.gene20541:CDS | 45.0% | |
| GAAAAGAAGGAAGGCTAAGG+CGG | + | chr6.3:5297273-5297292 | MS.gene20541:CDS | 45.0% | |
| GAATCATCATCTCCCTAGGA+GGG | - | chr6.3:5295797-5295816 | None:intergenic | 45.0% | |
| GACCCTCAAAGCTTCATTGA+AGG | + | chr6.3:5296968-5296987 | MS.gene20541:CDS | 45.0% | |
| GCAATGCAGATAGGGAGAAA+GGG | + | chr6.3:5297224-5297243 | MS.gene20541:CDS | 45.0% | |
| GCGGTTCTCTTGCCAATTAA+CGG | + | chr6.3:5295837-5295856 | MS.gene20541:CDS | 45.0% | |
| GGAGACTGAGAAAGTCATAC+TGG | + | chr6.3:5294879-5294898 | MS.gene20541:CDS | 45.0% | |
| GGATGCAAGCAATGCAGATA+GGG | + | chr6.3:5297216-5297235 | MS.gene20541:CDS | 45.0% | |
| GGCCTTGATTCTTCCATTGT+CGG | + | chr6.3:5294604-5294623 | MS.gene20541:CDS | 45.0% | |
| GGCTCAGAGGAATCTGATAA+AGG | + | chr6.3:5297040-5297059 | MS.gene20541:CDS | 45.0% | |
| GGTCATCTGTGATTGTCTTC+AGG | - | chr6.3:5296952-5296971 | None:intergenic | 45.0% | |
| GTCAAGCAGGAAACCATTTC+AGG | - | chr6.3:5295249-5295268 | None:intergenic | 45.0% | |
| GTCCGACAATGGAAGAATCA+AGG | - | chr6.3:5294609-5294628 | None:intergenic | 45.0% | |
| TAAGCAGTAGCATGCCAAAG+CGG | + | chr6.3:5297320-5297339 | MS.gene20541:CDS | 45.0% | |
| TCAACAAGGCAAGCTGAAGT+AGG | - | chr6.3:5296692-5296711 | None:intergenic | 45.0% | |
| TCAGGAAACAAGTTGTAGCG+AGG | + | chr6.3:5296084-5296103 | MS.gene20541:CDS | 45.0% | |
| TCCTAGGGAGATGATGATTC+AGG | + | chr6.3:5295797-5295816 | MS.gene20541:CDS | 45.0% | |
| TCCTCTTCAGAGTCTGATTC+AGG | - | chr6.3:5297088-5297107 | None:intergenic | 45.0% | |
| TCTAGCTATGTGTCCGACAA+TGG | - | chr6.3:5294620-5294639 | None:intergenic | 45.0% | |
| TCTCACTTAGAGTGGCAACA+AGG | - | chr6.3:5296733-5296752 | None:intergenic | 45.0% | |
| TCTTGCTGCAGTTTCTGTTG+TGG | + | chr6.3:5295212-5295231 | MS.gene20541:CDS | 45.0% | |
| TGAATCATCATCTCCCTAGG+AGG | - | chr6.3:5295798-5295817 | None:intergenic | 45.0% | |
| TGACGATGGAGCTTCTCTTA+TGG | + | chr6.3:5294540-5294559 | MS.gene20541:CDS | 45.0% | |
| TTAGAGAACTTGGCTTCCCT+GGG | + | chr6.3:5296636-5296655 | MS.gene20541:CDS | 45.0% | |
| TTATATGTGCTCTTGGAGCC+CGG | + | chr6.3:5295046-5295065 | MS.gene20541:CDS | 45.0% | |
| TTCCAGGTCTTCTGCAGAAT+TGG | + | chr6.3:5295743-5295762 | MS.gene20541:CDS | 45.0% | |
| TTGACTGAGTACGAATGGCA+CGG | - | chr6.3:5294576-5294595 | None:intergenic | 45.0% | |
| TTGAGCAGTAGCTCTTGTAC+CGG | - | chr6.3:5295068-5295087 | None:intergenic | 45.0% | |
| TTGGATCGTGAGAACTGGAA+GGG | - | chr6.3:5295965-5295984 | None:intergenic | 45.0% | |
| TTTCAATGAGGACGAGGAAG+AGG | + | chr6.3:5295524-5295543 | MS.gene20541:CDS | 45.0% | |
| TTTGATCTTAGGCGTAGTGC+TGG | + | chr6.3:5294982-5295001 | MS.gene20541:CDS | 45.0% | |
| TTTGGATCGTGAGAACTGGA+AGG | - | chr6.3:5295966-5295985 | None:intergenic | 45.0% | |
| ! | ACCTGAATCAGACTCTGAAG+AGG | + | chr6.3:5297084-5297103 | MS.gene20541:CDS | 45.0% |
| ! | ATGGCATTCAATGTGTCGCT+TGG | + | chr6.3:5295357-5295376 | MS.gene20541:CDS | 45.0% |
| ! | CACATTGGTTGTGAGGTATG+CGG | - | chr6.3:5294782-5294801 | None:intergenic | 45.0% |
| ! | CATCGAAATGGAAGTGCACA+AGG | + | chr6.3:5294160-5294179 | MS.gene20541:CDS | 45.0% |
| ! | CTCCCTCCACTCTGAAAAAT+TGG | - | chr6.3:5294961-5294980 | None:intergenic | 45.0% |
| ! | GAAGATTTATGAGGTACCCC+AGG | - | chr6.3:5296656-5296675 | None:intergenic | 45.0% |
| ! | GGTATTGAGTTTCGAGAGTC+TGG | + | chr6.3:5295291-5295310 | MS.gene20541:CDS | 45.0% |
| ! | TATCTTAACTTGGGCCGCTT+TGG | - | chr6.3:5297337-5297356 | None:intergenic | 45.0% |
| ! | TGAATCAGACTCTGAAGAGG+AGG | + | chr6.3:5297087-5297106 | MS.gene20541:CDS | 45.0% |
| !! | AGCTACTGATTCAGAATCCG+AGG | + | chr6.3:5297018-5297037 | MS.gene20541:CDS | 45.0% |
| !! | CAATTTTTCAGAGTGGAGGG+AGG | + | chr6.3:5294959-5294978 | MS.gene20541:CDS | 45.0% |
| !! | GCTACTGATTCAGAATCCGA+GGG | + | chr6.3:5297019-5297038 | MS.gene20541:CDS | 45.0% |
| !!! | AGCTGCACTAGCTTTTCCAT+TGG | - | chr6.3:5294188-5294207 | None:intergenic | 45.0% |
| !!! | GCTCTATTTTTGTGGCTGCT+TGG | + | chr6.3:5294367-5294386 | MS.gene20541:CDS | 45.0% |
| AAAAGCTAGTGCAGCTGGGT+CGG | + | chr6.3:5294192-5294211 | MS.gene20541:CDS | 50.0% | |
| AACACGCTCATCAGATCTGG+TGG | - | chr6.3:5296285-5296304 | None:intergenic | 50.0% | |
| AAGAACCAATGACGGCCTCA+TGG | - | chr6.3:5295161-5295180 | None:intergenic | 50.0% | |
| AAGGCGGCCTTTGGTAAATC+AGG | + | chr6.3:5297289-5297308 | MS.gene20541:CDS | 50.0% | |
| AATCTGGAGAGGGTTGGACT+TGG | + | chr6.3:5296764-5296783 | MS.gene20541:CDS | 50.0% | |
| AGAACCAATGACGGCCTCAT+GGG | - | chr6.3:5295160-5295179 | None:intergenic | 50.0% | |
| AGACATGGGAAGAACTGGAG+AGG | + | chr6.3:5297194-5297213 | MS.gene20541:CDS | 50.0% | |
| AGACTCTCAGGAGGATTTGG+AGG | + | chr6.3:5297159-5297178 | MS.gene20541:CDS | 50.0% | |
| AGGAAGAGCAGGGAAAGACA+TGG | + | chr6.3:5297179-5297198 | MS.gene20541:CDS | 50.0% | |
| ATCAGATTCCTCTGAGCCCT+CGG | - | chr6.3:5297038-5297057 | None:intergenic | 50.0% | |
| ATCATCATCTCCCTAGGAGG+GGG | - | chr6.3:5295795-5295814 | None:intergenic | 50.0% | |
| ATCTGGAGAGGGTTGGACTT+GGG | + | chr6.3:5296765-5296784 | MS.gene20541:CDS | 50.0% | |
| ATGGTCCAGAATGTTGGAGC+TGG | + | chr6.3:5296452-5296471 | MS.gene20541:CDS | 50.0% | |
| CAAAAAGCCTGCCAGAGAGT+CGG | + | chr6.3:5294480-5294499 | MS.gene20541:CDS | 50.0% | |
| CAGAAGACCTGGAAGAGGAA+CGG | - | chr6.3:5295737-5295756 | None:intergenic | 50.0% | |
| CATTCCGCTCCAAGGATTCA+CGG | + | chr6.3:5296027-5296046 | MS.gene20541:CDS | 50.0% | |
| CCTGCTTGACAAAGTCTGCT+GGG | + | chr6.3:5295259-5295278 | MS.gene20541:CDS | 50.0% | |
| CTTAGAGAACTTGGCTTCCC+TGG | + | chr6.3:5296635-5296654 | MS.gene20541:CDS | 50.0% | |
| GACATGGGAAGAACTGGAGA+GGG | + | chr6.3:5297195-5297214 | MS.gene20541:CDS | 50.0% | |
| GAGAGCTGAGAGAGCTACTT+TGG | + | chr6.3:5296115-5296134 | MS.gene20541:CDS | 50.0% | |
| GAGGATTTGGAGGAAGAGCA+GGG | + | chr6.3:5297169-5297188 | MS.gene20541:CDS | 50.0% | |
| GAGGTATGCGGCTCTCTTAA+TGG | - | chr6.3:5294770-5294789 | None:intergenic | 50.0% | |
| GGAAGACTCTCAGGAGGATT+TGG | + | chr6.3:5297156-5297175 | MS.gene20541:CDS | 50.0% | |
| GGAAGAGCAGGGAAAGACAT+GGG | + | chr6.3:5297180-5297199 | MS.gene20541:CDS | 50.0% | |
| GGATTCACGGCACATAAGTG+AGG | + | chr6.3:5296040-5296059 | MS.gene20541:CDS | 50.0% | |
| GGGAAAGACATGGGAAGAAC+TGG | + | chr6.3:5297189-5297208 | MS.gene20541:CDS | 50.0% | |
| GGGAAGCCAAGTTCTCTAAG+AGG | - | chr6.3:5296635-5296654 | None:intergenic | 50.0% | |
| GGGATGCAAGCAATGCAGAT+AGG | + | chr6.3:5297215-5297234 | MS.gene20541:CDS | 50.0% | |
| GGTTCTTCTCAAAGCCCATG+AGG | + | chr6.3:5295143-5295162 | MS.gene20541:CDS | 50.0% | |
| GTGGAGGGAGGTTTGATCTT+AGG | + | chr6.3:5294971-5294990 | MS.gene20541:CDS | 50.0% | |
| TAGAGAACTTGGCTTCCCTG+GGG | + | chr6.3:5296637-5296656 | MS.gene20541:CDS | 50.0% | |
| TCACAGTGGTACAGAGCTCT+TGG | + | chr6.3:5295569-5295588 | MS.gene20541:CDS | 50.0% | |
| TCCTGCTTGACAAAGTCTGC+TGG | + | chr6.3:5295258-5295277 | MS.gene20541:CDS | 50.0% | |
| TCTTCCCAGCTCCAACATTC+TGG | - | chr6.3:5296460-5296479 | None:intergenic | 50.0% | |
| TGAGCAGTAGCTCTTGTACC+GGG | - | chr6.3:5295067-5295086 | None:intergenic | 50.0% | |
| TGGACGTGGAAGGAAGATAC+CGG | + | chr6.3:5296220-5296239 | MS.gene20541:CDS | 50.0% | |
| TGGATCGTGAGAACTGGAAG+GGG | - | chr6.3:5295964-5295983 | None:intergenic | 50.0% | |
| TGGTCCAGAATGTTGGAGCT+GGG | + | chr6.3:5296453-5296472 | MS.gene20541:CDS | 50.0% | |
| TGTCGGACACATAGCTAGAG+AGG | + | chr6.3:5294621-5294640 | MS.gene20541:CDS | 50.0% | |
| TTCCACGTCCACCTAAACCA+GGG | - | chr6.3:5296211-5296230 | None:intergenic | 50.0% | |
| TTCTGCAGAAGACCTGGAAG+AGG | - | chr6.3:5295742-5295761 | None:intergenic | 50.0% | |
| TTGACAAAGTCTGCTGGGAC+AGG | + | chr6.3:5295264-5295283 | MS.gene20541:CDS | 50.0% | |
| ! | ATCACTTGTTGAGTCCGAGG+AGG | + | chr6.3:5297123-5297142 | MS.gene20541:CDS | 50.0% |
| ! | CACTTGATGGCATCAAGGAG+TGG | + | chr6.3:5296867-5296886 | MS.gene20541:CDS | 50.0% |
| ! | CTTCATTGAAGGTGGTGGCT+GGG | + | chr6.3:5296979-5296998 | MS.gene20541:CDS | 50.0% |
| ! | GAGAGCTACTTTGGTTACCC+AGG | + | chr6.3:5296124-5296143 | MS.gene20541:CDS | 50.0% |
| ! | GGTTGTGCAGATGAAAGTGC+AGG | - | chr6.3:5296373-5296392 | None:intergenic | 50.0% |
| ! | GTGCAGATGAAAGTGCAGGA+GGG | - | chr6.3:5296369-5296388 | None:intergenic | 50.0% |
| ! | TGCATCACTTGTTGAGTCCG+AGG | + | chr6.3:5297120-5297139 | MS.gene20541:CDS | 50.0% |
| ! | TGTGCAGATGAAAGTGCAGG+AGG | - | chr6.3:5296370-5296389 | None:intergenic | 50.0% |
| !! | ACATGTGTCTCAAGAGTGCC+CGG | - | chr6.3:5296242-5296261 | None:intergenic | 50.0% |
| AAAGCCCATGAGGCCGTCAT+TGG | + | chr6.3:5295153-5295172 | MS.gene20541:CDS | 55.0% | |
| AAGTCTGCTGGGACAGGCAT+TGG | + | chr6.3:5295270-5295289 | MS.gene20541:CDS | 55.0% | |
| ACTTCAAGCGGGATGTCCTC+AGG | + | chr6.3:5296822-5296841 | MS.gene20541:CDS | 55.0% | |
| AGGGAACGAGTCTGACAGTG+AGG | + | chr6.3:5297243-5297262 | MS.gene20541:CDS | 55.0% | |
| CCCAGCAGACTTTGTCAAGC+AGG | - | chr6.3:5295262-5295281 | None:intergenic | 55.0% | |
| CTAAACCAGGGCGGATCCAA+AGG | - | chr6.3:5296199-5296218 | None:intergenic | 55.0% | |
| CTGGTTTAGGTGGACGTGGA+AGG | + | chr6.3:5296210-5296229 | MS.gene20541:CDS | 55.0% | |
| CTTCCACGTCCACCTAAACC+AGG | - | chr6.3:5296212-5296231 | None:intergenic | 55.0% | |
| CTTTGGATCCGCCCTGGTTT+AGG | + | chr6.3:5296197-5296216 | MS.gene20541:CDS | 55.0% | |
| GAAACTGCTAGGCGACTTGC+TGG | + | chr6.3:5295687-5295706 | MS.gene20541:CDS | 55.0% | |
| GAGACAACCGTTCCTCTTCC+AGG | + | chr6.3:5295727-5295746 | MS.gene20541:CDS | 55.0% | |
| GCGGCCTTTGGTAAATCAGG+AGG | + | chr6.3:5297292-5297311 | MS.gene20541:CDS | 55.0% | |
| GGAAAAGGAGGCCCCTGAAA+TGG | + | chr6.3:5295233-5295252 | MS.gene20541:CDS | 55.0% | |
| GGAAGCTTCATTCCGCTCCA+AGG | + | chr6.3:5296019-5296038 | MS.gene20541:CDS | 55.0% | |
| GGACGTGGAAGGAAGATACC+GGG | + | chr6.3:5296221-5296240 | MS.gene20541:CDS | 55.0% | |
| GGAGGATTTGGAGGAAGAGC+AGG | + | chr6.3:5297168-5297187 | MS.gene20541:CDS | 55.0% | |
| GGCAAGCTGCAGTTTCTCCT+GGG | - | chr6.3:5296144-5296163 | None:intergenic | 55.0% | |
| GTTCTGCCTGATGCTGTCTC+CGG | - | chr6.3:5295647-5295666 | None:intergenic | 55.0% | |
| TCGAACTGTTTCCAGCCAGC+AGG | + | chr6.3:5295890-5295909 | MS.gene20541:CDS | 55.0% | |
| TGGCAAGCTGCAGTTTCTCC+TGG | - | chr6.3:5296145-5296164 | None:intergenic | 55.0% | |
| TGTGCCGTGAATCCTTGGAG+CGG | - | chr6.3:5296034-5296053 | None:intergenic | 55.0% | |
| TTACGACCTTCCCCCTCCTA+GGG | + | chr6.3:5295782-5295801 | MS.gene20541:CDS | 55.0% | |
| TTCAGAATCCGAGGGCTCAG+AGG | + | chr6.3:5297027-5297046 | MS.gene20541:CDS | 55.0% | |
| TTTACGACCTTCCCCCTCCT+AGG | + | chr6.3:5295781-5295800 | MS.gene20541:CDS | 55.0% | |
| ! | GCAGCAGCCAATTGGTTTCC+AGG | - | chr6.3:5295189-5295208 | None:intergenic | 55.0% |
| ! | GCTTCATTGAAGGTGGTGGC+TGG | + | chr6.3:5296978-5296997 | MS.gene20541:CDS | 55.0% |
| ! | GTTATTGGTGTCCTGCTGGC+TGG | - | chr6.3:5295904-5295923 | None:intergenic | 55.0% |
| AAGCCTGCCAGAGAGTCGGT+TGG | + | chr6.3:5294484-5294503 | MS.gene20541:CDS | 60.0% | |
| AGGAAGGCTAAGGCGGCCTT+TGG | + | chr6.3:5297280-5297299 | MS.gene20541:CDS | 60.0% | |
| CACGTCCACCTAAACCAGGG+CGG | - | chr6.3:5296208-5296227 | None:intergenic | 60.0% | |
| CGAGGAGGAGGAAGACTCTC+AGG | + | chr6.3:5297147-5297166 | MS.gene20541:CDS | 60.0% | |
| GGAGGAGGAAGACTCTCAGG+AGG | + | chr6.3:5297150-5297169 | MS.gene20541:CDS | 60.0% | |
| TCATCTCCCTAGGAGGGGGA+AGG | - | chr6.3:5295791-5295810 | None:intergenic | 60.0% | |
| TGAGAACTGGAAGGGGTCCC+AGG | - | chr6.3:5295957-5295976 | None:intergenic | 60.0% | |
| TGGATCCGCCCTGGTTTAGG+TGG | + | chr6.3:5296200-5296219 | MS.gene20541:CDS | 60.0% | |
| TGTTGAGTCCGAGGAGGACG+AGG | + | chr6.3:5297129-5297148 | MS.gene20541:CDS | 60.0% | |
| TTCCTCCTCCTCGTCCTCCT+CGG | - | chr6.3:5297140-5297159 | None:intergenic | 60.0% | |
| ! | ACACCAACCGACTCTCTGGC+AGG | - | chr6.3:5294490-5294509 | None:intergenic | 60.0% |
| ! | CTCCACACCAACCGACTCTC+TGG | - | chr6.3:5294494-5294513 | None:intergenic | 60.0% |
| ! | GGAAGTGCACAAGGCGCCAA+TGG | + | chr6.3:5294169-5294188 | MS.gene20541:CDS | 60.0% |
| ! | TGCCAGAGAGTCGGTTGGTG+TGG | + | chr6.3:5294489-5294508 | MS.gene20541:CDS | 60.0% |
| !! | ACTGCTAGGCGACTTGCTGG+TGG | + | chr6.3:5295690-5295709 | MS.gene20541:CDS | 60.0% |
| !! | TAGTGCTGGCAGCAACGACG+AGG | + | chr6.3:5294996-5295015 | MS.gene20541:CDS | 60.0% |
| CCAGGGCGGATCCAAAGGTC+AGG | - | chr6.3:5296194-5296213 | None:intergenic | 65.0% | |
| CCTGACCTTTGGATCCGCCC+TGG | + | chr6.3:5296191-5296210 | MS.gene20541:CDS | 65.0% | |
| CGCCCTGGTTTAGGTGGACG+TGG | + | chr6.3:5296206-5296225 | MS.gene20541:CDS | 65.0% | |
| GGAGCTCCGGAGACAGCATC+AGG | + | chr6.3:5295638-5295657 | MS.gene20541:CDS | 65.0% | |
| TGAGTCCGAGGAGGACGAGG+AGG | + | chr6.3:5297132-5297151 | MS.gene20541:CDS | 65.0% | |
| !! | GCTAGGCGACTTGCTGGTGG+TGG | + | chr6.3:5295693-5295712 | MS.gene20541:CDS | 65.0% |
| GTCCGAGGAGGACGAGGAGG+AGG | + | chr6.3:5297135-5297154 | MS.gene20541:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 5294151 | 5297357 | 5294151 | ID=MS.gene20541 |
| chr6.3 | mRNA | 5294151 | 5297357 | 5294151 | ID=MS.gene20541.t1;Parent=MS.gene20541 |
| chr6.3 | exon | 5294151 | 5297357 | 5294151 | ID=MS.gene20541.t1.exon1;Parent=MS.gene20541.t1 |
| chr6.3 | CDS | 5294151 | 5297357 | 5294151 | ID=cds.MS.gene20541.t1;Parent=MS.gene20541.t1 |
| Gene Sequence |
| Protein sequence |
