Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91756.t1 | XP_013463523.1 | 98.6 | 1083 | 15 | 0 | 1 | 1083 | 1 | 1083 | 0.00E+00 | 1803.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91756.t1 | B5X0I6 | 78.8 | 869 | 182 | 2 | 1 | 868 | 1 | 868 | 0.0e+00 | 1396.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91756.t1 | A0A072V869 | 98.6 | 1083 | 15 | 0 | 1 | 1083 | 1 | 1083 | 0.0e+00 | 1803.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene91756 | 0.838703 | 2.46E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene91756 | 0.841422 | 4.80E-58 | -1.69E-46 |
| MS.gene049850 | MS.gene91756 | 0.830259 | 3.25E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene91756 | 0.812047 | 5.16E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene91756 | 0.810168 | 1.32E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene91756 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene91756 | 0.862897 | 3.66E-64 | -1.69E-46 |
| MS.gene052516 | MS.gene91756 | 0.803189 | 3.93E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene91756 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene91756 | 0.808991 | 2.36E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene91756 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene91756 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene91756 | 0.823736 | 1.18E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene91756 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene91756 | 0.861203 | 1.21E-63 | -1.69E-46 |
| MS.gene053296 | MS.gene91756 | 0.803599 | 3.23E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene91756 | 0.810657 | 1.03E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene91756 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene91756 | 0.81478 | 1.29E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene91756 | 0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene91756 | 0.83691 | 7.09E-57 | -1.69E-46 |
| MS.gene056366 | MS.gene91756 | 0.800911 | 1.15E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene91756 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene91756 | 0.820082 | 8.28E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene91756 | 0.833792 | 4.35E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene91756 | 0.853364 | 2.51E-61 | -1.69E-46 |
| MS.gene058009 | MS.gene91756 | 0.813888 | 2.04E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene91756 | 0.816157 | 6.39E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene91756 | 0.838341 | 3.05E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene91756 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene059570 | MS.gene91756 | 0.820255 | 7.55E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene91756 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene91756 | 0.80284 | 4.64E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91756 | MS.gene80691 | PPI |
| MS.gene91756 | MS.gene26972 | PPI |
| MS.gene91756 | MS.gene042595 | PPI |
| MS.gene061575 | MS.gene91756 | PPI |
| MS.gene91756 | MS.gene05026 | PPI |
| MS.gene91756 | MS.gene87979 | PPI |
| MS.gene91756 | MS.gene24268 | PPI |
| MS.gene80820 | MS.gene91756 | PPI |
| MS.gene91756 | MS.gene66970 | PPI |
| MS.gene27302 | MS.gene91756 | PPI |
| MS.gene91756 | MS.gene29637 | PPI |
| MS.gene91756 | MS.gene90689 | PPI |
| MS.gene20541 | MS.gene91756 | PPI |
| MS.gene91756 | MS.gene049685 | PPI |
| MS.gene91756 | MS.gene063673 | PPI |
| MS.gene91756 | MS.gene67685 | PPI |
| MS.gene91756 | MS.gene56730 | PPI |
| MS.gene91756 | MS.gene55174 | PPI |
| MS.gene91756 | MS.gene67503 | PPI |
| MS.gene91756 | MS.gene061960 | PPI |
| MS.gene91756 | MS.gene64820 | PPI |
| MS.gene008348 | MS.gene91756 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91756.t1 | MTR_2g041420 | 99.261 | 1083 | 8 | 0 | 1 | 1083 | 1 | 1083 | 0.0 | 2233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 238 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATGTCTCGCAATTATC+TGG | 0.164790 | 2.1:-49540870 | None:intergenic |
| CTCAAACTTTGAAAAGGTTT+TGG | 0.174983 | 2.1:+49540839 | MS.gene91756:CDS |
| AAGCTCTTGGTGATGGAATT+TGG | 0.184049 | 2.1:+49543926 | MS.gene91756:CDS |
| TGATCAGTTTCGCCAGATTT+TGG | 0.213195 | 2.1:+49535564 | MS.gene91756:CDS |
| GAATTTGTGTTTCCTTATTA+TGG | 0.240945 | 2.1:+49539885 | MS.gene91756:CDS |
| ATCATCGTTCATCTGAGTTT+GGG | 0.249473 | 2.1:-49549883 | None:intergenic |
| ATCTTTCAGCTGTTGGAATT+AGG | 0.262771 | 2.1:+49538878 | MS.gene91756:intron |
| ATTACAGGCATTTCTTGAAT+TGG | 0.268349 | 2.1:+49543515 | MS.gene91756:intron |
| AAAGGAGGAGCATTTCATTT+TGG | 0.273049 | 2.1:+49535868 | MS.gene91756:CDS |
| GACACTTGTCATTCACCTTC+AGG | 0.277390 | 2.1:-49545472 | None:intergenic |
| CACCCTCAAACTACACATTA+AGG | 0.280595 | 2.1:+49547462 | MS.gene91756:CDS |
| CATCATCGTTCATCTGAGTT+TGG | 0.283046 | 2.1:-49549884 | None:intergenic |
| AACAAGCTCCTCTTGATCTT+TGG | 0.287628 | 2.1:+49534444 | MS.gene91756:CDS |
| CTGAGTTTGGGGCTCCTCTC+TGG | 0.288118 | 2.1:-49549871 | None:intergenic |
| CTTGAGCAATTAAATGAATC+TGG | 0.290208 | 2.1:+49544108 | MS.gene91756:CDS |
| TAGCTTTCCTAATGAATTCA+TGG | 0.293410 | 2.1:-49542075 | None:intergenic |
| GGCAACACAATATTACAATA+AGG | 0.313065 | 2.1:+49535889 | MS.gene91756:CDS |
| AGAATTCTGAAGAGGAAGTT+AGG | 0.313979 | 2.1:+49534363 | MS.gene91756:CDS |
| ATTTAATTGCTCAAGTAATC+TGG | 0.318906 | 2.1:-49544100 | None:intergenic |
| GACAATGTTCCTGCTCTTCT+AGG | 0.320276 | 2.1:+49536300 | MS.gene91756:CDS |
| TCAACAGACTGTTCTCTTAC+AGG | 0.322492 | 2.1:-49550403 | None:intergenic |
| GGACTCGTTTGCCTCATTAT+TGG | 0.323538 | 2.1:-49550382 | None:intergenic |
| ATTGAATTACTCAATAATAT+TGG | 0.325278 | 2.1:+49543764 | MS.gene91756:CDS |
| ATCAGCAACTGACCATAATA+AGG | 0.347015 | 2.1:-49539897 | None:intergenic |
| GCTTCCAACCTACATATTCA+TGG | 0.349041 | 2.1:+49548310 | MS.gene91756:CDS |
| AGGAGAGTGATGGAGAAATC+AGG | 0.354875 | 2.1:+49550431 | MS.gene91756:CDS |
| CATTCTATTAAGCATTGAAT+TGG | 0.355555 | 2.1:+49544973 | MS.gene91756:CDS |
| TGAAGAGCAAAGAAAGATTC+AGG | 0.359712 | 2.1:+49548495 | MS.gene91756:CDS |
| GGCTGATATGATGGATGAAC+AGG | 0.360374 | 2.1:+49549818 | MS.gene91756:CDS |
| AAATGAGTAGCTTCTAGCTT+TGG | 0.363956 | 2.1:-49545807 | None:intergenic |
| GGTCTATGTCGCTACAAATT+AGG | 0.365036 | 2.1:+49538505 | MS.gene91756:CDS |
| GCATGAGGACGAATTGAAAA+TGG | 0.367183 | 2.1:+49548628 | MS.gene91756:CDS |
| TAGGTGAGAGCAACGGTTGC+AGG | 0.369321 | 2.1:+49548247 | MS.gene91756:intron |
| CATGGTGACCGTTACTTTCA+AGG | 0.372464 | 2.1:-49544035 | None:intergenic |
| GCCACTGTTCCGCTTCATAA+TGG | 0.372932 | 2.1:-49547400 | None:intergenic |
| ATACTGCACCCACTTACTTT+CGG | 0.378856 | 2.1:+49548366 | MS.gene91756:CDS |
| AAGAGAACAGTCTGTTGATA+TGG | 0.382003 | 2.1:+49550408 | MS.gene91756:CDS |
| AGATATGCATCAATGTAGTC+TGG | 0.385929 | 2.1:-49544917 | None:intergenic |
| GCAAATCATTTCTTCTTCAC+TGG | 0.386727 | 2.1:+49538970 | MS.gene91756:CDS |
| TTACAGGCATTTCTTGAATT+GGG | 0.393382 | 2.1:+49543516 | MS.gene91756:intron |
| CCACTGTTCCGCTTCATAAT+GGG | 0.394229 | 2.1:-49547399 | None:intergenic |
| TCTTGTTGCACTTGCAATCA+TGG | 0.396500 | 2.1:+49538684 | MS.gene91756:CDS |
| AAAGCTAGAAGCTACTCATT+TGG | 0.397882 | 2.1:+49545809 | MS.gene91756:CDS |
| AACACGCTCAAATGCCTGTC+GGG | 0.399209 | 2.1:-49538542 | None:intergenic |
| TGATTCGCTTGAGTTGTATA+AGG | 0.399501 | 2.1:+49537630 | MS.gene91756:CDS |
| GCATTTAAGATCGTGTTAGA+TGG | 0.401293 | 2.1:+49536270 | MS.gene91756:CDS |
| TACTTCTACACTTCAATTCA+AGG | 0.404433 | 2.1:+49543993 | MS.gene91756:CDS |
| CACGGTCTTCTCGCATTAGC+TGG | 0.405913 | 2.1:+49549918 | MS.gene91756:CDS |
| TGTGATATGAATAGGGAAAC+TGG | 0.409251 | 2.1:+49545748 | MS.gene91756:intron |
| ATATCGCCTAATCTTGTTCA+AGG | 0.410545 | 2.1:+49544146 | MS.gene91756:CDS |
| TGTAGAAGTAGCAGCATCAA+TGG | 0.412103 | 2.1:-49543980 | None:intergenic |
| AATAAGGAAACACAAATTCA+TGG | 0.416035 | 2.1:-49539881 | None:intergenic |
| GAGACAGGAACTTGCTCGTC+AGG | 0.417270 | 2.1:+49548441 | MS.gene91756:CDS |
| TAATAAGAATGAGACTTTGT+TGG | 0.418797 | 2.1:-49539051 | None:intergenic |
| TGCCTGCCTCCGCCTGCTAA+TGG | 0.420567 | 2.1:-49550335 | None:intergenic |
| TTATCCAAACGTCAGGCATC+TGG | 0.420793 | 2.1:-49547153 | None:intergenic |
| AGCAAAGGGTGAAGTTGAAC+AGG | 0.420821 | 2.1:+49536239 | MS.gene91756:CDS |
| TAGATCCTTCCTCCAAAATC+TGG | 0.421174 | 2.1:-49535576 | None:intergenic |
| TGCACTCTCAAACTTTGAAA+AGG | 0.423467 | 2.1:+49540833 | MS.gene91756:CDS |
| TTGTCCAGATGCCTGACGTT+TGG | 0.425536 | 2.1:+49547149 | MS.gene91756:CDS |
| CCCAGCATAGATAATGCATT+TGG | 0.427360 | 2.1:-49545494 | None:intergenic |
| ACAAGGGCCATGAATTCATT+AGG | 0.428291 | 2.1:+49542068 | MS.gene91756:CDS |
| CCTCCGCCTGCTAATGGTTG+AGG | 0.428569 | 2.1:-49550329 | None:intergenic |
| CTCACAGCTGCAGGGCAATT+CGG | 0.430397 | 2.1:-49538472 | None:intergenic |
| AAGCATCACCTGGGCATCAC+GGG | 0.431312 | 2.1:-49542110 | None:intergenic |
| AATGAATTCATGGCCCTTGT+CGG | 0.434961 | 2.1:-49542065 | None:intergenic |
| GTTTGAAAGGGGAGAATTTG+AGG | 0.435099 | 2.1:+49543796 | MS.gene91756:CDS |
| TCCTCTTCAGAATTCTGAAC+CGG | 0.442767 | 2.1:-49534356 | None:intergenic |
| CCCTCTACTTGGGTTGGAAA+AGG | 0.447245 | 2.1:+49535935 | MS.gene91756:CDS |
| ATTGAAAATGGTGCAACAAC+AGG | 0.449547 | 2.1:+49548640 | MS.gene91756:CDS |
| TTCAGCATCAACCCTTCAAA+AGG | 0.450465 | 2.1:+49547514 | MS.gene91756:CDS |
| CAAATTAGGTCAATTTGAAA+AGG | 0.454791 | 2.1:+49538519 | MS.gene91756:CDS |
| AAACCTTAATGTGTAGTTTG+AGG | 0.456515 | 2.1:-49547465 | None:intergenic |
| AACCTTAATGTGTAGTTTGA+GGG | 0.457259 | 2.1:-49547464 | None:intergenic |
| AACCATTAGCAGGCGGAGGC+AGG | 0.459253 | 2.1:+49550333 | MS.gene91756:CDS |
| GGAACTACTTTGCTGCAGTT+AGG | 0.460007 | 2.1:+49545769 | MS.gene91756:CDS |
| AGACTTTGTTGGACCATGAT+TGG | 0.460216 | 2.1:-49539040 | None:intergenic |
| ACACTTGTCATTCACCTTCA+GGG | 0.464528 | 2.1:-49545471 | None:intergenic |
| GGAGAGTGATGGAGAAATCA+GGG | 0.464663 | 2.1:+49550432 | MS.gene91756:CDS |
| GGACAAGTACAGATTAAGTT+GGG | 0.467799 | 2.1:+49540798 | MS.gene91756:CDS |
| TATGATGGATGAACAGGAAA+TGG | 0.467895 | 2.1:+49549824 | MS.gene91756:CDS |
| GCATTAGCTGTTACCAATCA+TGG | 0.468530 | 2.1:+49539027 | MS.gene91756:CDS |
| TGCCCTGCAGCTGTGAGACT+TGG | 0.468768 | 2.1:+49538478 | MS.gene91756:CDS |
| CTCCGCCTGCTAATGGTTGA+GGG | 0.469937 | 2.1:-49550328 | None:intergenic |
| GCCTGACGTTTGGATAAATC+TGG | 0.474134 | 2.1:+49547159 | MS.gene91756:CDS |
| TCCAAATGCATTATCTATGC+TGG | 0.474432 | 2.1:+49545493 | MS.gene91756:CDS |
| GTCCGACACAGGAGCTGCAC+TGG | 0.475287 | 2.1:+49543554 | MS.gene91756:CDS |
| TTGGTGTCCTTCAGTTTGAA+AGG | 0.476012 | 2.1:+49543783 | MS.gene91756:CDS |
| TTTAAGGAAGCTCTTGGTGA+TGG | 0.479020 | 2.1:+49543919 | MS.gene91756:CDS |
| AGAGACAAAACAAAGAGAAA+AGG | 0.480273 | 2.1:+49535850 | MS.gene91756:CDS |
| AGGTGGAAAGAGGAGGAAGA+AGG | 0.482244 | 2.1:+49549755 | MS.gene91756:CDS |
| TTCAAAAGATATCTTTGCAC+AGG | 0.482825 | 2.1:+49547013 | MS.gene91756:CDS |
| ACATGCACGAGCCCTCTACT+TGG | 0.483852 | 2.1:+49535924 | MS.gene91756:CDS |
| AATGGCATCGGTTTATATAC+CGG | 0.485711 | 2.1:+49534337 | None:intergenic |
| GGCTGAGGAAGCACGGCGCA+AGG | 0.486164 | 2.1:+49548471 | MS.gene91756:CDS |
| TGGTGTCCTTCAGTTTGAAA+GGG | 0.486387 | 2.1:+49543784 | MS.gene91756:CDS |
| CAGTGGCATCACTCGCTCTC+CGG | 0.487534 | 2.1:-49545565 | None:intergenic |
| GGGACAAGTACAGATTAAGT+TGG | 0.488557 | 2.1:+49540797 | MS.gene91756:CDS |
| ATTCCAAGTCTCACAGCTGC+AGG | 0.489740 | 2.1:-49538481 | None:intergenic |
| ACTTGCTCGTCAGGTTGCAT+TGG | 0.490048 | 2.1:+49548450 | MS.gene91756:CDS |
| AGAGAAGAAAAGGTGGAAAG+AGG | 0.490094 | 2.1:+49549745 | MS.gene91756:CDS |
| ATATTATTGAGTAATTCAAT+TGG | 0.491591 | 2.1:-49543761 | None:intergenic |
| AGAAACAGAGGCTGATATGA+TGG | 0.492446 | 2.1:+49549809 | MS.gene91756:CDS |
| GACCTCCCTCAACCATTAGC+AGG | 0.493021 | 2.1:+49550323 | MS.gene91756:CDS |
| TTGCTATCTTAAATGCCCTC+GGG | 0.495001 | 2.1:+49535801 | MS.gene91756:CDS |
| CACGAGCCCTCTACTTGGGT+TGG | 0.498622 | 2.1:+49535929 | MS.gene91756:CDS |
| TACACATTAAGGTTTGATGC+AGG | 0.502650 | 2.1:+49547473 | MS.gene91756:CDS |
| AGAAGCTACTCATTTGGAAA+AGG | 0.503503 | 2.1:+49545815 | MS.gene91756:CDS |
| ATAAGGAAACACAAATTCAT+GGG | 0.505012 | 2.1:-49539880 | None:intergenic |
| ATTCTCCCCTTTCAAACTGA+AGG | 0.505407 | 2.1:-49543790 | None:intergenic |
| GCAGCTGTGAGACTTGGAAT+AGG | 0.507108 | 2.1:+49538484 | MS.gene91756:CDS |
| TCTACAGAGAGCCATCCATT+TGG | 0.507314 | 2.1:+49547439 | MS.gene91756:CDS |
| GCCAGATTTATCCAAACGTC+AGG | 0.507859 | 2.1:-49547160 | None:intergenic |
| CTTCATAATGGGTACGAGCC+AGG | 0.509207 | 2.1:-49547388 | None:intergenic |
| ACAACAAATACGGCAGAGAC+AGG | 0.509727 | 2.1:+49548426 | MS.gene91756:CDS |
| GAATTCTGAAGAGGAAGTTA+GGG | 0.511282 | 2.1:+49534364 | MS.gene91756:CDS |
| CACATTAAGGTTTGATGCAG+GGG | 0.511303 | 2.1:+49547475 | MS.gene91756:CDS |
| TCAATTTGAAAAGGCCCGAC+AGG | 0.516709 | 2.1:+49538528 | MS.gene91756:CDS |
| AATTGATCCCCGTGATGCCC+AGG | 0.519992 | 2.1:+49542102 | MS.gene91756:CDS |
| GAAGAAAAGGTGGAAAGAGG+AGG | 0.522338 | 2.1:+49549748 | MS.gene91756:CDS |
| CATCAAATCCATGAATATGT+AGG | 0.524899 | 2.1:-49548318 | None:intergenic |
| TGTTCCTGCTCTTCTAGGCC+AGG | 0.525188 | 2.1:+49536305 | MS.gene91756:CDS |
| ATTGCTCAAGTAATCTGGCC+AGG | 0.525556 | 2.1:-49544095 | None:intergenic |
| CATTATTGGCTGATCGTCGT+CGG | 0.525611 | 2.1:-49550368 | None:intergenic |
| TTGAGAGCCATTGCACAGTA+CGG | 0.527044 | 2.1:-49538940 | None:intergenic |
| TCAATGTCTCGCAATTATCT+GGG | 0.528058 | 2.1:-49540869 | None:intergenic |
| CACATTCAAAACGGAGGGAA+AGG | 0.531936 | 2.1:+49549688 | MS.gene91756:CDS |
| TATACCTGGCCTAGAAGAGC+AGG | 0.532144 | 2.1:-49536309 | None:intergenic |
| GACAAAACAAAGAGAAAAGG+AGG | 0.534666 | 2.1:+49535853 | MS.gene91756:CDS |
| TCAGCTGTTGGAATTAGGAA+AGG | 0.536484 | 2.1:+49538883 | MS.gene91756:intron |
| AGCTAATGCGAGAAGACCGT+GGG | 0.536949 | 2.1:-49549916 | None:intergenic |
| GGGGCTTACTATAGCTACCT+TGG | 0.537951 | 2.1:+49535821 | MS.gene91756:CDS |
| GAGCGAGTGATGCCACTGAC+GGG | 0.541714 | 2.1:+49545570 | MS.gene91756:CDS |
| TGAGAGCCATTGCACAGTAC+GGG | 0.544473 | 2.1:-49538939 | None:intergenic |
| AGAATATCAGAAGCATCCCT+TGG | 0.546018 | 2.1:-49534404 | None:intergenic |
| ATTATCTATGCTGGGTGAGT+TGG | 0.549414 | 2.1:+49545502 | MS.gene91756:CDS |
| GAGAAGAGACATGAAGATGA+TGG | 0.549944 | 2.1:+49550457 | MS.gene91756:CDS |
| TTGGAGGAAGGATCTAGTCC+AGG | 0.550403 | 2.1:+49535583 | MS.gene91756:CDS |
| AAATCCATGAATATGTAGGT+TGG | 0.551401 | 2.1:-49548314 | None:intergenic |
| GCAGAGGGAGTACTTCAAGC+AGG | 0.552092 | 2.1:+49535534 | MS.gene91756:intron |
| TCGTCAGGTTGCATTGGCTG+AGG | 0.552322 | 2.1:+49548456 | MS.gene91756:CDS |
| TTAGGTTAATGATGCCCTGA+AGG | 0.552937 | 2.1:+49545457 | MS.gene91756:intron |
| TGAAGGCAAAAGAAACTCTC+CGG | 0.554640 | 2.1:+49545546 | MS.gene91756:CDS |
| ATTTGCATTTCTAGGAACAA+TGG | 0.555331 | 2.1:+49549655 | MS.gene91756:intron |
| CTCACAAATACTTCTATACC+TGG | 0.556946 | 2.1:+49547370 | MS.gene91756:CDS |
| ACGACGATCAGCCAATAATG+AGG | 0.557882 | 2.1:+49550371 | MS.gene91756:CDS |
| AGTCCCACCGTCTTCATCAT+CGG | 0.558633 | 2.1:-49549712 | None:intergenic |
| AACGTGAAGAACAACAAATA+CGG | 0.559581 | 2.1:+49548416 | MS.gene91756:CDS |
| ATTGCTATCTTAAATGCCCT+CGG | 0.560013 | 2.1:+49535800 | MS.gene91756:CDS |
| GAAGCATCACCTGGGCATCA+CGG | 0.560742 | 2.1:-49542111 | None:intergenic |
| AATATTACAATAAGGCATCA+AGG | 0.561837 | 2.1:+49535897 | MS.gene91756:CDS |
| TTGCATTGGCTGAGGAAGCA+CGG | 0.565516 | 2.1:+49548464 | MS.gene91756:CDS |
| GCTAATTTATATGCTGCCAA+TGG | 0.567464 | 2.1:+49546951 | MS.gene91756:CDS |
| ACACATTAAGGTTTGATGCA+GGG | 0.567536 | 2.1:+49547474 | MS.gene91756:CDS |
| TTCTGATGCTGATGATGAGC+CGG | 0.568193 | 2.1:+49549950 | MS.gene91756:CDS |
| AAGAAGATTGACACTCATGT+TGG | 0.569285 | 2.1:+49548343 | MS.gene91756:CDS |
| AGAAGCTTCTGACCTTGCTA+TGG | 0.569338 | 2.1:-49539092 | None:intergenic |
| GCATACATATATGTTCAGCT+TGG | 0.569437 | 2.1:+49542037 | MS.gene91756:CDS |
| ATGGACTTGCGCTCTAACGA+AGG | 0.569767 | 2.1:+49538703 | MS.gene91756:CDS |
| GTCATACCTTGAACAAGATT+AGG | 0.570382 | 2.1:-49544152 | None:intergenic |
| TAAAGCTGGGGTGTATTACA+TGG | 0.571200 | 2.1:+49539833 | MS.gene91756:CDS |
| AGGTGAGAGCAACGGTTGCA+GGG | 0.571421 | 2.1:+49548248 | MS.gene91756:intron |
| TACTCATTTGGAAAAGGCGA+AGG | 0.575272 | 2.1:+49545821 | MS.gene91756:CDS |
| GTATTACATGGCATCTGTCA+AGG | 0.576232 | 2.1:+49539845 | MS.gene91756:CDS |
| TTGGCTTTCTTTCTTTAGCG+AGG | 0.577716 | 2.1:+49543945 | MS.gene91756:CDS |
| TCATCGTTCATCTGAGTTTG+GGG | 0.579284 | 2.1:-49549882 | None:intergenic |
| GATATGCATCAATGTAGTCT+GGG | 0.579999 | 2.1:-49544916 | None:intergenic |
| TCTCGCATTAGCTGGACTTG+AGG | 0.580974 | 2.1:+49549926 | MS.gene91756:CDS |
| TTAATCTCGATCAACTTCCA+AGG | 0.583866 | 2.1:+49534387 | MS.gene91756:CDS |
| ATATGAGTCCTTCCCGTCAG+TGG | 0.585495 | 2.1:-49545582 | None:intergenic |
| AGAGCAGCACACATTCAAAA+CGG | 0.586172 | 2.1:+49549679 | MS.gene91756:CDS |
| GAGGCTAGCGGCTATTGCAA+AGG | 0.587953 | 2.1:+49544940 | MS.gene91756:CDS |
| CCTCAACCATTAGCAGGCGG+AGG | 0.588394 | 2.1:+49550329 | MS.gene91756:CDS |
| TGTAGTTTGAGGGTGCCAAA+TGG | 0.590613 | 2.1:-49547454 | None:intergenic |
| TGATCTTTGGCTCATTATCG+CGG | 0.592084 | 2.1:+49534457 | MS.gene91756:CDS |
| GAAAATGGTGCAACAACAGG+AGG | 0.592190 | 2.1:+49548643 | MS.gene91756:CDS |
| TAGCGGCTATTGCAAAGGCT+CGG | 0.592892 | 2.1:+49544945 | MS.gene91756:CDS |
| AGAACAGTCTGTTGATATGG+AGG | 0.593278 | 2.1:+49550411 | MS.gene91756:CDS |
| CCCATTATGAAGCGGAACAG+TGG | 0.594005 | 2.1:+49547399 | MS.gene91756:CDS |
| GTCACCATGTTGAAGTACCA+TGG | 0.596528 | 2.1:+49544049 | MS.gene91756:CDS |
| TGTTGGAATTAGGAAAGGAA+TGG | 0.596800 | 2.1:+49538888 | MS.gene91756:CDS |
| AGCACGCTCTTACCATAGCA+AGG | 0.597396 | 2.1:+49539080 | MS.gene91756:CDS |
| AGAGCGAGTGATGCCACTGA+CGG | 0.599695 | 2.1:+49545569 | MS.gene91756:CDS |
| GAGTGATGCCACTGACGGGA+AGG | 0.603327 | 2.1:+49545574 | MS.gene91756:CDS |
| CCAAATGCATTATCTATGCT+GGG | 0.603589 | 2.1:+49545494 | MS.gene91756:CDS |
| CATGCACGAGCCCTCTACTT+GGG | 0.603881 | 2.1:+49535925 | MS.gene91756:CDS |
| ATCCAGTGCAGCTCCTGTGT+CGG | 0.604801 | 2.1:-49543556 | None:intergenic |
| GGTGTCCTTCAGTTTGAAAG+GGG | 0.610316 | 2.1:+49543785 | MS.gene91756:CDS |
| TTCCAAGTCTCACAGCTGCA+GGG | 0.614463 | 2.1:-49538480 | None:intergenic |
| CAGCACACATTCAAAACGGA+GGG | 0.615167 | 2.1:+49549683 | MS.gene91756:CDS |
| GTTGATATGGAGGAGAGTGA+TGG | 0.616014 | 2.1:+49550421 | MS.gene91756:CDS |
| GCTATACCCGTACTGTGCAA+TGG | 0.616669 | 2.1:+49538933 | MS.gene91756:CDS |
| GATGGATGAACAGGAAATGG+AGG | 0.616780 | 2.1:+49549827 | MS.gene91756:CDS |
| GGCTCGTACCCATTATGAAG+CGG | 0.617210 | 2.1:+49547391 | MS.gene91756:CDS |
| GAAAGGTCCGATGATGAAGA+CGG | 0.621871 | 2.1:+49549705 | MS.gene91756:CDS |
| TCACCATGTTGAAGTACCAT+GGG | 0.623369 | 2.1:+49544050 | MS.gene91756:CDS |
| TCAGCTTGGTCAAACCGACA+AGG | 0.623453 | 2.1:+49542051 | MS.gene91756:CDS |
| TAATCTCGATCAACTTCCAA+GGG | 0.624605 | 2.1:+49534388 | MS.gene91756:CDS |
| TTTCACGACCTTGAAAGTAA+CGG | 0.625299 | 2.1:+49544027 | MS.gene91756:CDS |
| ATAATGAGCCAAAGATCAAG+AGG | 0.626038 | 2.1:-49534452 | None:intergenic |
| GTTTGAGGGTGCCAAATGGA+TGG | 0.627665 | 2.1:-49547450 | None:intergenic |
| ACTGAATCGATCAATGGCAT+CGG | 0.630418 | 2.1:+49534325 | None:intergenic |
| ACCGGTTCAGAATTCTGAAG+AGG | 0.631734 | 2.1:+49534355 | MS.gene91756:CDS |
| CAGAGGGAGTACTTCAAGCA+GGG | 0.632688 | 2.1:+49535535 | MS.gene91756:intron |
| TGCTATCTTAAATGCCCTCG+GGG | 0.634283 | 2.1:+49535802 | MS.gene91756:CDS |
| TGCAGTATCAGAATTGCTTG+CGG | 0.640197 | 2.1:+49547327 | MS.gene91756:intron |
| GGTCCGATGATGAAGACGGT+GGG | 0.641442 | 2.1:+49549709 | MS.gene91756:CDS |
| AAACACGCTCAAATGCCTGT+CGG | 0.642330 | 2.1:-49538543 | None:intergenic |
| ATATGCTGCCAATGGTGCTG+CGG | 0.642461 | 2.1:+49546959 | MS.gene91756:CDS |
| AGCATCACCTGGGCATCACG+GGG | 0.646234 | 2.1:-49542109 | None:intergenic |
| CAGCTTGGTCAAACCGACAA+GGG | 0.647963 | 2.1:+49542052 | MS.gene91756:CDS |
| GCGAATCAGAAAATCTTCCA+CGG | 0.648266 | 2.1:-49537615 | None:intergenic |
| CGCCTGCTAATGGTTGAGGG+AGG | 0.651946 | 2.1:-49550325 | None:intergenic |
| CAGCTAATGCGAGAAGACCG+TGG | 0.652542 | 2.1:-49549917 | None:intergenic |
| AGGTCCGATGATGAAGACGG+TGG | 0.655582 | 2.1:+49549708 | MS.gene91756:CDS |
| AGTCACAGTACTCTTTAACC+TGG | 0.656054 | 2.1:+49544077 | MS.gene91756:CDS |
| CTCCCTCAACCATTAGCAGG+CGG | 0.656807 | 2.1:+49550326 | MS.gene91756:CDS |
| AACTCAGATGAACGATGATG+AGG | 0.658421 | 2.1:+49549887 | MS.gene91756:CDS |
| TATCCCATGGTACTTCAACA+TGG | 0.661108 | 2.1:-49544053 | None:intergenic |
| TGATGCATATCTGAGGCTAG+CGG | 0.669165 | 2.1:+49544928 | MS.gene91756:CDS |
| TGAAGATGATGGCAGTGATG+AGG | 0.670943 | 2.1:+49550468 | MS.gene91756:CDS |
| TAAGGAAACACAAATTCATG+GGG | 0.672819 | 2.1:-49539879 | None:intergenic |
| GCAGCACACATTCAAAACGG+AGG | 0.672994 | 2.1:+49549682 | MS.gene91756:CDS |
| ACTACATTGATGCATATCTG+AGG | 0.679632 | 2.1:+49544921 | MS.gene91756:CDS |
| CAATGACACAGAAGAAACAG+AGG | 0.683420 | 2.1:+49549797 | MS.gene91756:CDS |
| ATGCTGATATTAGATACGAG+AGG | 0.684728 | 2.1:+49535777 | MS.gene91756:CDS |
| CAGGTTCAAGAAGCTGCCAG+TGG | 0.687409 | 2.1:+49547118 | MS.gene91756:intron |
| AGTACTGTGACTTTATCCCA+TGG | 0.687951 | 2.1:-49544066 | None:intergenic |
| GATGGACAGAAGAAAGCATG+AGG | 0.688027 | 2.1:+49548613 | MS.gene91756:intron |
| GCATGTGTTGAGTTCAACCG+TGG | 0.688407 | 2.1:+49537598 | MS.gene91756:CDS |
| GTAGCTATAGTAAGCCCCGA+GGG | 0.688854 | 2.1:-49535816 | None:intergenic |
| TAAATGTTAGGTGAGAGCAA+CGG | 0.691545 | 2.1:+49548240 | MS.gene91756:intron |
| CAACCCTTCAAAAGGCAAAG+CGG | 0.696853 | 2.1:+49547522 | MS.gene91756:CDS |
| GCTTGATCCAGAAAATGTCG+AGG | 0.707537 | 2.1:+49538660 | MS.gene91756:intron |
| GATGATGAGGAAAATCCCCA+CGG | 0.710699 | 2.1:+49549900 | MS.gene91756:CDS |
| TGTTGACATGAACTCCAGAG+AGG | 0.734294 | 2.1:+49549857 | MS.gene91756:CDS |
| GGTAGCTATAGTAAGCCCCG+AGG | 0.773062 | 2.1:-49535817 | None:intergenic |
| GCTAATGCGAGAAGACCGTG+GGG | 0.786540 | 2.1:-49549915 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 49534338 | 49550498 | 49534338 | ID=MS.gene91756 |
| chr2.1 | mRNA | 49534338 | 49550498 | 49534338 | ID=MS.gene91756.t1;Parent=MS.gene91756 |
| chr2.1 | exon | 49534338 | 49534478 | 49534338 | ID=MS.gene91756.t1.exon1;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49534338 | 49534478 | 49534338 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49535538 | 49535604 | 49535538 | ID=MS.gene91756.t1.exon2;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49535538 | 49535604 | 49535538 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49535762 | 49535956 | 49535762 | ID=MS.gene91756.t1.exon3;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49535762 | 49535956 | 49535762 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49536226 | 49536326 | 49536226 | ID=MS.gene91756.t1.exon4;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49536226 | 49536326 | 49536226 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49537598 | 49537651 | 49537598 | ID=MS.gene91756.t1.exon5;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49537598 | 49537651 | 49537598 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49538454 | 49538570 | 49538454 | ID=MS.gene91756.t1.exon6;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49538454 | 49538570 | 49538454 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49538661 | 49538724 | 49538661 | ID=MS.gene91756.t1.exon7;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49538661 | 49538724 | 49538661 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49538887 | 49539101 | 49538887 | ID=MS.gene91756.t1.exon8;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49538887 | 49539101 | 49538887 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49539822 | 49539906 | 49539822 | ID=MS.gene91756.t1.exon9;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49539822 | 49539906 | 49539822 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49540793 | 49540893 | 49540793 | ID=MS.gene91756.t1.exon10;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49540793 | 49540893 | 49540793 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49542031 | 49542123 | 49542031 | ID=MS.gene91756.t1.exon11;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49542031 | 49542123 | 49542031 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49543522 | 49543590 | 49543522 | ID=MS.gene91756.t1.exon12;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49543522 | 49543590 | 49543522 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49543725 | 49543817 | 49543725 | ID=MS.gene91756.t1.exon13;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49543725 | 49543817 | 49543725 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49543904 | 49544167 | 49543904 | ID=MS.gene91756.t1.exon14;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49543904 | 49544167 | 49543904 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49544914 | 49544994 | 49544914 | ID=MS.gene91756.t1.exon15;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49544914 | 49544994 | 49544914 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49545461 | 49545619 | 49545461 | ID=MS.gene91756.t1.exon16;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49545461 | 49545619 | 49545461 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49545762 | 49545857 | 49545762 | ID=MS.gene91756.t1.exon17;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49545762 | 49545857 | 49545762 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49546933 | 49547034 | 49546933 | ID=MS.gene91756.t1.exon18;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49546933 | 49547034 | 49546933 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49547121 | 49547228 | 49547121 | ID=MS.gene91756.t1.exon19;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49547121 | 49547228 | 49547121 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49547332 | 49547556 | 49547332 | ID=MS.gene91756.t1.exon20;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49547332 | 49547556 | 49547332 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49548250 | 49548516 | 49548250 | ID=MS.gene91756.t1.exon21;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49548250 | 49548516 | 49548250 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49548614 | 49548685 | 49548614 | ID=MS.gene91756.t1.exon22;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49548614 | 49548685 | 49548614 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49549669 | 49549971 | 49549669 | ID=MS.gene91756.t1.exon23;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49549669 | 49549971 | 49549669 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| chr2.1 | exon | 49550319 | 49550498 | 49550319 | ID=MS.gene91756.t1.exon24;Parent=MS.gene91756.t1 |
| chr2.1 | CDS | 49550319 | 49550498 | 49550319 | ID=cds.MS.gene91756.t1;Parent=MS.gene91756.t1 |
| Gene Sequence |
| Protein sequence |
