Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63953.t1 | XP_013442450.1 | 95.2 | 917 | 35 | 4 | 1 | 913 | 1 | 912 | 0.00E+00 | 1396.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63953.t1 | Q9FJ79 | 73.8 | 564 | 147 | 1 | 350 | 913 | 349 | 911 | 1.2e-246 | 854.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63953.t1 | A0A072TSF3 | 95.2 | 917 | 35 | 4 | 1 | 913 | 1 | 912 | 0.0e+00 | 1396.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63953.t1 | MTR_0172s0010 | 96.838 | 917 | 20 | 4 | 1 | 913 | 1 | 912 | 0.0 | 1788 |
| MS.gene63953.t1 | MTR_1g040355 | 63.485 | 964 | 222 | 16 | 13 | 913 | 3 | 899 | 0.0 | 1104 |
| MS.gene63953.t1 | MTR_3g114350 | 61.899 | 895 | 248 | 15 | 19 | 898 | 7 | 823 | 0.0 | 980 |
| MS.gene63953.t1 | MTR_3g114260 | 59.775 | 890 | 233 | 19 | 19 | 892 | 7 | 787 | 0.0 | 895 |
| MS.gene63953.t1 | MTR_3g114150 | 59.608 | 817 | 238 | 14 | 24 | 835 | 15 | 744 | 0.0 | 832 |
| MS.gene63953.t1 | MTR_3g114360 | 57.364 | 129 | 19 | 2 | 763 | 891 | 64 | 156 | 2.88e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63953.t1 | AT5G55300 | 61.511 | 847 | 271 | 11 | 90 | 913 | 99 | 913 | 0.0 | 924 |
| MS.gene63953.t1 | AT5G55300 | 61.493 | 844 | 270 | 11 | 90 | 910 | 99 | 910 | 0.0 | 915 |
| MS.gene63953.t1 | AT5G55310 | 77.413 | 549 | 124 | 0 | 365 | 913 | 363 | 911 | 0.0 | 898 |
| MS.gene63953.t1 | AT5G55300 | 73.585 | 265 | 70 | 0 | 649 | 913 | 297 | 561 | 1.87e-130 | 404 |
| MS.gene63953.t1 | AT4G26701 | 85.294 | 68 | 10 | 0 | 846 | 913 | 2 | 69 | 5.01e-35 | 127 |
Find 183 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATAACTTTGAATTAAT+TGG | 0.072075 | 4.1:+56263451 | None:intergenic |
| GTTATTCAAGTATGTGTTTC+TGG | 0.153059 | 4.1:-56263437 | MS.gene63953:CDS |
| ATAAGTTCAAGGAGAATTTC+TGG | 0.178602 | 4.1:-56265609 | MS.gene63953:CDS |
| GATGGTTTATCGGTTAATTT+TGG | 0.202557 | 4.1:+56266128 | None:intergenic |
| TTATCGGATGTTCCTGAATT+AGG | 0.239627 | 4.1:+56266542 | None:intergenic |
| TTCTGTCAAGTGTGAGATTA+AGG | 0.259606 | 4.1:-56266342 | MS.gene63953:CDS |
| GTTTCATTCTTCACATTAAC+AGG | 0.270696 | 4.1:+56266758 | None:intergenic |
| TTTCCATCTGAACTCTTTGT+AGG | 0.278438 | 4.1:+56261305 | None:intergenic |
| CTCTGTCAAGTGTGAGATTA+AGG | 0.281460 | 4.1:-56266213 | MS.gene63953:CDS |
| CTTGTCACTTTGACCCTTCA+AGG | 0.285277 | 4.1:+56263402 | None:intergenic |
| TGATTGTTTAGACTTGTTCT+TGG | 0.301245 | 4.1:+56266004 | None:intergenic |
| TACTTATCTTATTGATAAAC+TGG | 0.307945 | 4.1:-56263155 | MS.gene63953:CDS |
| CAGTTACATGGTTATGCTAT+TGG | 0.320588 | 4.1:-56263480 | MS.gene63953:CDS |
| TGGGCAATGGCTTAGAAGTT+TGG | 0.321229 | 4.1:+56266843 | None:intergenic |
| CCATCAAATTCGTCTTCATT+AGG | 0.323404 | 4.1:-56266794 | MS.gene63953:CDS |
| AGTGACATCACAATTAATAT+TGG | 0.327721 | 4.1:-56263694 | MS.gene63953:CDS |
| TTCAATACCATCAATTTGTT+GGG | 0.330947 | 4.1:+56262685 | None:intergenic |
| CCTAATGAAGACGAATTTGA+TGG | 0.333059 | 4.1:+56266794 | None:intergenic |
| TTCTTCACATTAACAGGCTT+TGG | 0.341804 | 4.1:+56266764 | None:intergenic |
| TTCAAAATTGCATTATAAAC+AGG | 0.344040 | 4.1:+56262440 | None:intergenic |
| GAAGGAGCTGAAAGTAGATT+TGG | 0.354023 | 4.1:-56261351 | MS.gene63953:CDS |
| CCTTTACTAGAGTGTTCAAT+AGG | 0.355769 | 4.1:+56266731 | None:intergenic |
| CTCTGCTGGCAAAATTTGCT+TGG | 0.357444 | 4.1:-56260709 | MS.gene63953:CDS |
| GCTCTTGGTCTGTTTGCTCT+TGG | 0.361937 | 4.1:+56266034 | None:intergenic |
| GAAGATTTCTTGATAACAAC+AGG | 0.364663 | 4.1:+56266620 | None:intergenic |
| CTTTCGTACCAGTCATAGAT+TGG | 0.365513 | 4.1:+56265520 | None:intergenic |
| AATTCCTGCACAAGGTTTCA+TGG | 0.365690 | 4.1:+56266823 | None:intergenic |
| CTTAGTGGAAGATGGTTTAT+CGG | 0.366342 | 4.1:+56266118 | None:intergenic |
| TGAATAACTTTGAATTAATT+GGG | 0.366762 | 4.1:+56263452 | None:intergenic |
| CTTCTTGAATCTGTGGGAAA+TGG | 0.367615 | 4.1:+56266154 | None:intergenic |
| TCACCAGGAATAGGACATTC+AGG | 0.368279 | 4.1:+56263655 | None:intergenic |
| GTTCTTGGTCTGTTTGCTCT+TGG | 0.372481 | 4.1:+56266019 | None:intergenic |
| GGCAGCTAGTAGTTCCTTGA+AGG | 0.377602 | 4.1:-56263416 | MS.gene63953:CDS |
| CTTCAATACCATCAATTTGT+TGG | 0.382588 | 4.1:+56262684 | None:intergenic |
| TGAGAAAATTGACGAACTTC+AGG | 0.383294 | 4.1:-56261512 | MS.gene63953:intron |
| AGAAAGCTAAATTACGCTTC+AGG | 0.383984 | 4.1:+56261263 | None:intergenic |
| AGGAAGAAGCGTTGAAGATC+TGG | 0.386090 | 4.1:+56265962 | None:intergenic |
| TTCCATCTGAACTCTTTGTA+GGG | 0.389057 | 4.1:+56261306 | None:intergenic |
| GGGGTCGAGGTAGTTTATCT+TGG | 0.389966 | 4.1:+56261008 | None:intergenic |
| TTAATGCAGTTTAACTTCCT+TGG | 0.394312 | 4.1:-56262506 | MS.gene63953:intron |
| GCACCAGGCAACTGTAATCC+TGG | 0.401076 | 4.1:+56260987 | None:intergenic |
| AGGATTATATAGAGAACATC+AGG | 0.401962 | 4.1:-56263237 | MS.gene63953:CDS |
| TTCTTACGGAAACCTAATTC+AGG | 0.404517 | 4.1:-56266554 | MS.gene63953:CDS |
| GGAATAGGACATTCAGGAAT+TGG | 0.414990 | 4.1:+56263661 | None:intergenic |
| CCAGCTGAATCTGAGACCTT+TGG | 0.416681 | 4.1:+56266257 | None:intergenic |
| ATTCCTGAATGTCCTATTCC+TGG | 0.417771 | 4.1:-56263658 | MS.gene63953:CDS |
| TGCTCGGGAGTCAAATCAAC+AGG | 0.418511 | 4.1:+56265834 | None:intergenic |
| TAATACCATTCACCAGGAAT+AGG | 0.420224 | 4.1:+56263646 | None:intergenic |
| GTTCAGAAAGAGCGGCAAAA+TGG | 0.420953 | 4.1:-56266503 | MS.gene63953:CDS |
| ATCTTCCACTTGGAACTCAA+TGG | 0.428508 | 4.1:+56266674 | None:intergenic |
| TGAAAATCTCTTTGATATGC+TGG | 0.430010 | 4.1:-56262318 | MS.gene63953:CDS |
| AATATCTTCTTAGTGGAAGA+TGG | 0.431445 | 4.1:+56266110 | None:intergenic |
| CTTTGTCAGCAAAGTTCTTA+CGG | 0.431492 | 4.1:-56266568 | MS.gene63953:CDS |
| ATCTATCACATTAGATGATA+AGG | 0.436651 | 4.1:-56262219 | MS.gene63953:intron |
| TTTCGTACCAGTCATAGATT+GGG | 0.437199 | 4.1:+56265521 | None:intergenic |
| TTGTGATTCCGTGCACTCTT+CGG | 0.438977 | 4.1:-56266417 | MS.gene63953:CDS |
| ACTTCCCATTTCCCACTCTT+CGG | 0.439433 | 4.1:-56266288 | MS.gene63953:CDS |
| TTTACTCCATGGGGCTGGTA+AGG | 0.446824 | 4.1:+56265876 | None:intergenic |
| CCACGGCCACGGAACAATCC+TGG | 0.447672 | 4.1:+56263888 | None:intergenic |
| ACTGACGTGCCTTCTTCAAA+TGG | 0.449317 | 4.1:-56266866 | MS.gene63953:CDS |
| GTTACTAAAGTGAATAAGTC+TGG | 0.449377 | 4.1:-56266080 | MS.gene63953:CDS |
| TTCTTGAATCTGTGGGAAAT+GGG | 0.450021 | 4.1:+56266155 | None:intergenic |
| CCAGGATTGTTCCGTGGCCG+TGG | 0.452534 | 4.1:-56263888 | MS.gene63953:CDS |
| CTTAACCGAAGAGTGGGAAA+TGG | 0.453875 | 4.1:+56266283 | None:intergenic |
| GGCAAAATTTGCTTGGGCAA+TGG | 0.454870 | 4.1:-56260702 | MS.gene63953:CDS |
| TCTGCTGGCAAAATTTGCTT+GGG | 0.456594 | 4.1:-56260708 | MS.gene63953:CDS |
| TCAACGCTTCTTCCTAGCTC+TGG | 0.457193 | 4.1:-56265954 | MS.gene63953:CDS |
| AGCTGAAAGTAGATTTGGAC+AGG | 0.459663 | 4.1:-56261346 | MS.gene63953:CDS |
| TTGCTGTTTACTACTAGTGC+TGG | 0.461451 | 4.1:+56266478 | None:intergenic |
| AGATCTCAGAATCTAAAGTC+AGG | 0.468330 | 4.1:+56260671 | None:intergenic |
| ATATCGCACCTCCTCTTGCT+CGG | 0.471491 | 4.1:+56265818 | None:intergenic |
| GATCTTAAAACTGTAGCATT+GGG | 0.472041 | 4.1:-56261036 | MS.gene63953:CDS |
| TTAACCGAAGAGTGGGAAAT+GGG | 0.473504 | 4.1:+56266284 | None:intergenic |
| AGATCTTAAAACTGTAGCAT+TGG | 0.479247 | 4.1:-56261037 | MS.gene63953:CDS |
| AGGAGAATTTCTGGAATGAC+TGG | 0.482787 | 4.1:-56265600 | MS.gene63953:CDS |
| ATTTGCTTGGGCAATGGACG+TGG | 0.483791 | 4.1:-56260696 | MS.gene63953:CDS |
| AAGAACAAGTCTAAACAATC+AGG | 0.484878 | 4.1:-56266002 | MS.gene63953:CDS |
| CACCAGGCAACTGTAATCCT+GGG | 0.485525 | 4.1:+56260988 | None:intergenic |
| TTCTTCCTAGCTCTGGTGAT+GGG | 0.489343 | 4.1:-56265947 | MS.gene63953:CDS |
| AGTCATGGAGGACAGTCAAA+TGG | 0.490892 | 4.1:-56266896 | MS.gene63953:CDS |
| CGAGAAGGCTAGGTTGTTGA+AGG | 0.494737 | 4.1:-56263371 | MS.gene63953:intron |
| CTTCTTCCTAGCTCTGGTGA+TGG | 0.496550 | 4.1:-56265948 | MS.gene63953:CDS |
| TGTGTGACAACAGTTGAATA+AGG | 0.499334 | 4.1:-56261748 | MS.gene63953:intron |
| GAAGTTTGGCCATTTGAAGA+AGG | 0.499457 | 4.1:+56266857 | None:intergenic |
| CCATGGGGCTGGTAAGGAGG+AGG | 0.500595 | 4.1:+56265882 | None:intergenic |
| GTAAGAACTTTGCTGACAAA+GGG | 0.500785 | 4.1:+56266570 | None:intergenic |
| CCTCCTCCTTACCAGCCCCA+TGG | 0.506163 | 4.1:-56265882 | MS.gene63953:CDS |
| TTATAATCATGCAAATAAAG+AGG | 0.507052 | 4.1:-56261688 | MS.gene63953:intron |
| AACCTCATGCCTCTTGCACC+AGG | 0.508189 | 4.1:+56260972 | None:intergenic |
| CGTAAGAACTTTGCTGACAA+AGG | 0.509001 | 4.1:+56266569 | None:intergenic |
| AGAAAATGCAACGTGATATG+AGG | 0.510071 | 4.1:-56261068 | MS.gene63953:CDS |
| CCTATTGAACACTCTAGTAA+AGG | 0.512843 | 4.1:-56266731 | MS.gene63953:CDS |
| GGTTAAGAAGTCAAAGGTCT+CGG | 0.513126 | 4.1:-56266396 | MS.gene63953:CDS |
| AATTTCAGAGTTGAACCTCC+AGG | 0.516813 | 4.1:-56263906 | MS.gene63953:CDS |
| CATGCAGAAAGATAAGTTCA+AGG | 0.516917 | 4.1:-56265620 | MS.gene63953:CDS |
| GATGTTCACCAAATCTCTGC+TGG | 0.517153 | 4.1:-56260723 | MS.gene63953:CDS |
| TCCATCTGAACTCTTTGTAG+GGG | 0.518895 | 4.1:+56261307 | None:intergenic |
| GCATGAGGTTCCCATTGAAA+AGG | 0.521317 | 4.1:-56260959 | MS.gene63953:intron |
| CATCTGAAGGAACTCATGCC+CGG | 0.522611 | 4.1:-56262275 | MS.gene63953:CDS |
| TAAACAATCAGGCAGAGATT+CGG | 0.523127 | 4.1:-56265991 | MS.gene63953:CDS |
| ACCCCAGGATTACAGTTGCC+TGG | 0.525952 | 4.1:-56260990 | MS.gene63953:CDS |
| CAAGAAATCTTCTCAAGACT+CGG | 0.526467 | 4.1:-56266609 | MS.gene63953:CDS |
| TGGTGACTTCTTGAATCTGT+GGG | 0.526676 | 4.1:+56266148 | None:intergenic |
| TATCGCACCTCCTCTTGCTC+GGG | 0.527349 | 4.1:+56265819 | None:intergenic |
| GCACAAGGTTTCATGGGCAA+TGG | 0.531380 | 4.1:+56266830 | None:intergenic |
| ACTCCATGGGGCTGGTAAGG+AGG | 0.532037 | 4.1:+56265879 | None:intergenic |
| CCATCTGAACTCTTTGTAGG+GGG | 0.532369 | 4.1:+56261308 | None:intergenic |
| AATGACTGGCGAGAGGTGCT+AGG | 0.532905 | 4.1:-56265586 | MS.gene63953:CDS |
| GATAAACTGGCTCTGAGAGC+TGG | 0.532912 | 4.1:-56263142 | MS.gene63953:CDS |
| AATGTCCTATTCCTGGTGAA+TGG | 0.535103 | 4.1:-56263651 | MS.gene63953:intron |
| AAGTAGATTTGGACAGGGCA+AGG | 0.536470 | 4.1:-56261340 | MS.gene63953:CDS |
| ATTCCTGCACAAGGTTTCAT+GGG | 0.540239 | 4.1:+56266824 | None:intergenic |
| TGGGATGCTCTCCACGGCCA+CGG | 0.540481 | 4.1:+56263877 | None:intergenic |
| ATATTAATTGTGATGTCACT+TGG | 0.542426 | 4.1:+56263697 | None:intergenic |
| TGACTGGTACGAAAGTGAAA+AGG | 0.543014 | 4.1:-56265512 | MS.gene63953:CDS |
| TTGGTGACTTCTTGAATCTG+TGG | 0.547798 | 4.1:+56266147 | None:intergenic |
| TTGAATAAGGACACTAAAGA+TGG | 0.549630 | 4.1:-56261735 | MS.gene63953:CDS |
| CAAGTGTGAGATTAAGGCTA+AGG | 0.549631 | 4.1:-56266207 | MS.gene63953:CDS |
| CAAGTGTGAGATTAAGGCTA+AGG | 0.549631 | 4.1:-56266336 | MS.gene63953:CDS |
| ATTAGATTTGATCTTCCACT+TGG | 0.551039 | 4.1:+56266664 | None:intergenic |
| CAACTGTAATCCTGGGGTCG+AGG | 0.556785 | 4.1:+56260995 | None:intergenic |
| ATCAATAAGATAAGTAGCAA+CGG | 0.558475 | 4.1:+56263162 | None:intergenic |
| TTCTTTACTTCAGAATGCAA+CGG | 0.560629 | 4.1:+56266932 | None:intergenic |
| AAAACAACTTCTAACAGTCA+TGG | 0.560693 | 4.1:-56266911 | MS.gene63953:CDS |
| GTGTGAGATTAAGGCTAAGG+AGG | 0.561310 | 4.1:-56266204 | MS.gene63953:CDS |
| GTGTGAGATTAAGGCTAAGG+AGG | 0.561310 | 4.1:-56266333 | MS.gene63953:CDS |
| TCAATACCATCAATTTGTTG+GGG | 0.562662 | 4.1:+56262686 | None:intergenic |
| TAAATTAAATACTCATCTGA+AGG | 0.562940 | 4.1:-56262288 | MS.gene63953:CDS |
| TTGCCCATGAAACCTTGTGC+AGG | 0.563384 | 4.1:-56266827 | MS.gene63953:CDS |
| TGTCGATGGTGTTAAAGAGA+AGG | 0.563593 | 4.1:-56264371 | MS.gene63953:intron |
| CCAAAGGTCTCAGATTCAGC+TGG | 0.566920 | 4.1:-56266257 | MS.gene63953:CDS |
| TGATAGATGCATTGAATGTA+CGG | 0.568758 | 4.1:+56262234 | None:intergenic |
| TTGGCTTCTTAACCGAAGAG+TGG | 0.573806 | 4.1:+56266276 | None:intergenic |
| TTACAGTTGCCTGGTGCAAG+AGG | 0.575577 | 4.1:-56260981 | MS.gene63953:CDS |
| TGGCTTCTTAACCGAAGAGT+GGG | 0.575831 | 4.1:+56266277 | None:intergenic |
| CTTCTTAACCGAAGAGTGCA+CGG | 0.576756 | 4.1:+56266409 | None:intergenic |
| AGGTTATTGTGAAGATTCAG+AGG | 0.577418 | 4.1:-56266711 | MS.gene63953:CDS |
| GCAGGAGAAGAAAGCTCTGA+AGG | 0.578061 | 4.1:-56264434 | MS.gene63953:intron |
| TTCTGCCCATCACCAGAGCT+AGG | 0.582392 | 4.1:+56265942 | None:intergenic |
| ACTTCACCCCAATCTATGAC+TGG | 0.582984 | 4.1:-56265528 | MS.gene63953:CDS |
| TGATTTGACTCCCGAGCAAG+AGG | 0.587907 | 4.1:-56265829 | MS.gene63953:CDS |
| CAATCATCTGTAATCATCAA+CGG | 0.588194 | 4.1:-56261576 | MS.gene63953:CDS |
| GATCTCAGAATCTAAAGTCA+GGG | 0.589771 | 4.1:+56260672 | None:intergenic |
| AGATAAACTACCTCGACCCC+AGG | 0.591486 | 4.1:-56261005 | MS.gene63953:CDS |
| AGGAAAAGTACGAGAAGGCT+AGG | 0.591495 | 4.1:-56263381 | MS.gene63953:CDS |
| CATGGGGCTGGTAAGGAGGA+GGG | 0.595300 | 4.1:+56265883 | None:intergenic |
| ACTCGTAAAATCTTTCGTGT+AGG | 0.595301 | 4.1:+56263210 | None:intergenic |
| ATATAACCTTGGCAGCTGGA+AGG | 0.595359 | 4.1:-56263521 | MS.gene63953:intron |
| CATCACAATTAATATTGGAA+AGG | 0.595422 | 4.1:-56263689 | MS.gene63953:CDS |
| TCACTTGTAGGCTGATCTGA+AGG | 0.595807 | 4.1:-56261369 | MS.gene63953:intron |
| TTTCAAAAGTTCAGAAAGAG+CGG | 0.612147 | 4.1:-56266511 | MS.gene63953:CDS |
| GACACGACAATACAGTTACA+TGG | 0.614948 | 4.1:-56263492 | MS.gene63953:CDS |
| TACACGTGGGCTATTGTCGA+TGG | 0.616541 | 4.1:-56264385 | MS.gene63953:CDS |
| CAATACCATCAATTTGTTGG+GGG | 0.616779 | 4.1:+56262687 | None:intergenic |
| ATACCTTGGGATGCTCTCCA+CGG | 0.618822 | 4.1:+56263871 | None:intergenic |
| GATGATGAAGCTGATACTGT+TGG | 0.622046 | 4.1:-56262748 | MS.gene63953:CDS |
| GTAAAATAATACCATTCACC+AGG | 0.623460 | 4.1:+56263640 | None:intergenic |
| TCTGAGAGCTGGTAATGAGA+AGG | 0.625156 | 4.1:-56263131 | MS.gene63953:intron |
| TGACAAGGAAAAGTACGAGA+AGG | 0.625601 | 4.1:-56263386 | MS.gene63953:CDS |
| CTTGAAGGGTCAAAGTGACA+AGG | 0.626740 | 4.1:-56263401 | MS.gene63953:CDS |
| TGGCCGTGGAGAGCATCCCA+AGG | 0.630872 | 4.1:-56263874 | MS.gene63953:intron |
| GAACCTCCAGGATTGTTCCG+TGG | 0.631215 | 4.1:-56263894 | MS.gene63953:CDS |
| GCAGCTAGTAGTTCCTTGAA+GGG | 0.640780 | 4.1:-56263415 | MS.gene63953:CDS |
| TTTGACTCCCGAGCAAGAGG+AGG | 0.643521 | 4.1:-56265826 | MS.gene63953:intron |
| TGGACTACGTTGGTTCACAA+TGG | 0.644140 | 4.1:-56265915 | MS.gene63953:CDS |
| GATTTGGACAGGGCAAGGAA+AGG | 0.645420 | 4.1:-56261335 | MS.gene63953:CDS |
| CTCTTCGGTTAAGAAGTCAA+AGG | 0.653479 | 4.1:-56266402 | MS.gene63953:CDS |
| CTCTTCGGTTAAGAAGCCAA+AGG | 0.670403 | 4.1:-56266273 | MS.gene63953:CDS |
| CAAGTATGAAAATACAGTTG+AGG | 0.671856 | 4.1:-56262471 | MS.gene63953:CDS |
| TTCGTACCAGTCATAGATTG+GGG | 0.674245 | 4.1:+56265522 | None:intergenic |
| ATAAACCATTGAGTTCCAAG+TGG | 0.674880 | 4.1:-56266679 | MS.gene63953:CDS |
| ACTTGATTGAATCTTTACCA+AGG | 0.682860 | 4.1:+56262489 | None:intergenic |
| AGATTTCTTGATAACAACAG+GGG | 0.685612 | 4.1:+56266622 | None:intergenic |
| ACCAGGCAACTGTAATCCTG+GGG | 0.690186 | 4.1:+56260989 | None:intergenic |
| ACAACTTCTAACAGTCATGG+AGG | 0.692828 | 4.1:-56266908 | MS.gene63953:CDS |
| GGATTATATAGAGAACATCA+GGG | 0.694922 | 4.1:-56263236 | MS.gene63953:CDS |
| AAGATTTCTTGATAACAACA+GGG | 0.695847 | 4.1:+56266621 | None:intergenic |
| TGCCTGGTGCAAGAGGCATG+AGG | 0.697851 | 4.1:-56260974 | MS.gene63953:CDS |
| TTTCTGGAATGACTGGCGAG+AGG | 0.711878 | 4.1:-56265593 | MS.gene63953:CDS |
| GCTGAAAGTAGATTTGGACA+GGG | 0.713723 | 4.1:-56261345 | MS.gene63953:CDS |
| AGCAAGAGGAGAAATACACG+TGG | 0.731818 | 4.1:-56264399 | MS.gene63953:CDS |
| GCAAGAGGAGAAATACACGT+GGG | 0.737208 | 4.1:-56264398 | MS.gene63953:CDS |
| CGGCCACGGAACAATCCTGG+AGG | 0.740857 | 4.1:+56263891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAATTTTGATTTTAGT+TGG | - | chr4.1:56262379-56262398 | MS.gene63953:intron | 10.0% |
| !!! | ATATGTAATTAATTACTTTT+GGG | - | chr4.1:56263040-56263059 | MS.gene63953:intron | 10.0% |
| !!! | CAAAATGAATTTTAATAATA+TGG | + | chr4.1:56263520-56263539 | None:intergenic | 10.0% |
| !!! | TATATGTAATTAATTACTTT+TGG | - | chr4.1:56263039-56263058 | MS.gene63953:intron | 10.0% |
| !! | AAACACAATTCATTAAAAAA+TGG | + | chr4.1:56261934-56261953 | None:intergenic | 15.0% |
| !! | ATAATATACATGAAAACAAA+AGG | + | chr4.1:56262654-56262673 | None:intergenic | 15.0% |
| !! | ATGTTTGAATTATATAGATT+TGG | - | chr4.1:56266267-56266286 | MS.gene63953:CDS | 15.0% |
| !! | TAATATACATGAAAACAAAA+GGG | + | chr4.1:56262653-56262672 | None:intergenic | 15.0% |
| !! | TCTAAAAATTCAATAGAAAA+AGG | + | chr4.1:56263680-56263699 | None:intergenic | 15.0% |
| !! | TGAATAACTTTGAATTAATT+GGG | + | chr4.1:56264252-56264271 | None:intergenic | 15.0% |
| !! | TTGAATAACTTTGAATTAAT+TGG | + | chr4.1:56264253-56264272 | None:intergenic | 15.0% |
| !! | TTTAATAACTTAAACTTACA+TGG | - | chr4.1:56265717-56265736 | MS.gene63953:intron | 15.0% |
| !!! | AAATTTTCATATTAACCAAT+TGG | + | chr4.1:56262359-56262378 | None:intergenic | 15.0% |
| !!! | ATTATTTTACCTAATCTTTT+TGG | - | chr4.1:56264074-56264093 | MS.gene63953:intron | 15.0% |
| !!! | ATTTGTTAACTACTTTTAAA+AGG | - | chr4.1:56262831-56262850 | MS.gene63953:intron | 15.0% |
| !!! | TATGTAATTAATTACTTTTG+GGG | - | chr4.1:56263041-56263060 | MS.gene63953:intron | 15.0% |
| !!! | TGTAAGTTTAAGTTATTAAA+AGG | + | chr4.1:56265717-56265736 | None:intergenic | 15.0% |
| !!! | TTTTCTATTAAATCTTCTTT+AGG | - | chr4.1:56263767-56263786 | MS.gene63953:intron | 15.0% |
| !! | AAAATATCATGTGAGAAATA+TGG | + | chr4.1:56264392-56264411 | None:intergenic | 20.0% |
| !! | AAATAGAAATTGATACATTC+TGG | - | chr4.1:56262283-56262302 | MS.gene63953:CDS | 20.0% |
| !! | ACAAAAAAGAATAATCAGTA+CGG | + | chr4.1:56265155-56265174 | None:intergenic | 20.0% |
| !! | ATAAAAGTTGTAGAAGAATT+AGG | + | chr4.1:56263390-56263409 | None:intergenic | 20.0% |
| !! | ATTAAAACAGATAATGAACA+AGG | + | chr4.1:56265180-56265199 | None:intergenic | 20.0% |
| !! | ATTTATTCTCCAAAAAGATT+AGG | + | chr4.1:56264086-56264105 | None:intergenic | 20.0% |
| !! | ATTTGACATAGAATATTTGA+CGG | - | chr4.1:56264780-56264799 | MS.gene63953:intron | 20.0% |
| !! | TAAATTAAATACTCATCTGA+AGG | - | chr4.1:56265413-56265432 | MS.gene63953:intron | 20.0% |
| !! | TACTTATCTTATTGATAAAC+TGG | - | chr4.1:56264546-56264565 | MS.gene63953:intron | 20.0% |
| !! | TTAGATGATAAGGTAAAAAT+AGG | - | chr4.1:56265492-56265511 | MS.gene63953:CDS | 20.0% |
| !! | TTATAATCATGCAAATAAAG+AGG | - | chr4.1:56266013-56266032 | MS.gene63953:CDS | 20.0% |
| !! | TTATAGTATTTACTTACTGA+CGG | - | chr4.1:56263938-56263957 | MS.gene63953:intron | 20.0% |
| !! | TTCAAAATTGCATTATAAAC+AGG | + | chr4.1:56265264-56265283 | None:intergenic | 20.0% |
| !! | TTGTGTTTACTTAAATACTT+TGG | - | chr4.1:56261946-56261965 | MS.gene63953:intron | 20.0% |
| !!! | AAACAAACCTATTTTAAAAG+CGG | + | chr4.1:56264749-56264768 | None:intergenic | 20.0% |
| !!! | AACTTATTCTTTTATCGATA+TGG | - | chr4.1:56266791-56266810 | MS.gene63953:CDS | 20.0% |
| !!! | ATAATTTGATTTTCAATTGC+TGG | + | chr4.1:56262541-56262560 | None:intergenic | 20.0% |
| !!! | ATTTTGTATATTTTGATCCA+AGG | + | chr4.1:56265835-56265854 | None:intergenic | 20.0% |
| !!! | GAATACTTTTGTAGATTTAT+TGG | + | chr4.1:56264822-56264841 | None:intergenic | 20.0% |
| !!! | TAAAAATCCGCTTTTAAAAT+AGG | - | chr4.1:56264739-56264758 | MS.gene63953:intron | 20.0% |
| !!! | TAATTTTGTGTTTTAGTGAA+GGG | + | chr4.1:56264640-56264659 | None:intergenic | 20.0% |
| !!! | TTTTGAAATAGACTTCTTAT+CGG | + | chr4.1:56261178-56261197 | None:intergenic | 20.0% |
| ! | AAAAGGTCAGACAATTTAAT+AGG | + | chr4.1:56263663-56263682 | None:intergenic | 25.0% |
| ! | AACACAAAATTACATACAAG+AGG | - | chr4.1:56264648-56264667 | MS.gene63953:intron | 25.0% |
| ! | AAGAATTAGGAGAAAATAAC+AGG | + | chr4.1:56263377-56263396 | None:intergenic | 25.0% |
| ! | AAGTAGTAAACAAATATCAG+TGG | + | chr4.1:56266922-56266941 | None:intergenic | 25.0% |
| ! | AATAACTAGCATAATACCTT+GGG | + | chr4.1:56263846-56263865 | None:intergenic | 25.0% |
| ! | ACAAGAAATATCAAGAGTAA+AGG | + | chr4.1:56263477-56263496 | None:intergenic | 25.0% |
| ! | AGGACATTAATTAAAAAAGC+TGG | + | chr4.1:56262683-56262702 | None:intergenic | 25.0% |
| ! | AGTGACATCACAATTAATAT+TGG | - | chr4.1:56264007-56264026 | MS.gene63953:intron | 25.0% |
| ! | ATATTAATTGTGATGTCACT+TGG | + | chr4.1:56264007-56264026 | None:intergenic | 25.0% |
| ! | ATCAATAAGATAAGTAGCAA+CGG | + | chr4.1:56264542-56264561 | None:intergenic | 25.0% |
| ! | ATCTATCACATTAGATGATA+AGG | - | chr4.1:56265482-56265501 | MS.gene63953:intron | 25.0% |
| ! | ATGATCAAGTTATATAACCT+TGG | - | chr4.1:56264169-56264188 | MS.gene63953:intron | 25.0% |
| ! | ATTAGTTGAATCACATGATT+TGG | - | chr4.1:56262443-56262462 | MS.gene63953:CDS | 25.0% |
| ! | ATTCAAATTCAAACATGCAA+TGG | + | chr4.1:56266539-56266558 | None:intergenic | 25.0% |
| ! | ATTGAAATTCAAACATGCAA+TGG | + | chr4.1:56266476-56266495 | None:intergenic | 25.0% |
| ! | CAAAAAAGAATAATCAGTAC+GGG | + | chr4.1:56265154-56265173 | None:intergenic | 25.0% |
| ! | CATCACAATTAATATTGGAA+AGG | - | chr4.1:56264012-56264031 | MS.gene63953:intron | 25.0% |
| ! | CTATTAAATCTTCTTTAGGT+TGG | - | chr4.1:56263771-56263790 | MS.gene63953:intron | 25.0% |
| ! | GAGTAAAAATGCTTTATAAG+GGG | - | chr4.1:56261841-56261860 | MS.gene63953:intron | 25.0% |
| ! | GGAAGTTTATGTTATTAGAT+GGG | - | chr4.1:56263959-56263978 | MS.gene63953:intron | 25.0% |
| ! | GGAGTAAAAATGCTTTATAA+GGG | - | chr4.1:56261840-56261859 | MS.gene63953:intron | 25.0% |
| ! | GGTATTATGCTAGTTATTAT+TGG | - | chr4.1:56263848-56263867 | MS.gene63953:intron | 25.0% |
| ! | GTGAATTAGGATGAAAATAT+TGG | - | chr4.1:56266035-56266054 | MS.gene63953:CDS | 25.0% |
| ! | GTTCAGATTTGATTCAAATT+GGG | + | chr4.1:56266850-56266869 | None:intergenic | 25.0% |
| ! | TAATAACTAGCATAATACCT+TGG | + | chr4.1:56263847-56263866 | None:intergenic | 25.0% |
| ! | TAGGTTTGTATAATTGAAGT+AGG | - | chr4.1:56264689-56264708 | MS.gene63953:intron | 25.0% |
| ! | TCATTTACGATAGGAAATAA+TGG | + | chr4.1:56262483-56262502 | None:intergenic | 25.0% |
| ! | TCTTATAGTATGTACTATGT+GGG | - | chr4.1:56263150-56263169 | MS.gene63953:CDS | 25.0% |
| ! | TGGAGTAAAAATGCTTTATA+AGG | - | chr4.1:56261839-56261858 | MS.gene63953:intron | 25.0% |
| ! | TTCAGTAGAATATTCCAATA+GGG | + | chr4.1:56262612-56262631 | None:intergenic | 25.0% |
| ! | TTTAAACAGTGTTCAGAAAA+TGG | - | chr4.1:56263591-56263610 | MS.gene63953:intron | 25.0% |
| ! | TTTACTCTTGATATTTCTTG+TGG | - | chr4.1:56263476-56263495 | MS.gene63953:CDS | 25.0% |
| ! | TTTATTAATTGCATTTGCTC+AGG | - | chr4.1:56264928-56264947 | MS.gene63953:intron | 25.0% |
| ! | TTTCGTAACATCAATGAAAT+CGG | + | chr4.1:56262792-56262811 | None:intergenic | 25.0% |
| !! | AAGATTTCTTGATAACAACA+GGG | + | chr4.1:56261083-56261102 | None:intergenic | 25.0% |
| !! | ATTAATTTAGGATCCTTTAG+GGG | - | chr4.1:56265080-56265099 | MS.gene63953:intron | 25.0% |
| !! | CATTTTCTCAATTTTTGCAT+TGG | + | chr4.1:56266621-56266640 | None:intergenic | 25.0% |
| !! | CTTTTGTAGATTTATTGGAA+AGG | + | chr4.1:56264817-56264836 | None:intergenic | 25.0% |
| !! | GATTAATTTAGGATCCTTTA+GGG | - | chr4.1:56265079-56265098 | MS.gene63953:intron | 25.0% |
| !! | TGATTAATTTAGGATCCTTT+AGG | - | chr4.1:56265078-56265097 | MS.gene63953:intron | 25.0% |
| !! | TGTGGATATGATTTTATCTT+TGG | - | chr4.1:56263494-56263513 | MS.gene63953:CDS | 25.0% |
| !! | TTCAATACCATCAATTTGTT+GGG | + | chr4.1:56265019-56265038 | None:intergenic | 25.0% |
| !! | TTCACTATTTAAAATTAGCG+TGG | - | chr4.1:56262740-56262759 | MS.gene63953:CDS | 25.0% |
| !! | TTTTGTCAATATCTTCTTAG+TGG | + | chr4.1:56261601-56261620 | None:intergenic | 25.0% |
| !!! | AATTTTGTGTTTTAGTGAAG+GGG | + | chr4.1:56264639-56264658 | None:intergenic | 25.0% |
| !!! | ATAAAGCATTTTTACTCCAT+GGG | + | chr4.1:56261838-56261857 | None:intergenic | 25.0% |
| !!! | ATTGCCAGATTTTAATTTCT+TGG | - | chr4.1:56264438-56264457 | MS.gene63953:intron | 25.0% |
| !!! | GTAATTTTGTGTTTTAGTGA+AGG | + | chr4.1:56264641-56264660 | None:intergenic | 25.0% |
| !!! | GTACTGATTATTCTTTTTTG+TGG | - | chr4.1:56265154-56265173 | MS.gene63953:intron | 25.0% |
| !!! | TATAAAGCATTTTTACTCCA+TGG | + | chr4.1:56261839-56261858 | None:intergenic | 25.0% |
| !!! | TATATAGATTTGGCTTTTCT+GGG | - | chr4.1:56266277-56266296 | MS.gene63953:CDS | 25.0% |
| !!! | TCAAATTTTTTAGGCAAGTT+CGG | + | chr4.1:56260688-56260707 | None:intergenic | 25.0% |
| !!! | TCGTAGTCATCAAATTTTTT+AGG | + | chr4.1:56260697-56260716 | None:intergenic | 25.0% |
| !!! | TTATATAGATTTGGCTTTTC+TGG | - | chr4.1:56266276-56266295 | MS.gene63953:CDS | 25.0% |
| AAAAAACAAAGCTTTCGACT+TGG | + | chr4.1:56264138-56264157 | None:intergenic | 30.0% | |
| AAAACAACTTCTAACAGTCA+TGG | - | chr4.1:56260790-56260809 | MS.gene63953:intron | 30.0% | |
| AAAACATGATGGTCAATTAC+AGG | + | chr4.1:56263415-56263434 | None:intergenic | 30.0% | |
| AAAAGAGAGAAAAACACTTG+AGG | + | chr4.1:56265347-56265366 | None:intergenic | 30.0% | |
| AAAGAGAGAAAAACACTTGA+GGG | + | chr4.1:56265346-56265365 | None:intergenic | 30.0% | |
| AAATGACTACAGAAGTAAGT+TGG | - | chr4.1:56262224-56262243 | MS.gene63953:CDS | 30.0% | |
| AAGAACAAGTCTAAACAATC+AGG | - | chr4.1:56261699-56261718 | MS.gene63953:CDS | 30.0% | |
| AAGCTATACTTGCTTGAATA+AGG | + | chr4.1:56265867-56265886 | None:intergenic | 30.0% | |
| AATATCTTCTTAGTGGAAGA+TGG | + | chr4.1:56261594-56261613 | None:intergenic | 30.0% | |
| AATATGATTCATGATGATCG+TGG | - | chr4.1:56266493-56266512 | MS.gene63953:CDS | 30.0% | |
| AATTCATGCATGGCAAAATT+GGG | - | chr4.1:56262907-56262926 | MS.gene63953:intron | 30.0% | |
| ACTTGATTGAATCTTTACCA+AGG | + | chr4.1:56265215-56265234 | None:intergenic | 30.0% | |
| AGATCTTAAAACTGTAGCAT+TGG | - | chr4.1:56266664-56266683 | MS.gene63953:CDS | 30.0% | |
| AGGATTATATAGAGAACATC+AGG | - | chr4.1:56264464-56264483 | MS.gene63953:intron | 30.0% | |
| AGTACATACTATAAGAGACA+TGG | + | chr4.1:56263146-56263165 | None:intergenic | 30.0% | |
| ATAAGTTCAAGGAGAATTTC+TGG | - | chr4.1:56262092-56262111 | MS.gene63953:intron | 30.0% | |
| ATGTGATGATTTCTTGTGTT+AGG | - | chr4.1:56265895-56265914 | MS.gene63953:CDS | 30.0% | |
| ATGTGATTCAACTAATCACA+TGG | + | chr4.1:56262439-56262458 | None:intergenic | 30.0% | |
| ATTAGATTTGATCTTCCACT+TGG | + | chr4.1:56261040-56261059 | None:intergenic | 30.0% | |
| CAAGTATGAAAATACAGTTG+AGG | - | chr4.1:56265230-56265249 | MS.gene63953:intron | 30.0% | |
| CAATCATCTGTAATCATCAA+CGG | - | chr4.1:56266125-56266144 | MS.gene63953:CDS | 30.0% | |
| CGGAAGTTTATGTTATTAGA+TGG | - | chr4.1:56263958-56263977 | MS.gene63953:intron | 30.0% | |
| CTATTGGAATATTCTACTGA+AGG | - | chr4.1:56262611-56262630 | MS.gene63953:intron | 30.0% | |
| CTCTTATAGTATGTACTATG+TGG | - | chr4.1:56263149-56263168 | MS.gene63953:CDS | 30.0% | |
| CTTCAATACCATCAATTTGT+TGG | + | chr4.1:56265020-56265039 | None:intergenic | 30.0% | |
| CTTCAGTAGAATATTCCAAT+AGG | + | chr4.1:56262613-56262632 | None:intergenic | 30.0% | |
| GAAAAAACGTCATTTACGAT+AGG | + | chr4.1:56262492-56262511 | None:intergenic | 30.0% | |
| GAATTCTGTTATTCATGTAC+TGG | + | chr4.1:56262892-56262911 | None:intergenic | 30.0% | |
| GATCTTAAAACTGTAGCATT+GGG | - | chr4.1:56266665-56266684 | MS.gene63953:CDS | 30.0% | |
| GGATTATATAGAGAACATCA+GGG | - | chr4.1:56264465-56264484 | MS.gene63953:intron | 30.0% | |
| GGTTCAGATTTGATTCAAAT+TGG | + | chr4.1:56266851-56266870 | None:intergenic | 30.0% | |
| GTAAAATAATACCATTCACC+AGG | + | chr4.1:56264064-56264083 | None:intergenic | 30.0% | |
| GTATTAAACTGTGAGATTGT+AGG | + | chr4.1:56262711-56262730 | None:intergenic | 30.0% | |
| GTTACTAAAGTGAATAAGTC+TGG | - | chr4.1:56261621-56261640 | MS.gene63953:intron | 30.0% | |
| GTTATTCAAGTATGTGTTTC+TGG | - | chr4.1:56264264-56264283 | MS.gene63953:intron | 30.0% | |
| GTTTCATTCTTCACATTAAC+AGG | + | chr4.1:56260946-56260965 | None:intergenic | 30.0% | |
| TGAAAATCTCTTTGATATGC+TGG | - | chr4.1:56265383-56265402 | MS.gene63953:intron | 30.0% | |
| TGAATAACAGAATTCATGCA+TGG | - | chr4.1:56262897-56262916 | MS.gene63953:intron | 30.0% | |
| TGATAGATGCATTGAATGTA+CGG | + | chr4.1:56265470-56265489 | None:intergenic | 30.0% | |
| TGCAAATAAAGAGGTGAATT+AGG | - | chr4.1:56266022-56266041 | MS.gene63953:CDS | 30.0% | |
| TGCACCAAGAAATTAAAATC+TGG | + | chr4.1:56264445-56264464 | None:intergenic | 30.0% | |
| TGGTTGGGTTTGATTAATTT+AGG | - | chr4.1:56265068-56265087 | MS.gene63953:intron | 30.0% | |
| TTCTTTACTTCAGAATGCAA+CGG | + | chr4.1:56260772-56260791 | None:intergenic | 30.0% | |
| TTGAATAAGGACACTAAAGA+TGG | - | chr4.1:56265966-56265985 | MS.gene63953:CDS | 30.0% | |
| TTTCAAAAGTTCAGAAAGAG+CGG | - | chr4.1:56261190-56261209 | MS.gene63953:intron | 30.0% | |
| ! | AATTCATTTTGCTGAATCTG+TGG | - | chr4.1:56263529-56263548 | MS.gene63953:intron | 30.0% |
| ! | AGATTTCTTGATAACAACAG+GGG | + | chr4.1:56261082-56261101 | None:intergenic | 30.0% |
| ! | ATATCAAAGAGATTTTCACC+AGG | + | chr4.1:56265381-56265400 | None:intergenic | 30.0% |
| ! | ATCTTAACCAGCTTTTCTTT+GGG | + | chr4.1:56265587-56265606 | None:intergenic | 30.0% |
| ! | ATTTTTATACAGAGTAAGCC+AGG | + | chr4.1:56264726-56264745 | None:intergenic | 30.0% |
| ! | GAAGATTTCTTGATAACAAC+AGG | + | chr4.1:56261084-56261103 | None:intergenic | 30.0% |
| ! | TATCAAAGAGATTTTCACCA+GGG | + | chr4.1:56265380-56265399 | None:intergenic | 30.0% |
| ! | TATTTTCACCTTTGTTCTTC+TGG | - | chr4.1:56265048-56265067 | MS.gene63953:intron | 30.0% |
| ! | TGATTGTTTAGACTTGTTCT+TGG | + | chr4.1:56261700-56261719 | None:intergenic | 30.0% |
| ! | TGCAATGGTTAAAGATGTTT+TGG | + | chr4.1:56266524-56266543 | None:intergenic | 30.0% |
| ! | TTAATGCAGTTTAACTTCCT+TGG | - | chr4.1:56265195-56265214 | MS.gene63953:intron | 30.0% |
| ! | TTTTTCTCTAACCTGTACAT+TGG | + | chr4.1:56266587-56266606 | None:intergenic | 30.0% |
| !! | CTGGGTATTTTTATCAAAGA+CGG | + | chr4.1:56265784-56265803 | None:intergenic | 30.0% |
| !! | GAATTAGTTTCTCACCTTTT+TGG | + | chr4.1:56265290-56265309 | None:intergenic | 30.0% |
| !! | GATGGTTTATCGGTTAATTT+TGG | + | chr4.1:56261576-56261595 | None:intergenic | 30.0% |
| !! | GCGAATCTTTTGAAAGTTAT+TGG | + | chr4.1:56260739-56260758 | None:intergenic | 30.0% |
| !! | TAAAGCATTTTTACTCCATG+GGG | + | chr4.1:56261837-56261856 | None:intergenic | 30.0% |
| !! | TCAATACCATCAATTTGTTG+GGG | + | chr4.1:56265018-56265037 | None:intergenic | 30.0% |
| !! | TGGGTATTTTTATCAAAGAC+GGG | + | chr4.1:56265783-56265802 | None:intergenic | 30.0% |
| !!! | AGATTTTAATTTCTTGGTGC+AGG | - | chr4.1:56264444-56264463 | MS.gene63953:intron | 30.0% |
| !!! | ATTTTGTGTTTTAGTGAAGG+GGG | + | chr4.1:56264638-56264657 | None:intergenic | 30.0% |
| !!! | CAGAAAATGGTTGCTTTTAA+GGG | - | chr4.1:56263604-56263623 | MS.gene63953:intron | 30.0% |
| !!! | GCAATTTTGAAGTTCCAAAA+AGG | - | chr4.1:56265273-56265292 | MS.gene63953:intron | 30.0% |
| !!! | GTATATTTTGATCCAAGGTT+GGG | + | chr4.1:56265830-56265849 | None:intergenic | 30.0% |
| !!! | TCAGAAAATGGTTGCTTTTA+AGG | - | chr4.1:56263603-56263622 | MS.gene63953:intron | 30.0% |
| !!! | TGGAACATTACTTTTTTGAG+TGG | - | chr4.1:56262303-56262322 | MS.gene63953:CDS | 30.0% |
| !!! | TGTATATTTTGATCCAAGGT+TGG | + | chr4.1:56265831-56265850 | None:intergenic | 30.0% |
| !!! | TTTTCTAGTTCTCTCTTAAC+TGG | + | chr4.1:56261264-56261283 | None:intergenic | 30.0% |
| AACTGTTGTCACACAATTCA+AGG | + | chr4.1:56265948-56265967 | None:intergenic | 35.0% | |
| AAGAAATATCATACAGTCCC+AGG | + | chr4.1:56266240-56266259 | None:intergenic | 35.0% | |
| AATATATGAGATCGTGAACC+TGG | - | chr4.1:56266219-56266238 | MS.gene63953:CDS | 35.0% | |
| ACCAATTGGTGTGTACATAT+TGG | + | chr4.1:56262345-56262364 | None:intergenic | 35.0% | |
| ACTACTAAACTGTACCCTAT+TGG | - | chr4.1:56262595-56262614 | MS.gene63953:intron | 35.0% | |
| ACTCGTAAAATCTTTCGTGT+AGG | + | chr4.1:56264494-56264513 | None:intergenic | 35.0% | |
| AGAAAATGCAACGTGATATG+AGG | - | chr4.1:56266633-56266652 | MS.gene63953:CDS | 35.0% | |
| AGAAAGCTAAATTACGCTTC+AGG | + | chr4.1:56266441-56266460 | None:intergenic | 35.0% | |
| AGGTATCTGCTTTGATGTAA+GGG | + | chr4.1:56265681-56265700 | None:intergenic | 35.0% | |
| AGGTTATTGTGAAGATTCAG+AGG | - | chr4.1:56260990-56261009 | MS.gene63953:CDS | 35.0% | |
| ATAAACCATTGAGTTCCAAG+TGG | - | chr4.1:56261022-56261041 | MS.gene63953:CDS | 35.0% | |
| ATATATGAGATCGTGAACCT+GGG | - | chr4.1:56266220-56266239 | MS.gene63953:CDS | 35.0% | |
| ATTCATGCATGGCAAAATTG+GGG | - | chr4.1:56262908-56262927 | MS.gene63953:intron | 35.0% | |
| CAAGAAATCTTCTCAAGACT+CGG | - | chr4.1:56261092-56261111 | MS.gene63953:CDS | 35.0% | |
| CAGTTACATGGTTATGCTAT+TGG | - | chr4.1:56264221-56264240 | MS.gene63953:intron | 35.0% | |
| CATGCAGAAAGATAAGTTCA+AGG | - | chr4.1:56262081-56262100 | MS.gene63953:intron | 35.0% | |
| CCATCAAATTCGTCTTCATT+AGG | - | chr4.1:56260907-56260926 | MS.gene63953:intron | 35.0% | |
| CCTAATGAAGACGAATTTGA+TGG | + | chr4.1:56260910-56260929 | None:intergenic | 35.0% | |
| CCTATTGAACACTCTAGTAA+AGG | - | chr4.1:56260970-56260989 | MS.gene63953:CDS | 35.0% | |
| CGTAAAGGGAAAAACAAAAG+GGG | + | chr4.1:56263248-56263267 | None:intergenic | 35.0% | |
| CTCCTCTCTAAATAAAGAAC+AGG | + | chr4.1:56263018-56263037 | None:intergenic | 35.0% | |
| CTGTGTAATACTAAGACGTA+AGG | + | chr4.1:56265627-56265646 | None:intergenic | 35.0% | |
| CTTAGTGGAAGATGGTTTAT+CGG | + | chr4.1:56261586-56261605 | None:intergenic | 35.0% | |
| CTTTGTCAGCAAAGTTCTTA+CGG | - | chr4.1:56261133-56261152 | MS.gene63953:intron | 35.0% | |
| GAAAAGAAAAAGCAGTGAAG+AGG | + | chr4.1:56265749-56265768 | None:intergenic | 35.0% | |
| GAAATAACGTGCAAATTCAC+CGG | + | chr4.1:56263639-56263658 | None:intergenic | 35.0% | |
| GAATTCATGCATGGCAAAAT+TGG | - | chr4.1:56262906-56262925 | MS.gene63953:intron | 35.0% | |
| GACATGAATTACAACCTTTC+AGG | + | chr4.1:56263205-56263224 | None:intergenic | 35.0% | |
| GAGACATGGAAATCAGAATA+AGG | + | chr4.1:56263132-56263151 | None:intergenic | 35.0% | |
| GCGTAAAGGGAAAAACAAAA+GGG | + | chr4.1:56263249-56263268 | None:intergenic | 35.0% | |
| GGAAGAAAAAATGAAGCAAG+AGG | - | chr4.1:56263288-56263307 | MS.gene63953:intron | 35.0% | |
| GGTCTTTAAATATGCTTTGC+AGG | - | chr4.1:56262021-56262040 | MS.gene63953:intron | 35.0% | |
| GTAAGAACTTTGCTGACAAA+GGG | + | chr4.1:56261134-56261153 | None:intergenic | 35.0% | |
| GTGTTTAGTGCCTTCATTAT+CGG | - | chr4.1:56264874-56264893 | MS.gene63953:intron | 35.0% | |
| GTTCAGATGGAAAAAGCAAA+CGG | - | chr4.1:56266406-56266425 | MS.gene63953:CDS | 35.0% | |
| GTTGAATGAAAAAGAACCGA+AGG | - | chr4.1:56262569-56262588 | MS.gene63953:intron | 35.0% | |
| TAAACAATCAGGCAGAGATT+CGG | - | chr4.1:56261710-56261729 | MS.gene63953:CDS | 35.0% | |
| TAATACCATTCACCAGGAAT+AGG | + | chr4.1:56264058-56264077 | None:intergenic | 35.0% | |
| TCCAATATGTACACACCAAT+TGG | - | chr4.1:56262341-56262360 | MS.gene63953:intron | 35.0% | |
| TGAGAAAATTGACGAACTTC+AGG | - | chr4.1:56266189-56266208 | MS.gene63953:CDS | 35.0% | |
| TGCGTAAAGGGAAAAACAAA+AGG | + | chr4.1:56263250-56263269 | None:intergenic | 35.0% | |
| TGTGTGACAACAGTTGAATA+AGG | - | chr4.1:56265953-56265972 | MS.gene63953:CDS | 35.0% | |
| TTATCGGATGTTCCTGAATT+AGG | + | chr4.1:56261162-56261181 | None:intergenic | 35.0% | |
| TTCCATCTGAACTCTTTGTA+GGG | + | chr4.1:56266398-56266417 | None:intergenic | 35.0% | |
| TTCTGTCAAGTGTGAGATTA+AGG | - | chr4.1:56261359-56261378 | MS.gene63953:CDS | 35.0% | |
| TTCTTACGGAAACCTAATTC+AGG | - | chr4.1:56261147-56261166 | MS.gene63953:intron | 35.0% | |
| TTCTTCACATTAACAGGCTT+TGG | + | chr4.1:56260940-56260959 | None:intergenic | 35.0% | |
| TTCTTGAATCTGTGGGAAAT+GGG | + | chr4.1:56261549-56261568 | None:intergenic | 35.0% | |
| TTGTACCATGTTAACCTGAA+AGG | - | chr4.1:56263188-56263207 | MS.gene63953:CDS | 35.0% | |
| TTTCCATCTGAACTCTTTGT+AGG | + | chr4.1:56266399-56266418 | None:intergenic | 35.0% | |
| TTTCCGCTTACAAAACATGA+TGG | + | chr4.1:56263426-56263445 | None:intergenic | 35.0% | |
| TTTCGTACCAGTCATAGATT+GGG | + | chr4.1:56262183-56262202 | None:intergenic | 35.0% | |
| ! | AAATTTTGCCAGCAGAGATT+TGG | + | chr4.1:56266989-56267008 | None:intergenic | 35.0% |
| ! | AAGTAGGTATTGTTTGTTCC+TGG | - | chr4.1:56264705-56264724 | MS.gene63953:intron | 35.0% |
| ! | ACCTATACATTCGTGTCTTT+TGG | + | chr4.1:56264674-56264693 | None:intergenic | 35.0% |
| ! | CACAACGATTCATATCGATT+GGG | + | chr4.1:56266872-56266891 | None:intergenic | 35.0% |
| ! | CACGAAAGATTTTACGAGTA+AGG | - | chr4.1:56264495-56264514 | MS.gene63953:intron | 35.0% |
| ! | CCTTTACTAGAGTGTTCAAT+AGG | + | chr4.1:56260973-56260992 | None:intergenic | 35.0% |
| ! | GATCTTAACCAGCTTTTCTT+TGG | + | chr4.1:56265588-56265607 | None:intergenic | 35.0% |
| ! | GTCCTGTTCTTTATTTAGAG+AGG | - | chr4.1:56263013-56263032 | MS.gene63953:intron | 35.0% |
| ! | TCTTAACCAGCTTTTCTTTG+GGG | + | chr4.1:56265586-56265605 | None:intergenic | 35.0% |
| ! | TGACCATCATGTTTTGTAAG+CGG | - | chr4.1:56263420-56263439 | MS.gene63953:CDS | 35.0% |
| ! | TGGTGAACATCTGAAATTTC+AGG | + | chr4.1:56266969-56266988 | None:intergenic | 35.0% |
| ! | TTGTGATTCAGGTTCAAAAC+AGG | + | chr4.1:56266895-56266914 | None:intergenic | 35.0% |
| !! | ACAAAAGGGTATCGTTTAGT+AGG | + | chr4.1:56262639-56262658 | None:intergenic | 35.0% |
| !! | CAATACCATCAATTTGTTGG+GGG | + | chr4.1:56265017-56265036 | None:intergenic | 35.0% |
| !! | CATCAATGAAATCGGTGTTA+CGG | + | chr4.1:56262784-56262803 | None:intergenic | 35.0% |
| !! | CTGAGTTTTTGACTGTATTG+TGG | - | chr4.1:56262000-56262019 | MS.gene63953:intron | 35.0% |
| !! | TAAAAGGATTTTTCAGCCTC+AGG | + | chr4.1:56265701-56265720 | None:intergenic | 35.0% |
| !! | TACAACCTTTCAGGTTAACA+TGG | + | chr4.1:56263196-56263215 | None:intergenic | 35.0% |
| !! | TTCATCCTCAGAATTTTGAC+TGG | - | chr4.1:56263905-56263924 | MS.gene63953:CDS | 35.0% |
| !!! | TTTTGTTTTTCCCTTTACGC+AGG | - | chr4.1:56263249-56263268 | MS.gene63953:intron | 35.0% |
| AAACCCAACCAGAAGAACAA+AGG | + | chr4.1:56265059-56265078 | None:intergenic | 40.0% | |
| AATATTTGACGGTGTAGCCA+CGG | - | chr4.1:56264791-56264810 | MS.gene63953:intron | 40.0% | |
| AATGTCCTATTCCTGGTGAA+TGG | - | chr4.1:56264050-56264069 | MS.gene63953:intron | 40.0% | |
| AATTCCTGCACAAGGTTTCA+TGG | + | chr4.1:56260881-56260900 | None:intergenic | 40.0% | |
| AATTTCAGAGTTGAACCTCC+AGG | - | chr4.1:56263795-56263814 | MS.gene63953:intron | 40.0% | |
| ACAACTTCTAACAGTCATGG+AGG | - | chr4.1:56260793-56260812 | MS.gene63953:intron | 40.0% | |
| ACAGTTTAGTAGTGCTCCTT+CGG | + | chr4.1:56262588-56262607 | None:intergenic | 40.0% | |
| AGAAGCCAGTCAAAATTCTG+AGG | + | chr4.1:56263913-56263932 | None:intergenic | 40.0% | |
| AGAATAATCAGTACGGGAAC+AGG | + | chr4.1:56265148-56265167 | None:intergenic | 40.0% | |
| AGCTGAAAGTAGATTTGGAC+AGG | - | chr4.1:56266355-56266374 | MS.gene63953:CDS | 40.0% | |
| AGGCAACAGAGAAGAAACTA+AGG | - | chr4.1:56262851-56262870 | MS.gene63953:intron | 40.0% | |
| AGTTATATAACCTTGGCAGC+TGG | - | chr4.1:56264176-56264195 | MS.gene63953:intron | 40.0% | |
| ATCTTCCACTTGGAACTCAA+TGG | + | chr4.1:56261030-56261049 | None:intergenic | 40.0% | |
| ATTCCTGAATGTCCTATTCC+TGG | - | chr4.1:56264043-56264062 | MS.gene63953:intron | 40.0% | |
| ATTCCTGCACAAGGTTTCAT+GGG | + | chr4.1:56260880-56260899 | None:intergenic | 40.0% | |
| CAAGTGTGAGATTAAGGCTA+AGG | - | chr4.1:56261365-56261384 | MS.gene63953:intron | 40.0% | |
| CACCTTCGATTATGTGTTCA+TGG | + | chr4.1:56266303-56266322 | None:intergenic | 40.0% | |
| CAGATGATTGCAACCTGTTA+CGG | + | chr4.1:56266115-56266134 | None:intergenic | 40.0% | |
| CAGCCTACAAGTGAAGATTA+AGG | + | chr4.1:56266326-56266345 | None:intergenic | 40.0% | |
| CAGGTATCTGCTTTGATGTA+AGG | + | chr4.1:56265682-56265701 | None:intergenic | 40.0% | |
| CGTAAGAACTTTGCTGACAA+AGG | + | chr4.1:56261135-56261154 | None:intergenic | 40.0% | |
| CTCTGTCAAGTGTGAGATTA+AGG | - | chr4.1:56261488-56261507 | MS.gene63953:intron | 40.0% | |
| CTCTTCGGTTAAGAAGTCAA+AGG | - | chr4.1:56261299-56261318 | MS.gene63953:CDS | 40.0% | |
| CTGTGAGATTGTAGGATTCA+AGG | + | chr4.1:56262703-56262722 | None:intergenic | 40.0% | |
| CTTCTTGAATCTGTGGGAAA+TGG | + | chr4.1:56261550-56261569 | None:intergenic | 40.0% | |
| CTTTCGTACCAGTCATAGAT+TGG | + | chr4.1:56262184-56262203 | None:intergenic | 40.0% | |
| GAAGGAGCTGAAAGTAGATT+TGG | - | chr4.1:56266350-56266369 | MS.gene63953:CDS | 40.0% | |
| GAAGTTTGGCCATTTGAAGA+AGG | + | chr4.1:56260847-56260866 | None:intergenic | 40.0% | |
| GACACGACAATACAGTTACA+TGG | - | chr4.1:56264209-56264228 | MS.gene63953:intron | 40.0% | |
| GATAAACCGTCCGATAATGA+AGG | + | chr4.1:56264887-56264906 | None:intergenic | 40.0% | |
| GCACAACGATTCATATCGAT+TGG | + | chr4.1:56266873-56266892 | None:intergenic | 40.0% | |
| GCCAAAAGACACGAATGTAT+AGG | - | chr4.1:56264670-56264689 | MS.gene63953:intron | 40.0% | |
| GCTGAAAGTAGATTTGGACA+GGG | - | chr4.1:56266356-56266375 | MS.gene63953:CDS | 40.0% | |
| GGAATAGGACATTCAGGAAT+TGG | + | chr4.1:56264043-56264062 | None:intergenic | 40.0% | |
| GGTTAAGAAGTCAAAGGTCT+CGG | - | chr4.1:56261305-56261324 | MS.gene63953:CDS | 40.0% | |
| GTGCCTTAATCTTCACTTGT+AGG | - | chr4.1:56266320-56266339 | MS.gene63953:CDS | 40.0% | |
| TACATCAAAGCAGATACCTG+AGG | - | chr4.1:56265682-56265701 | MS.gene63953:intron | 40.0% | |
| TAGATTTATTGGAAAGGCCG+TGG | + | chr4.1:56264811-56264830 | None:intergenic | 40.0% | |
| TCAAAGACGGGAATTCATGT+TGG | + | chr4.1:56265771-56265790 | None:intergenic | 40.0% | |
| TCCACTTAGAAAACCCCTAA+AGG | + | chr4.1:56265096-56265115 | None:intergenic | 40.0% | |
| TCCATCTGAACTCTTTGTAG+GGG | + | chr4.1:56266397-56266416 | None:intergenic | 40.0% | |
| TCGTGGTTTATCCAATGTAC+AGG | - | chr4.1:56266573-56266592 | MS.gene63953:CDS | 40.0% | |
| TGACTGGTACGAAAGTGAAA+AGG | - | chr4.1:56262189-56262208 | MS.gene63953:intron | 40.0% | |
| TGGTGACTTCTTGAATCTGT+GGG | + | chr4.1:56261556-56261575 | None:intergenic | 40.0% | |
| TTAACCGAAGAGTGGGAAAT+GGG | + | chr4.1:56261420-56261439 | None:intergenic | 40.0% | |
| TTAGTGCCTTCATTATCGGA+CGG | - | chr4.1:56264878-56264897 | MS.gene63953:intron | 40.0% | |
| TTCACCTTTGTTCTTCTGGT+TGG | - | chr4.1:56265052-56265071 | MS.gene63953:intron | 40.0% | |
| TTCGTACCAGTCATAGATTG+GGG | + | chr4.1:56262182-56262201 | None:intergenic | 40.0% | |
| TTGATCCAAGGTTGGGTATA+GGG | + | chr4.1:56265823-56265842 | None:intergenic | 40.0% | |
| TTTGATCCAAGGTTGGGTAT+AGG | + | chr4.1:56265824-56265843 | None:intergenic | 40.0% | |
| ! | AGTCTGTCTTTTTCCGTAAC+AGG | - | chr4.1:56266099-56266118 | MS.gene63953:CDS | 40.0% |
| ! | CTCTTTTCAGATAAAAGCCC+TGG | - | chr4.1:56265360-56265379 | MS.gene63953:intron | 40.0% |
| ! | TCACCTTTGTTCTTCTGGTT+GGG | - | chr4.1:56265053-56265072 | MS.gene63953:intron | 40.0% |
| ! | TCTGCTGGCAAAATTTGCTT+GGG | - | chr4.1:56266993-56267012 | MS.gene63953:CDS | 40.0% |
| ! | TGACAAGGAAAAGTACGAGA+AGG | - | chr4.1:56264315-56264334 | MS.gene63953:intron | 40.0% |
| ! | TGTCGATGGTGTTAAAGAGA+AGG | - | chr4.1:56263330-56263349 | MS.gene63953:intron | 40.0% |
| ! | TTGGTGACTTCTTGAATCTG+TGG | + | chr4.1:56261557-56261576 | None:intergenic | 40.0% |
| !! | AAACAAAGCTTTCGACTTGG+TGG | + | chr4.1:56264135-56264154 | None:intergenic | 40.0% |
| !! | AGGAGAATTTCTGGAATGAC+TGG | - | chr4.1:56262101-56262120 | MS.gene63953:intron | 40.0% |
| !! | ATGAAGGCACTAAACACACT+AGG | + | chr4.1:56264871-56264890 | None:intergenic | 40.0% |
| !! | CTTTTAAGGGAGTTATGCAC+CGG | - | chr4.1:56263617-56263636 | MS.gene63953:intron | 40.0% |
| !! | GCAGAAAAAATGGACTACGT+TGG | - | chr4.1:56261776-56261795 | MS.gene63953:intron | 40.0% |
| !! | TCCTTTAGGGGTTTTCTAAG+TGG | - | chr4.1:56265092-56265111 | MS.gene63953:intron | 40.0% |
| !! | TTGCTGTTTACTACTAGTGC+TGG | + | chr4.1:56261226-56261245 | None:intergenic | 40.0% |
| !!! | AAGACTTTTGCTGTTAAGCC+GGG | + | chr4.1:56265447-56265466 | None:intergenic | 40.0% |
| !!! | GAAGACTTTTGCTGTTAAGC+CGG | + | chr4.1:56265448-56265467 | None:intergenic | 40.0% |
| AAGTAGATTTGGACAGGGCA+AGG | - | chr4.1:56266361-56266380 | MS.gene63953:CDS | 45.0% | |
| ACTGACGTGCCTTCTTCAAA+TGG | - | chr4.1:56260835-56260854 | MS.gene63953:intron | 45.0% | |
| ACTGTAGCTCTTCAAGAGTC+TGG | + | chr4.1:56262952-56262971 | None:intergenic | 45.0% | |
| ACTTCACCCCAATCTATGAC+TGG | - | chr4.1:56262173-56262192 | MS.gene63953:intron | 45.0% | |
| ACTTCCCATTTCCCACTCTT+CGG | - | chr4.1:56261413-56261432 | MS.gene63953:intron | 45.0% | |
| AGAAGCCCCCAACAAATTGA+TGG | - | chr4.1:56265009-56265028 | MS.gene63953:intron | 45.0% | |
| AGCAAGAGGAGAAATACACG+TGG | - | chr4.1:56263302-56263321 | MS.gene63953:intron | 45.0% | |
| AGCTTTCTTCTCCTGCGTAA+AGG | + | chr4.1:56263263-56263282 | None:intergenic | 45.0% | |
| AGTCATGGAGGACAGTCAAA+TGG | - | chr4.1:56260805-56260824 | MS.gene63953:intron | 45.0% | |
| ATATAACCTTGGCAGCTGGA+AGG | - | chr4.1:56264180-56264199 | MS.gene63953:intron | 45.0% | |
| CCATCTGAACTCTTTGTAGG+GGG | + | chr4.1:56266396-56266415 | None:intergenic | 45.0% | |
| CTCTTCGGTTAAGAAGCCAA+AGG | - | chr4.1:56261428-56261447 | MS.gene63953:intron | 45.0% | |
| CTTAACCGAAGAGTGGGAAA+TGG | + | chr4.1:56261421-56261440 | None:intergenic | 45.0% | |
| CTTGAAGGGTCAAAGTGACA+AGG | - | chr4.1:56264300-56264319 | MS.gene63953:intron | 45.0% | |
| GATGTTCACCAAATCTCTGC+TGG | - | chr4.1:56266978-56266997 | MS.gene63953:CDS | 45.0% | |
| GCAAGAGGAGAAATACACGT+GGG | - | chr4.1:56263303-56263322 | MS.gene63953:intron | 45.0% | |
| GCAGCTAGTAGTTCCTTGAA+GGG | - | chr4.1:56264286-56264305 | MS.gene63953:intron | 45.0% | |
| GCATGAGGTTCCCATTGAAA+AGG | - | chr4.1:56266742-56266761 | MS.gene63953:CDS | 45.0% | |
| GCTTTCTTCTCCTGCGTAAA+GGG | + | chr4.1:56263262-56263281 | None:intergenic | 45.0% | |
| GGCCATGAACACATAATCGA+AGG | - | chr4.1:56266298-56266317 | MS.gene63953:CDS | 45.0% | |
| GTGTGAGATTAAGGCTAAGG+AGG | - | chr4.1:56261368-56261387 | MS.gene63953:intron | 45.0% | |
| GTTCAGAAAGAGCGGCAAAA+TGG | - | chr4.1:56261198-56261217 | MS.gene63953:intron | 45.0% | |
| GTTCTTGGTCTGTTTGCTCT+TGG | + | chr4.1:56261685-56261704 | None:intergenic | 45.0% | |
| TCACCAGGAATAGGACATTC+AGG | + | chr4.1:56264049-56264068 | None:intergenic | 45.0% | |
| TCACTTGTAGGCTGATCTGA+AGG | - | chr4.1:56266332-56266351 | MS.gene63953:CDS | 45.0% | |
| TCAGTACGGGAACAGGTATT+TGG | + | chr4.1:56265141-56265160 | None:intergenic | 45.0% | |
| TCAGTGGCAAGTTGTGATTC+AGG | + | chr4.1:56266906-56266925 | None:intergenic | 45.0% | |
| TGGCTTCTTAACCGAAGAGT+GGG | + | chr4.1:56261427-56261446 | None:intergenic | 45.0% | |
| TGGGCAATGGCTTAGAAGTT+TGG | + | chr4.1:56260861-56260880 | None:intergenic | 45.0% | |
| TGTACTATGTGGGTGAGTTG+TGG | - | chr4.1:56263160-56263179 | MS.gene63953:CDS | 45.0% | |
| TTATATCCTTCCAGCTGCCA+AGG | + | chr4.1:56264189-56264208 | None:intergenic | 45.0% | |
| TTGGCTTCTTAACCGAAGAG+TGG | + | chr4.1:56261428-56261447 | None:intergenic | 45.0% | |
| TTGTGATTCCGTGCACTCTT+CGG | - | chr4.1:56261284-56261303 | MS.gene63953:CDS | 45.0% | |
| ! | AGAAGCCAGCACCTTTTCAA+TGG | + | chr4.1:56266756-56266775 | None:intergenic | 45.0% |
| ! | AGGAAAAGTACGAGAAGGCT+AGG | - | chr4.1:56264320-56264339 | MS.gene63953:intron | 45.0% |
| ! | CTCTGCTGGCAAAATTTGCT+TGG | - | chr4.1:56266992-56267011 | MS.gene63953:CDS | 45.0% |
| ! | CTTCTTAACCGAAGAGTGCA+CGG | + | chr4.1:56261295-56261314 | None:intergenic | 45.0% |
| ! | GAAGCCAGCACCTTTTCAAT+GGG | + | chr4.1:56266755-56266774 | None:intergenic | 45.0% |
| ! | GGCAAAATTTGCTTGGGCAA+TGG | - | chr4.1:56266999-56267018 | MS.gene63953:CDS | 45.0% |
| ! | GGTTTTGCAATTCCTGCACA+AGG | + | chr4.1:56260889-56260908 | None:intergenic | 45.0% |
| ! | TCTGAGAGCTGGTAATGAGA+AGG | - | chr4.1:56264570-56264589 | MS.gene63953:intron | 45.0% |
| !! | AGGAAGAAGCGTTGAAGATC+TGG | + | chr4.1:56261742-56261761 | None:intergenic | 45.0% |
| !! | CTGGTGATGGGCAGAAAAAA+TGG | - | chr4.1:56261766-56261785 | MS.gene63953:intron | 45.0% |
| !! | CTTGTCACTTTGACCCTTCA+AGG | + | chr4.1:56264302-56264321 | None:intergenic | 45.0% |
| !! | TGGACTACGTTGGTTCACAA+TGG | - | chr4.1:56261786-56261805 | MS.gene63953:intron | 45.0% |
| !! | TTCTTCCTAGCTCTGGTGAT+GGG | - | chr4.1:56261754-56261773 | MS.gene63953:intron | 45.0% |
| ACCAGGCAACTGTAATCCTG+GGG | + | chr4.1:56266715-56266734 | None:intergenic | 50.0% | |
| AGATAAACTACCTCGACCCC+AGG | - | chr4.1:56266696-56266715 | MS.gene63953:CDS | 50.0% | |
| ATACCTTGGGATGCTCTCCA+CGG | + | chr4.1:56263833-56263852 | None:intergenic | 50.0% | |
| ATATCGCACCTCCTCTTGCT+CGG | + | chr4.1:56261886-56261905 | None:intergenic | 50.0% | |
| ATTTGCTTGGGCAATGGACG+TGG | - | chr4.1:56267005-56267024 | MS.gene63953:CDS | 50.0% | |
| CACCAGGCAACTGTAATCCT+GGG | + | chr4.1:56266716-56266735 | None:intergenic | 50.0% | |
| CATCTGAAGGAACTCATGCC+CGG | - | chr4.1:56265426-56265445 | MS.gene63953:intron | 50.0% | |
| CCAAAGGTCTCAGATTCAGC+TGG | - | chr4.1:56261444-56261463 | MS.gene63953:intron | 50.0% | |
| CCCCCTACAAAGAGTTCAGA+TGG | - | chr4.1:56266393-56266412 | MS.gene63953:CDS | 50.0% | |
| CGAGAAGGCTAGGTTGTTGA+AGG | - | chr4.1:56264330-56264349 | MS.gene63953:intron | 50.0% | |
| GACACACCCCAAAGAAAAGC+TGG | - | chr4.1:56265577-56265596 | MS.gene63953:CDS | 50.0% | |
| GATTTGGACAGGGCAAGGAA+AGG | - | chr4.1:56266366-56266385 | MS.gene63953:CDS | 50.0% | |
| GCACAAGGTTTCATGGGCAA+TGG | + | chr4.1:56260874-56260893 | None:intergenic | 50.0% | |
| GCTCTTGGTCTGTTTGCTCT+TGG | + | chr4.1:56261670-56261689 | None:intergenic | 50.0% | |
| GCTGAATCTGTGGCATTGCA+AGG | - | chr4.1:56263539-56263558 | MS.gene63953:intron | 50.0% | |
| GGCAAAATTGGGGAGTGGAA+GGG | - | chr4.1:56262918-56262937 | MS.gene63953:intron | 50.0% | |
| GGCAGCTAGTAGTTCCTTGA+AGG | - | chr4.1:56264285-56264304 | MS.gene63953:intron | 50.0% | |
| GGGGTCGAGGTAGTTTATCT+TGG | + | chr4.1:56266696-56266715 | None:intergenic | 50.0% | |
| GGGTGTGTCATGTGTGTGTT+GGG | + | chr4.1:56265566-56265585 | None:intergenic | 50.0% | |
| GGTGTGTCATGTGTGTGTTG+GGG | + | chr4.1:56265565-56265584 | None:intergenic | 50.0% | |
| GTCATGTGTGTGTTGGGGAA+GGG | + | chr4.1:56265560-56265579 | None:intergenic | 50.0% | |
| TCAACGCTTCTTCCTAGCTC+TGG | - | chr4.1:56261747-56261766 | MS.gene63953:intron | 50.0% | |
| TCATGTGTGTGTTGGGGAAG+GGG | + | chr4.1:56265559-56265578 | None:intergenic | 50.0% | |
| TGATTTGACTCCCGAGCAAG+AGG | - | chr4.1:56261872-56261891 | MS.gene63953:intron | 50.0% | |
| TGCATGGCAAAATTGGGGAG+TGG | - | chr4.1:56262913-56262932 | MS.gene63953:intron | 50.0% | |
| TGCTCGGGAGTCAAATCAAC+AGG | + | chr4.1:56261870-56261889 | None:intergenic | 50.0% | |
| TGGCAAAATTGGGGAGTGGA+AGG | - | chr4.1:56262917-56262936 | MS.gene63953:intron | 50.0% | |
| TGTCATGTGTGTGTTGGGGA+AGG | + | chr4.1:56265561-56265580 | None:intergenic | 50.0% | |
| TTACAGTTGCCTGGTGCAAG+AGG | - | chr4.1:56266720-56266739 | MS.gene63953:CDS | 50.0% | |
| TTGCCCATGAAACCTTGTGC+AGG | - | chr4.1:56260874-56260893 | MS.gene63953:intron | 50.0% | |
| ! | CCAGCTGAATCTGAGACCTT+TGG | + | chr4.1:56261447-56261466 | None:intergenic | 50.0% |
| ! | GCAGGAGAAGAAAGCTCTGA+AGG | - | chr4.1:56263267-56263286 | MS.gene63953:intron | 50.0% |
| ! | GCATTTTTACTCCATGGGGC+TGG | + | chr4.1:56261833-56261852 | None:intergenic | 50.0% |
| ! | GGTTCCCATTGAAAAGGTGC+TGG | - | chr4.1:56266748-56266767 | MS.gene63953:CDS | 50.0% |
| ! | TACACGTGGGCTATTGTCGA+TGG | - | chr4.1:56263316-56263335 | MS.gene63953:intron | 50.0% |
| ! | TTTACTCCATGGGGCTGGTA+AGG | + | chr4.1:56261828-56261847 | None:intergenic | 50.0% |
| !! | CTTCTTCCTAGCTCTGGTGA+TGG | - | chr4.1:56261753-56261772 | MS.gene63953:intron | 50.0% |
| !! | GATAAACTGGCTCTGAGAGC+TGG | - | chr4.1:56264559-56264578 | MS.gene63953:intron | 50.0% |
| !! | TTTCTGGAATGACTGGCGAG+AGG | - | chr4.1:56262108-56262127 | MS.gene63953:intron | 50.0% |
| AACCTCATGCCTCTTGCACC+AGG | + | chr4.1:56266732-56266751 | None:intergenic | 55.0% | |
| AATTGGGGAGTGGAAGGGAG+AGG | - | chr4.1:56262923-56262942 | MS.gene63953:intron | 55.0% | |
| ACCCCAGGATTACAGTTGCC+TGG | - | chr4.1:56266711-56266730 | MS.gene63953:CDS | 55.0% | |
| AGGTTGGGTATAGGGATGCG+TGG | + | chr4.1:56265815-56265834 | None:intergenic | 55.0% | |
| ATGTGTGTGTTGGGGAAGGG+GGG | + | chr4.1:56265557-56265576 | None:intergenic | 55.0% | |
| CAACTGTAATCCTGGGGTCG+AGG | + | chr4.1:56266709-56266728 | None:intergenic | 55.0% | |
| CATGTGTGTGTTGGGGAAGG+GGG | + | chr4.1:56265558-56265577 | None:intergenic | 55.0% | |
| CGCATCCCTATACCCAACCT+TGG | - | chr4.1:56265815-56265834 | MS.gene63953:intron | 55.0% | |
| GAACCTCCAGGATTGTTCCG+TGG | - | chr4.1:56263807-56263826 | MS.gene63953:intron | 55.0% | |
| GCACCAGGCAACTGTAATCC+TGG | + | chr4.1:56266717-56266736 | None:intergenic | 55.0% | |
| GGATGCGTGGATGGTGATCT+GGG | + | chr4.1:56265802-56265821 | None:intergenic | 55.0% | |
| GGGGTGTGTCATGTGTGTGT+TGG | + | chr4.1:56265567-56265586 | None:intergenic | 55.0% | |
| TATCGCACCTCCTCTTGCTC+GGG | + | chr4.1:56261885-56261904 | None:intergenic | 55.0% | |
| TGGGTATAGGGATGCGTGGA+TGG | + | chr4.1:56265811-56265830 | None:intergenic | 55.0% | |
| TTCTGCCCATCACCAGAGCT+AGG | + | chr4.1:56261762-56261781 | None:intergenic | 55.0% | |
| TTTGACTCCCGAGCAAGAGG+AGG | - | chr4.1:56261875-56261894 | MS.gene63953:intron | 55.0% | |
| !! | AATGACTGGCGAGAGGTGCT+AGG | - | chr4.1:56262115-56262134 | MS.gene63953:intron | 55.0% |
| GGGATGCGTGGATGGTGATC+TGG | + | chr4.1:56265803-56265822 | None:intergenic | 60.0% | |
| TGTGTGTGTTGGGGAAGGGG+GGG | + | chr4.1:56265556-56265575 | None:intergenic | 60.0% | |
| ! | ACTCCATGGGGCTGGTAAGG+AGG | + | chr4.1:56261825-56261844 | None:intergenic | 60.0% |
| ! | CATGGGGCTGGTAAGGAGGA+GGG | + | chr4.1:56261821-56261840 | None:intergenic | 60.0% |
| ! | TGCCTGGTGCAAGAGGCATG+AGG | - | chr4.1:56266727-56266746 | MS.gene63953:CDS | 60.0% |
| CCACGGCCACGGAACAATCC+TGG | + | chr4.1:56263816-56263835 | None:intergenic | 65.0% | |
| CCAGGATTGTTCCGTGGCCG+TGG | - | chr4.1:56263813-56263832 | MS.gene63953:intron | 65.0% | |
| CCTCCTCCTTACCAGCCCCA+TGG | - | chr4.1:56261819-56261838 | MS.gene63953:intron | 65.0% | |
| CGGCCACGGAACAATCCTGG+AGG | + | chr4.1:56263813-56263832 | None:intergenic | 65.0% | |
| TGGGATGCTCTCCACGGCCA+CGG | + | chr4.1:56263827-56263846 | None:intergenic | 65.0% | |
| TGTGTTGGGGAAGGGGGGGT+GGG | + | chr4.1:56265552-56265571 | None:intergenic | 65.0% | |
| ! | CCATGGGGCTGGTAAGGAGG+AGG | + | chr4.1:56261822-56261841 | None:intergenic | 65.0% |
| !! | TGGCCGTGGAGAGCATCCCA+AGG | - | chr4.1:56263827-56263846 | MS.gene63953:intron | 65.0% |
| GTGTGTTGGGGAAGGGGGGG+TGG | + | chr4.1:56265553-56265572 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 56260676 | 56267047 | 56260676 | ID=MS.gene63953 |
| chr4.1 | mRNA | 56260676 | 56267047 | 56260676 | ID=MS.gene63953.t1;Parent=MS.gene63953 |
| chr4.1 | exon | 56265827 | 56267047 | 56265827 | ID=MS.gene63953.t1.exon1;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56265827 | 56267047 | 56265827 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56265486 | 56265680 | 56265486 | ID=MS.gene63953.t1.exon2;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56265486 | 56265680 | 56265486 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56264372 | 56264452 | 56264372 | ID=MS.gene63953.t1.exon3;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56264372 | 56264452 | 56264372 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56263875 | 56263934 | 56263875 | ID=MS.gene63953.t1.exon4;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56263875 | 56263934 | 56263875 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56263652 | 56263746 | 56263652 | ID=MS.gene63953.t1.exon5;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56263652 | 56263746 | 56263652 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56263372 | 56263528 | 56263372 | ID=MS.gene63953.t1.exon6;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56263372 | 56263528 | 56263372 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56263132 | 56263257 | 56263132 | ID=MS.gene63953.t1.exon7;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56263132 | 56263257 | 56263132 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56262693 | 56262773 | 56262693 | ID=MS.gene63953.t1.exon8;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56262693 | 56262773 | 56262693 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56262429 | 56262519 | 56262429 | ID=MS.gene63953.t1.exon9;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56262429 | 56262519 | 56262429 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56262220 | 56262353 | 56262220 | ID=MS.gene63953.t1.exon10;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56262220 | 56262353 | 56262220 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56261689 | 56261757 | 56261689 | ID=MS.gene63953.t1.exon11;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56261689 | 56261757 | 56261689 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56261513 | 56261602 | 56261513 | ID=MS.gene63953.t1.exon12;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56261513 | 56261602 | 56261513 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56261278 | 56261381 | 56261278 | ID=MS.gene63953.t1.exon13;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56261278 | 56261381 | 56261278 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56260960 | 56261128 | 56260960 | ID=MS.gene63953.t1.exon14;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56260960 | 56261128 | 56260960 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| chr4.1 | exon | 56260676 | 56260744 | 56260676 | ID=MS.gene63953.t1.exon15;Parent=MS.gene63953.t1 |
| chr4.1 | CDS | 56260676 | 56260744 | 56260676 | ID=cds.MS.gene63953.t1;Parent=MS.gene63953.t1 |
| Gene Sequence |
| Protein sequence |
