AlfalfaGEDB | MS.gene20960

M. sativa cultivar XinJiangDaYe / MS.gene20960

KEGG: K09422
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20960.t1	XP_003591261.1	97	370	8	3	1	368	1	369	1.70E-198	701.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20960.t1	Q8VZQ2	48.7	394	148	9	1	368	1	366	8.6e-87	322.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20960.t1	G7IAD1	97.0	370	8	3	1	368	1	369	1.2e-198	701.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene20960.t1	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051651	MS.gene20960	0.806045	9.96E-50	-1.69E-46
MS.gene052129	MS.gene20960	0.831193	1.92E-55	-1.69E-46
MS.gene054633	MS.gene20960	0.805463	1.32E-49	-1.69E-46
MS.gene055251	MS.gene20960	0.820448	6.82E-53	-1.69E-46
MS.gene056526	MS.gene20960	0.823473	1.36E-53	-1.69E-46
MS.gene056694	MS.gene20960	0.811326	7.41E-51	-1.69E-46
MS.gene05732	MS.gene20960	0.818984	1.47E-52	-1.69E-46
MS.gene058334	MS.gene20960	0.806405	8.36E-50	-1.69E-46
MS.gene05926	MS.gene20960	0.828595	8.24E-55	-1.69E-46
MS.gene059304	MS.gene20960	0.840885	6.64E-58	-1.69E-46
MS.gene06093	MS.gene20960	0.813205	2.88E-51	-1.69E-46
MS.gene061044	MS.gene20960	0.816284	5.99E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20960.t1	MTR_1g085040	97.568	370	6	3	1	368	1	369	0.0	733
MS.gene20960.t1	MTR_7g111290	57.072	403	115	21	1	368	1	380	4.37e-117	345
MS.gene20960.t1	MTR_7g110830	48.312	385	163	8	1	367	1	367	5.57e-103	308
MS.gene20960.t1	MTR_1g085640	50.372	403	145	17	1	365	1	386	1.89e-102	308
MS.gene20960.t1	MTR_4g105130	71.951	164	44	1	1	162	1	164	1.82e-82	256
MS.gene20960.t1	MTR_7g111290	51.524	361	117	21	43	368	1	338	3.68e-79	246
MS.gene20960.t1	MTR_1g112760	60.680	206	68	4	3	204	4	200	1.26e-77	238
MS.gene20960.t1	MTR_3g077110	82.946	129	22	0	1	129	1	129	1.03e-76	240
MS.gene20960.t1	MTR_8g017440	72.388	134	31	1	1	128	1	134	3.64e-69	221
MS.gene20960.t1	MTR_2g099740	72.180	133	37	0	1	133	1	133	4.36e-69	222
MS.gene20960.t1	MTR_2g064160	70.769	130	37	1	1	130	1	129	2.04e-67	215
MS.gene20960.t1	MTR_8g017540	75.610	123	30	0	1	123	47	169	4.42e-67	217
MS.gene20960.t1	MTR_8g017500	73.984	123	32	0	1	123	1	123	1.09e-66	214
MS.gene20960.t1	MTR_4g073420	53.039	181	81	1	1	181	1	177	1.08e-63	205
MS.gene20960.t1	MTR_7g076740	62.252	151	55	2	1	149	1	151	4.26e-63	204
MS.gene20960.t1	MTR_8g098860	72.034	118	33	0	1	118	1	118	1.03e-62	203
MS.gene20960.t1	MTR_6g012690	62.987	154	50	2	1	154	1	147	1.17e-62	204
MS.gene20960.t1	MTR_8g095390	68.217	129	41	0	1	129	1	129	1.87e-62	202
MS.gene20960.t1	MTR_4g478180	67.969	128	41	0	1	128	2	129	1.95e-62	204
MS.gene20960.t1	MTR_3g074520	64.394	132	47	0	1	132	1	132	2.61e-62	203
MS.gene20960.t1	MTR_7g011170	68.939	132	41	0	1	132	1	132	4.26e-62	201
MS.gene20960.t1	MTR_3g097450	65.649	131	45	0	1	131	1	131	4.43e-62	201
MS.gene20960.t1	MTR_8g017390	76.068	117	27	1	1	116	1	117	1.36e-61	205
MS.gene20960.t1	MTR_4g082230	69.531	128	39	0	1	128	1	128	1.66e-61	203
MS.gene20960.t1	MTR_5g078140	66.923	130	43	0	1	130	1	130	1.74e-61	200
MS.gene20960.t1	MTR_4g082290	70.312	128	38	0	1	128	1	128	4.07e-61	202
MS.gene20960.t1	MTR_8g031360	68.182	132	40	2	1	130	1	132	6.42e-61	198
MS.gene20960.t1	MTR_5g079670	65.600	125	43	0	3	127	2	126	7.13e-61	195
MS.gene20960.t1	MTR_8g017340	71.774	124	34	1	1	123	1	124	8.66e-61	203
MS.gene20960.t1	MTR_3g065440	66.923	130	43	0	1	130	1	130	2.49e-60	197
MS.gene20960.t1	MTR_5g029840	64.122	131	47	0	1	131	1	131	2.52e-60	197
MS.gene20960.t1	MTR_5g010020	74.545	110	28	0	1	110	1	110	3.98e-60	197
MS.gene20960.t1	MTR_1g100653	69.748	119	36	0	1	119	1	119	1.30e-59	194
MS.gene20960.t1	MTR_4g065017	80.374	107	21	0	11	117	16	122	1.45e-59	196
MS.gene20960.t1	MTR_8g017350	70.968	124	35	1	1	123	1	124	1.60e-59	203
MS.gene20960.t1	MTR_2g097910	79.245	106	22	0	12	117	20	125	1.80e-59	195
MS.gene20960.t1	MTR_4g102380	64.122	131	47	0	1	131	1	131	6.54e-59	192
MS.gene20960.t1	MTR_5g007370	68.333	120	38	0	12	131	12	131	1.26e-58	192
MS.gene20960.t1	MTR_2g011660	65.891	129	43	1	1	128	1	129	1.68e-58	193
MS.gene20960.t1	MTR_3g028740	78.899	109	23	0	9	117	19	127	1.97e-58	193
MS.gene20960.t1	MTR_2g089620	67.969	128	41	0	1	128	1	128	2.09e-58	192
MS.gene20960.t1	MTR_6g009430	52.047	171	78	2	1	169	1	169	3.26e-58	192
MS.gene20960.t1	MTR_3g461490	54.878	164	70	1	1	160	1	164	8.53e-58	191
MS.gene20960.t1	MTR_4g091490	65.116	129	44	1	1	128	1	129	8.89e-58	192
MS.gene20960.t1	MTR_4g485530	64.286	126	45	0	1	126	1	126	1.60e-56	183
MS.gene20960.t1	MTR_1g100667	72.269	119	32	1	9	127	10	127	1.24e-55	183
MS.gene20960.t1	MTR_1g076150	68.067	119	38	0	1	119	1	119	1.98e-55	182
MS.gene20960.t1	MTR_6g055910	64.444	135	47	1	9	142	11	145	5.72e-54	179
MS.gene20960.t1	MTR_1g043050	67.241	116	38	0	1	116	1	116	4.52e-53	176
MS.gene20960.t1	MTR_3g083540	62.903	124	46	0	6	129	35	158	1.53e-52	176
MS.gene20960.t1	MTR_7g115650	60.331	121	48	0	1	121	1	121	1.64e-52	173
MS.gene20960.t1	MTR_1g043080	66.379	116	39	0	1	116	1	116	2.04e-52	174
MS.gene20960.t1	MTR_5g042030	65.546	119	41	0	12	130	7	125	6.80e-52	174
MS.gene20960.t1	MTR_7g096930	64.407	118	42	0	1	118	1	118	1.05e-51	174
MS.gene20960.t1	MTR_4g125520	61.864	118	45	0	1	118	1	118	4.35e-50	170
MS.gene20960.t1	MTR_2g089450	62.931	116	43	0	1	116	1	116	4.91e-50	168
MS.gene20960.t1	MTR_4g121460	65.517	116	40	0	1	116	1	116	8.65e-50	170
MS.gene20960.t1	MTR_0251s0050	61.538	117	45	0	5	121	6	122	9.43e-50	168
MS.gene20960.t1	MTR_2g034790	48.901	182	87	3	1	182	1	176	5.04e-49	168
MS.gene20960.t1	MTR_8g027345	61.345	119	46	0	1	119	1	119	7.38e-49	167
MS.gene20960.t1	MTR_0008s0390	63.964	111	40	0	5	115	6	116	1.41e-48	165
MS.gene20960.t1	MTR_1g017000	51.852	135	61	2	1	134	1	132	2.69e-48	164
MS.gene20960.t1	MTR_2g067420	64.220	109	39	0	2	110	4	112	3.24e-48	166
MS.gene20960.t1	MTR_1g017140	46.512	172	83	2	1	163	1	172	5.28e-48	166
MS.gene20960.t1	MTR_7g117730	60.684	117	46	0	1	117	1	117	7.84e-48	163
MS.gene20960.t1	MTR_5g014990	44.809	183	96	3	1	182	1	179	1.60e-47	164
MS.gene20960.t1	MTR_7g010210	59.664	119	48	0	1	119	1	119	2.19e-47	164
MS.gene20960.t1	MTR_4g057635	62.393	117	43	1	1	116	1	117	3.73e-47	163
MS.gene20960.t1	MTR_7g010210	59.664	119	48	0	1	119	1	119	3.74e-47	161
MS.gene20960.t1	MTR_3g103570	59.829	117	46	1	1	116	1	117	9.38e-47	162
MS.gene20960.t1	MTR_2g089420	63.636	110	40	0	7	116	6	115	9.39e-47	165
MS.gene20960.t1	MTR_0008s0470	59.483	116	46	1	1	115	1	116	1.08e-46	161
MS.gene20960.t1	MTR_2g095520	63.964	111	39	1	1	110	1	111	8.56e-46	159
MS.gene20960.t1	MTR_7g087130	48.466	163	73	2	1	161	1	154	1.86e-45	159
MS.gene20960.t1	MTR_0140s0030	47.059	170	81	3	1	164	2	168	2.11e-45	159
MS.gene20960.t1	MTR_0489s0020	47.059	170	81	3	1	164	2	168	2.11e-45	159
MS.gene20960.t1	MTR_4g097570	62.727	110	40	1	1	109	1	110	7.90e-45	156
MS.gene20960.t1	MTR_7g102110	58.974	117	47	1	1	116	1	117	9.06e-45	155
MS.gene20960.t1	MTR_3g039990	58.475	118	49	0	1	118	2	119	9.09e-45	156
MS.gene20960.t1	MTR_6g090405	58.621	116	47	1	1	115	1	116	3.06e-44	153
MS.gene20960.t1	MTR_3g052430	63.551	107	39	0	12	118	41	147	3.42e-44	160
MS.gene20960.t1	MTR_3g052450	62.617	107	40	0	12	118	40	146	5.45e-44	159
MS.gene20960.t1	MTR_4g097570	62.162	111	40	2	1	109	1	111	6.50e-44	154
MS.gene20960.t1	MTR_6g012180	60.909	110	43	0	1	110	1	110	1.27e-43	154
MS.gene20960.t1	MTR_7g035075	57.025	121	50	1	1	119	1	121	1.27e-43	150
MS.gene20960.t1	MTR_1g073170	61.261	111	43	0	5	115	13	123	1.35e-43	152
MS.gene20960.t1	MTR_0008s0280	61.321	106	41	0	9	114	9	114	1.68e-43	150
MS.gene20960.t1	MTR_1g045610	58.772	114	47	0	4	117	13	126	3.30e-43	150
MS.gene20960.t1	MTR_1g110460	53.659	123	57	0	11	133	25	147	5.84e-43	152
MS.gene20960.t1	MTR_6g006030	60.185	108	43	0	11	118	13	120	6.18e-43	149
MS.gene20960.t1	MTR_0063s0090	61.905	105	40	0	9	113	9	113	7.59e-43	149
MS.gene20960.t1	MTR_7g109320	63.793	116	42	0	1	116	1	116	2.61e-42	151
MS.gene20960.t1	MTR_4g128670	58.559	111	45	1	1	110	1	111	5.92e-42	150
MS.gene20960.t1	MTR_1g086530	55.172	116	52	0	12	127	33	148	1.29e-41	147
MS.gene20960.t1	MTR_8g042410	61.321	106	41	0	12	117	37	142	2.03e-41	152
MS.gene20960.t1	MTR_3g011610	59.434	106	43	0	12	117	37	142	4.14e-41	151
MS.gene20960.t1	MTR_3g045430	51.128	133	64	1	1	132	1	133	1.06e-40	145
MS.gene20960.t1	MTR_4g100720	60.748	107	42	0	9	115	10	116	1.11e-40	141
MS.gene20960.t1	MTR_1g021230	61.321	106	41	0	12	117	57	162	1.48e-40	148
MS.gene20960.t1	MTR_8g020490	58.716	109	45	0	10	118	6	114	1.81e-40	143
MS.gene20960.t1	MTR_1g062940	47.853	163	69	4	12	173	6	153	2.42e-40	142
MS.gene20960.t1	MTR_1g086510	57.018	114	49	0	12	125	21	134	9.39e-40	142
MS.gene20960.t1	MTR_2g088170	62.264	106	40	0	12	117	29	134	5.57e-38	142
MS.gene20960.t1	MTR_4g063100	55.660	106	47	0	13	118	8	113	1.70e-37	135
MS.gene20960.t1	MTR_5g079120	51.724	116	56	0	9	124	58	173	4.30e-37	136
MS.gene20960.t1	MTR_0197s0010	58.000	100	42	0	17	116	6	105	6.21e-37	133
MS.gene20960.t1	MTR_5g078800	57.143	105	45	0	12	116	7	111	1.74e-36	133
MS.gene20960.t1	MTR_5g079290	54.286	105	48	0	12	116	17	121	4.12e-36	132
MS.gene20960.t1	MTR_5g079220	52.727	110	52	0	7	116	16	125	4.16e-36	132
MS.gene20960.t1	MTR_0247s0040	56.863	102	44	0	12	113	7	108	5.95e-36	129
MS.gene20960.t1	MTR_5g078910	54.206	107	49	0	10	116	5	111	6.17e-36	133
MS.gene20960.t1	MTR_2g096380	51.402	107	52	0	9	115	3	109	1.14e-35	130
MS.gene20960.t1	MTR_2g033170	54.310	116	53	0	12	127	24	139	3.30e-35	132
MS.gene20960.t1	MTR_7g017260	46.377	138	60	2	12	147	25	150	5.51e-35	129
MS.gene20960.t1	MTR_0193s0090	52.586	116	54	1	12	127	7	121	1.26e-34	127
MS.gene20960.t1	MTR_1g083630	47.368	152	67	3	11	156	11	155	1.46e-34	134
MS.gene20960.t1	MTR_5g088640	51.786	112	52	2	13	123	13	123	1.50e-34	128
MS.gene20960.t1	MTR_5g088080	51.786	112	52	2	13	123	13	123	1.52e-34	128
MS.gene20960.t1	MTR_5g088150	51.786	112	52	2	13	123	13	123	1.52e-34	128
MS.gene20960.t1	MTR_5g488210	51.786	112	52	2	13	123	13	123	1.52e-34	128
MS.gene20960.t1	MTR_5g078860	54.286	105	48	0	12	116	7	111	1.55e-34	129
MS.gene20960.t1	MTR_5g488170	51.786	112	52	2	13	123	13	123	1.98e-34	127
MS.gene20960.t1	MTR_8g060940	56.436	101	44	0	12	112	7	107	2.27e-34	127
MS.gene20960.t1	MTR_5g078930	55.340	103	46	0	13	115	10	112	3.25e-34	126
MS.gene20960.t1	MTR_5g078950	52.885	104	49	0	10	113	5	108	4.03e-34	127
MS.gene20960.t1	MTR_0001s0360	53.333	105	49	0	12	116	7	111	7.63e-34	126
MS.gene20960.t1	MTR_5g062790	50.893	112	53	2	13	123	10	120	1.29e-33	127
MS.gene20960.t1	MTR_4g123040	53.448	116	54	0	12	127	24	139	1.51e-33	127
MS.gene20960.t1	MTR_8g006470	51.818	110	52	1	9	117	7	116	1.22e-32	124
MS.gene20960.t1	MTR_4g029540	42.581	155	84	3	12	164	10	161	2.09e-32	123
MS.gene20960.t1	MTR_6g055910	58.416	101	41	1	43	142	16	116	2.54e-32	122
MS.gene20960.t1	MTR_5g007300	65.000	80	28	0	9	88	61	140	4.95e-32	117
MS.gene20960.t1	MTR_5g088610	50.000	112	54	2	13	123	10	120	3.37e-31	121
MS.gene20960.t1	MTR_3g463400	44.928	138	70	4	12	145	131	266	1.98e-30	121
MS.gene20960.t1	MTR_4g019370	44.667	150	64	5	14	158	38	173	1.24e-29	117
MS.gene20960.t1	MTR_4g063100	63.158	76	28	0	43	118	9	84	1.60e-29	114
MS.gene20960.t1	MTR_5g016510	50.427	117	55	2	14	129	5	119	1.65e-29	116
MS.gene20960.t1	MTR_4g094982	52.941	102	47	1	14	115	5	105	4.84e-28	111
MS.gene20960.t1	MTR_5g070020	33.929	224	108	8	12	226	120	312	6.06e-28	112
MS.gene20960.t1	MTR_1g085880	52.252	111	51	2	10	118	9	119	1.46e-27	107
MS.gene20960.t1	MTR_1g085770	36.967	211	121	5	10	214	9	213	3.80e-27	109
MS.gene20960.t1	MTR_2g096380	60.274	73	29	0	43	115	18	90	9.42e-27	106
MS.gene20960.t1	MTR_7g061330	49.533	107	51	2	11	116	110	214	1.64e-26	110
MS.gene20960.t1	MTR_7g461410	49.533	107	51	2	11	116	110	214	1.64e-26	110
MS.gene20960.t1	MTR_7g061330	49.533	107	51	2	11	116	74	178	2.76e-26	110
MS.gene20960.t1	MTR_3g101290	51.961	102	48	1	14	115	37	137	4.93e-26	104
MS.gene20960.t1	MTR_1g057980	46.000	100	53	1	12	111	78	176	7.27e-26	105
MS.gene20960.t1	MTR_4g128190	48.077	104	40	2	12	114	11	101	7.78e-26	104
MS.gene20960.t1	MTR_5g049190	47.525	101	50	2	9	108	14	112	7.98e-26	104
MS.gene20960.t1	MTR_3g110028	47.664	107	53	2	11	116	82	186	1.72e-25	108
MS.gene20960.t1	MTR_6g015455	52.427	103	46	2	14	115	5	105	2.65e-25	108
MS.gene20960.t1	MTR_8g017480	80.769	52	10	0	1	52	1	52	3.61e-25	97.1
MS.gene20960.t1	MTR_3g077650	44.660	103	54	2	14	115	181	281	5.66e-25	105
MS.gene20960.t1	MTR_7g035350	43.590	117	61	3	14	129	225	337	1.36e-24	104
MS.gene20960.t1	MTR_6g027360	43.119	109	59	2	11	118	75	181	1.40e-24	102
MS.gene20960.t1	MTR_1g026870	45.794	107	55	2	11	116	82	186	4.39e-24	104
MS.gene20960.t1	MTR_6g074860	43.396	106	57	2	14	118	4	107	5.08e-24	99.4
MS.gene20960.t1	MTR_5g041570	42.202	109	60	2	11	118	131	237	5.89e-24	102
MS.gene20960.t1	MTR_4g082040	43.396	106	57	2	14	118	105	208	7.52e-24	102
MS.gene20960.t1	MTR_7g451170	42.718	103	56	2	14	115	191	291	7.65e-24	102
MS.gene20960.t1	MTR_4g105660	43.689	103	55	2	14	115	180	280	1.29e-23	101
MS.gene20960.t1	MTR_6g027340	41.509	106	59	2	14	118	16	119	1.44e-23	97.4
MS.gene20960.t1	MTR_5g082910	50.000	100	47	2	14	112	19	116	1.74e-23	99.0
MS.gene20960.t1	MTR_7g037260	40.196	102	60	1	14	115	145	245	2.91e-23	99.8
MS.gene20960.t1	MTR_4g088015	40.594	101	59	1	14	114	221	320	1.22e-22	99.0
MS.gene20960.t1	MTR_3g089045	43.396	106	57	2	14	118	16	119	6.76e-22	94.7
MS.gene20960.t1	MTR_7g037130	38.182	110	64	2	14	120	145	253	1.69e-21	94.7
MS.gene20960.t1	MTR_5g010650	45.455	99	51	2	12	109	108	204	2.59e-21	95.5
MS.gene20960.t1	MTR_6g027370	40.566	106	60	2	14	118	99	202	1.35e-20	92.0
MS.gene20960.t1	MTR_7g450950	35.780	109	66	2	14	119	157	264	1.85e-20	91.7
MS.gene20960.t1	MTR_7g086960	36.691	139	83	3	8	143	83	219	6.61e-20	90.1
MS.gene20960.t1	MTR_0023s0210	49.351	77	39	0	12	88	7	83	2.24e-19	82.0
MS.gene20960.t1	MTR_7g061550	39.048	105	62	1	17	119	10	114	2.59e-18	85.5
MS.gene20960.t1	MTR_5g038910	36.190	105	66	1	17	121	29	132	4.40e-17	82.4
MS.gene20960.t1	MTR_5g038910	36.190	105	66	1	17	121	29	132	4.44e-17	82.8
MS.gene20960.t1	MTR_8g468380	35.088	114	72	2	17	130	25	136	3.00e-16	80.1
MS.gene20960.t1	MTR_6g055910	50.000	74	36	1	70	142	2	75	1.42e-14	72.4
MS.gene20960.t1	MTR_4g063100	60.870	46	18	0	73	118	4	49	5.51e-13	67.4
MS.gene20960.t1	MTR_2g096380	58.140	43	18	0	73	115	4	46	2.23e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20960.t1	AT1G09540	47.188	409	132	11	1	368	1	366	1.20e-111	330
MS.gene20960.t1	AT1G57560	49.731	372	125	14	1	368	1	314	3.13e-98	294
MS.gene20960.t1	AT1G57560	69.430	193	46	2	1	187	1	186	1.36e-89	271
MS.gene20960.t1	AT4G01680	81.290	155	28	1	1	154	1	155	3.08e-89	269
MS.gene20960.t1	AT4G01680	46.556	363	142	8	1	343	1	331	3.71e-89	272
MS.gene20960.t1	AT5G26660	69.022	184	53	2	1	180	1	184	1.14e-87	268
MS.gene20960.t1	AT4G01680	45.067	375	142	9	1	343	1	343	8.32e-86	264
MS.gene20960.t1	AT3G12720	72.222	126	34	1	1	126	12	136	1.82e-68	218
MS.gene20960.t1	AT3G13890	79.310	116	24	0	1	116	1	116	2.83e-67	216
MS.gene20960.t1	AT3G61250	69.767	129	39	0	1	129	1	129	7.31e-65	208
MS.gene20960.t1	AT3G13890	73.600	125	24	1	1	116	1	125	4.66e-64	208
MS.gene20960.t1	AT4G12350	52.764	199	77	4	1	194	1	187	5.53e-64	206
MS.gene20960.t1	AT1G63910	68.750	128	40	0	1	128	1	128	1.01e-63	207
MS.gene20960.t1	AT1G66230	59.877	162	62	1	1	162	1	159	2.60e-63	204
MS.gene20960.t1	AT5G15310	62.338	154	52	1	1	154	1	148	7.79e-63	204
MS.gene20960.t1	AT5G15310	62.338	154	52	1	1	154	1	148	8.65e-63	203
MS.gene20960.t1	AT5G15310	62.338	154	52	1	1	154	1	148	1.98e-62	200
MS.gene20960.t1	AT5G16600	68.421	133	42	0	1	133	1	133	3.44e-62	202
MS.gene20960.t1	AT3G01140	68.939	132	41	0	1	132	1	132	1.21e-61	201
MS.gene20960.t1	AT4G22680	62.069	145	53	1	1	143	1	145	1.24e-61	199
MS.gene20960.t1	AT4G34990	61.268	142	55	0	1	142	1	142	2.09e-61	199
MS.gene20960.t1	AT3G02940	64.122	131	47	0	1	131	1	131	2.13e-61	200
MS.gene20960.t1	AT3G02940	64.122	131	47	0	1	131	1	131	4.66e-61	199
MS.gene20960.t1	AT3G02940	64.122	131	47	0	1	131	1	131	4.66e-61	199
MS.gene20960.t1	AT1G34670	64.394	132	47	0	1	132	1	132	5.57e-61	200
MS.gene20960.t1	AT5G10280	64.394	132	47	0	1	132	1	132	6.15e-61	199
MS.gene20960.t1	AT2G16720	63.158	133	49	0	1	133	1	133	6.32e-61	197
MS.gene20960.t1	AT5G65230	66.412	131	44	0	1	131	1	131	7.96e-61	198
MS.gene20960.t1	AT1G22640	63.359	131	48	0	1	131	1	131	1.02e-60	196
MS.gene20960.t1	AT5G16770	63.359	131	48	0	1	131	1	131	2.57e-60	197
MS.gene20960.t1	AT5G16770	63.359	131	48	0	1	131	1	131	2.57e-60	197
MS.gene20960.t1	AT4G38620	63.359	131	48	0	1	131	1	131	2.66e-60	196
MS.gene20960.t1	AT4G05100	65.891	129	43	1	1	128	1	129	5.89e-60	196
MS.gene20960.t1	AT5G16770	63.359	131	48	0	1	131	1	131	5.95e-60	197
MS.gene20960.t1	AT5G16770	63.359	131	48	0	1	131	1	131	5.95e-60	197
MS.gene20960.t1	AT4G21440	65.625	128	44	0	1	128	1	128	9.59e-60	197
MS.gene20960.t1	AT4G28110	65.625	128	44	0	1	128	1	128	9.86e-60	194
MS.gene20960.t1	AT4G09460	48.404	188	81	1	1	188	1	172	2.94e-59	192
MS.gene20960.t1	AT3G01140	71.311	122	35	0	6	127	49	170	9.28e-59	195
MS.gene20960.t1	AT5G56110	64.394	132	47	0	1	132	1	132	1.84e-58	192
MS.gene20960.t1	AT5G12870	76.147	109	26	0	10	118	16	124	4.24e-58	190
MS.gene20960.t1	AT4G17785	64.341	129	45	1	1	128	1	129	6.89e-58	192
MS.gene20960.t1	AT4G17785	64.341	129	45	1	1	128	1	129	8.72e-58	192
MS.gene20960.t1	AT5G60890	61.240	129	50	0	1	129	1	129	1.23e-57	189
MS.gene20960.t1	AT5G14340	61.364	132	51	0	1	132	13	144	2.60e-57	188
MS.gene20960.t1	AT5G61420	61.194	134	52	0	1	134	1	134	3.22e-57	191
MS.gene20960.t1	AT5G07690	60.432	139	55	0	1	139	1	139	3.69e-57	189
MS.gene20960.t1	AT1G74430	65.625	128	44	0	1	128	1	128	1.30e-56	186
MS.gene20960.t1	AT3G08500	71.795	117	30	1	4	117	19	135	3.13e-56	187
MS.gene20960.t1	AT1G35515	60.305	131	52	0	1	131	1	131	3.24e-56	183
MS.gene20960.t1	AT1G06180	68.908	119	37	0	1	119	1	119	1.55e-55	182
MS.gene20960.t1	AT5G62320	50.538	186	59	4	2	155	3	187	3.16e-55	182
MS.gene20960.t1	AT1G18570	61.832	131	49	1	1	130	1	131	6.38e-55	184
MS.gene20960.t1	AT3G28470	63.636	132	48	0	1	132	1	132	8.24e-55	183
MS.gene20960.t1	AT5G07700	60.769	130	51	0	1	130	1	130	9.84e-55	183
MS.gene20960.t1	AT5G07700	60.769	130	51	0	1	130	1	130	9.84e-55	183
MS.gene20960.t1	AT3G23250	43.318	217	101	3	1	199	1	213	1.12e-54	181
MS.gene20960.t1	AT5G54230	64.062	128	46	0	1	128	1	128	1.12e-54	182
MS.gene20960.t1	AT2G31180	58.042	143	57	1	1	140	1	143	5.77e-54	178
MS.gene20960.t1	AT3G13540	62.097	124	47	0	6	129	17	140	5.83e-54	178
MS.gene20960.t1	AT1G74080	61.240	129	50	0	1	129	1	129	1.07e-53	180
MS.gene20960.t1	AT1G56160	67.826	115	37	0	2	116	4	118	4.01e-53	178
MS.gene20960.t1	AT1G18710	57.534	146	55	1	1	146	1	139	6.46e-53	176
MS.gene20960.t1	AT1G79180	66.949	118	39	0	2	119	4	121	1.62e-52	176
MS.gene20960.t1	AT1G16490	52.532	158	71	1	2	155	4	161	6.40e-51	171
MS.gene20960.t1	AT5G26660	88.235	85	10	0	45	129	14	98	1.31e-50	172
MS.gene20960.t1	AT3G48920	67.925	106	34	0	9	114	15	120	3.91e-49	166
MS.gene20960.t1	AT5G52260	69.369	111	34	0	9	119	9	119	8.91e-49	166
MS.gene20960.t1	AT3G12820	64.035	114	41	0	3	116	5	118	3.17e-48	163
MS.gene20960.t1	AT2G47460	57.576	132	56	0	1	132	1	132	1.77e-47	165
MS.gene20960.t1	AT5G23000	61.538	117	44	1	1	116	1	117	2.09e-47	164
MS.gene20960.t1	AT5G62470	51.266	158	62	2	1	155	1	146	5.76e-47	163
MS.gene20960.t1	AT5G49330	62.931	116	43	0	1	116	1	116	7.84e-47	163
MS.gene20960.t1	AT4G25560	65.179	112	39	0	8	119	6	117	8.28e-47	161
MS.gene20960.t1	AT5G57620	60.684	117	45	1	1	116	1	117	1.00e-46	162
MS.gene20960.t1	AT3G47600	59.322	118	48	0	1	118	1	118	1.25e-46	162
MS.gene20960.t1	AT3G62610	61.207	116	45	0	1	116	1	116	1.33e-46	162
MS.gene20960.t1	AT3G49690	61.538	117	44	1	1	116	1	117	1.48e-46	161
MS.gene20960.t1	AT5G65790	60.684	117	45	1	1	116	1	117	2.09e-46	162
MS.gene20960.t1	AT1G74650	62.069	116	44	0	1	116	1	116	2.51e-46	161
MS.gene20960.t1	AT1G08810	51.220	164	73	3	1	162	1	159	3.34e-46	159
MS.gene20960.t1	AT1G79180	52.318	151	39	1	2	119	4	154	1.39e-45	159
MS.gene20960.t1	AT5G62470	51.266	158	61	3	1	155	1	145	3.95e-45	159
MS.gene20960.t1	AT2G36890	55.906	127	55	1	1	126	1	127	8.56e-45	156
MS.gene20960.t1	AT2G36890	55.906	127	55	1	1	126	42	168	1.06e-44	157
MS.gene20960.t1	AT5G14750	60.577	104	41	0	13	116	17	120	1.56e-44	152
MS.gene20960.t1	AT5G06100	64.151	106	38	0	12	117	32	137	1.88e-44	159
MS.gene20960.t1	AT4G37780	58.974	117	47	1	1	116	1	117	1.95e-44	155
MS.gene20960.t1	AT3G27810	58.559	111	46	0	11	121	19	129	2.05e-44	153
MS.gene20960.t1	AT5G35550	64.815	108	38	0	9	116	11	118	2.32e-44	154
MS.gene20960.t1	AT3G01530	60.185	108	43	0	12	119	25	132	3.62e-44	152
MS.gene20960.t1	AT3G28910	54.264	129	57	1	1	129	1	127	8.16e-44	154
MS.gene20960.t1	AT5G06100	64.151	106	38	0	12	117	32	137	9.67e-44	159
MS.gene20960.t1	AT5G06100	64.151	106	38	0	12	117	32	137	9.67e-44	159
MS.gene20960.t1	AT5G06100	64.151	106	38	0	12	117	32	137	9.67e-44	159
MS.gene20960.t1	AT5G06100	64.151	106	38	0	12	117	32	137	9.67e-44	159
MS.gene20960.t1	AT5G40350	50.714	140	59	1	11	140	16	155	1.82e-43	150
MS.gene20960.t1	AT5G40330	59.615	104	42	0	13	116	13	116	2.98e-43	150
MS.gene20960.t1	AT3G11440	61.321	106	41	0	12	117	41	146	8.39e-43	155
MS.gene20960.t1	AT3G27920	57.009	107	46	0	10	116	12	118	1.20e-42	148
MS.gene20960.t1	AT5G55020	62.617	107	40	0	12	118	26	132	3.41e-42	154
MS.gene20960.t1	AT2G26960	58.407	113	46	1	9	121	17	128	3.50e-42	152
MS.gene20960.t1	AT5G52600	52.239	134	55	2	9	133	9	142	3.67e-42	146
MS.gene20960.t1	AT3G11440	61.321	106	41	0	12	117	41	146	3.95e-42	155
MS.gene20960.t1	AT3G11440	61.321	106	41	0	12	117	41	146	3.95e-42	155
MS.gene20960.t1	AT3G11440	61.321	106	41	0	12	117	41	146	3.95e-42	155
MS.gene20960.t1	AT1G68320	55.285	123	55	0	10	132	17	139	5.24e-42	149
MS.gene20960.t1	AT4G13480	63.810	105	38	0	13	117	7	111	5.27e-42	148
MS.gene20960.t1	AT3G24310	62.857	105	39	0	13	117	19	123	7.08e-42	147
MS.gene20960.t1	AT1G25340	55.833	120	53	0	13	132	19	138	1.66e-41	147
MS.gene20960.t1	AT3G30210	46.667	165	86	1	13	175	28	192	2.17e-41	147
MS.gene20960.t1	AT2G32460	59.259	108	44	0	10	117	16	123	4.68e-41	150
MS.gene20960.t1	AT2G32460	59.259	108	44	0	10	117	4	111	6.11e-41	150
MS.gene20960.t1	AT2G47190	37.811	201	111	1	12	198	20	220	1.38e-40	144
MS.gene20960.t1	AT4G26930	59.813	107	43	0	12	118	19	125	3.10e-40	146
MS.gene20960.t1	AT1G48000	55.652	115	51	0	11	125	31	145	4.24e-40	142
MS.gene20960.t1	AT5G59780	53.636	110	51	0	9	118	5	114	6.31e-37	134
MS.gene20960.t1	AT1G25340	53.333	120	51	1	13	132	19	133	1.12e-36	134
MS.gene20960.t1	AT3G53200	55.140	107	48	0	9	115	6	112	1.62e-36	132
MS.gene20960.t1	AT3G06490	56.034	116	51	0	12	127	19	134	1.80e-36	135
MS.gene20960.t1	AT1G25340	53.333	120	51	1	13	132	19	133	2.11e-36	134
MS.gene20960.t1	AT3G46130	54.717	106	48	0	13	118	10	115	2.25e-36	133
MS.gene20960.t1	AT2G26950	48.696	115	56	1	6	120	10	121	2.96e-35	133
MS.gene20960.t1	AT5G49620	54.310	116	53	0	12	127	26	141	5.96e-35	130
MS.gene20960.t1	AT1G66370	55.769	104	46	0	12	115	8	111	1.01e-34	128
MS.gene20960.t1	AT3G60460	51.818	110	52	1	9	117	8	117	9.42e-33	124
MS.gene20960.t1	AT1G66380	58.654	104	43	0	12	115	8	111	1.41e-32	119
MS.gene20960.t1	AT1G56650	51.667	120	50	1	12	123	8	127	1.73e-31	119
MS.gene20960.t1	AT5G49620	48.462	130	53	1	12	127	26	155	2.21e-31	121
MS.gene20960.t1	AT5G35550	72.973	74	20	0	43	116	48	121	4.64e-31	119
MS.gene20960.t1	AT1G66390	56.604	106	46	0	10	115	6	111	8.81e-31	118
MS.gene20960.t1	AT3G27810	61.039	77	30	0	45	121	4	80	1.18e-30	115
MS.gene20960.t1	AT3G12820	72.464	69	19	0	48	116	2	70	1.55e-30	115
MS.gene20960.t1	AT5G14750	68.116	69	22	0	48	116	18	86	5.94e-30	113
MS.gene20960.t1	AT5G40350	50.000	106	43	1	45	140	5	110	1.70e-29	112
MS.gene20960.t1	AT3G47600	53.684	95	40	1	24	118	22	112	1.24e-28	114
MS.gene20960.t1	AT3G46130	62.667	75	28	0	44	118	9	83	1.71e-28	111
MS.gene20960.t1	AT1G22640	62.162	74	28	0	58	131	1	74	2.16e-28	110
MS.gene20960.t1	AT3G46130	63.514	74	27	0	45	118	20	93	4.27e-28	110
MS.gene20960.t1	AT5G59780	63.514	74	27	0	45	118	20	93	4.78e-28	109
MS.gene20960.t1	AT3G53200	64.789	71	25	0	45	115	9	79	1.18e-27	108
MS.gene20960.t1	AT5G58850	37.725	167	85	6	12	163	103	265	4.22e-27	111
MS.gene20960.t1	AT1G18960	43.802	121	61	4	14	132	10	125	5.62e-27	108
MS.gene20960.t1	AT4G37260	51.852	108	49	2	14	120	13	118	7.08e-27	108
MS.gene20960.t1	AT3G27785	45.370	108	56	2	9	115	184	289	7.94e-27	110
MS.gene20960.t1	AT5G40360	43.519	108	59	2	9	116	153	258	2.36e-26	108
MS.gene20960.t1	AT5G11050	44.660	103	54	2	14	115	105	205	5.44e-26	108
MS.gene20960.t1	AT4G18770	44.954	109	57	2	9	116	212	318	6.07e-26	108
MS.gene20960.t1	AT5G02320	47.664	107	53	2	11	116	124	228	1.68e-25	108
MS.gene20960.t1	AT5G02320	47.664	107	53	2	11	116	124	228	1.68e-25	108
MS.gene20960.t1	AT5G02320	47.664	107	53	2	11	116	64	168	1.77e-25	107
MS.gene20960.t1	AT2G23290	51.456	103	47	2	14	115	13	113	1.85e-25	105
MS.gene20960.t1	AT1G71030	55.844	77	34	0	51	127	5	81	2.23e-25	101
MS.gene20960.t1	AT3G09230	50.000	104	49	2	14	116	55	156	2.52e-25	106
MS.gene20960.t1	AT1G71030	55.844	77	34	0	51	127	19	95	2.60e-25	101
MS.gene20960.t1	AT5G67300	49.515	103	49	2	14	115	6	106	3.18e-25	104
MS.gene20960.t1	AT2G39880	52.427	103	46	2	14	115	50	150	3.67e-25	105
MS.gene20960.t1	AT3G09370	48.571	105	51	2	12	115	128	230	5.13e-25	106
MS.gene20960.t1	AT3G09370	48.571	105	51	2	12	115	133	235	5.91e-25	106
MS.gene20960.t1	AT3G09370	48.571	105	51	2	12	115	141	243	9.37e-25	105
MS.gene20960.t1	AT5G11510	46.729	107	54	2	11	116	78	182	1.02e-24	106
MS.gene20960.t1	AT5G11510	46.729	107	54	2	11	116	78	182	1.02e-24	106
MS.gene20960.t1	AT5G11510	46.729	107	54	2	11	116	78	182	1.02e-24	106
MS.gene20960.t1	AT3G55730	52.427	103	46	2	14	115	56	156	1.10e-24	104
MS.gene20960.t1	AT1G73410	45.794	107	55	2	14	119	6	110	1.50e-24	100
MS.gene20960.t1	AT1G17950	45.283	106	55	2	14	118	5	108	1.57e-24	101
MS.gene20960.t1	AT5G11510	46.729	107	54	2	11	116	78	182	1.58e-24	105
MS.gene20960.t1	AT3G50060	43.651	126	64	4	14	138	6	125	1.65e-24	102
MS.gene20960.t1	AT5G11510	46.729	107	54	2	11	116	78	182	1.70e-24	105
MS.gene20960.t1	AT3G23250	68.333	60	19	0	58	117	1	60	2.94e-24	99.8
MS.gene20960.t1	AT1G69560	41.441	111	62	2	9	118	102	210	3.10e-24	102
MS.gene20960.t1	AT1G69560	41.441	111	62	2	9	118	118	226	3.79e-24	102
MS.gene20960.t1	AT1G73410	45.794	107	55	2	14	119	6	110	6.43e-24	98.2
MS.gene20960.t1	AT1G26780	42.593	108	59	2	12	118	96	201	1.76e-23	99.0
MS.gene20960.t1	AT1G26780	42.593	108	59	2	12	118	96	201	2.46e-23	100
MS.gene20960.t1	AT4G32730	44.860	107	56	2	11	116	84	188	2.90e-23	102
MS.gene20960.t1	AT4G32730	44.860	107	56	2	11	116	84	188	2.90e-23	102
MS.gene20960.t1	AT4G32730	44.860	107	56	2	11	116	84	188	2.90e-23	102
MS.gene20960.t1	AT4G32730	44.860	107	56	2	11	116	84	188	2.90e-23	102
MS.gene20960.t1	AT4G32730	44.860	107	56	2	11	116	84	188	2.93e-23	102
MS.gene20960.t1	AT1G66380	58.442	77	32	0	39	115	2	78	2.73e-22	90.9
MS.gene20960.t1	AT2G25230	41.593	113	63	2	9	120	21	131	4.49e-22	94.0
MS.gene20960.t1	AT4G33450	38.739	111	65	2	9	118	14	122	1.37e-21	93.2
MS.gene20960.t1	AT5G17800	40.566	106	62	1	14	119	93	197	1.43e-21	94.4
MS.gene20960.t1	AT5G14750	62.712	59	22	0	58	116	1	59	4.36e-21	88.6
MS.gene20960.t1	AT5G14750	62.712	59	22	0	58	116	1	59	4.36e-21	88.6
MS.gene20960.t1	AT1G66380	54.217	83	38	0	10	92	6	88	7.73e-21	87.0
MS.gene20960.t1	AT3G29020	38.679	106	62	2	14	118	65	168	1.14e-20	90.1
MS.gene20960.t1	AT3G29020	38.679	106	62	2	14	118	67	170	1.17e-20	91.7
MS.gene20960.t1	AT2G02820	37.815	119	72	2	4	121	19	136	5.16e-19	88.6
MS.gene20960.t1	AT2G02820	37.815	119	72	2	4	121	19	136	5.35e-19	87.4
MS.gene20960.t1	AT4G00540	42.342	111	58	3	12	118	101	209	6.01e-19	87.8
MS.gene20960.t1	AT2G02820	37.815	119	72	2	4	121	19	136	9.03e-19	87.8
MS.gene20960.t1	AT4G00540	42.342	111	58	3	12	118	99	207	1.27e-18	87.4
MS.gene20960.t1	AT5G40430	38.053	113	66	3	9	120	49	158	3.32e-18	83.6
MS.gene20960.t1	AT1G14350	40.000	105	62	1	17	121	28	131	3.75e-18	85.9
MS.gene20960.t1	AT1G14350	40.000	105	62	1	17	121	28	131	3.75e-18	85.9
MS.gene20960.t1	AT5G61420	66.667	54	18	0	81	134	2	55	1.18e-16	79.7
MS.gene20960.t1	AT2G37630	35.246	122	77	1	17	136	7	128	1.21e-16	80.9
MS.gene20960.t1	AT5G39700	34.545	110	71	1	9	118	51	159	1.28e-14	72.0
MS.gene20960.t1	AT1G74430	70.732	41	12	0	88	128	19	59	1.77e-14	72.0
MS.gene20960.t1	AT4G28110	73.171	41	11	0	88	128	4	44	4.06e-14	70.9
MS.gene20960.t1	AT5G59780	60.870	46	18	0	73	118	4	49	1.75e-13	68.6
MS.gene20960.t1	AT3G46130	60.870	46	18	0	73	118	4	49	1.96e-13	68.9
MS.gene20960.t1	AT5G15310	53.731	67	25	1	88	154	9	69	2.33e-13	69.7
MS.gene20960.t1	AT1G14350	43.939	66	37	0	56	121	23	88	2.12e-12	68.2
MS.gene20960.t1	AT1G14350	43.939	66	37	0	56	121	23	88	2.12e-12	68.2
MS.gene20960.t1	AT1G22640	61.364	44	17	0	88	131	16	59	2.18e-12	65.5
MS.gene20960.t1	AT5G14340	55.556	45	20	0	88	132	10	54	2.57e-12	65.5
MS.gene20960.t1	AT4G25560	61.224	49	19	0	71	119	3	51	3.16e-12	65.9
MS.gene20960.t1	AT3G18100	35.417	96	61	1	13	108	545	639	6.27e-11	64.3
MS.gene20960.t1	AT3G18100	35.417	96	61	1	13	108	497	591	7.68e-11	64.3
MS.gene20960.t1	AT3G18100	35.417	96	61	1	13	108	384	478	8.31e-11	63.9
MS.gene20960.t1	AT3G28910	50.943	53	24	1	77	129	1	51	8.58e-11	62.0

Find 65 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTGTTATGAAACCTGTTTC+TGG	0.187715	1.3:-60461771	None:intergenic
TCTTTCCAGAACTTGAACTA+TGG	0.254408	1.3:+60461411	MS.gene20960:CDS
ATCTCATTGTCTGTTCTTCC+TGG	0.281887	1.3:-60461087	None:intergenic
CCTCGGACGGAGTTCATAAC+TGG	0.293507	1.3:+60461607	MS.gene20960:CDS
ATGTTTGTACCTGCTAGTTT+GGG	0.316790	1.3:-60460691	None:intergenic
TATGTTTGTACCTGCTAGTT+TGG	0.322284	1.3:-60460692	None:intergenic
TTGATCCATAGTTCAAGTTC+TGG	0.343300	1.3:-60461416	None:intergenic
AAAGGTGTGGGAAGAGTTGC+AGG	0.345434	1.3:+60460810	MS.gene20960:CDS
GAGAGTGGTTTGTGAGTGTT+TGG	0.356009	1.3:-60461165	None:intergenic
GCTACTATTGTTGATCTTTG+AGG	0.360896	1.3:-60461331	None:intergenic
CCAACATCCATGACCATGTT+TGG	0.389930	1.3:-60460659	None:intergenic
ACATGTTAAGCCAACTGTTT+CGG	0.398547	1.3:+60461581	MS.gene20960:CDS
TGCTACCAAACCTGGTATCT+AGG	0.408405	1.3:-60461374	None:intergenic
GTGAAACAAATAGATGCATT+TGG	0.408858	1.3:-60461459	None:intergenic
TTCATGCAGTACTTGGTAAC+AGG	0.409516	1.3:+60460912	MS.gene20960:CDS
AGAAGTTTCTCATCTTCCTC+TGG	0.426768	1.3:-60460625	None:intergenic
ATTGAACTTCATGCAGTACT+TGG	0.433082	1.3:+60460905	MS.gene20960:CDS
TTATTCCTAGATACCAGGTT+TGG	0.454673	1.3:+60461369	MS.gene20960:CDS
GCCAACTGTTTCGGTTTCCT+CGG	0.459910	1.3:+60461590	MS.gene20960:CDS
TTAGCCTCAGTGTACATTGA+TGG	0.461448	1.3:-60461747	None:intergenic
TGATACAGAATGGAGCATAT+TGG	0.462241	1.3:-60461535	None:intergenic
TTGAGGCCTGATTTGAAAAG+AGG	0.464473	1.3:+60460851	MS.gene20960:CDS
TAGCCTCAGTGTACATTGAT+GGG	0.467430	1.3:-60461746	None:intergenic
AGAAGTTAAGGAAAGGACTT+TGG	0.475806	1.3:+60460599	MS.gene20960:CDS
GGAAGAGTTGCAGGTTAAGA+TGG	0.476199	1.3:+60460819	MS.gene20960:CDS
CGTTACAAGAAGAAATGAAA+TGG	0.480075	1.3:+60461679	MS.gene20960:CDS
GGTTGATTCTGCATAAGAAA+TGG	0.480248	1.3:-60461720	None:intergenic
ACTTGAACTGCTACCAAACC+TGG	0.483346	1.3:-60461382	None:intergenic
ACTGAGGCTAAACCAGAAAC+AGG	0.484680	1.3:+60461759	MS.gene20960:CDS
TGGTATCTAGGAATAATTCA+TGG	0.486504	1.3:-60461362	None:intergenic
TTGAACTATGGATCAAACAT+AGG	0.491185	1.3:+60461423	MS.gene20960:CDS
GCTGCTACAAGCAGAAGTTA+AGG	0.502078	1.3:+60460587	MS.gene20960:CDS
CTGAATTACATTACCAAACA+TGG	0.502718	1.3:+60460646	MS.gene20960:CDS
CAGATGAATCATGTACTAGT+TGG	0.505678	1.3:+60461790	MS.gene20960:CDS
ATTTGTGAAGAAGTTGAAGT+TGG	0.511516	1.3:-60461483	None:intergenic
CCAAACATGGTCATGGATGT+TGG	0.521644	1.3:+60460659	MS.gene20960:CDS
CATTTCATTTCTTCTTGTAA+CGG	0.527153	1.3:-60461678	None:intergenic
TTTACAGGTTTGCAAAGGTG+TGG	0.532239	1.3:+60460797	MS.gene20960:intron
GTTGAAGTTGAGAAAATTGA+GGG	0.536490	1.3:-60461558	None:intergenic
ACTGTTTCGGTTTCCTCGGA+CGG	0.541892	1.3:+60461594	MS.gene20960:CDS
CAGATTGCAGCACAATTACC+AGG	0.546616	1.3:+60461069	MS.gene20960:CDS
ATGAATTATTCCTAGATACC+AGG	0.549894	1.3:+60461364	MS.gene20960:CDS
TACATTACCAAACATGGTCA+TGG	0.551080	1.3:+60460652	MS.gene20960:CDS
AAGAAAAGATTGAGACAAAG+TGG	0.551516	1.3:+60461135	MS.gene20960:CDS
AGTTCTGTCCCCAAACTAGC+AGG	0.555346	1.3:+60460682	MS.gene20960:CDS
AAATTGAGGGTGATACAGAA+TGG	0.566456	1.3:-60461545	None:intergenic
TGTTGAAGTTGAGAAAATTG+AGG	0.567398	1.3:-60461559	None:intergenic
TTACAGGTTTGCAAAGGTGT+GGG	0.568173	1.3:+60460798	MS.gene20960:intron
AACATTAACAACACAAACAA+CGG	0.580018	1.3:+60461648	MS.gene20960:CDS
TGAACTATGGATCAAACATA+GGG	0.580769	1.3:+60461424	MS.gene20960:CDS
ACTTTCTGATATATATAGCA+AGG	0.584658	1.3:+60461842	MS.gene20960:CDS
TGTTTGTGTTGTTAATGTTG+TGG	0.590374	1.3:-60461644	None:intergenic
TCCGAGGAAACCGAAACAGT+TGG	0.603461	1.3:-60461591	None:intergenic
CTCGGACGGAGTTCATAACT+GGG	0.605268	1.3:+60461608	MS.gene20960:CDS
TAAGATGGATAAATTACTTG+AGG	0.605702	1.3:+60460834	MS.gene20960:CDS
AGCCTCAGTGTACATTGATG+GGG	0.607267	1.3:-60461745	None:intergenic
GAGGTAGTAGAAACTTCTAG+AGG	0.610829	1.3:-60461312	None:intergenic
CACTCACAAACCACTCTCTG+AGG	0.631167	1.3:+60461170	MS.gene20960:CDS
AGGTAGTAGAAACTTCTAGA+GGG	0.636573	1.3:-60461311	None:intergenic
TACAAGCAGAAGTTAAGGAA+AGG	0.639660	1.3:+60460592	MS.gene20960:CDS
CCAGTTATGAACTCCGTCCG+AGG	0.643154	1.3:-60461607	None:intergenic
TGTTTGTACCTGCTAGTTTG+GGG	0.646582	1.3:-60460690	None:intergenic
GAAAGGACTTTGGTCTCCAG+AGG	0.652425	1.3:+60460609	MS.gene20960:CDS
TCAGTGTACATTGATGGGGA+AGG	0.652779	1.3:-60461741	None:intergenic
TTCCCCATCAATGTACACTG+AGG	0.775584	1.3:+60461743	MS.gene20960:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATAAATTTAATCTTTTAC+AGG	+	chr1.3:60460782-60460801	MS.gene20960:intron	10.0%
!!!	ATTTTTTTATACTATAGTTT+TGG	+	chr1.3:60460997-60461016	MS.gene20960:intron	10.0%
!!	ACAATGAGATTAAAAATCTA+TGG	+	chr1.3:60461100-60461119	MS.gene20960:CDS	20.0%
!	AACATTAACAACACAAACAA+CGG	+	chr1.3:60461648-60461667	MS.gene20960:CDS	25.0%
!	ACTTTCTGATATATATAGCA+AGG	+	chr1.3:60461842-60461861	MS.gene20960:CDS	25.0%
!	CATTTCATTTCTTCTTGTAA+CGG	-	chr1.3:60461681-60461700	None:intergenic	25.0%
!	TAAGATGGATAAATTACTTG+AGG	+	chr1.3:60460834-60460853	MS.gene20960:CDS	25.0%
!!!	GTTTTGGTTTAATTATGTGA+TGG	+	chr1.3:60461013-60461032	MS.gene20960:intron	25.0%
	AAGAAAAGATTGAGACAAAG+TGG	+	chr1.3:60461135-60461154	MS.gene20960:CDS	30.0%
	ATGAATTATTCCTAGATACC+AGG	+	chr1.3:60461364-60461383	MS.gene20960:CDS	30.0%
	ATTTGTGAAGAAGTTGAAGT+TGG	-	chr1.3:60461486-60461505	None:intergenic	30.0%
	CCTACAAAAACTTCTATAGA+AGG	+	chr1.3:60461285-60461304	MS.gene20960:CDS	30.0%
	CGTTACAAGAAGAAATGAAA+TGG	+	chr1.3:60461679-60461698	MS.gene20960:CDS	30.0%
	CTGAATTACATTACCAAACA+TGG	+	chr1.3:60460646-60460665	MS.gene20960:CDS	30.0%
	GTGAAACAAATAGATGCATT+TGG	-	chr1.3:60461462-60461481	None:intergenic	30.0%
	GTTGAAGTTGAGAAAATTGA+GGG	-	chr1.3:60461561-60461580	None:intergenic	30.0%
	TGAACTATGGATCAAACATA+GGG	+	chr1.3:60461424-60461443	MS.gene20960:CDS	30.0%
	TGGTATCTAGGAATAATTCA+TGG	-	chr1.3:60461365-60461384	None:intergenic	30.0%
	TGTTGAAGTTGAGAAAATTG+AGG	-	chr1.3:60461562-60461581	None:intergenic	30.0%
	TTGAACTATGGATCAAACAT+AGG	+	chr1.3:60461423-60461442	MS.gene20960:CDS	30.0%
!	AATCTTTTACAGGTTTGCAA+AGG	+	chr1.3:60460792-60460811	MS.gene20960:intron	30.0%
!	CCTTCTATAGAAGTTTTTGT+AGG	-	chr1.3:60461288-60461307	None:intergenic	30.0%
!	TGAAACTGAAGCTTTTTGAT+TGG	-	chr1.3:60461235-60461254	None:intergenic	30.0%
!	TGTTTGTGTTGTTAATGTTG+TGG	-	chr1.3:60461647-60461666	None:intergenic	30.0%
!!	TGTTGTTGCTTTATATCAGA+TGG	+	chr1.3:60461043-60461062	MS.gene20960:intron	30.0%
!!!	AGCTTTTTGATTGGTTTTGT+TGG	-	chr1.3:60461226-60461245	None:intergenic	30.0%
	AAATTGAGGGTGATACAGAA+TGG	-	chr1.3:60461548-60461567	None:intergenic	35.0%
	ACATGTTAAGCCAACTGTTT+CGG	+	chr1.3:60461581-60461600	MS.gene20960:CDS	35.0%
	AGAAGTTAAGGAAAGGACTT+TGG	+	chr1.3:60460599-60460618	MS.gene20960:CDS	35.0%
	AGGTAGTAGAAACTTCTAGA+GGG	-	chr1.3:60461314-60461333	None:intergenic	35.0%
	ATTGAACTTCATGCAGTACT+TGG	+	chr1.3:60460905-60460924	MS.gene20960:CDS	35.0%
	CAGATGAATCATGTACTAGT+TGG	+	chr1.3:60461790-60461809	MS.gene20960:CDS	35.0%
	GCTACTATTGTTGATCTTTG+AGG	-	chr1.3:60461334-60461353	None:intergenic	35.0%
	TACAAGCAGAAGTTAAGGAA+AGG	+	chr1.3:60460592-60460611	MS.gene20960:CDS	35.0%
	TACATTACCAAACATGGTCA+TGG	+	chr1.3:60460652-60460671	MS.gene20960:CDS	35.0%
	TATGTTTGTACCTGCTAGTT+TGG	-	chr1.3:60460695-60460714	None:intergenic	35.0%
	TCTGTTATGAAACCTGTTTC+TGG	-	chr1.3:60461774-60461793	None:intergenic	35.0%
	TCTTTCCAGAACTTGAACTA+TGG	+	chr1.3:60461411-60461430	MS.gene20960:CDS	35.0%
	TGATACAGAATGGAGCATAT+TGG	-	chr1.3:60461538-60461557	None:intergenic	35.0%
	TTATTCCTAGATACCAGGTT+TGG	+	chr1.3:60461369-60461388	MS.gene20960:CDS	35.0%
!	AATGCTCCTCTTTTCAAATC+AGG	-	chr1.3:60460860-60460879	None:intergenic	35.0%
!	ATGTTTGTACCTGCTAGTTT+GGG	-	chr1.3:60460694-60460713	None:intergenic	35.0%
!	GGTTGATTCTGCATAAGAAA+TGG	-	chr1.3:60461723-60461742	None:intergenic	35.0%
!	TTGATCCATAGTTCAAGTTC+TGG	-	chr1.3:60461419-60461438	None:intergenic	35.0%
	AGAAGTTTCTCATCTTCCTC+TGG	-	chr1.3:60460628-60460647	None:intergenic	40.0%
	ATCTCATTGTCTGTTCTTCC+TGG	-	chr1.3:60461090-60461109	None:intergenic	40.0%
	GAGGTAGTAGAAACTTCTAG+AGG	-	chr1.3:60461315-60461334	None:intergenic	40.0%
	TAGCCTCAGTGTACATTGAT+GGG	-	chr1.3:60461749-60461768	None:intergenic	40.0%
	TTAGCCTCAGTGTACATTGA+TGG	-	chr1.3:60461750-60461769	None:intergenic	40.0%
	TTTACAGGTTTGCAAAGGTG+TGG	+	chr1.3:60460797-60460816	MS.gene20960:intron	40.0%
!	CAGAGATTTTCAGTGGCTTT+TGG	+	chr1.3:60461870-60461889	MS.gene20960:CDS	40.0%
!	TCATTTTCAACCTCAGAGAG+TGG	-	chr1.3:60461183-60461202	None:intergenic	40.0%
!	TGTTTGTACCTGCTAGTTTG+GGG	-	chr1.3:60460693-60460712	None:intergenic	40.0%
!	TTACAGGTTTGCAAAGGTGT+GGG	+	chr1.3:60460798-60460817	MS.gene20960:intron	40.0%
!	TTCATGCAGTACTTGGTAAC+AGG	+	chr1.3:60460912-60460931	MS.gene20960:CDS	40.0%
!	TTGAGGCCTGATTTGAAAAG+AGG	+	chr1.3:60460851-60460870	MS.gene20960:CDS	40.0%
	ACTGAGGCTAAACCAGAAAC+AGG	+	chr1.3:60461759-60461778	MS.gene20960:CDS	45.0%
	ACTTGAACTGCTACCAAACC+TGG	-	chr1.3:60461385-60461404	None:intergenic	45.0%
	AGCCTCAGTGTACATTGATG+GGG	-	chr1.3:60461748-60461767	None:intergenic	45.0%
	CAGATTGCAGCACAATTACC+AGG	+	chr1.3:60461069-60461088	MS.gene20960:CDS	45.0%
	CCAAACATGGTCATGGATGT+TGG	+	chr1.3:60460659-60460678	MS.gene20960:CDS	45.0%
	CCAACATCCATGACCATGTT+TGG	-	chr1.3:60460662-60460681	None:intergenic	45.0%
	GCTGCTACAAGCAGAAGTTA+AGG	+	chr1.3:60460587-60460606	MS.gene20960:CDS	45.0%
	GGAAGAGTTGCAGGTTAAGA+TGG	+	chr1.3:60460819-60460838	MS.gene20960:CDS	45.0%
	TCAGTGTACATTGATGGGGA+AGG	-	chr1.3:60461744-60461763	None:intergenic	45.0%
	TGCTACCAAACCTGGTATCT+AGG	-	chr1.3:60461377-60461396	None:intergenic	45.0%
	TTCCCCATCAATGTACACTG+AGG	+	chr1.3:60461743-60461762	MS.gene20960:CDS	45.0%
!	GAGAGTGGTTTGTGAGTGTT+TGG	-	chr1.3:60461168-60461187	None:intergenic	45.0%
!	GGATCTGCAGAGATTTTCAG+TGG	+	chr1.3:60461863-60461882	MS.gene20960:CDS	45.0%
	ACTGTTTCGGTTTCCTCGGA+CGG	+	chr1.3:60461594-60461613	MS.gene20960:CDS	50.0%
	AGTTCTGTCCCCAAACTAGC+AGG	+	chr1.3:60460682-60460701	MS.gene20960:CDS	50.0%
	CACTCACAAACCACTCTCTG+AGG	+	chr1.3:60461170-60461189	MS.gene20960:CDS	50.0%
	CTCGGACGGAGTTCATAACT+GGG	+	chr1.3:60461608-60461627	MS.gene20960:CDS	50.0%
	GAAAGGACTTTGGTCTCCAG+AGG	+	chr1.3:60460609-60460628	MS.gene20960:CDS	50.0%
	GCCAACTGTTTCGGTTTCCT+CGG	+	chr1.3:60461590-60461609	MS.gene20960:CDS	50.0%
	TCCGAGGAAACCGAAACAGT+TGG	-	chr1.3:60461594-60461613	None:intergenic	50.0%
!	AAAGGTGTGGGAAGAGTTGC+AGG	+	chr1.3:60460810-60460829	MS.gene20960:CDS	50.0%
	CCAGTTATGAACTCCGTCCG+AGG	-	chr1.3:60461610-60461629	None:intergenic	55.0%
	CCTCGGACGGAGTTCATAAC+TGG	+	chr1.3:60461607-60461626	MS.gene20960:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	60460571	60461905	60460571	ID=MS.gene20960
chr1.3	mRNA	60460571	60461905	60460571	ID=MS.gene20960.t1;Parent=MS.gene20960
chr1.3	exon	60460571	60460703	60460571	ID=MS.gene20960.t1.exon1;Parent=MS.gene20960.t1
chr1.3	CDS	60460571	60460703	60460571	ID=cds.MS.gene20960.t1;Parent=MS.gene20960.t1
chr1.3	exon	60460804	60460933	60460804	ID=MS.gene20960.t1.exon2;Parent=MS.gene20960.t1
chr1.3	CDS	60460804	60460933	60460804	ID=cds.MS.gene20960.t1;Parent=MS.gene20960.t1
chr1.3	exon	60461062	60461905	60461062	ID=MS.gene20960.t1.exon3;Parent=MS.gene20960.t1
chr1.3	CDS	60461062	60461905	60461062	ID=cds.MS.gene20960.t1;Parent=MS.gene20960.t1

Gene Sequence

>MS.gene20960

ATGGGAAGACATTCTTGCTGCTACAAGCAGAAGTTAAGGAAAGGACTTTGGTCTCCAGAGGAAGATGAGAAACTTCTGAATTACATTACCAAACATGGTCATGGATGTTGGAGTTCTGTCCCCAAACTAGCAGGTACAAACATACATATATTATATATTAATATTGTATATATTGTTCTTTCAATGCTTCATTCATACATTTTCATCTGATATATAAATTTAATCTTTTACAGGTTTGCAAAGGTGTGGGAAGAGTTGCAGGTTAAGATGGATAAATTACTTGAGGCCTGATTTGAAAAGAGGAGCATTCTCACAACAAGAAGAGAATTTGATCATTGAACTTCATGCAGTACTTGGTAACAGGTAATTGTAATTCATTTGAGAAACTATAATAACTATTTTTCATAAGTTCTTTTTTTTTTATTTATTTTTTTATACTATAGTTTTGGTTTAATTATGTGATGGAATTAATTGTTGTTGCTTTATATCAGATGGTCTCAGATTGCAGCACAATTACCAGGAAGAACAGACAATGAGATTAAAAATCTATGGAATTCATGTCTCAAGAAAAGATTGAGACAAAGTGGCATTGATCCAAACACTCACAAACCACTCTCTGAGGTTGAAAATGACAATGAAAAATCACTCACATCCAACAAAACCAATCAAAAAGCTTCAGTTTCATCTAATGAAGTCATGAGTTTGATGATTGAACCTACAAAAACTTCTATAGAAGGATACCCTCTAGAAGTTTCTACTACCTCAAAGATCAACAATAGTAGCAGCAGCAGCCATGAATTATTCCTAGATACCAGGTTTGGTAGCAGTTCAAGTTATTTTTCTTTCCAGAACTTGAACTATGGATCAAACATAGGGATTTCTGAAAATCCAAATGCATCTATTTGTTTCACACCAACTTCAACTTCTTCACAAATTATGTCAGATACAAATTCTGTTATAACTTCCAATATGCTCCATTCTGTATCACCCTCAATTTTCTCAACTTCAACACATGTTAAGCCAACTGTTTCGGTTTCCTCGGACGGAGTTCATAACTGGGAAGCAAGTAACTACCACAACATTAACAACACAAACAACGGCGCTTTACCGTTACAAGAAGAAATGAAATGGTCTGAGTATCTTAACACACCATTTCTTATGCAGAATCAACCTTCCCCATCAATGTACACTGAGGCTAAACCAGAAACAGGTTTCATAACAGATGAATCATGTACTAGTTGGCAGCAGCAGCAGCAACAACAAAATTTTCAACTTTCTGATATATATAGCAAGGATCTGCAGAGATTTTCAGTGGCTTTTGGACAAACTATGTAG

Protein sequence

>MS.gene20960.t1

MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQSGIDPNTHKPLSEVENDNEKSLTSNKTNQKASVSSNEVMSLMIEPTKTSIEGYPLEVSTTSKINNSSSSSHELFLDTRFGSSSSYFSFQNLNYGSNIGISENPNASICFTPTSTSSQIMSDTNSVITSNMLHSVSPSIFSTSTHVKPTVSVSSDGVHNWEASNYHNINNTNNGALPLQEEMKWSEYLNTPFLMQNQPSPSMYTEAKPETGFITDESCTSWQQQQQQQNFQLSDIYSKDLQRFSVAFGQTM