Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99525.t1 | XP_013466945.1 | 94.2 | 902 | 49 | 1 | 1 | 902 | 1 | 899 | 0.00E+00 | 1471.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99525.t1 | Q9FJ79 | 68.4 | 686 | 184 | 7 | 243 | 902 | 233 | 911 | 6.3e-248 | 858.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99525.t1 | A0A072VH94 | 94.2 | 902 | 49 | 1 | 1 | 902 | 1 | 899 | 0.0e+00 | 1471.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene99525 | 0.834677 | 2.61E-56 | -1.69E-46 |
| MS.gene049283 | MS.gene99525 | 0.820412 | 6.96E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene99525 | 0.826948 | 2.05E-54 | -1.69E-46 |
| MS.gene049801 | MS.gene99525 | 0.839321 | 1.70E-57 | -1.69E-46 |
| MS.gene049983 | MS.gene99525 | 0.844774 | 6.14E-59 | -1.69E-46 |
| MS.gene050084 | MS.gene99525 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene050085 | MS.gene99525 | 0.83836 | 3.01E-57 | -1.69E-46 |
| MS.gene050114 | MS.gene99525 | 0.841656 | 4.16E-58 | -1.69E-46 |
| MS.gene050116 | MS.gene99525 | 0.813668 | 2.28E-51 | -1.69E-46 |
| MS.gene050213 | MS.gene99525 | 0.802035 | 6.79E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene99525 | 0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene99525 | 0.809783 | 1.60E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene99525 | 0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene99525 | 0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene99525 | 0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene99525 | 0.868234 | 7.60E-66 | -1.69E-46 |
| MS.gene050737 | MS.gene99525 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene99525 | 0.851819 | 6.92E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene99525 | 0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene99525 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene051184 | MS.gene99525 | 0.834982 | 2.19E-56 | -1.69E-46 |
| MS.gene051209 | MS.gene99525 | 0.816434 | 5.54E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene99525 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene051541 | MS.gene99525 | 0.820123 | 8.10E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene99525 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene051831 | MS.gene99525 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene99525 | 0.831468 | 1.64E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene99525 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene99525 | -0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene99525 | 0.836645 | 8.29E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene99525 | 0.826194 | 3.10E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene99525 | 0.850174 | 2.01E-60 | -1.69E-46 |
| MS.gene052463 | MS.gene99525 | 0.80161 | 8.30E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene99525 | 0.85479 | 9.74E-62 | -1.69E-46 |
| MS.gene052674 | MS.gene99525 | 0.800578 | 1.35E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene99525 | 0.801238 | 9.90E-49 | -1.69E-46 |
| MS.gene052776 | MS.gene99525 | 0.823889 | 1.09E-53 | -1.69E-46 |
| MS.gene052994 | MS.gene99525 | 0.809124 | 2.21E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene99525 | 0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene99525 | 0.831521 | 1.59E-55 | -1.69E-46 |
| MS.gene053381 | MS.gene99525 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene053486 | MS.gene99525 | 0.81623 | 6.15E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene99525 | 0.832635 | 8.45E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene99525 | 0.83081 | 2.38E-55 | -1.69E-46 |
| MS.gene054875 | MS.gene99525 | 0.800289 | 1.55E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene99525 | 0.823043 | 1.71E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene99525 | 0.827953 | 1.18E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene99525 | 0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene99525 | 0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene055442 | MS.gene99525 | 0.802097 | 6.59E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene99525 | 0.802589 | 5.22E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene99525 | 0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene99525 | 0.879187 | 1.53E-69 | -1.69E-46 |
| MS.gene056045 | MS.gene99525 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene056097 | MS.gene99525 | 0.814875 | 1.23E-51 | -1.69E-46 |
| MS.gene05615 | MS.gene99525 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene99525 | 0.843608 | 1.26E-58 | -1.69E-46 |
| MS.gene056480 | MS.gene99525 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene056638 | MS.gene99525 | 0.809106 | 2.23E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene99525 | 0.819612 | 1.06E-52 | -1.69E-46 |
| MS.gene056831 | MS.gene99525 | 0.810789 | 9.68E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene99525 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene057890 | MS.gene99525 | -0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene99525 | 0.812775 | 3.58E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene99525 | 0.851212 | 1.03E-60 | -1.69E-46 |
| MS.gene058159 | MS.gene99525 | 0.810056 | 1.39E-50 | -1.69E-46 |
| MS.gene058214 | MS.gene99525 | 0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene058278 | MS.gene99525 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene99525 | 0.82916 | 6.01E-55 | -1.69E-46 |
| MS.gene058292 | MS.gene99525 | 0.854753 | 9.98E-62 | -1.69E-46 |
| MS.gene058429 | MS.gene99525 | 0.846772 | 1.76E-59 | -1.69E-46 |
| MS.gene058638 | MS.gene99525 | 0.834823 | 2.40E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene99525 | 0.832735 | 7.98E-56 | -1.69E-46 |
| MS.gene058758 | MS.gene99525 | 0.843088 | 1.74E-58 | -1.69E-46 |
| MS.gene05897 | MS.gene99525 | 0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene99525 | 0.842243 | 2.91E-58 | -1.69E-46 |
| MS.gene059144 | MS.gene99525 | 0.80766 | 4.54E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene99525 | 0.825196 | 5.35E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene99525 | 0.83375 | 4.46E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene99525 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene99525 | 0.802527 | 5.38E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene99525 | 0.851182 | 1.05E-60 | -1.69E-46 |
| MS.gene060259 | MS.gene99525 | 0.818204 | 2.21E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene99525 | 0.84554 | 3.81E-59 | -1.69E-46 |
| MS.gene060380 | MS.gene99525 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene99525 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene99525 | 0.840243 | 9.78E-58 | -1.69E-46 |
| MS.gene060520 | MS.gene99525 | 0.826796 | 2.23E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene99525 | 0.84907 | 4.09E-60 | -1.69E-46 |
| MS.gene060637 | MS.gene99525 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene99525 | 0.82094 | 5.26E-53 | -1.69E-46 |
| MS.gene060840 | MS.gene99525 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene060850 | MS.gene99525 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene99525 | 0.810544 | 1.09E-50 | -1.69E-46 |
| MS.gene060852 | MS.gene99525 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene060870 | MS.gene99525 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene99525 | 0.838972 | 2.09E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene99525 | 0.848257 | 6.88E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene99525 | 0.809953 | 1.47E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene99525 | 0.830038 | 3.68E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene99525 | 0.818573 | 1.83E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene99525 | 0.825103 | 5.63E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene99525 | 0.844297 | 8.25E-59 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99525.t1 | MTR_1g040355 | 96.452 | 902 | 29 | 1 | 1 | 902 | 1 | 899 | 0.0 | 1788 |
| MS.gene99525.t1 | MTR_3g114350 | 69.683 | 884 | 196 | 13 | 9 | 887 | 7 | 823 | 0.0 | 1109 |
| MS.gene99525.t1 | MTR_0172s0010 | 63.445 | 952 | 226 | 13 | 11 | 902 | 23 | 912 | 0.0 | 1052 |
| MS.gene99525.t1 | MTR_3g114260 | 66.970 | 878 | 188 | 16 | 9 | 881 | 7 | 787 | 0.0 | 1022 |
| MS.gene99525.t1 | MTR_3g114150 | 68.176 | 817 | 167 | 14 | 15 | 824 | 14 | 744 | 0.0 | 973 |
| MS.gene99525.t1 | MTR_3g114360 | 56.452 | 124 | 23 | 2 | 757 | 880 | 64 | 156 | 2.95e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99525.t1 | AT5G55310 | 58.728 | 802 | 259 | 12 | 147 | 902 | 136 | 911 | 0.0 | 882 |
| MS.gene99525.t1 | AT5G55300 | 60.572 | 804 | 270 | 14 | 138 | 902 | 118 | 913 | 0.0 | 876 |
| MS.gene99525.t1 | AT5G55300 | 60.549 | 801 | 269 | 14 | 138 | 899 | 118 | 910 | 0.0 | 868 |
| MS.gene99525.t1 | AT5G55300 | 71.591 | 264 | 70 | 1 | 644 | 902 | 298 | 561 | 1.88e-126 | 393 |
| MS.gene99525.t1 | AT4G26701 | 85.294 | 68 | 10 | 0 | 835 | 902 | 2 | 69 | 3.52e-35 | 128 |
Find 188 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCATGTGATTCAGAATT+TGG | 0.154512 | 1.3:+23279613 | MS.gene99525:CDS |
| GTTATTCAAATACGTGTTTC+TGG | 0.158393 | 1.3:+23281771 | MS.gene99525:CDS |
| GCTACAGAATAATAATAATT+TGG | 0.158467 | 1.3:+23278711 | MS.gene99525:CDS |
| TGGCATGCTTATTCATTCTT+TGG | 0.234370 | 1.3:-23279011 | None:intergenic |
| AGAATTATATAGAGAGAATT+AGG | 0.239346 | 1.3:+23281959 | MS.gene99525:intron |
| ATCATTCACTTTGGATGATA+TGG | 0.241509 | 1.3:+23283045 | MS.gene99525:CDS |
| GACTGACTGGAAGGTGATAT+TGG | 0.273127 | 1.3:+23279586 | MS.gene99525:CDS |
| AGTTCAAAATTTGCGTCATT+TGG | 0.285153 | 1.3:+23278403 | MS.gene99525:CDS |
| TTGAATAACTTATTATTGAT+TGG | 0.287792 | 1.3:-23281757 | None:intergenic |
| CAAAATTCAAGGAAAACTTT+TGG | 0.292105 | 1.3:+23279564 | MS.gene99525:CDS |
| TTCTGGGAGCTAGTAGTTCT+TGG | 0.297922 | 1.3:+23281788 | MS.gene99525:CDS |
| AATCCTACCTCCTCTTGTTC+AGG | 0.326070 | 1.3:-23279300 | None:intergenic |
| TTATCTAGTGGTCTCTTAAC+AGG | 0.340703 | 1.3:-23278850 | None:intergenic |
| TCACCAGGAATAGGACATTC+AGG | 0.342349 | 1.3:-23281565 | None:intergenic |
| TGGGGTAAAGATGCTCTATA+AGG | 0.344361 | 1.3:+23279257 | MS.gene99525:CDS |
| GGCATGCTTATTCATTCTTT+GGG | 0.347185 | 1.3:-23279010 | None:intergenic |
| TCCCGTTCATGTTCATGTTA+AGG | 0.348445 | 1.3:+23278459 | MS.gene99525:CDS |
| CCATTTGCAGAAGGCACGTC+AGG | 0.348723 | 1.3:-23278250 | None:intergenic |
| TCCTTGGTAAAGATTCTATC+AGG | 0.354466 | 1.3:+23282771 | MS.gene99525:CDS |
| AAGTTCCGTTTGGTCTTTAG+AGG | 0.361026 | 1.3:-23283829 | None:intergenic |
| TATATGACAACAGTTGAATA+AGG | 0.363255 | 1.3:+23283387 | MS.gene99525:intron |
| AGTGACGTCGTAATTAATAT+TGG | 0.364207 | 1.3:+23281526 | MS.gene99525:CDS |
| CTCTGCTGGAAAAGTTTGCT+TGG | 0.364357 | 1.3:+23284639 | MS.gene99525:CDS |
| CAGTTACTTGGTTGGCGTAT+TGG | 0.364362 | 1.3:+23281728 | MS.gene99525:CDS |
| CTACAGAATAATAATAATTT+GGG | 0.367356 | 1.3:+23278712 | MS.gene99525:CDS |
| AAAGCTGTATATTACGCTTC+AGG | 0.368246 | 1.3:-23283856 | None:intergenic |
| CGTTCTGTGAGCTAGAACTT+TGG | 0.369103 | 1.3:-23278273 | None:intergenic |
| TTCAAAATGGCATTGTAAAC+AGG | 0.369518 | 1.3:-23282821 | None:intergenic |
| TGAATAACTTATTATTGATT+GGG | 0.379082 | 1.3:-23281756 | None:intergenic |
| TGAGATTTGTTGACAACAAC+AGG | 0.380616 | 1.3:-23278649 | None:intergenic |
| TTTACCCCATGGGGCTTGTA+AGG | 0.383102 | 1.3:-23279243 | None:intergenic |
| GGGATCTAGGTAGTTTATCT+TGG | 0.388665 | 1.3:-23284048 | None:intergenic |
| TGAGATTTCTTGACGACAAC+AGG | 0.389867 | 1.3:-23278604 | None:intergenic |
| TTCCACGGCAGATGCCTTAG+AGG | 0.390932 | 1.3:-23278311 | None:intergenic |
| AACTGTTCTGATTTATTGCC+TGG | 0.391976 | 1.3:-23279135 | None:intergenic |
| TATTGACAAACTAGCTTTGA+GGG | 0.401248 | 1.3:+23282050 | MS.gene99525:CDS |
| ACCTATGTGAGGTCCCCTTC+AGG | 0.407241 | 1.3:+23278379 | MS.gene99525:CDS |
| AAAAGTTCTTGTCTATAATC+AGG | 0.410472 | 1.3:+23283435 | MS.gene99525:CDS |
| GCACCAGGCAACTGATATCC+TGG | 0.414673 | 1.3:-23284069 | None:intergenic |
| GGAATAGGACATTCAGGAAT+TGG | 0.414990 | 1.3:-23281559 | None:intergenic |
| ATTCCTGAATGTCCTATTCC+TGG | 0.417771 | 1.3:+23281562 | MS.gene99525:CDS |
| TAAGGTTGTCTCAACCTCTA+AGG | 0.418822 | 1.3:+23278297 | MS.gene99525:CDS |
| ATTTGGCACCAATCATAAAT+CGG | 0.428927 | 1.3:-23279653 | None:intergenic |
| TTATTCATTCTTTGGGAAAG+AGG | 0.430629 | 1.3:-23279003 | None:intergenic |
| TCCTTAACATGAACATGAAC+GGG | 0.432434 | 1.3:-23278460 | None:intergenic |
| AAATACCTTTCACCAGGAAT+AGG | 0.432646 | 1.3:-23281574 | None:intergenic |
| CCTGACGTGCCTTCTGCAAA+TGG | 0.434901 | 1.3:+23278250 | MS.gene99525:CDS |
| TGAACCGAAGGTTGCGGAGG+TGG | 0.437744 | 1.3:+23278960 | MS.gene99525:CDS |
| TATATTATCCATCTCGTCTT+CGG | 0.438591 | 1.3:-23278530 | None:intergenic |
| TTCAGGAGCCAAGTTCCGTT+TGG | 0.438748 | 1.3:-23283839 | None:intergenic |
| TTATTCAAATACGTGTTTCT+GGG | 0.442275 | 1.3:+23281772 | MS.gene99525:CDS |
| TGAAAAGATTGATGAACTTA+AGG | 0.443289 | 1.3:+23283630 | MS.gene99525:CDS |
| ATTCAATGCATCATTCACTT+TGG | 0.446415 | 1.3:+23283036 | MS.gene99525:CDS |
| TCTAAAGACCAAACGGAACT+TGG | 0.446555 | 1.3:+23283831 | MS.gene99525:CDS |
| TTCTGCCCATCACCGGAGCT+TGG | 0.447038 | 1.3:-23279177 | None:intergenic |
| CCTTTCTGAACATTTGAAAG+TGG | 0.447386 | 1.3:-23278775 | None:intergenic |
| GGGGTAAAGATGCTCTATAA+GGG | 0.452829 | 1.3:+23279258 | MS.gene99525:CDS |
| TGAGAAAGCAAGGGCGTTGA+AGG | 0.458385 | 1.3:+23281837 | MS.gene99525:CDS |
| TTAGCATTAATTGACGGAGC+TGG | 0.460524 | 1.3:-23278919 | None:intergenic |
| TCTGCTGGAAAAGTTTGCTT+GGG | 0.462338 | 1.3:+23284640 | MS.gene99525:CDS |
| CAACTGATATCCTGGGATCT+AGG | 0.463630 | 1.3:-23284061 | None:intergenic |
| GGGAGCTAGTAGTTCTTGGA+AGG | 0.463756 | 1.3:+23281792 | MS.gene99525:CDS |
| GTCTGTTTAGCATTAATTGA+CGG | 0.464545 | 1.3:-23278925 | None:intergenic |
| TCATCCACCTCCGCAACCTT+CGG | 0.465576 | 1.3:-23278964 | None:intergenic |
| CTATAATCAGGCAAACAAAC+AGG | 0.466715 | 1.3:+23283447 | MS.gene99525:CDS |
| TTCTTGTTTAATACCAACAT+TGG | 0.470994 | 1.3:-23278812 | None:intergenic |
| ATATTAATTACGACGTCACT+TGG | 0.474080 | 1.3:-23281523 | None:intergenic |
| ATAATATACCATTGAGTGCT+AGG | 0.475378 | 1.3:+23278545 | MS.gene99525:CDS |
| GAATTATATAGAGAGAATTA+GGG | 0.478214 | 1.3:+23281960 | MS.gene99525:intron |
| TTAATGCAGTTTGACTTCCT+TGG | 0.478589 | 1.3:+23282755 | MS.gene99525:intron |
| CACCTCCTTACAAGCCCCAT+GGG | 0.479803 | 1.3:+23279238 | MS.gene99525:CDS |
| AGCTGAAAACAGATTACGAC+AGG | 0.483270 | 1.3:+23283788 | MS.gene99525:CDS |
| ATCCTACCTCCTCTTGTTCA+GGG | 0.483545 | 1.3:-23279299 | None:intergenic |
| CCAGGACTGTTCCGTGGACG+TGG | 0.487654 | 1.3:+23281306 | MS.gene99525:CDS |
| GACAAACTAGCTTTGAGGGC+TGG | 0.489859 | 1.3:+23282054 | MS.gene99525:CDS |
| TTATTGACAAACTAGCTTTG+AGG | 0.490023 | 1.3:+23282049 | MS.gene99525:CDS |
| TGATTGGTGCCAAATTGAAA+AGG | 0.492961 | 1.3:+23279661 | MS.gene99525:CDS |
| TAGCATTAATTGACGGAGCT+GGG | 0.493076 | 1.3:-23278918 | None:intergenic |
| TTCCTCCAAGCTCCGGTGAT+GGG | 0.501424 | 1.3:+23279172 | MS.gene99525:CDS |
| AACCTCGTGCCGCTTGCACC+AGG | 0.501592 | 1.3:-23284084 | None:intergenic |
| CCACCTCCTTACAAGCCCCA+TGG | 0.506147 | 1.3:+23279237 | MS.gene99525:CDS |
| TTGAATAAGGATACTAAAGA+TGG | 0.506735 | 1.3:+23283400 | MS.gene99525:CDS |
| ATCCCAGGATATCAGTTGCC+TGG | 0.512138 | 1.3:+23284066 | MS.gene99525:CDS |
| ATCTGCCGTGGAATCTTCTG+TGG | 0.512707 | 1.3:+23278321 | MS.gene99525:CDS |
| TGTTCAGGGGTCAAAGTCAC+CGG | 0.512937 | 1.3:-23279285 | None:intergenic |
| ATCTTCATCCTAGCACTCAA+TGG | 0.514251 | 1.3:-23278553 | None:intergenic |
| TACATGTGGGCTATTGTTGA+TGG | 0.514793 | 1.3:+23280848 | MS.gene99525:CDS |
| AGGTCTCAGAATCTGAAGTC+AGG | 0.515223 | 1.3:-23284677 | None:intergenic |
| TGCCCATCACCGGAGCTTGG+AGG | 0.518261 | 1.3:-23279174 | None:intergenic |
| CCACGTCCACGGAACAGTCC+TGG | 0.521504 | 1.3:-23281306 | None:intergenic |
| CTTCCTCCAAGCTCCGGTGA+TGG | 0.522085 | 1.3:+23279171 | MS.gene99525:CDS |
| GACATGATAATACAGTTACT+TGG | 0.523194 | 1.3:+23281716 | MS.gene99525:CDS |
| GCACGAGGTTCCTATTGAAA+AGG | 0.523214 | 1.3:+23284097 | MS.gene99525:CDS |
| ACTGACTGGAAGGTGATATT+GGG | 0.524562 | 1.3:+23279587 | MS.gene99525:CDS |
| TGTTGATGGTGTTAAAGAGA+AGG | 0.524705 | 1.3:+23280862 | MS.gene99525:CDS |
| CACATTATATGCAGTCATGC+GGG | 0.524764 | 1.3:+23279520 | MS.gene99525:CDS |
| ATAGAGCATCTTTACCCCAT+GGG | 0.525433 | 1.3:-23279253 | None:intergenic |
| ACCCCATGGGGCTTGTAAGG+AGG | 0.526519 | 1.3:-23279240 | None:intergenic |
| TGATAATACAGTTACTTGGT+TGG | 0.529080 | 1.3:+23281720 | MS.gene99525:CDS |
| CCATGGGGCTTGTAAGGAGG+TGG | 0.531241 | 1.3:-23279237 | None:intergenic |
| GGAAAATTGAAAAGACGCAT+TGG | 0.538081 | 1.3:+23281499 | MS.gene99525:CDS |
| CCACTTTCAAATGTTCAGAA+AGG | 0.540475 | 1.3:+23278775 | MS.gene99525:CDS |
| TAATTCTAGCAAACATGGTA+AGG | 0.541301 | 1.3:+23278489 | MS.gene99525:CDS |
| CACCAGGCAACTGATATCCT+GGG | 0.546235 | 1.3:-23284068 | None:intergenic |
| ACGAATTTGATGATGAAGAC+GGG | 0.546504 | 1.3:+23278122 | MS.gene99525:CDS |
| GGAAAAGTTTGCTTGGGCAA+TGG | 0.546584 | 1.3:+23284646 | MS.gene99525:CDS |
| CAGCAGCATGGCTCCAATGT+TGG | 0.547947 | 1.3:+23278799 | MS.gene99525:CDS |
| CTCTTAACAGGCAGTGTAGA+CGG | 0.549550 | 1.3:-23278838 | None:intergenic |
| TATAGAGCATCTTTACCCCA+TGG | 0.551768 | 1.3:-23279254 | None:intergenic |
| CTCCTTAACATGAACATGAA+CGG | 0.552218 | 1.3:-23278461 | None:intergenic |
| TACATTAAATAGTCATCTGA+AGG | 0.554760 | 1.3:+23282976 | MS.gene99525:CDS |
| GACTTTGACCCCTGAACAAG+AGG | 0.554890 | 1.3:+23279290 | MS.gene99525:CDS |
| ACGTCGTAATTAATATTGGA+AGG | 0.557597 | 1.3:+23281530 | MS.gene99525:CDS |
| ACTAAACTTCCTCCAAGCTC+CGG | 0.560775 | 1.3:+23279165 | MS.gene99525:CDS |
| AGATGATTTATTCACTGATG+TGG | 0.561330 | 1.3:-23279031 | None:intergenic |
| TGAAGAATCCGAAGACGAGA+TGG | 0.562000 | 1.3:+23278522 | MS.gene99525:CDS |
| TGAATGATGCATTGAATGTA+CGG | 0.565223 | 1.3:-23283030 | None:intergenic |
| CTCAATTGCATTCAGAAACA+AGG | 0.566548 | 1.3:+23278182 | MS.gene99525:CDS |
| AGAAGGTGACAACAAGTTGA+AGG | 0.567237 | 1.3:+23282614 | MS.gene99525:CDS |
| CATTTGCAGAAGGCACGTCA+GGG | 0.569400 | 1.3:-23278249 | None:intergenic |
| GAACTTTGGCCATTTGCAGA+AGG | 0.570536 | 1.3:-23278259 | None:intergenic |
| ATGTTGGTATTAAACAAGAA+AGG | 0.570563 | 1.3:+23278815 | MS.gene99525:CDS |
| TGTCACCTCTAAAGACCAAA+CGG | 0.571272 | 1.3:+23283824 | MS.gene99525:CDS |
| ATGATATTCCTTTGTCAGCA+AGG | 0.571899 | 1.3:+23278686 | MS.gene99525:CDS |
| GACAATAATTCTAGCAAACA+TGG | 0.574782 | 1.3:+23278484 | MS.gene99525:CDS |
| TGCCTGGTGCAAGCGGCACG+AGG | 0.576438 | 1.3:+23284082 | MS.gene99525:CDS |
| GTAGAAAATGTGACTGCAGA+AGG | 0.580405 | 1.3:+23282597 | MS.gene99525:CDS |
| GAAATCTGAACCGAAGGTTG+CGG | 0.580628 | 1.3:+23278954 | MS.gene99525:CDS |
| AGGAAAAGTATGAGAAAGCA+AGG | 0.580780 | 1.3:+23281827 | MS.gene99525:CDS |
| CGTTCATGTTCATGTTAAGG+AGG | 0.581195 | 1.3:+23278462 | MS.gene99525:CDS |
| AACCTCTAAGGCATCTGCCG+TGG | 0.583051 | 1.3:+23278309 | MS.gene99525:CDS |
| TTCTAGCTCACAGAACGGTA+AGG | 0.583084 | 1.3:+23278279 | MS.gene99525:CDS |
| CACGAATTTGATGATGAAGA+CGG | 0.583408 | 1.3:+23278121 | MS.gene99525:CDS |
| AATGTCCTATTCCTGGTGAA+AGG | 0.583669 | 1.3:+23281569 | MS.gene99525:CDS |
| ATCGGTGAAATCTGAACCGA+AGG | 0.590409 | 1.3:+23278948 | MS.gene99525:CDS |
| ATCTGAACCGAAGGTTGCGG+AGG | 0.591598 | 1.3:+23278957 | MS.gene99525:CDS |
| AGATAAACTACCTAGATCCC+AGG | 0.592465 | 1.3:+23284051 | MS.gene99525:CDS |
| TGGGATGCTCTCCACGTCCA+CGG | 0.594039 | 1.3:-23281317 | None:intergenic |
| TATCAGTTGCCTGGTGCAAG+CGG | 0.597542 | 1.3:+23284075 | MS.gene99525:CDS |
| GATGCTCTATAAGGGGAAGC+CGG | 0.601756 | 1.3:+23279266 | MS.gene99525:CDS |
| TTTGAGGGCTGGCAATGAGA+AGG | 0.602681 | 1.3:+23282065 | MS.gene99525:CDS |
| GTATGAAAATACAGTTGAGG+TGG | 0.606610 | 1.3:+23282793 | MS.gene99525:CDS |
| GTAATTGTAGGCTCTTTCGA+AGG | 0.610961 | 1.3:+23283765 | MS.gene99525:intron |
| TGTAGCCGCCTTGCTGACAA+AGG | 0.611232 | 1.3:-23278694 | None:intergenic |
| GGGTAAAGATGCTCTATAAG+GGG | 0.613483 | 1.3:+23279259 | MS.gene99525:CDS |
| TCCTGAAGGGGACCTCACAT+AGG | 0.613650 | 1.3:-23278380 | None:intergenic |
| CGTCGTAATTAATATTGGAA+GGG | 0.614872 | 1.3:+23281531 | MS.gene99525:CDS |
| AACAGTAAATACCTTTCACC+AGG | 0.615831 | 1.3:-23281580 | None:intergenic |
| TGGACTACTTTGGTTCACAA+TGG | 0.616634 | 1.3:+23279204 | MS.gene99525:CDS |
| AAATCTAGTAATAACAATGG+TGG | 0.618035 | 1.3:+23278736 | MS.gene99525:CDS |
| CCACATTATATGCAGTCATG+CGG | 0.618794 | 1.3:+23279519 | MS.gene99525:CDS |
| AATTAATGCTAAACAGACAT+CGG | 0.620417 | 1.3:+23278930 | MS.gene99525:CDS |
| CCGCATGACTGCATATAATG+TGG | 0.622713 | 1.3:-23279519 | None:intergenic |
| TCTGCCGTGGAATCTTCTGT+GGG | 0.622872 | 1.3:+23278322 | MS.gene99525:CDS |
| TAGAGCATCTTTACCCCATG+GGG | 0.631056 | 1.3:-23279252 | None:intergenic |
| TATACCCACAGAAGATTCCA+CGG | 0.633738 | 1.3:-23278326 | None:intergenic |
| GGAGCTAGTAGTTCTTGGAA+GGG | 0.634366 | 1.3:+23281793 | MS.gene99525:CDS |
| GAGCTAGTAGTTCTTGGAAG+GGG | 0.635071 | 1.3:+23281794 | MS.gene99525:CDS |
| CGTGCTGTTTCAAAATCTCA+CGG | 0.637487 | 1.3:+23283586 | MS.gene99525:CDS |
| ATTTGCAGAAGGCACGTCAG+GGG | 0.639024 | 1.3:-23278248 | None:intergenic |
| CATGGGGCTTGTAAGGAGGT+GGG | 0.640775 | 1.3:-23279236 | None:intergenic |
| TCCTACCTCCTCTTGTTCAG+GGG | 0.641141 | 1.3:-23279298 | None:intergenic |
| GACGAAGCTGCTGACACAGT+TGG | 0.641967 | 1.3:+23282558 | MS.gene99525:CDS |
| GGAAAATCTAGTAATAACAA+TGG | 0.642336 | 1.3:+23278733 | MS.gene99525:CDS |
| CTTCTCATAGTCACGATGGA+CGG | 0.642362 | 1.3:+23278212 | MS.gene99525:CDS |
| TTGGAAGGGGCAAAGTGACA+AGG | 0.645098 | 1.3:+23281807 | MS.gene99525:CDS |
| GAACCACCAGGACTGTTCCG+TGG | 0.646064 | 1.3:+23281300 | MS.gene99525:CDS |
| TGGACGTGGAGAGCATCCCA+AGG | 0.646324 | 1.3:+23281320 | MS.gene99525:CDS |
| GTTCAGAAAGGACAGCAGCA+TGG | 0.647306 | 1.3:+23278787 | MS.gene99525:CDS |
| ACAAGAGGAGAAATACATGT+GGG | 0.652557 | 1.3:+23280835 | MS.gene99525:CDS |
| AAAATGGCATTGTAAACAGG+AGG | 0.658280 | 1.3:-23282818 | None:intergenic |
| CAAATCTCAAAACCTATGTG+AGG | 0.661711 | 1.3:+23278368 | MS.gene99525:CDS |
| TTTCTTAACAGAAGAATGCG+AGG | 0.662718 | 1.3:-23278881 | None:intergenic |
| GAGGAATCAGTCTTATCTAG+TGG | 0.665670 | 1.3:-23278862 | None:intergenic |
| CAAAGTTCTAGCTCACAGAA+CGG | 0.668666 | 1.3:+23278274 | MS.gene99525:CDS |
| TTTGACCCCTGAACAAGAGG+AGG | 0.669124 | 1.3:+23279293 | MS.gene99525:CDS |
| ACCTGATAGAATCTTTACCA+AGG | 0.670504 | 1.3:-23282772 | None:intergenic |
| AACAAGAGGAGAAATACATG+TGG | 0.673205 | 1.3:+23280834 | MS.gene99525:CDS |
| TCAACTTCTCATAGTCACGA+TGG | 0.681705 | 1.3:+23278208 | MS.gene99525:CDS |
| AAACGTCACTAAAGTCAACA+AGG | 0.682671 | 1.3:+23279071 | MS.gene99525:CDS |
| GGAAAAGTATGAGAAAGCAA+GGG | 0.683454 | 1.3:+23281828 | MS.gene99525:CDS |
| CAGGTATGAAAATACAGTTG+AGG | 0.687734 | 1.3:+23282790 | MS.gene99525:CDS |
| TTATATAGAGAGAATTAGGG+CGG | 0.700748 | 1.3:+23281963 | MS.gene99525:CDS |
| CGTCCACGGAACAGTCCTGG+TGG | 0.703564 | 1.3:-23281303 | None:intergenic |
| ACCTCCTTACAAGCCCCATG+GGG | 0.724905 | 1.3:+23279239 | MS.gene99525:CDS |
| ATATTCCTTTGTCAGCAAGG+CGG | 0.731343 | 1.3:+23278689 | MS.gene99525:CDS |
| AGGATGAAGATGAACAGTGA+CGG | 0.750770 | 1.3:+23278565 | MS.gene99525:CDS |
| GCTGAAAACAGATTACGACA+GGG | 0.763147 | 1.3:+23283789 | MS.gene99525:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAATTTATTTAATGTT+AGG | - | chr1.3:23279970-23279989 | None:intergenic | 10.0% |
| !!! | TAATTTTTGTTAAATCTTTT+AGG | + | chr1.3:23281260-23281279 | MS.gene99525:intron | 10.0% |
| !!! | TATACTTTATTTTATTAGAT+GGG | + | chr1.3:23281478-23281497 | MS.gene99525:intron | 10.0% |
| !!! | TTATACTTTATTTTATTAGA+TGG | + | chr1.3:23281477-23281496 | MS.gene99525:intron | 10.0% |
| !! | CTACAGAATAATAATAATTT+GGG | + | chr1.3:23278712-23278731 | MS.gene99525:CDS | 15.0% |
| !! | TTGAATAACTTATTATTGAT+TGG | - | chr1.3:23281760-23281779 | None:intergenic | 15.0% |
| !!! | ACTTCAATATAGTTTTTAAA+AGG | - | chr1.3:23283274-23283293 | None:intergenic | 15.0% |
| !!! | CTTTTTCTTATATATAAGAT+CGG | - | chr1.3:23284374-23284393 | None:intergenic | 15.0% |
| !!! | TAAAAGAACCTTTTTAATTT+TGG | + | chr1.3:23281915-23281934 | MS.gene99525:intron | 15.0% |
| !!! | TAAATAAAAGTTGATGTATA+TGG | + | chr1.3:23284399-23284418 | MS.gene99525:intron | 15.0% |
| !!! | TCTTTAAAAGATCAAATTAA+AGG | + | chr1.3:23283302-23283321 | MS.gene99525:intron | 15.0% |
| !!! | TGAATAACTTATTATTGATT+GGG | - | chr1.3:23281759-23281778 | None:intergenic | 15.0% |
| !!! | TGATAATATTCTTTAGAATT+TGG | + | chr1.3:23283653-23283672 | MS.gene99525:intron | 15.0% |
| !!! | TGATAATTGTTATTGTTTAT+TGG | + | chr1.3:23281349-23281368 | MS.gene99525:intron | 15.0% |
| !!! | TTATTTGTTTTTCATCAATT+GGG | - | chr1.3:23284218-23284237 | None:intergenic | 15.0% |
| !! | AAAATTAACTGACAAAAACA+AGG | + | chr1.3:23279997-23280016 | MS.gene99525:intron | 20.0% |
| !! | AATTATAACAATGAAGTGTA+TGG | - | chr1.3:23283890-23283909 | None:intergenic | 20.0% |
| !! | AGAATTATATAGAGAGAATT+AGG | + | chr1.3:23281959-23281978 | MS.gene99525:intron | 20.0% |
| !! | ATTAAAAAGACAAACAAGTT+TGG | - | chr1.3:23280915-23280934 | None:intergenic | 20.0% |
| !! | ATTTGAAAAATACACATTGA+AGG | - | chr1.3:23282323-23282342 | None:intergenic | 20.0% |
| !! | GAATTATATAGAGAGAATTA+GGG | + | chr1.3:23281960-23281979 | MS.gene99525:intron | 20.0% |
| !! | GCTACAGAATAATAATAATT+TGG | + | chr1.3:23278711-23278730 | MS.gene99525:CDS | 20.0% |
| !! | TAAAAGGAAAAAAAATCTCA+AGG | - | chr1.3:23280250-23280269 | None:intergenic | 20.0% |
| !! | TAAAGAAGATTTAAAAACTG+TGG | + | chr1.3:23284013-23284032 | MS.gene99525:CDS | 20.0% |
| !! | TAAGTTTGTAAATCTTACAT+GGG | + | chr1.3:23279887-23279906 | MS.gene99525:intron | 20.0% |
| !! | TAATTCCTAATATCATCATA+CGG | + | chr1.3:23280067-23280086 | MS.gene99525:intron | 20.0% |
| !! | TCAACAAAAGTTTATGTATT+CGG | - | chr1.3:23284438-23284457 | None:intergenic | 20.0% |
| !! | TTAAAAAGACAAACAAGTTT+GGG | - | chr1.3:23280914-23280933 | None:intergenic | 20.0% |
| !! | TTAAAAGCAAATGAATACTA+TGG | + | chr1.3:23281627-23281646 | MS.gene99525:intron | 20.0% |
| !! | TTAAGTTTGTAAATCTTACA+TGG | + | chr1.3:23279886-23279905 | MS.gene99525:intron | 20.0% |
| !!! | AAAAAAATGTAAACTTGCTT+CGG | + | chr1.3:23281377-23281396 | MS.gene99525:intron | 20.0% |
| !!! | AAGGTATTCCAAAATTAAAA+AGG | - | chr1.3:23281926-23281945 | None:intergenic | 20.0% |
| !!! | ACTTTAGTATTGATTTTGAT+TGG | + | chr1.3:23284561-23284580 | MS.gene99525:intron | 20.0% |
| !!! | AGCTTTTGGATTTTAATATA+TGG | + | chr1.3:23280649-23280668 | MS.gene99525:intron | 20.0% |
| !!! | GAAATCCTTTTAAAAATTAC+TGG | - | chr1.3:23278148-23278167 | None:intergenic | 20.0% |
| !!! | GACATTTTTTTTCAATCTTT+GGG | + | chr1.3:23280559-23280578 | MS.gene99525:intron | 20.0% |
| !!! | GCTTTTGGATTTTAATATAT+GGG | + | chr1.3:23280650-23280669 | MS.gene99525:intron | 20.0% |
| !!! | GTTATTTGTTTTTCATCAAT+TGG | - | chr1.3:23284219-23284238 | None:intergenic | 20.0% |
| !!! | TACACTTTGAAAATGAAATA+AGG | - | chr1.3:23282394-23282413 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTTCATCAATTG+GGG | - | chr1.3:23284217-23284236 | None:intergenic | 20.0% |
| !!! | TCATTTCTATCATTTTCAAA+TGG | - | chr1.3:23279733-23279752 | None:intergenic | 20.0% |
| !!! | TGACATTTTTTTTCAATCTT+TGG | + | chr1.3:23280558-23280577 | MS.gene99525:intron | 20.0% |
| !!! | TTTTGTTAAATCTTTTAGGT+TGG | + | chr1.3:23281264-23281283 | MS.gene99525:intron | 20.0% |
| ! | AAAACACATTAAAGCCTTTA+TGG | - | chr1.3:23284333-23284352 | None:intergenic | 25.0% |
| ! | AAAAGTTCTTGTCTATAATC+AGG | + | chr1.3:23283435-23283454 | MS.gene99525:CDS | 25.0% |
| ! | AAAATCCAAAAGCTTCAAAA+GGG | - | chr1.3:23280643-23280662 | None:intergenic | 25.0% |
| ! | AAATCATGTGATTCAGAATT+TGG | + | chr1.3:23279613-23279632 | MS.gene99525:CDS | 25.0% |
| ! | AAATCTAGTAATAACAATGG+TGG | + | chr1.3:23278736-23278755 | MS.gene99525:CDS | 25.0% |
| ! | AACAATTATCATAACAACCT+TGG | - | chr1.3:23281340-23281359 | None:intergenic | 25.0% |
| ! | AACTGTTGTCATATAATTCA+AGG | - | chr1.3:23283382-23283401 | None:intergenic | 25.0% |
| ! | AATTAATGCTAAACAGACAT+CGG | + | chr1.3:23278930-23278949 | MS.gene99525:CDS | 25.0% |
| ! | ACAATTATCATAACAACCTT+GGG | - | chr1.3:23281339-23281358 | None:intergenic | 25.0% |
| ! | ACATTTCAAATGTAAAAGCT+TGG | - | chr1.3:23281189-23281208 | None:intergenic | 25.0% |
| ! | ACTGTTGTCATATAATTCAA+GGG | - | chr1.3:23283381-23283400 | None:intergenic | 25.0% |
| ! | AGGAATTAGGAATAAACAAA+TGG | - | chr1.3:23280055-23280074 | None:intergenic | 25.0% |
| ! | AGTTAACAGAAGAAAAGTTA+AGG | - | chr1.3:23281161-23281180 | None:intergenic | 25.0% |
| ! | ATACAGGATAAAGAAAAAGA+TGG | + | chr1.3:23283944-23283963 | MS.gene99525:intron | 25.0% |
| ! | ATGTTGGTATTAAACAAGAA+AGG | + | chr1.3:23278815-23278834 | MS.gene99525:CDS | 25.0% |
| ! | CTTAACTGCTAATACTTAAA+GGG | + | chr1.3:23282705-23282724 | MS.gene99525:intron | 25.0% |
| ! | GGAAAATCTAGTAATAACAA+TGG | + | chr1.3:23278733-23278752 | MS.gene99525:CDS | 25.0% |
| ! | GTATGATGATATTAGGAATT+AGG | - | chr1.3:23280068-23280087 | None:intergenic | 25.0% |
| ! | TAAAATCCAAAAGCTTCAAA+AGG | - | chr1.3:23280644-23280663 | None:intergenic | 25.0% |
| ! | TAAACTTAGTATGTATATGC+AGG | + | chr1.3:23279493-23279512 | MS.gene99525:intron | 25.0% |
| ! | TAAATTCTGTATGAGATACA+TGG | - | chr1.3:23280370-23280389 | None:intergenic | 25.0% |
| ! | TACATTAAATAGTCATCTGA+AGG | + | chr1.3:23282976-23282995 | MS.gene99525:CDS | 25.0% |
| ! | TATATGACAACAGTTGAATA+AGG | + | chr1.3:23283387-23283406 | MS.gene99525:intron | 25.0% |
| ! | TCAAACCAAAAACAACATTT+GGG | - | chr1.3:23284525-23284544 | None:intergenic | 25.0% |
| ! | TCTTAACTGCTAATACTTAA+AGG | + | chr1.3:23282704-23282723 | MS.gene99525:intron | 25.0% |
| ! | TGAAAAGATTGATGAACTTA+AGG | + | chr1.3:23283630-23283649 | MS.gene99525:CDS | 25.0% |
| ! | TGGAAGGTTGTAAAATTAAA+AGG | - | chr1.3:23280266-23280285 | None:intergenic | 25.0% |
| ! | TTATGATGCACTTCATTATT+TGG | - | chr1.3:23280523-23280542 | None:intergenic | 25.0% |
| ! | TTATTCAAATACGTGTTTCT+GGG | + | chr1.3:23281772-23281791 | MS.gene99525:CDS | 25.0% |
| ! | TTCAAACCAAAAACAACATT+TGG | - | chr1.3:23284526-23284545 | None:intergenic | 25.0% |
| ! | TTGAATAAGGATACTAAAGA+TGG | + | chr1.3:23283400-23283419 | MS.gene99525:CDS | 25.0% |
| ! | TTGAGATTTATGTAACATAC+AGG | + | chr1.3:23283928-23283947 | MS.gene99525:intron | 25.0% |
| ! | TTTCTTATATATAAGATCGG+AGG | - | chr1.3:23284371-23284390 | None:intergenic | 25.0% |
| !! | ACAAATGTTTTCACTGTTTT+AGG | + | chr1.3:23279332-23279351 | MS.gene99525:intron | 25.0% |
| !! | AGAATAAACCAATTTAAGAC+CGG | - | chr1.3:23282687-23282706 | None:intergenic | 25.0% |
| !! | CAAAATTCAAGGAAAACTTT+TGG | + | chr1.3:23279564-23279583 | MS.gene99525:CDS | 25.0% |
| !! | GCTAGTTTATAAAGTTTACA+TGG | + | chr1.3:23280604-23280623 | MS.gene99525:intron | 25.0% |
| !! | TAAACATTTTCTCACCTTTT+TGG | - | chr1.3:23282850-23282869 | None:intergenic | 25.0% |
| !! | TAAACTTTATAAACTAGCCT+AGG | - | chr1.3:23280602-23280621 | None:intergenic | 25.0% |
| !! | TCTTTTTAATGTTTGATCAG+CGG | + | chr1.3:23280925-23280944 | MS.gene99525:intron | 25.0% |
| !! | TTAATATATGGGATTTGTTC+CGG | + | chr1.3:23280661-23280680 | MS.gene99525:intron | 25.0% |
| !! | TTATAGAAGATTTTACCAAG+AGG | + | chr1.3:23282344-23282363 | MS.gene99525:intron | 25.0% |
| !! | TTCTTGTTTAATACCAACAT+TGG | - | chr1.3:23278815-23278834 | None:intergenic | 25.0% |
| !! | TTTGCCTTTTTCTTAAAAGA+TGG | - | chr1.3:23279105-23279124 | None:intergenic | 25.0% |
| !!! | ACAATTTTTCCCTTTTGTTT+TGG | + | chr1.3:23281075-23281094 | MS.gene99525:intron | 25.0% |
| !!! | AGAAGTTTCTTTTTAAGCAT+AGG | + | chr1.3:23280972-23280991 | MS.gene99525:intron | 25.0% |
| !!! | ATTTGTTTTTCATCAATTGG+GGG | - | chr1.3:23284216-23284235 | None:intergenic | 25.0% |
| !!! | ATTTTACACCGATTTATGAT+TGG | + | chr1.3:23279645-23279664 | MS.gene99525:CDS | 25.0% |
| !!! | CATTTTGTTTGAAATTCAGA+GGG | + | chr1.3:23283711-23283730 | MS.gene99525:intron | 25.0% |
| !!! | TATTTGATTTGCAAAAGTCA+CGG | - | chr1.3:23282504-23282523 | None:intergenic | 25.0% |
| !!! | TCATTTTGTTTGAAATTCAG+AGG | + | chr1.3:23283710-23283729 | MS.gene99525:intron | 25.0% |
| !!! | TTGTTTTTATCAGGAGAAAA+AGG | + | chr1.3:23280790-23280809 | MS.gene99525:intron | 25.0% |
| !!! | TTTCATTTTTTCCTCCTTTA+GGG | - | chr1.3:23280816-23280835 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCAATCTTTGGGA+AGG | + | chr1.3:23280563-23280582 | MS.gene99525:intron | 25.0% |
| AAACAACTAACATCTGCATA+TGG | - | chr1.3:23279809-23279828 | None:intergenic | 30.0% | |
| AAACCAAAAACAACATTTGG+GGG | - | chr1.3:23284523-23284542 | None:intergenic | 30.0% | |
| AAGGCAAATTTCAAAAAACC+AGG | + | chr1.3:23279117-23279136 | MS.gene99525:CDS | 30.0% | |
| AAGTATGCTAAATACTTGGA+AGG | + | chr1.3:23282225-23282244 | MS.gene99525:intron | 30.0% | |
| AATAACAGTCAAGCTTCTAT+TGG | + | chr1.3:23284233-23284252 | MS.gene99525:intron | 30.0% | |
| ACATTGGATGTTATATGACT+TGG | + | chr1.3:23279398-23279417 | MS.gene99525:intron | 30.0% | |
| ACGTCGTAATTAATATTGGA+AGG | + | chr1.3:23281530-23281549 | MS.gene99525:CDS | 30.0% | |
| AGATGATTTATTCACTGATG+TGG | - | chr1.3:23279034-23279053 | None:intergenic | 30.0% | |
| AGCAAATGAATACTATGGAT+TGG | + | chr1.3:23281632-23281651 | MS.gene99525:intron | 30.0% | |
| AGCACATCTATATGTTATCT+AGG | - | chr1.3:23282137-23282156 | None:intergenic | 30.0% | |
| AGTAATTGACAATTCCTTCT+TGG | + | chr1.3:23281006-23281025 | MS.gene99525:intron | 30.0% | |
| AGTGACGTCGTAATTAATAT+TGG | + | chr1.3:23281526-23281545 | MS.gene99525:CDS | 30.0% | |
| AGTTCAAAATTTGCGTCATT+TGG | + | chr1.3:23278403-23278422 | MS.gene99525:CDS | 30.0% | |
| ATAAAACGCAATGAAGAGAT+AGG | - | chr1.3:23282468-23282487 | None:intergenic | 30.0% | |
| ATAATATACCATTGAGTGCT+AGG | + | chr1.3:23278545-23278564 | MS.gene99525:CDS | 30.0% | |
| ATATATTGCCTATTAGACTG+AGG | + | chr1.3:23282879-23282898 | MS.gene99525:intron | 30.0% | |
| ATATTAATTACGACGTCACT+TGG | - | chr1.3:23281526-23281545 | None:intergenic | 30.0% | |
| ATCAGACTAGTAATCCATAA+AGG | + | chr1.3:23284316-23284335 | MS.gene99525:intron | 30.0% | |
| ATCATTCACTTTGGATGATA+TGG | + | chr1.3:23283045-23283064 | MS.gene99525:CDS | 30.0% | |
| ATCTATATGTTATCTAGGGA+AGG | - | chr1.3:23282132-23282151 | None:intergenic | 30.0% | |
| ATGTATATGCCTGTATTAAC+CGG | - | chr1.3:23280683-23280702 | None:intergenic | 30.0% | |
| ATTCAATGCATCATTCACTT+TGG | + | chr1.3:23283036-23283055 | MS.gene99525:CDS | 30.0% | |
| ATTTGGCACCAATCATAAAT+CGG | - | chr1.3:23279656-23279675 | None:intergenic | 30.0% | |
| CAAACCAAAAACAACATTTG+GGG | - | chr1.3:23284524-23284543 | None:intergenic | 30.0% | |
| CAGCGCAAAAATTAAGAAAA+TGG | + | chr1.3:23283974-23283993 | MS.gene99525:CDS | 30.0% | |
| CATAAATAATTGCCATGAGA+TGG | - | chr1.3:23282423-23282442 | None:intergenic | 30.0% | |
| CATGCAAAAAGCAAAATTCA+AGG | + | chr1.3:23279553-23279572 | MS.gene99525:CDS | 30.0% | |
| CGTCGTAATTAATATTGGAA+GGG | + | chr1.3:23281531-23281550 | MS.gene99525:CDS | 30.0% | |
| CTAAGAAAAAGCTTCACAAA+AGG | - | chr1.3:23280723-23280742 | None:intergenic | 30.0% | |
| CTGATAAAAACAAGAGAAGA+GGG | - | chr1.3:23280783-23280802 | None:intergenic | 30.0% | |
| CTTATGATTTACATTTGCTC+AGG | + | chr1.3:23282530-23282549 | MS.gene99525:intron | 30.0% | |
| GACAATAATTCTAGCAAACA+TGG | + | chr1.3:23278484-23278503 | MS.gene99525:CDS | 30.0% | |
| GACATGATAATACAGTTACT+TGG | + | chr1.3:23281716-23281735 | MS.gene99525:CDS | 30.0% | |
| GCACATCTATATGTTATCTA+GGG | - | chr1.3:23282136-23282155 | None:intergenic | 30.0% | |
| GTAATTGACAATTCCTTCTT+GGG | + | chr1.3:23281007-23281026 | MS.gene99525:intron | 30.0% | |
| GTCAAAGTATGCTAAATACT+TGG | + | chr1.3:23282221-23282240 | MS.gene99525:intron | 30.0% | |
| GTCTGTTTAGCATTAATTGA+CGG | - | chr1.3:23278928-23278947 | None:intergenic | 30.0% | |
| GTTATTCAAATACGTGTTTC+TGG | + | chr1.3:23281771-23281790 | MS.gene99525:CDS | 30.0% | |
| TAAGCAAGATCATACAAACA+AGG | - | chr1.3:23284265-23284284 | None:intergenic | 30.0% | |
| TAATTCTAGCAAACATGGTA+AGG | + | chr1.3:23278489-23278508 | MS.gene99525:CDS | 30.0% | |
| TATATTATCCATCTCGTCTT+CGG | - | chr1.3:23278533-23278552 | None:intergenic | 30.0% | |
| TCTATATGTTATCTAGGGAA+GGG | - | chr1.3:23282131-23282150 | None:intergenic | 30.0% | |
| TGAATGATGCATTGAATGTA+CGG | - | chr1.3:23283033-23283052 | None:intergenic | 30.0% | |
| TGATAATACAGTTACTTGGT+TGG | + | chr1.3:23281720-23281739 | MS.gene99525:CDS | 30.0% | |
| TTATATAGAGAGAATTAGGG+CGG | + | chr1.3:23281963-23281982 | MS.gene99525:CDS | 30.0% | |
| TTCAAAATGGCATTGTAAAC+AGG | - | chr1.3:23282824-23282843 | None:intergenic | 30.0% | |
| TTGAGAATTAACTTTGCGTT+TGG | + | chr1.3:23279828-23279847 | MS.gene99525:intron | 30.0% | |
| TTGTAAATCTTACATGGGAT+TGG | + | chr1.3:23279892-23279911 | MS.gene99525:intron | 30.0% | |
| TTTACTGTTCCATAACTTCT+TGG | + | chr1.3:23281594-23281613 | MS.gene99525:intron | 30.0% | |
| ! | AAATTTTGAACTTCCTGAAG+GGG | - | chr1.3:23278395-23278414 | None:intergenic | 30.0% |
| ! | AACAGACAAAGGGTTAATTT+TGG | + | chr1.3:23280287-23280306 | MS.gene99525:intron | 30.0% |
| ! | ATTACTAGTCTGATTCTGAT+GGG | - | chr1.3:23284310-23284329 | None:intergenic | 30.0% |
| ! | CAAATTTTGAACTTCCTGAA+GGG | - | chr1.3:23278396-23278415 | None:intergenic | 30.0% |
| ! | CAGATTGTTGTGTATTTTAC+TGG | + | chr1.3:23283502-23283521 | MS.gene99525:intron | 30.0% |
| ! | CATTTTCTTAATTTTTGCGC+TGG | - | chr1.3:23283976-23283995 | None:intergenic | 30.0% |
| ! | GAATATCTCAAAGCATCATT+TGG | + | chr1.3:23279751-23279770 | MS.gene99525:intron | 30.0% |
| ! | GATGTATATGGTCTAAAACT+TGG | + | chr1.3:23284411-23284430 | MS.gene99525:intron | 30.0% |
| ! | TAAACTTGCTTCGGATATAA+TGG | + | chr1.3:23281386-23281405 | MS.gene99525:intron | 30.0% |
| ! | TCTTCTTCTCCTTTTCAATT+TGG | - | chr1.3:23279673-23279692 | None:intergenic | 30.0% |
| ! | TGATGTATCTTTTCCATAAC+AGG | + | chr1.3:23283540-23283559 | MS.gene99525:intron | 30.0% |
| ! | TTATTCATTCTTTGGGAAAG+AGG | - | chr1.3:23279006-23279025 | None:intergenic | 30.0% |
| ! | TTTGGAATACCTTAACATCT+GGG | + | chr1.3:23281933-23281952 | MS.gene99525:intron | 30.0% |
| !! | AATGTTTTCACTGTTTTAGG+TGG | + | chr1.3:23279335-23279354 | MS.gene99525:intron | 30.0% |
| !! | ATCTGCTTTTCTCAATTATC+AGG | + | chr1.3:23282911-23282930 | MS.gene99525:intron | 30.0% |
| !! | GTATGATCTTGCTTATTTTC+CGG | + | chr1.3:23284270-23284289 | MS.gene99525:intron | 30.0% |
| !! | GTTTCTTTTTAAGCATAGGT+AGG | + | chr1.3:23280976-23280995 | MS.gene99525:intron | 30.0% |
| !! | TATTGACAAACTAGCTTTGA+GGG | + | chr1.3:23282050-23282069 | MS.gene99525:CDS | 30.0% |
| !! | TCTTTAGAATTTGGAAACCA+TGG | + | chr1.3:23283662-23283681 | MS.gene99525:intron | 30.0% |
| !! | TGACTAACATACTCTTGTTT+TGG | + | chr1.3:23284588-23284607 | MS.gene99525:intron | 30.0% |
| !! | TGCTCCATCTTTTAAGAAAA+AGG | + | chr1.3:23279098-23279117 | MS.gene99525:CDS | 30.0% |
| !! | TGGAAAAAGTGTTCATAAGT+GGG | + | chr1.3:23279418-23279437 | MS.gene99525:intron | 30.0% |
| !! | TGTTTTTGTGAGTTTCACAT+TGG | + | chr1.3:23279382-23279401 | MS.gene99525:intron | 30.0% |
| !! | TTATTGACAAACTAGCTTTG+AGG | + | chr1.3:23282049-23282068 | MS.gene99525:CDS | 30.0% |
| !! | TTGGAAAAAGTGTTCATAAG+TGG | + | chr1.3:23279417-23279436 | MS.gene99525:intron | 30.0% |
| !!! | ACCTTTTTGGAACTTCAAAA+TGG | - | chr1.3:23282837-23282856 | None:intergenic | 30.0% |
| !!! | AGCATCATTTGGTTTTTACA+TGG | + | chr1.3:23279762-23279781 | MS.gene99525:intron | 30.0% |
| !!! | GACTAACATACTCTTGTTTT+GGG | + | chr1.3:23284589-23284608 | MS.gene99525:intron | 30.0% |
| !!! | GTTTCATTTTTTCCTCCTTT+AGG | - | chr1.3:23280817-23280836 | None:intergenic | 30.0% |
| !!! | TTTTGGAATACCTTAACATC+TGG | + | chr1.3:23281932-23281951 | MS.gene99525:intron | 30.0% |
| !!! | TTTTTCCCTTTTGTTTTGGT+TGG | + | chr1.3:23281079-23281098 | MS.gene99525:intron | 30.0% |
| AAAATGGCATTGTAAACAGG+AGG | - | chr1.3:23282821-23282840 | None:intergenic | 35.0% | |
| AAACGTCACTAAAGTCAACA+AGG | + | chr1.3:23279071-23279090 | MS.gene99525:CDS | 35.0% | |
| AAAGATTGTCTTCCAGAAGT+GGG | - | chr1.3:23280115-23280134 | None:intergenic | 35.0% | |
| AAAGCTGTATATTACGCTTC+AGG | - | chr1.3:23283859-23283878 | None:intergenic | 35.0% | |
| AAATACCTTTCACCAGGAAT+AGG | - | chr1.3:23281577-23281596 | None:intergenic | 35.0% | |
| AACAAGAGGAGAAATACATG+TGG | + | chr1.3:23280834-23280853 | MS.gene99525:CDS | 35.0% | |
| AACAGTAAATACCTTTCACC+AGG | - | chr1.3:23281583-23281602 | None:intergenic | 35.0% | |
| AACTCAGAACTCGTTATGTT+GGG | - | chr1.3:23280419-23280438 | None:intergenic | 35.0% | |
| AACTGTTCTGATTTATTGCC+TGG | - | chr1.3:23279138-23279157 | None:intergenic | 35.0% | |
| AACTTAACGACGCTATGATT+TGG | - | chr1.3:23279873-23279892 | None:intergenic | 35.0% | |
| AATTAACCCTTTGTCTGTTC+TGG | - | chr1.3:23280286-23280305 | None:intergenic | 35.0% | |
| ACAAGAGGAGAAATACATGT+GGG | + | chr1.3:23280835-23280854 | MS.gene99525:CDS | 35.0% | |
| ACACAGACACAAATGACAAA+GGG | - | chr1.3:23283168-23283187 | None:intergenic | 35.0% | |
| ACCTGATAGAATCTTTACCA+AGG | - | chr1.3:23282775-23282794 | None:intergenic | 35.0% | |
| ACTTGTTCACCAAGAAGTTA+TGG | - | chr1.3:23281606-23281625 | None:intergenic | 35.0% | |
| AGCCATATAAAACGTGTGAT+AGG | + | chr1.3:23279927-23279946 | MS.gene99525:intron | 35.0% | |
| AGTGGGAAAACGATATTGTA+AGG | - | chr1.3:23280098-23280117 | None:intergenic | 35.0% | |
| ATCAGCTTCTTGTGCATTAA+TGG | + | chr1.3:23281102-23281121 | MS.gene99525:intron | 35.0% | |
| ATCTTACATGGGATTGGATA+AGG | + | chr1.3:23279898-23279917 | MS.gene99525:intron | 35.0% | |
| ATGATATTCCTTTGTCAGCA+AGG | + | chr1.3:23278686-23278705 | MS.gene99525:CDS | 35.0% | |
| ATTAAACCAGCAAGGAATCA+CGG | - | chr1.3:23282740-23282759 | None:intergenic | 35.0% | |
| CAAATCTCAAAACCTATGTG+AGG | + | chr1.3:23278368-23278387 | MS.gene99525:CDS | 35.0% | |
| CAAATGATTGCAACCTGTTA+TGG | - | chr1.3:23283556-23283575 | None:intergenic | 35.0% | |
| CAATCTGTGCACATTAACAA+AGG | - | chr1.3:23283489-23283508 | None:intergenic | 35.0% | |
| CAGGTATGAAAATACAGTTG+AGG | + | chr1.3:23282790-23282809 | MS.gene99525:CDS | 35.0% | |
| CCACTTTCAAATGTTCAGAA+AGG | + | chr1.3:23278775-23278794 | MS.gene99525:CDS | 35.0% | |
| CCTGATAAAAACAAGAGAAG+AGG | - | chr1.3:23280784-23280803 | None:intergenic | 35.0% | |
| CCTTTCTGAACATTTGAAAG+TGG | - | chr1.3:23278778-23278797 | None:intergenic | 35.0% | |
| CTATAATCAGGCAAACAAAC+AGG | + | chr1.3:23283447-23283466 | MS.gene99525:CDS | 35.0% | |
| CTATATGTTATCTAGGGAAG+GGG | - | chr1.3:23282130-23282149 | None:intergenic | 35.0% | |
| CTCAATTGCATTCAGAAACA+AGG | + | chr1.3:23278182-23278201 | MS.gene99525:CDS | 35.0% | |
| CTCCTTAACATGAACATGAA+CGG | - | chr1.3:23278464-23278483 | None:intergenic | 35.0% | |
| CTCTCCTAATCAAATTCTAG+AGG | - | chr1.3:23283216-23283235 | None:intergenic | 35.0% | |
| CTGATCCAACCAAAACAAAA+GGG | - | chr1.3:23281087-23281106 | None:intergenic | 35.0% | |
| GAATTAACTTTGCGTTTGGT+TGG | + | chr1.3:23279832-23279851 | MS.gene99525:intron | 35.0% | |
| GATTTAAAAACTGTGGCACT+TGG | + | chr1.3:23284020-23284039 | MS.gene99525:CDS | 35.0% | |
| GGAAAATTGAAAAGACGCAT+TGG | + | chr1.3:23281499-23281518 | MS.gene99525:CDS | 35.0% | |
| GGAGGAAAAAATGAAACAAG+AGG | + | chr1.3:23280820-23280839 | MS.gene99525:CDS | 35.0% | |
| GGCATGCTTATTCATTCTTT+GGG | - | chr1.3:23279013-23279032 | None:intergenic | 35.0% | |
| GTATGAAAATACAGTTGAGG+TGG | + | chr1.3:23282793-23282812 | MS.gene99525:CDS | 35.0% | |
| GTATGCCGTATGATGATATT+AGG | - | chr1.3:23280075-23280094 | None:intergenic | 35.0% | |
| GTGGATAAATTTCTCATCAC+TGG | + | chr1.3:23283686-23283705 | MS.gene99525:intron | 35.0% | |
| GTGGGAAAACGATATTGTAA+GGG | - | chr1.3:23280097-23280116 | None:intergenic | 35.0% | |
| TACGTATATATAGAACCCGA+GGG | + | chr1.3:23284467-23284486 | MS.gene99525:intron | 35.0% | |
| TATATGTTATCTAGGGAAGG+GGG | - | chr1.3:23282129-23282148 | None:intergenic | 35.0% | |
| TATGCTAAATACTTGGAAGG+TGG | + | chr1.3:23282228-23282247 | MS.gene99525:intron | 35.0% | |
| TCCTTAACATGAACATGAAC+GGG | - | chr1.3:23278463-23278482 | None:intergenic | 35.0% | |
| TCCTTGGTAAAGATTCTATC+AGG | + | chr1.3:23282771-23282790 | MS.gene99525:CDS | 35.0% | |
| TCTCAATCACACATTACACT+TGG | - | chr1.3:23283914-23283933 | None:intergenic | 35.0% | |
| TGAGAAATTTATCCACACCA+TGG | - | chr1.3:23283682-23283701 | None:intergenic | 35.0% | |
| TGCATTAATGGAACTTGAGT+GGG | + | chr1.3:23281114-23281133 | MS.gene99525:intron | 35.0% | |
| TGCTGACACTTTGTAATTGT+AGG | + | chr1.3:23283753-23283772 | MS.gene99525:intron | 35.0% | |
| TGGCATGCTTATTCATTCTT+TGG | - | chr1.3:23279014-23279033 | None:intergenic | 35.0% | |
| TGTCTGAGCACTAATTTCAA+AGG | - | chr1.3:23283080-23283099 | None:intergenic | 35.0% | |
| TTACGTATATATAGAACCCG+AGG | + | chr1.3:23284466-23284485 | MS.gene99525:intron | 35.0% | |
| TTATCTAGTGGTCTCTTAAC+AGG | - | chr1.3:23278853-23278872 | None:intergenic | 35.0% | |
| TTTCTTAACAGAAGAATGCG+AGG | - | chr1.3:23278884-23278903 | None:intergenic | 35.0% | |
| ! | ACGGGCCAGTAATTTTTAAA+AGG | + | chr1.3:23278140-23278159 | MS.gene99525:CDS | 35.0% |
| ! | AGGAAAAGTATGAGAAAGCA+AGG | + | chr1.3:23281827-23281846 | MS.gene99525:CDS | 35.0% |
| ! | ATAAACCAATTTAAGACCGG+AGG | - | chr1.3:23282684-23282703 | None:intergenic | 35.0% |
| ! | GATTACTAGTCTGATTCTGA+TGG | - | chr1.3:23284311-23284330 | None:intergenic | 35.0% |
| ! | GATTTTCAGTAAAACTCTGC+TGG | + | chr1.3:23284625-23284644 | MS.gene99525:intron | 35.0% |
| ! | GCAAATTTTGAACTTCCTGA+AGG | - | chr1.3:23278397-23278416 | None:intergenic | 35.0% |
| ! | GGAAAAGTATGAGAAAGCAA+GGG | + | chr1.3:23281828-23281847 | MS.gene99525:CDS | 35.0% |
| ! | TAATCAAATTCTAGAGGTGG+CGG | - | chr1.3:23283210-23283229 | None:intergenic | 35.0% |
| ! | TCCTAATCAAATTCTAGAGG+TGG | - | chr1.3:23283213-23283232 | None:intergenic | 35.0% |
| ! | TGCCTATCACACGTTTTATA+TGG | - | chr1.3:23279932-23279951 | None:intergenic | 35.0% |
| ! | TTAATGCAGTTTGACTTCCT+TGG | + | chr1.3:23282755-23282774 | MS.gene99525:intron | 35.0% |
| !! | AACATAACGAGTTCTGAGTT+GGG | + | chr1.3:23280419-23280438 | MS.gene99525:intron | 35.0% |
| !! | AAGGAAGTTGATATGAACCT+AGG | + | chr1.3:23280582-23280601 | MS.gene99525:intron | 35.0% |
| !! | ACGAATTTGATGATGAAGAC+GGG | + | chr1.3:23278122-23278141 | MS.gene99525:CDS | 35.0% |
| !! | ATCATTGATTTGTGTGCTCT+TGG | + | chr1.3:23281676-23281695 | MS.gene99525:intron | 35.0% |
| !! | CACGAATTTGATGATGAAGA+CGG | + | chr1.3:23278121-23278140 | MS.gene99525:CDS | 35.0% |
| !! | CTTCATTGCGTTTTATTGTC+TGG | + | chr1.3:23282472-23282491 | MS.gene99525:intron | 35.0% |
| !! | GACAAAGGGTTAATTTTGGT+AGG | + | chr1.3:23280291-23280310 | MS.gene99525:intron | 35.0% |
| !! | GCAGAAAAAATGGACTACTT+TGG | + | chr1.3:23279194-23279213 | MS.gene99525:CDS | 35.0% |
| !! | TGAGATTTGTTGACAACAAC+AGG | - | chr1.3:23278652-23278671 | None:intergenic | 35.0% |
| !! | TGATTGGTGCCAAATTGAAA+AGG | + | chr1.3:23279661-23279680 | MS.gene99525:CDS | 35.0% |
| !! | TGTTGATGGTGTTAAAGAGA+AGG | + | chr1.3:23280862-23280881 | MS.gene99525:CDS | 35.0% |
| !!! | ATACTCCCTTTTGAAGCTTT+TGG | + | chr1.3:23280635-23280654 | MS.gene99525:intron | 35.0% |
| !!! | CCTCTTCTCTTGTTTTTATC+AGG | + | chr1.3:23280781-23280800 | MS.gene99525:intron | 35.0% |
| !!! | GACAACAGGAGTTGTTTTTT+TGG | - | chr1.3:23278593-23278612 | None:intergenic | 35.0% |
| !!! | GCCATTTTGAAGTTCCAAAA+AGG | + | chr1.3:23282833-23282852 | MS.gene99525:CDS | 35.0% |
| AACCTTCCAGAACAGACAAA+GGG | + | chr1.3:23280277-23280296 | MS.gene99525:intron | 40.0% | |
| AATGTCCTATTCCTGGTGAA+AGG | + | chr1.3:23281569-23281588 | MS.gene99525:CDS | 40.0% | |
| AATTCTGCACCCAGATGTTA+AGG | - | chr1.3:23281945-23281964 | None:intergenic | 40.0% | |
| ACAAGTTTGGGCAAAGAAAG+AGG | - | chr1.3:23280902-23280921 | None:intergenic | 40.0% | |
| ACGCAATGAAGAGATAGGAA+AGG | - | chr1.3:23282463-23282482 | None:intergenic | 40.0% | |
| ACTGACTGGAAGGTGATATT+GGG | + | chr1.3:23279587-23279606 | MS.gene99525:CDS | 40.0% | |
| AGAATTTGGAAACCATGGTG+TGG | + | chr1.3:23283667-23283686 | MS.gene99525:intron | 40.0% | |
| AGATAAACTACCTAGATCCC+AGG | + | chr1.3:23284051-23284070 | MS.gene99525:CDS | 40.0% | |
| AGCTGAAAACAGATTACGAC+AGG | + | chr1.3:23283788-23283807 | MS.gene99525:CDS | 40.0% | |
| AGGATGAAGATGAACAGTGA+CGG | + | chr1.3:23278565-23278584 | MS.gene99525:CDS | 40.0% | |
| AGGTTCCTATTGAAAAGGTC+TGG | + | chr1.3:23284102-23284121 | MS.gene99525:intron | 40.0% | |
| ATATTCCTTTGTCAGCAAGG+CGG | + | chr1.3:23278689-23278708 | MS.gene99525:CDS | 40.0% | |
| ATCAGGTAAAAAACCTAGCG+AGG | + | chr1.3:23282928-23282947 | MS.gene99525:intron | 40.0% | |
| ATCTTCATCCTAGCACTCAA+TGG | - | chr1.3:23278556-23278575 | None:intergenic | 40.0% | |
| ATTCCTGAATGTCCTATTCC+TGG | + | chr1.3:23281562-23281581 | MS.gene99525:CDS | 40.0% | |
| CAAACTGCATTAAACCAGCA+AGG | - | chr1.3:23282748-23282767 | None:intergenic | 40.0% | |
| CAACTCAGAACTCGTTATGT+TGG | - | chr1.3:23280420-23280439 | None:intergenic | 40.0% | |
| CAAGTTTGGGCAAAGAAAGA+GGG | - | chr1.3:23280901-23280920 | None:intergenic | 40.0% | |
| CACACAGACACAAATGACAA+AGG | - | chr1.3:23283169-23283188 | None:intergenic | 40.0% | |
| CACATTATATGCAGTCATGC+GGG | + | chr1.3:23279520-23279539 | MS.gene99525:CDS | 40.0% | |
| CCACATTATATGCAGTCATG+CGG | + | chr1.3:23279519-23279538 | MS.gene99525:CDS | 40.0% | |
| CGGTATATGTTATACTCCCT+CGG | - | chr1.3:23284486-23284505 | None:intergenic | 40.0% | |
| CGTTCATGTTCATGTTAAGG+AGG | + | chr1.3:23278462-23278481 | MS.gene99525:CDS | 40.0% | |
| CTTAACGACCTCAGTCTAAT+AGG | - | chr1.3:23282890-23282909 | None:intergenic | 40.0% | |
| GAAAGATTGTCTTCCAGAAG+TGG | - | chr1.3:23280116-23280135 | None:intergenic | 40.0% | |
| GACTGGTAAAATTGCAAGCT+TGG | - | chr1.3:23280397-23280416 | None:intergenic | 40.0% | |
| GATTACGACAGGGCAAAAAA+AGG | + | chr1.3:23283799-23283818 | MS.gene99525:CDS | 40.0% | |
| GCTGAAAACAGATTACGACA+GGG | + | chr1.3:23283789-23283808 | MS.gene99525:CDS | 40.0% | |
| GCTGATCCAACCAAAACAAA+AGG | - | chr1.3:23281088-23281107 | None:intergenic | 40.0% | |
| GGAATAGGACATTCAGGAAT+TGG | - | chr1.3:23281562-23281581 | None:intergenic | 40.0% | |
| GGGATCTAGGTAGTTTATCT+TGG | - | chr1.3:23284051-23284070 | None:intergenic | 40.0% | |
| GGGGTAAAGATGCTCTATAA+GGG | + | chr1.3:23279258-23279277 | MS.gene99525:CDS | 40.0% | |
| GGGTAAAGATGCTCTATAAG+GGG | + | chr1.3:23279259-23279278 | MS.gene99525:CDS | 40.0% | |
| GGTATATGTTATACTCCCTC+GGG | - | chr1.3:23284485-23284504 | None:intergenic | 40.0% | |
| GTAATTGTAGGCTCTTTCGA+AGG | + | chr1.3:23283765-23283784 | MS.gene99525:intron | 40.0% | |
| GTAGAAAATGTGACTGCAGA+AGG | + | chr1.3:23282597-23282616 | MS.gene99525:CDS | 40.0% | |
| GTGCATTAATGGAACTTGAG+TGG | + | chr1.3:23281113-23281132 | MS.gene99525:intron | 40.0% | |
| TAAGGTTGTCTCAACCTCTA+AGG | + | chr1.3:23278297-23278316 | MS.gene99525:CDS | 40.0% | |
| TAGCATTAATTGACGGAGCT+GGG | - | chr1.3:23278921-23278940 | None:intergenic | 40.0% | |
| TATACCCACAGAAGATTCCA+CGG | - | chr1.3:23278329-23278348 | None:intergenic | 40.0% | |
| TCAACTTCTCATAGTCACGA+TGG | + | chr1.3:23278208-23278227 | MS.gene99525:CDS | 40.0% | |
| TCCCGTTCATGTTCATGTTA+AGG | + | chr1.3:23278459-23278478 | MS.gene99525:CDS | 40.0% | |
| TCTAAAGACCAAACGGAACT+TGG | + | chr1.3:23283831-23283850 | MS.gene99525:CDS | 40.0% | |
| TGACAATTCCTTCTTGGGAA+GGG | + | chr1.3:23281012-23281031 | MS.gene99525:intron | 40.0% | |
| TGAGATTTCTTGACGACAAC+AGG | - | chr1.3:23278607-23278626 | None:intergenic | 40.0% | |
| TGGGGGACTACATCAAAAAA+CGG | - | chr1.3:23284506-23284525 | None:intergenic | 40.0% | |
| TGGGGTAAAGATGCTCTATA+AGG | + | chr1.3:23279257-23279276 | MS.gene99525:CDS | 40.0% | |
| TTAGCATTAATTGACGGAGC+TGG | - | chr1.3:23278922-23278941 | None:intergenic | 40.0% | |
| TTGACAATTCCTTCTTGGGA+AGG | + | chr1.3:23281011-23281030 | MS.gene99525:intron | 40.0% | |
| TTGTCAAAAAGTTCCTCGCT+AGG | - | chr1.3:23282944-23282963 | None:intergenic | 40.0% | |
| ! | AAACTTTTGGACTGACTGGA+AGG | + | chr1.3:23279577-23279596 | MS.gene99525:CDS | 40.0% |
| ! | AAGCTTCAAAAGGGAGTATG+AGG | - | chr1.3:23280634-23280653 | None:intergenic | 40.0% |
| ! | AAGTTCCGTTTGGTCTTTAG+AGG | - | chr1.3:23283832-23283851 | None:intergenic | 40.0% |
| ! | AATCAAATTCTAGAGGTGGC+GGG | - | chr1.3:23283209-23283228 | None:intergenic | 40.0% |
| ! | AGAAGGTGACAACAAGTTGA+AGG | + | chr1.3:23282614-23282633 | MS.gene99525:CDS | 40.0% |
| ! | AGATAGGAAAGGCATATGCT+TGG | - | chr1.3:23282452-23282471 | None:intergenic | 40.0% |
| ! | AGGAAAACTTTTGGACTGAC+TGG | + | chr1.3:23279573-23279592 | MS.gene99525:CDS | 40.0% |
| ! | ATAGAGCATCTTTACCCCAT+GGG | - | chr1.3:23279256-23279275 | None:intergenic | 40.0% |
| ! | ATTTAAGACCGGAGGCAAAA+AGG | - | chr1.3:23282676-23282695 | None:intergenic | 40.0% |
| ! | CAATATCGTTTTCCCACTTC+TGG | + | chr1.3:23280100-23280119 | MS.gene99525:intron | 40.0% |
| ! | CACACTGTTTTCAATCCTCT+TGG | - | chr1.3:23282362-23282381 | None:intergenic | 40.0% |
| ! | CTTTGTCATTTGTGTCTGTG+TGG | + | chr1.3:23283167-23283186 | MS.gene99525:intron | 40.0% |
| ! | GAAGTCCAGACCTTTTCAAT+AGG | - | chr1.3:23284110-23284129 | None:intergenic | 40.0% |
| ! | GAGGAATCAGTCTTATCTAG+TGG | - | chr1.3:23278865-23278884 | None:intergenic | 40.0% |
| ! | GGATTTGTTCCGGTTAATAC+AGG | + | chr1.3:23280671-23280690 | MS.gene99525:intron | 40.0% |
| ! | TACATGTGGGCTATTGTTGA+TGG | + | chr1.3:23280848-23280867 | MS.gene99525:CDS | 40.0% |
| ! | TATAGAGCATCTTTACCCCA+TGG | - | chr1.3:23279257-23279276 | None:intergenic | 40.0% |
| ! | TCTGCTGGAAAAGTTTGCTT+GGG | + | chr1.3:23284640-23284659 | MS.gene99525:CDS | 40.0% |
| ! | TGGACTACTTTGGTTCACAA+TGG | + | chr1.3:23279204-23279223 | MS.gene99525:CDS | 40.0% |
| ! | TGTCACCTCTAAAGACCAAA+CGG | + | chr1.3:23283824-23283843 | MS.gene99525:CDS | 40.0% |
| ! | TTGTTTGTCCTTTTTGCCTC+CGG | + | chr1.3:23282665-23282684 | MS.gene99525:intron | 40.0% |
| ! | TTTTGCCTCCGGTCTTAAAT+TGG | + | chr1.3:23282676-23282695 | MS.gene99525:intron | 40.0% |
| !! | AAGACTTTTGCTGTCAGGTT+GGG | - | chr1.3:23283010-23283029 | None:intergenic | 40.0% |
| !! | CAAAGTTCTAGCTCACAGAA+CGG | + | chr1.3:23278274-23278293 | MS.gene99525:CDS | 40.0% |
| !! | CAACATAACGAGTTCTGAGT+TGG | + | chr1.3:23280418-23280437 | MS.gene99525:intron | 40.0% |
| !! | CGTGCTGTTTCAAAATCTCA+CGG | + | chr1.3:23283586-23283605 | MS.gene99525:CDS | 40.0% |
| !! | GCCACCTCTAGAATTTGATT+AGG | + | chr1.3:23283209-23283228 | MS.gene99525:intron | 40.0% |
| !! | TTGCTTATTTTCCGGAAGCT+AGG | + | chr1.3:23284278-23284297 | MS.gene99525:intron | 40.0% |
| !!! | AATTTTAGAGCTGAACCACC+AGG | + | chr1.3:23281288-23281307 | MS.gene99525:CDS | 40.0% |
| !!! | AGTCCCCCAAATGTTGTTTT+TGG | + | chr1.3:23284517-23284536 | MS.gene99525:intron | 40.0% |
| AATCCTACCTCCTCTTGTTC+AGG | - | chr1.3:23279303-23279322 | None:intergenic | 45.0% | |
| ACAGGACAGGCAAGTTCTTT+CGG | - | chr1.3:23280139-23280158 | None:intergenic | 45.0% | |
| ACTAAACTTCCTCCAAGCTC+CGG | + | chr1.3:23279165-23279184 | MS.gene99525:CDS | 45.0% | |
| AGAACTCGTTATGTTGGGAC+TGG | - | chr1.3:23280414-23280433 | None:intergenic | 45.0% | |
| AGTTTGCGCTGGAGTATGAT+TGG | + | chr1.3:23280323-23280342 | MS.gene99525:intron | 45.0% | |
| ATCATACTCCAGCGCAAACT+CGG | - | chr1.3:23280323-23280342 | None:intergenic | 45.0% | |
| ATCCTACCTCCTCTTGTTCA+GGG | - | chr1.3:23279302-23279321 | None:intergenic | 45.0% | |
| ATCGGTGAAATCTGAACCGA+AGG | + | chr1.3:23278948-23278967 | MS.gene99525:CDS | 45.0% | |
| CAACCTTCCAGAACAGACAA+AGG | + | chr1.3:23280276-23280295 | MS.gene99525:intron | 45.0% | |
| CAACTGATATCCTGGGATCT+AGG | - | chr1.3:23284064-23284083 | None:intergenic | 45.0% | |
| CAGTTACTTGGTTGGCGTAT+TGG | + | chr1.3:23281728-23281747 | MS.gene99525:CDS | 45.0% | |
| CCGCATGACTGCATATAATG+TGG | - | chr1.3:23279522-23279541 | None:intergenic | 45.0% | |
| CGCTGGAGTATGATTGGATT+TGG | + | chr1.3:23280329-23280348 | MS.gene99525:intron | 45.0% | |
| CGTTCTGTGAGCTAGAACTT+TGG | - | chr1.3:23278276-23278295 | None:intergenic | 45.0% | |
| CTCTTAACAGGCAGTGTAGA+CGG | - | chr1.3:23278841-23278860 | None:intergenic | 45.0% | |
| CTTCTCATAGTCACGATGGA+CGG | + | chr1.3:23278212-23278231 | MS.gene99525:CDS | 45.0% | |
| GAAATCTGAACCGAAGGTTG+CGG | + | chr1.3:23278954-23278973 | MS.gene99525:CDS | 45.0% | |
| GAACTTTGGCCATTTGCAGA+AGG | - | chr1.3:23278262-23278281 | None:intergenic | 45.0% | |
| GACTGACTGGAAGGTGATAT+TGG | + | chr1.3:23279586-23279605 | MS.gene99525:CDS | 45.0% | |
| GAGCTAGTAGTTCTTGGAAG+GGG | + | chr1.3:23281794-23281813 | MS.gene99525:CDS | 45.0% | |
| GCACGAGGTTCCTATTGAAA+AGG | + | chr1.3:23284097-23284116 | MS.gene99525:CDS | 45.0% | |
| GGAGCTAGTAGTTCTTGGAA+GGG | + | chr1.3:23281793-23281812 | MS.gene99525:CDS | 45.0% | |
| TAATGACCGTGATTCCTTGC+TGG | + | chr1.3:23282731-23282750 | MS.gene99525:intron | 45.0% | |
| TCACCAGGAATAGGACATTC+AGG | - | chr1.3:23281568-23281587 | None:intergenic | 45.0% | |
| TCAGGAGAAAAAGGCCCTAA+AGG | + | chr1.3:23280799-23280818 | MS.gene99525:intron | 45.0% | |
| TGAAGAATCCGAAGACGAGA+TGG | + | chr1.3:23278522-23278541 | MS.gene99525:CDS | 45.0% | |
| TGTCTGTGTGGCGTTAATGT+TGG | + | chr1.3:23283179-23283198 | MS.gene99525:intron | 45.0% | |
| ! | AACCCTTTGTCTGTTCTGGA+AGG | - | chr1.3:23280282-23280301 | None:intergenic | 45.0% |
| ! | ATCAAATTCTAGAGGTGGCG+GGG | - | chr1.3:23283208-23283227 | None:intergenic | 45.0% |
| ! | CGAGGAACTTTTTGACAAGC+TGG | + | chr1.3:23282946-23282965 | MS.gene99525:CDS | 45.0% |
| ! | CTCTGCTGGAAAAGTTTGCT+TGG | + | chr1.3:23284639-23284658 | MS.gene99525:CDS | 45.0% |
| ! | GGAAAAGTTTGCTTGGGCAA+TGG | + | chr1.3:23284646-23284665 | MS.gene99525:CDS | 45.0% |
| ! | TAGAGCATCTTTACCCCATG+GGG | - | chr1.3:23279255-23279274 | None:intergenic | 45.0% |
| ! | TTCTGGGAGCTAGTAGTTCT+TGG | + | chr1.3:23281788-23281807 | MS.gene99525:CDS | 45.0% |
| !! | ATTGGATTTGGTGTCTCAGC+AGG | + | chr1.3:23280341-23280360 | MS.gene99525:intron | 45.0% |
| !! | GAAGACTTTTGCTGTCAGGT+TGG | - | chr1.3:23283011-23283030 | None:intergenic | 45.0% |
| !! | TACGGAAGACTTTTGCTGTC+AGG | - | chr1.3:23283015-23283034 | None:intergenic | 45.0% |
| !! | TTCTAGCTCACAGAACGGTA+AGG | + | chr1.3:23278279-23278298 | MS.gene99525:CDS | 45.0% |
| !! | TTGGATTTGGTGTCTCAGCA+GGG | + | chr1.3:23280342-23280361 | MS.gene99525:intron | 45.0% |
| !!! | CCATTTTTTCTGCCCATCAC+CGG | - | chr1.3:23279187-23279206 | None:intergenic | 45.0% |
| AACTTCACTTGAGTGCCACC+TGG | - | chr1.3:23280168-23280187 | None:intergenic | 50.0% | |
| ACTTCACTTGAGTGCCACCT+GGG | - | chr1.3:23280167-23280186 | None:intergenic | 50.0% | |
| AGCGGTTCACAGCACAATGT+GGG | + | chr1.3:23280943-23280962 | MS.gene99525:intron | 50.0% | |
| ATCCCAGGATATCAGTTGCC+TGG | + | chr1.3:23284066-23284085 | MS.gene99525:CDS | 50.0% | |
| ATCTGCCGTGGAATCTTCTG+TGG | + | chr1.3:23278321-23278340 | MS.gene99525:CDS | 50.0% | |
| ATGGGAAGCAACCTAGCTTC+CGG | - | chr1.3:23284292-23284311 | None:intergenic | 50.0% | |
| ATTTGTGTGCTCTTGGCAGC+TGG | + | chr1.3:23281683-23281702 | MS.gene99525:intron | 50.0% | |
| CACCAGGCAACTGATATCCT+GGG | - | chr1.3:23284071-23284090 | None:intergenic | 50.0% | |
| CAGGACAGGCAAGTTCTTTC+GGG | - | chr1.3:23280138-23280157 | None:intergenic | 50.0% | |
| GACTTTGACCCCTGAACAAG+AGG | + | chr1.3:23279290-23279309 | MS.gene99525:CDS | 50.0% | |
| GATGCTCTATAAGGGGAAGC+CGG | + | chr1.3:23279266-23279285 | MS.gene99525:CDS | 50.0% | |
| GCGACTGCAAACTGAATGCT+TGG | - | chr1.3:23280198-23280217 | None:intergenic | 50.0% | |
| GGAGAAAAAGGCCCTAAAGG+AGG | + | chr1.3:23280802-23280821 | MS.gene99525:intron | 50.0% | |
| GGGAGCTAGTAGTTCTTGGA+AGG | + | chr1.3:23281792-23281811 | MS.gene99525:CDS | 50.0% | |
| GTTCAGAAAGGACAGCAGCA+TGG | + | chr1.3:23278787-23278806 | MS.gene99525:CDS | 50.0% | |
| TATCAGTTGCCTGGTGCAAG+CGG | + | chr1.3:23284075-23284094 | MS.gene99525:CDS | 50.0% | |
| TCCTACCTCCTCTTGTTCAG+GGG | - | chr1.3:23279301-23279320 | None:intergenic | 50.0% | |
| TCTCTAGTCCCTTCCCAAGA+AGG | - | chr1.3:23281023-23281042 | None:intergenic | 50.0% | |
| TCTGCCGTGGAATCTTCTGT+GGG | + | chr1.3:23278322-23278341 | MS.gene99525:CDS | 50.0% | |
| TGTTCAGGGGTCAAAGTCAC+CGG | - | chr1.3:23279288-23279307 | None:intergenic | 50.0% | |
| TTCAGGAGCCAAGTTCCGTT+TGG | - | chr1.3:23283842-23283861 | None:intergenic | 50.0% | |
| TTGGAAGGGGCAAAGTGACA+AGG | + | chr1.3:23281807-23281826 | MS.gene99525:CDS | 50.0% | |
| TTTACCCCATGGGGCTTGTA+AGG | - | chr1.3:23279246-23279265 | None:intergenic | 50.0% | |
| TTTGACCCCTGAACAAGAGG+AGG | + | chr1.3:23279293-23279312 | MS.gene99525:CDS | 50.0% | |
| ! | ATTTGCAGAAGGCACGTCAG+GGG | - | chr1.3:23278251-23278270 | None:intergenic | 50.0% |
| ! | CATTTGCAGAAGGCACGTCA+GGG | - | chr1.3:23278252-23278271 | None:intergenic | 50.0% |
| ! | TTTGAGGGCTGGCAATGAGA+AGG | + | chr1.3:23282065-23282084 | MS.gene99525:CDS | 50.0% |
| !! | ACGAGTTCTGAGTTGGGTTC+AGG | + | chr1.3:23280425-23280444 | MS.gene99525:intron | 50.0% |
| !! | CCGGTGATGGGCAGAAAAAA+TGG | + | chr1.3:23279184-23279203 | MS.gene99525:CDS | 50.0% |
| !! | GACAAACTAGCTTTGAGGGC+TGG | + | chr1.3:23282054-23282073 | MS.gene99525:CDS | 50.0% |
| !! | TGAGAAAGCAAGGGCGTTGA+AGG | + | chr1.3:23281837-23281856 | MS.gene99525:CDS | 50.0% |
| !!! | GGTTTTTTCCGAGTTTGCGC+TGG | + | chr1.3:23280312-23280331 | MS.gene99525:intron | 50.0% |
| ACCCCTGAACAAGAGGAGGT+AGG | + | chr1.3:23279297-23279316 | MS.gene99525:intron | 55.0% | |
| ACCTATGTGAGGTCCCCTTC+AGG | + | chr1.3:23278379-23278398 | MS.gene99525:CDS | 55.0% | |
| ACCTCCTTACAAGCCCCATG+GGG | + | chr1.3:23279239-23279258 | MS.gene99525:CDS | 55.0% | |
| ATCTGAACCGAAGGTTGCGG+AGG | + | chr1.3:23278957-23278976 | MS.gene99525:CDS | 55.0% | |
| CACCTCCTTACAAGCCCCAT+GGG | + | chr1.3:23279238-23279257 | MS.gene99525:CDS | 55.0% | |
| CAGCAGCATGGCTCCAATGT+TGG | + | chr1.3:23278799-23278818 | MS.gene99525:CDS | 55.0% | |
| CAGCGGTTCACAGCACAATG+TGG | + | chr1.3:23280942-23280961 | MS.gene99525:intron | 55.0% | |
| CATGGGGCTTGTAAGGAGGT+GGG | - | chr1.3:23279239-23279258 | None:intergenic | 55.0% | |
| CCTGACGTGCCTTCTGCAAA+TGG | + | chr1.3:23278250-23278269 | MS.gene99525:CDS | 55.0% | |
| GACGAAGCTGCTGACACAGT+TGG | + | chr1.3:23282558-23282577 | MS.gene99525:CDS | 55.0% | |
| GCACCAGGCAACTGATATCC+TGG | - | chr1.3:23284072-23284091 | None:intergenic | 55.0% | |
| TCATCCACCTCCGCAACCTT+CGG | - | chr1.3:23278967-23278986 | None:intergenic | 55.0% | |
| TCCTGAAGGGGACCTCACAT+AGG | - | chr1.3:23278383-23278402 | None:intergenic | 55.0% | |
| TGTAGCCGCCTTGCTGACAA+AGG | - | chr1.3:23278697-23278716 | None:intergenic | 55.0% | |
| TTCCACGGCAGATGCCTTAG+AGG | - | chr1.3:23278314-23278333 | None:intergenic | 55.0% | |
| TTCCTCCAAGCTCCGGTGAT+GGG | + | chr1.3:23279172-23279191 | MS.gene99525:CDS | 55.0% | |
| ! | CCATTTGCAGAAGGCACGTC+AGG | - | chr1.3:23278253-23278272 | None:intergenic | 55.0% |
| !! | AACCTCTAAGGCATCTGCCG+TGG | + | chr1.3:23278309-23278328 | MS.gene99525:CDS | 55.0% |
| ACCCCATGGGGCTTGTAAGG+AGG | - | chr1.3:23279243-23279262 | None:intergenic | 60.0% | |
| CCACCTCCTTACAAGCCCCA+TGG | + | chr1.3:23279237-23279256 | MS.gene99525:CDS | 60.0% | |
| CCATGGGGCTTGTAAGGAGG+TGG | - | chr1.3:23279240-23279259 | None:intergenic | 60.0% | |
| CTTCCTCCAAGCTCCGGTGA+TGG | + | chr1.3:23279171-23279190 | MS.gene99525:CDS | 60.0% | |
| GAACCACCAGGACTGTTCCG+TGG | + | chr1.3:23281300-23281319 | MS.gene99525:CDS | 60.0% | |
| TCACTTGAGTGCCACCTGGG+AGG | - | chr1.3:23280164-23280183 | None:intergenic | 60.0% | |
| TGAACCGAAGGTTGCGGAGG+TGG | + | chr1.3:23278960-23278979 | MS.gene99525:CDS | 60.0% | |
| TGGGATGCTCTCCACGTCCA+CGG | - | chr1.3:23281320-23281339 | None:intergenic | 60.0% | |
| TTCTGCCCATCACCGGAGCT+TGG | - | chr1.3:23279180-23279199 | None:intergenic | 60.0% | |
| !! | TGGACGTGGAGAGCATCCCA+AGG | + | chr1.3:23281320-23281339 | MS.gene99525:CDS | 60.0% |
| AGTGCCACCTGGGAGGACAC+AGG | - | chr1.3:23280157-23280176 | None:intergenic | 65.0% | |
| CACCTGGGAGGACACAGGAC+AGG | - | chr1.3:23280152-23280171 | None:intergenic | 65.0% | |
| CCACGTCCACGGAACAGTCC+TGG | - | chr1.3:23281309-23281328 | None:intergenic | 65.0% | |
| CCAGGACTGTTCCGTGGACG+TGG | + | chr1.3:23281306-23281325 | MS.gene99525:CDS | 65.0% | |
| CGTCCACGGAACAGTCCTGG+TGG | - | chr1.3:23281306-23281325 | None:intergenic | 65.0% | |
| CTGTCCTGTGTCCTCCCAGG+TGG | + | chr1.3:23280150-23280169 | MS.gene99525:intron | 65.0% | |
| TGCCCATCACCGGAGCTTGG+AGG | - | chr1.3:23279177-23279196 | None:intergenic | 65.0% | |
| TGCCTGTCCTGTGTCCTCCC+AGG | + | chr1.3:23280147-23280166 | MS.gene99525:intron | 65.0% | |
| !! | AACCTCGTGCCGCTTGCACC+AGG | - | chr1.3:23284087-23284106 | None:intergenic | 65.0% |
| TGCCTGGTGCAAGCGGCACG+AGG | + | chr1.3:23284082-23284101 | MS.gene99525:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 23278115 | 23284694 | 23278115 | ID=MS.gene99525 |
| chr1.3 | mRNA | 23278115 | 23284694 | 23278115 | ID=MS.gene99525.t1;Parent=MS.gene99525 |
| chr1.3 | exon | 23278115 | 23279314 | 23278115 | ID=MS.gene99525.t1.exon1;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23278115 | 23279314 | 23278115 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23279515 | 23279709 | 23279515 | ID=MS.gene99525.t1.exon2;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23279515 | 23279709 | 23279515 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23280803 | 23280883 | 23280803 | ID=MS.gene99525.t1.exon3;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23280803 | 23280883 | 23280803 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23281282 | 23281341 | 23281282 | ID=MS.gene99525.t1.exon4;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23281282 | 23281341 | 23281282 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23281496 | 23281590 | 23281496 | ID=MS.gene99525.t1.exon5;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23281496 | 23281590 | 23281496 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23281702 | 23281858 | 23281702 | ID=MS.gene99525.t1.exon6;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23281702 | 23281858 | 23281702 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23281961 | 23282086 | 23281961 | ID=MS.gene99525.t1.exon7;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23281961 | 23282086 | 23281961 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23282552 | 23282635 | 23282552 | ID=MS.gene99525.t1.exon8;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23282552 | 23282635 | 23282552 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23282764 | 23282854 | 23282764 | ID=MS.gene99525.t1.exon9;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23282764 | 23282854 | 23282764 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23282933 | 23283066 | 23282933 | ID=MS.gene99525.t1.exon10;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23282933 | 23283066 | 23282933 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23283400 | 23283468 | 23283400 | ID=MS.gene99525.t1.exon11;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23283400 | 23283468 | 23283400 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23283562 | 23283651 | 23283562 | ID=MS.gene99525.t1.exon12;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23283562 | 23283651 | 23283562 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23283775 | 23283863 | 23283775 | ID=MS.gene99525.t1.exon13;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23283775 | 23283863 | 23283775 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23283950 | 23284118 | 23283950 | ID=MS.gene99525.t1.exon14;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23283950 | 23284118 | 23283950 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| chr1.3 | exon | 23284626 | 23284694 | 23284626 | ID=MS.gene99525.t1.exon15;Parent=MS.gene99525.t1 |
| chr1.3 | CDS | 23284626 | 23284694 | 23284626 | ID=cds.MS.gene99525.t1;Parent=MS.gene99525.t1 |
| Gene Sequence |
| Protein sequence |
