AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058334


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058334.t1 MTR_2g032030 97.046 474 4 4 1 465 11 483 0.0 929
MS.gene058334.t1 MTR_2g032030 96.535 404 4 4 1 395 11 413 0.0 784
MS.gene058334.t1 MTR_7g079040 49.223 193 69 5 220 411 135 299 6.77e-48 167
MS.gene058334.t1 MTR_8g028565 41.441 222 99 4 220 441 136 326 1.49e-43 156
MS.gene058334.t1 MTR_7g109600 42.857 245 102 11 198 411 4 241 2.42e-39 143
MS.gene058334.t1 MTR_8g087000 65.625 96 31 1 220 313 45 140 1.43e-37 137
MS.gene058334.t1 MTR_1g099600 61.165 103 31 1 220 322 165 258 2.11e-37 139
MS.gene058334.t1 MTR_8g087000 65.957 94 30 1 222 313 48 141 9.18e-37 135
MS.gene058334.t1 MTR_2g083870 55.556 117 46 2 203 313 28 144 3.39e-35 132
MS.gene058334.t1 MTR_8g098945 68.235 85 23 1 249 333 129 209 5.82e-35 131
MS.gene058334.t1 MTR_2g016770 52.344 128 51 2 221 348 11 128 2.94e-32 122
MS.gene058334.t1 MTR_2g016770 52.756 127 50 2 222 348 4 120 5.33e-32 121
MS.gene058334.t1 MTR_4g127040 59.770 87 30 1 220 306 221 302 2.86e-29 117
MS.gene058334.t1 MTR_1g009613 57.955 88 32 2 219 306 237 319 4.47e-29 117
MS.gene058334.t1 MTR_5g016610 56.842 95 36 2 212 306 167 256 1.25e-27 111
MS.gene058334.t1 MTR_4g094908 57.471 87 32 2 220 306 242 323 6.31e-26 108
MS.gene058334.t1 MTR_1g070455 53.846 91 36 3 222 311 271 356 9.30e-25 105
MS.gene058334.t1 MTR_3g108960 48.454 97 45 2 210 306 280 371 2.49e-24 104
MS.gene058334.t1 MTR_2g024350 51.948 77 36 1 247 322 6 82 2.25e-23 98.6
MS.gene058334.t1 MTR_0117s0040 46.392 97 44 1 210 306 43 131 3.73e-23 98.6
MS.gene058334.t1 MTR_2g024380 37.143 140 74 3 187 325 202 328 6.46e-23 101
MS.gene058334.t1 MTR_7g109600 42.529 174 64 9 269 411 7 175 6.14e-21 90.9
MS.gene058334.t1 MTR_1g086790 52.632 76 34 2 250 324 159 233 3.31e-20 91.7
MS.gene058334.t1 MTR_8g069935 50.549 91 34 2 220 309 311 391 1.09e-19 91.7
MS.gene058334.t1 MTR_7g110720 52.113 71 34 0 249 319 216 286 7.49e-19 89.0
MS.gene058334.t1 MTR_7g110720 52.113 71 34 0 249 319 189 259 8.51e-19 88.6
MS.gene058334.t1 MTR_3g053330 41.584 101 58 1 224 324 227 326 9.13e-19 89.0
MS.gene058334.t1 MTR_4g094588 57.377 61 25 1 250 310 179 238 1.18e-18 87.4
MS.gene058334.t1 MTR_7g011820 51.316 76 36 1 250 325 411 485 1.33e-18 88.6
MS.gene058334.t1 MTR_4g007060 49.367 79 39 1 243 321 123 200 6.73e-18 84.3
MS.gene058334.t1 MTR_4g082580 41.584 101 52 2 218 312 241 340 6.89e-18 85.5
MS.gene058334.t1 MTR_4g007060 49.367 79 39 1 243 321 157 234 7.53e-18 84.7
MS.gene058334.t1 MTR_8g067635 50.000 74 36 1 247 319 347 420 7.73e-18 86.3
MS.gene058334.t1 MTR_2g023930 57.377 61 26 0 249 309 305 365 1.09e-17 85.9
MS.gene058334.t1 MTR_8g087000 71.111 45 13 0 269 313 35 79 1.10e-17 81.3
MS.gene058334.t1 MTR_5g042920 47.561 82 39 2 250 328 321 401 5.38e-17 83.2
MS.gene058334.t1 MTR_5g091390 55.738 61 26 1 250 310 158 217 5.54e-17 82.0
MS.gene058334.t1 MTR_6g053200 52.381 63 30 0 250 312 331 393 8.60e-17 83.2
MS.gene058334.t1 MTR_8g067650 48.649 74 37 1 247 319 337 410 9.04e-17 83.2
MS.gene058334.t1 MTR_2g105060 43.038 79 45 0 246 324 91 169 1.07e-16 79.7
MS.gene058334.t1 MTR_4g049790 40.860 93 48 1 227 319 297 382 1.11e-16 82.8
MS.gene058334.t1 MTR_4g094412 54.098 61 28 0 250 310 244 304 1.29e-16 82.4
MS.gene058334.t1 MTR_4g094412 54.098 61 28 0 250 310 235 295 1.32e-16 82.4
MS.gene058334.t1 MTR_7g109800 39.200 125 67 4 210 330 109 228 1.39e-16 80.5
MS.gene058334.t1 MTR_4g132430 53.333 60 28 0 250 309 128 187 1.54e-16 81.3
MS.gene058334.t1 MTR_2g105060 43.038 79 45 0 246 324 166 244 1.63e-16 80.5
MS.gene058334.t1 MTR_7g009730 48.571 70 36 0 250 319 220 289 1.65e-16 82.4
MS.gene058334.t1 MTR_4g049760 45.333 75 41 0 245 319 286 360 1.67e-16 82.4
MS.gene058334.t1 MTR_5g067680 40.404 99 53 2 208 304 165 259 2.20e-16 80.9
MS.gene058334.t1 MTR_4g132430 53.333 60 28 0 250 309 262 321 2.23e-16 81.6
MS.gene058334.t1 MTR_7g062220 43.299 97 48 2 210 306 91 180 2.38e-16 80.1
MS.gene058334.t1 MTR_7g100510 55.385 65 28 1 247 311 359 422 5.96e-16 80.1
MS.gene058334.t1 MTR_7g100510 47.143 70 35 2 250 319 190 257 3.97e-12 68.2
MS.gene058334.t1 MTR_7g080020 40.000 100 53 2 220 313 458 556 6.47e-16 80.9
MS.gene058334.t1 MTR_7g080020 47.143 70 35 2 240 309 271 338 2.08e-11 66.6
MS.gene058334.t1 MTR_2g045360 39.394 99 59 1 223 321 186 283 1.26e-15 79.0
MS.gene058334.t1 MTR_5g094430 39.583 96 46 3 250 342 253 339 1.69e-15 79.0
MS.gene058334.t1 MTR_5g043880 54.386 57 25 1 250 306 125 180 1.85e-15 77.0
MS.gene058334.t1 MTR_5g094430 39.583 96 46 3 250 342 231 317 2.06e-15 78.2
MS.gene058334.t1 MTR_3g056100 42.045 88 41 2 250 328 272 358 2.08e-15 78.6
MS.gene058334.t1 MTR_3g056100 42.045 88 41 2 250 328 259 345 2.12e-15 78.6
MS.gene058334.t1 MTR_2g088000 45.833 72 39 0 250 321 350 421 2.36e-15 79.0
MS.gene058334.t1 MTR_3g104750 38.614 101 57 3 207 307 66 161 2.43e-15 73.9
MS.gene058334.t1 MTR_3g056100 50.794 63 30 1 250 312 416 477 2.97e-15 78.6
MS.gene058334.t1 MTR_3g056100 50.794 63 30 1 250 312 403 464 3.24e-15 78.6
MS.gene058334.t1 MTR_2g033820 51.667 60 28 1 250 309 204 262 3.26e-15 77.4
MS.gene058334.t1 MTR_5g094430 39.583 96 46 3 250 342 365 451 3.46e-15 78.2
MS.gene058334.t1 MTR_8g027860 31.250 224 111 10 161 374 54 244 3.66e-15 77.0
MS.gene058334.t1 MTR_3g095040 35.537 121 74 3 192 310 60 178 4.78e-15 74.3
MS.gene058334.t1 MTR_8g092010 40.217 92 47 3 218 309 84 167 4.79e-15 73.6
MS.gene058334.t1 MTR_3g106060 52.632 57 27 0 250 306 139 195 7.43e-15 75.5
MS.gene058334.t1 MTR_4g107970 51.667 60 29 0 250 309 256 315 1.40e-14 76.6
MS.gene058334.t1 MTR_7g117200 40.816 98 44 3 250 341 119 208 1.41e-14 75.1
MS.gene058334.t1 MTR_4g107970 51.667 60 29 0 250 309 179 238 1.54e-14 76.3
MS.gene058334.t1 MTR_1g013760 42.857 77 39 1 230 306 126 197 2.46e-14 73.6
MS.gene058334.t1 MTR_3g090860 42.342 111 56 4 250 357 134 239 2.60e-14 74.3
MS.gene058334.t1 MTR_7g080000 39.394 99 53 2 220 312 397 494 2.75e-14 75.9
MS.gene058334.t1 MTR_7g080000 50.000 70 33 2 240 309 225 292 2.42e-12 69.7
MS.gene058334.t1 MTR_4g122530 42.667 75 42 1 250 324 209 282 3.55e-14 74.7
MS.gene058334.t1 MTR_7g079010 42.697 89 47 4 220 307 113 198 3.96e-14 72.0
MS.gene058334.t1 MTR_3g009470 46.575 73 37 2 243 314 488 559 4.79e-14 75.1
MS.gene058334.t1 MTR_3g009470 42.857 91 46 4 250 339 281 366 2.30e-12 69.7
MS.gene058334.t1 MTR_4g013260 46.479 71 36 2 243 312 329 398 9.51e-14 73.6
MS.gene058334.t1 MTR_4g013260 49.254 67 31 2 250 314 185 250 2.42e-12 69.3
MS.gene058334.t1 MTR_8g007270 33.065 124 73 3 183 306 97 210 1.03e-13 70.9
MS.gene058334.t1 MTR_7g028415 45.902 61 32 1 247 307 91 150 1.04e-13 69.3
MS.gene058334.t1 MTR_7g028710 45.902 61 32 1 247 307 91 150 1.04e-13 69.3
MS.gene058334.t1 MTR_6g086555 44.156 77 41 2 234 309 191 266 1.36e-13 72.8
MS.gene058334.t1 MTR_1g077780 49.180 61 30 1 250 310 63 122 2.17e-13 67.8
MS.gene058334.t1 MTR_1g015140 34.862 109 66 3 199 307 56 159 3.65e-13 67.8
MS.gene058334.t1 MTR_5g074400 38.614 101 53 2 220 312 383 482 3.71e-13 72.0
MS.gene058334.t1 MTR_4g130900 47.761 67 32 2 250 314 360 425 4.42e-13 71.6
MS.gene058334.t1 MTR_5g097490 48.485 66 33 1 250 315 253 317 5.47e-13 70.9
MS.gene058334.t1 MTR_7g071120 41.573 89 49 3 243 330 317 403 7.49e-13 70.9
MS.gene058334.t1 MTR_3g031220 46.154 65 34 1 250 314 366 429 1.13e-12 70.5
MS.gene058334.t1 MTR_1g013790 42.424 66 38 0 246 311 98 163 1.21e-12 68.2
MS.gene058334.t1 MTR_8g092140 46.667 60 31 1 247 306 158 216 1.27e-12 67.8
MS.gene058334.t1 MTR_3g095080 46.667 60 31 1 247 306 142 200 2.44e-12 66.6
MS.gene058334.t1 MTR_3g095080 46.667 60 31 1 247 306 166 224 2.67e-12 67.0
MS.gene058334.t1 MTR_3g009470 42.857 91 46 4 250 339 281 366 3.39e-12 68.9
MS.gene058334.t1 MTR_1g078260 46.970 66 33 2 242 306 240 304 7.77e-12 67.8
MS.gene058334.t1 MTR_8g099350 50.877 57 26 1 250 304 133 189 3.40e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058334.t1 AT1G30650 40.862 487 200 15 1 465 10 430 9.95e-85 267
MS.gene058334.t1 AT2G34830 41.850 454 183 15 1 426 1 401 1.51e-80 256
MS.gene058334.t1 AT2G34830 41.850 454 183 15 1 426 10 410 2.10e-80 256
MS.gene058334.t1 AT4G01250 66.364 110 27 1 220 329 109 208 1.92e-44 157
MS.gene058334.t1 AT5G52830 52.667 150 37 3 220 369 145 260 1.61e-40 149
MS.gene058334.t1 AT1G29280 60.526 114 39 2 208 320 32 140 8.62e-40 144
MS.gene058334.t1 AT5G45050 40.467 257 112 9 198 439 1113 1343 9.82e-40 153
MS.gene058334.t1 AT5G45050 40.467 257 112 9 198 439 1141 1371 1.05e-39 153
MS.gene058334.t1 AT5G45050 40.467 257 112 9 198 439 1002 1232 1.15e-39 153
MS.gene058334.t1 AT3G58710 68.478 92 28 1 220 310 40 131 4.18e-38 140
MS.gene058334.t1 AT3G58710 66.327 98 32 1 214 310 35 132 5.44e-38 140
MS.gene058334.t1 AT4G23550 54.762 126 36 2 224 349 124 228 1.61e-34 131
MS.gene058334.t1 AT2G30590 54.455 101 40 3 212 311 281 376 7.90e-29 117
MS.gene058334.t1 AT5G45260 57.009 107 33 2 220 324 1190 1285 1.81e-28 119
MS.gene058334.t1 AT2G23320 46.957 115 56 1 192 306 188 297 2.03e-27 112
MS.gene058334.t1 AT4G31550 54.545 88 35 1 219 306 220 302 4.45e-27 111
MS.gene058334.t1 AT4G24240 53.191 94 39 1 213 306 250 338 1.12e-26 110
MS.gene058334.t1 AT4G31550 55.172 87 34 1 220 306 222 303 1.64e-26 109
MS.gene058334.t1 AT2G24570 54.023 87 35 1 220 306 219 300 2.86e-25 106
MS.gene058334.t1 AT5G28650 52.874 87 36 2 220 306 238 319 1.07e-23 102
MS.gene058334.t1 AT3G04670 52.874 87 36 2 220 306 238 319 1.39e-23 101
MS.gene058334.t1 AT5G46350 54.054 74 31 2 250 321 184 256 4.01e-20 91.7
MS.gene058334.t1 AT1G29860 53.623 69 30 2 250 317 137 204 1.13e-18 86.7
MS.gene058334.t1 AT4G18170 57.377 61 25 1 250 310 173 232 2.06e-18 86.3
MS.gene058334.t1 AT1G68150 48.649 74 38 0 250 323 236 309 2.69e-18 86.7
MS.gene058334.t1 AT1G13960 45.000 100 42 4 220 309 219 315 4.97e-18 85.9
MS.gene058334.t1 AT1G13960 50.000 60 28 2 250 309 77 134 2.70e-11 65.5
MS.gene058334.t1 AT1G13960 45.000 100 42 4 220 309 372 468 6.19e-18 86.7
MS.gene058334.t1 AT1G13960 50.000 60 28 2 250 309 230 287 3.48e-11 65.9
MS.gene058334.t1 AT4G04450 48.684 76 39 0 249 324 198 273 1.15e-17 85.5
MS.gene058334.t1 AT4G04450 48.684 76 39 0 249 324 292 367 1.29e-17 85.9
MS.gene058334.t1 AT5G49520 55.000 60 26 1 250 309 222 280 1.58e-17 84.7
MS.gene058334.t1 AT1G62300 55.738 61 27 0 249 309 312 372 1.59e-17 85.5
MS.gene058334.t1 AT4G22070 55.738 61 27 0 249 309 297 357 2.59e-17 84.7
MS.gene058334.t1 AT4G22070 55.738 61 27 0 249 309 297 357 2.59e-17 84.7
MS.gene058334.t1 AT4G22070 55.738 61 27 0 249 309 297 357 2.59e-17 84.7
MS.gene058334.t1 AT4G22070 55.738 61 27 0 249 309 297 357 2.59e-17 84.7
MS.gene058334.t1 AT2G04880 54.545 66 29 1 247 312 281 345 3.42e-17 84.3
MS.gene058334.t1 AT2G04880 54.545 66 29 1 247 312 305 369 3.75e-17 84.3
MS.gene058334.t1 AT1G80840 48.485 66 34 0 246 311 143 208 7.50e-17 81.6
MS.gene058334.t1 AT3G62340 45.679 81 43 1 250 330 119 198 1.64e-16 80.1
MS.gene058334.t1 AT2G03340 52.308 65 30 1 250 314 416 479 2.17e-16 82.0
MS.gene058334.t1 AT2G03340 40.217 92 53 2 250 341 251 340 2.79e-12 69.3
MS.gene058334.t1 AT4G01720 39.000 100 60 1 210 309 201 299 3.06e-16 81.3
MS.gene058334.t1 AT5G15130 47.143 70 37 0 250 319 228 297 9.25e-16 80.1
MS.gene058334.t1 AT5G26170 47.887 71 35 2 236 306 101 169 1.12e-15 75.1
MS.gene058334.t1 AT5G15130 47.143 70 37 0 250 319 186 255 1.17e-15 79.7
MS.gene058334.t1 AT1G18860 53.333 60 28 0 250 309 240 299 1.47e-15 79.3
MS.gene058334.t1 AT2G21900 37.363 91 53 2 220 310 83 169 2.26e-15 75.1
MS.gene058334.t1 AT1G69310 52.632 57 26 1 250 306 148 203 3.08e-15 76.6
MS.gene058334.t1 AT1G69310 52.632 57 26 1 250 306 148 203 3.08e-15 76.6
MS.gene058334.t1 AT1G69310 52.632 57 26 1 250 306 148 203 3.08e-15 76.6
MS.gene058334.t1 AT4G31800 47.945 73 35 1 250 322 112 181 3.53e-15 75.5
MS.gene058334.t1 AT2G25000 51.667 60 29 0 250 309 104 163 5.39e-15 74.7
MS.gene058334.t1 AT2G25000 51.667 60 29 0 250 309 104 163 5.39e-15 74.7
MS.gene058334.t1 AT4G31800 47.945 73 35 1 250 322 177 246 6.07e-15 75.9
MS.gene058334.t1 AT2G25000 51.667 60 29 0 250 309 126 185 8.06e-15 74.7
MS.gene058334.t1 AT5G07100 46.053 76 36 2 250 321 142 216 9.99e-15 73.6
MS.gene058334.t1 AT5G07100 46.053 76 36 2 250 321 142 216 9.99e-15 73.6
MS.gene058334.t1 AT5G07100 46.053 76 36 2 250 321 142 216 9.99e-15 73.6
MS.gene058334.t1 AT5G07100 46.053 76 36 2 250 321 142 216 9.99e-15 73.6
MS.gene058334.t1 AT2G47260 51.667 60 28 1 250 309 175 233 1.23e-14 75.5
MS.gene058334.t1 AT2G25000 51.667 60 29 0 250 309 147 206 1.47e-14 74.3
MS.gene058334.t1 AT5G07100 46.053 76 36 2 250 321 235 309 2.00e-14 74.3
MS.gene058334.t1 AT5G41570 40.000 90 48 2 218 307 72 155 2.19e-14 71.6
MS.gene058334.t1 AT1G69810 38.462 104 50 3 217 319 184 274 2.42e-14 75.1
MS.gene058334.t1 AT1G64000 50.820 61 29 1 247 307 112 171 2.49e-14 72.0
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 206 269 3.61e-14 74.3
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 206 269 3.61e-14 74.3
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 206 269 3.61e-14 74.3
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 206 269 3.61e-14 74.3
MS.gene058334.t1 AT1G69810 38.462 104 50 3 217 319 126 216 4.55e-14 73.6
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 310 373 5.42e-14 74.3
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 382 445 5.54e-14 74.7
MS.gene058334.t1 AT4G26640 46.154 65 34 1 250 314 342 405 5.61e-14 74.3
MS.gene058334.t1 AT4G30935 45.714 70 35 2 247 314 329 397 7.21e-14 73.9
MS.gene058334.t1 AT3G01080 50.000 60 29 1 250 309 345 403 8.04e-14 73.9
MS.gene058334.t1 AT3G01080 47.059 68 34 2 250 317 206 271 3.23e-12 68.9
MS.gene058334.t1 AT3G01080 50.000 60 29 1 250 309 307 365 9.01e-14 73.6
MS.gene058334.t1 AT3G01080 47.059 68 34 2 250 317 168 233 3.56e-12 68.6
MS.gene058334.t1 AT2G37260 54.386 57 25 1 250 306 270 325 9.78e-14 72.8
MS.gene058334.t1 AT2G37260 28.934 197 118 5 243 420 79 272 7.12e-11 63.9
MS.gene058334.t1 AT2G37260 54.386 57 25 1 250 306 268 323 9.90e-14 72.8
MS.gene058334.t1 AT2G37260 28.934 197 118 5 243 420 77 270 7.24e-11 63.9
MS.gene058334.t1 AT5G56270 49.206 63 31 1 250 312 488 549 1.00e-13 73.9
MS.gene058334.t1 AT5G56270 47.059 68 32 3 250 315 274 339 1.60e-11 67.0
MS.gene058334.t1 AT2G37260 54.386 57 25 1 250 306 350 405 1.09e-13 73.2
MS.gene058334.t1 AT2G37260 28.934 197 118 5 243 420 159 352 7.15e-11 64.3
MS.gene058334.t1 AT5G13080 45.902 61 32 1 247 307 65 124 1.12e-13 68.9
MS.gene058334.t1 AT2G38470 44.444 72 39 1 250 321 363 433 1.32e-13 73.2
MS.gene058334.t1 AT4G39410 36.458 96 53 2 211 306 192 279 1.40e-13 71.6
MS.gene058334.t1 AT2G40750 32.394 142 85 4 220 355 122 258 3.24e-13 71.2
MS.gene058334.t1 AT2G44745 38.462 91 55 1 216 306 112 201 5.24e-13 68.6
MS.gene058334.t1 AT2G30250 50.820 61 29 1 250 310 329 388 6.05e-13 70.9
MS.gene058334.t1 AT4G26440 44.118 68 37 1 247 314 370 436 7.33e-13 71.2
MS.gene058334.t1 AT4G26440 46.667 75 36 3 250 322 179 251 1.36e-12 70.1
MS.gene058334.t1 AT2G40740 40.449 89 46 3 220 305 147 231 1.29e-12 68.9
MS.gene058334.t1 AT2G46130 45.902 61 32 1 247 307 28 87 1.29e-12 64.7
MS.gene058334.t1 AT1G55600 46.774 62 32 1 248 309 306 366 1.32e-12 70.1
MS.gene058334.t1 AT5G43290 35.811 148 88 5 250 395 115 257 1.73e-12 68.2
MS.gene058334.t1 AT2G40740 40.909 88 45 3 220 304 156 239 1.82e-12 68.6
MS.gene058334.t1 AT5G24110 46.575 73 32 2 234 304 103 170 2.07e-12 68.2
MS.gene058334.t1 AT3G01080 47.059 68 34 2 250 317 206 271 2.38e-12 68.2
MS.gene058334.t1 AT3G01970 47.368 57 29 1 250 306 66 121 4.91e-12 63.9
MS.gene058334.t1 AT4G11070 44.928 69 32 2 250 312 110 178 5.03e-12 67.0
MS.gene058334.t1 AT3G56400 30.159 126 78 2 189 304 52 177 5.08e-12 67.0
MS.gene058334.t1 AT4G11070 44.928 69 32 2 250 312 142 210 5.16e-12 67.0
MS.gene058334.t1 AT1G66550 33.684 95 61 1 212 304 66 160 6.81e-12 65.9
MS.gene058334.t1 AT2G46400 39.583 96 46 4 214 304 73 161 1.28e-11 65.9
MS.gene058334.t1 AT5G64810 46.667 60 31 1 247 306 108 166 1.33e-11 63.9
MS.gene058334.t1 AT4G23810 36.559 93 54 2 250 340 159 248 1.36e-11 65.9
MS.gene058334.t1 AT1G66560 49.153 59 28 1 248 304 102 160 1.85e-11 64.7
MS.gene058334.t1 AT1G80590 33.333 126 77 2 250 373 86 206 2.28e-11 64.3
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 3.45e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 3.45e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 3.87e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 3.97e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 4.12e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 4.12e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 4.19e-11 66.2
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 402 526 4.20e-11 66.2
MS.gene058334.t1 AT4G12020 30.769 169 96 5 250 402 469 632 4.37e-11 66.2
MS.gene058334.t1 AT4G12020 30.769 169 96 5 250 402 469 632 4.60e-11 65.9
MS.gene058334.t1 AT4G12020 34.646 127 65 4 250 360 469 593 4.61e-11 65.9
MS.gene058334.t1 AT1G66550 34.000 100 59 3 212 304 66 165 6.07e-11 63.2

Find 77 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAAGAAGATTCATAATT+AGG 0.177473 2.2:+56478723 None:intergenic
TGATTAAACAATAGGTTTAA+TGG 0.202593 2.2:+56476570 None:intergenic
ATAATTGATGTTGCTTCTTC+TGG 0.224592 2.2:-56478876 MS.gene058334:CDS
ATAACAGCAGAAGGTTTAAT+TGG 0.226101 2.2:+56478678 None:intergenic
TTGTTCTCTTGTTCTTCTTT+TGG 0.236616 2.2:+56476780 None:intergenic
CATCATAGCCTTCTCTTGTT+TGG 0.267430 2.2:+56476435 None:intergenic
GGATAAGGTGAACCTTTAAT+AGG 0.279412 2.2:+56477699 None:intergenic
TAATTAGGTAACTTTGGATT+TGG 0.279457 2.2:+56478738 None:intergenic
CAAAACCTTGATTAAACAAT+AGG 0.283013 2.2:+56476562 None:intergenic
CAGTGATGGACTTTCTTATA+AGG 0.284819 2.2:-56476655 MS.gene058334:CDS
CTATTGTTTAATCAAGGTTT+TGG 0.313071 2.2:-56476561 MS.gene058334:CDS
TAATGTGAAGGAAGAGAATA+TGG 0.318581 2.2:-56476721 MS.gene058334:CDS
TTGTGGGCTTGGAGAAAATA+TGG 0.327482 2.2:-56477729 MS.gene058334:CDS
TATGGTCAGAAGCCTATTAA+AGG 0.340677 2.2:-56477711 MS.gene058334:CDS
TCTCTTAAAGTTGAGAATAA+TGG 0.344831 2.2:+56478981 None:intergenic
TTCCTTCAGATTTGTGGGCT+TGG 0.351444 2.2:-56477740 MS.gene058334:CDS
ATCCATTTCATCTCTTTGAT+TGG 0.356655 2.2:-56476497 MS.gene058334:CDS
TCCTTCACATTATTAACAAC+TGG 0.362057 2.2:+56476732 None:intergenic
GCAGAAGGTTTAATTGGTCT+TGG 0.364059 2.2:+56478684 None:intergenic
TTTCATCTCTTTGATTGGTC+AGG 0.365054 2.2:-56476492 MS.gene058334:CDS
GACCAATCAAAGAGATGAAA+TGG 0.366081 2.2:+56476495 None:intergenic
GATTCATAATTAGGTAACTT+TGG 0.391610 2.2:+56478732 None:intergenic
TAGGTTATAACCAACATGTT+TGG 0.405752 2.2:+56476936 None:intergenic
GTGGTAATTCAAGTAATGAT+AGG 0.407677 2.2:-56476539 MS.gene058334:CDS
AAGTAGTTCCTTCAGATTTG+TGG 0.419426 2.2:-56477746 MS.gene058334:CDS
AGTAGTTCCTTCAGATTTGT+GGG 0.437348 2.2:-56477745 MS.gene058334:CDS
TTAAACCTATTGTTTAATCA+AGG 0.440685 2.2:-56476567 MS.gene058334:CDS
ATCTCATCTTCAAGGAATAC+AGG 0.440973 2.2:-56478597 MS.gene058334:CDS
TGTCTACTATTTGCAGCTGC+TGG 0.441459 2.2:+56477777 None:intergenic
CTATTTGCAGCTGCTGGTGC+AGG 0.451080 2.2:+56477783 None:intergenic
GGAACAAACATGAACATGTT+TGG 0.451519 2.2:-56479008 MS.gene058334:CDS
GCTAAAGCATTTCTTTGTGT+TGG 0.460805 2.2:+56476888 None:intergenic
ATAATCAGAGGTGGTACTGC+TGG 0.461238 2.2:-56479197 MS.gene058334:CDS
CTTAGCATTAATATTGATGT+TGG 0.461905 2.2:+56478650 None:intergenic
AAAGTAACTTACCTTGGATA+AGG 0.462105 2.2:+56477684 None:intergenic
GAGTTCAGATCTCATCTTCA+AGG 0.463546 2.2:-56478605 MS.gene058334:CDS
GCTGCAAATAGTAGACAAAC+TGG 0.465679 2.2:-56477771 MS.gene058334:CDS
TGGTTCTTCAAATGAGTTGT+TGG 0.473949 2.2:+56476455 None:intergenic
ATGAAATGGATCTAAAACCT+TGG 0.480200 2.2:+56476509 None:intergenic
GGTTTAATTGGTCTTGGAGA+AGG 0.498591 2.2:+56478690 None:intergenic
TATAGATGCAGCAGTTCAAA+GGG 0.512628 2.2:-56476999 MS.gene058334:CDS
ACACAAAGAAATGCTTTAGC+AGG 0.513036 2.2:-56476885 MS.gene058334:CDS
CTACAAATTGAGATGGATGA+AGG 0.513528 2.2:-56476684 MS.gene058334:CDS
TTATAGATGCAGCAGTTCAA+AGG 0.515496 2.2:-56477000 MS.gene058334:CDS
TTGGTTGAAATAACAGCAGA+AGG 0.519861 2.2:+56478669 None:intergenic
TCTGTTCTTGAAGACAATAG+AGG 0.525437 2.2:-56479032 MS.gene058334:CDS
GCTGGAGCATATAGTAGTAC+AGG 0.528666 2.2:-56479179 MS.gene058334:CDS
CAACATCAATATTAATGCTA+AGG 0.530488 2.2:-56478649 MS.gene058334:CDS
GAACAGAAGAGAAACTCAAA+GGG 0.532880 2.2:+56479048 None:intergenic
TGGACTTTCTTATAAGGTGA+TGG 0.535954 2.2:-56476649 MS.gene058334:CDS
GAAGCAACATCAATTATAGC+AGG 0.537336 2.2:+56478882 None:intergenic
ACCAGTTGTTAATAATGTGA+AGG 0.542330 2.2:-56476733 MS.gene058334:CDS
CTCCAAGCCCACAAATCTGA+AGG 0.549243 2.2:+56477738 None:intergenic
GAGAACAATAATAACAGTGA+TGG 0.557395 2.2:-56476765 MS.gene058334:CDS
TTAAAGGTTCACCTTATCCA+AGG 0.571044 2.2:-56477695 MS.gene058334:intron
TTGAAGAACCAAACAAGAGA+AGG 0.573435 2.2:-56476443 MS.gene058334:CDS
TGGTAATTCAAGTAATGATA+GGG 0.573489 2.2:-56476538 MS.gene058334:CDS
AGAACAGAAGAGAAACTCAA+AGG 0.577454 2.2:+56479047 None:intergenic
AGAGAAGCTACAAATTGAGA+TGG 0.578599 2.2:-56476691 MS.gene058334:CDS
GCATTTCTTTGTGTTGGCCA+TGG 0.583655 2.2:+56476894 None:intergenic
CAGAACTGATCCAAACATGT+TGG 0.596203 2.2:-56476946 MS.gene058334:CDS
ATGATTGTGTTCTGAAGTGT+AGG 0.601847 2.2:+56476917 None:intergenic
GGAATACAGGTCTTAAACGA+AGG 0.603168 2.2:-56478584 MS.gene058334:intron
ATCATGATCATGATAATCAG+TGG 0.603815 2.2:-56479118 MS.gene058334:CDS
GGAAAATAGCAAAATTCATG+AGG 0.604467 2.2:-56476628 MS.gene058334:CDS
GTTCAAAGGGATGTTCAGCT+AGG 0.605745 2.2:-56476986 MS.gene058334:CDS
GATGAAGGAGAATTCAGTGA+TGG 0.613782 2.2:-56476669 MS.gene058334:CDS
TAATGATAGGGATCAATCCA+AGG 0.614402 2.2:-56476526 MS.gene058334:CDS
ATGTTGAAGTAAGAAGAAGA+AGG 0.625967 2.2:+56478930 None:intergenic
CTTCAGAACACAATCATCCA+TGG 0.626675 2.2:-56476911 MS.gene058334:CDS
TCATGATGATGTGAAACTGC+AGG 0.629252 2.2:+56479134 None:intergenic
TCAAGTATGGACAATTACCT+AGG 0.636819 2.2:-56479233 None:intergenic
GTTCTTGAAGACAATAGAGG+AGG 0.649107 2.2:-56479029 MS.gene058334:CDS
GATTTAACTGACATAATCAG+AGG 0.660960 2.2:-56479209 MS.gene058334:CDS
GATTCTCTTCTAGACAACAC+AGG 0.690701 2.2:-56478627 MS.gene058334:CDS
TTAACTGACATAATCAGAGG+TGG 0.698541 2.2:-56479206 MS.gene058334:CDS
TTATGTCAGTTAAATCACCT+AGG 0.732430 2.2:+56479216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAACTATTAGATT+AGG + chr2.2:56477689-56477708 None:intergenic 10.0%
!!! TTCTTCTTATTATTATTTTT+TGG - chr2.2:56478625-56478644 MS.gene058334:CDS 10.0%
!! TGAAATTAATTATAGTAACA+TGG + chr2.2:56477200-56477219 None:intergenic 15.0%
!! TGTTACTATAATTAATTTCA+TGG - chr2.2:56477200-56477219 MS.gene058334:intron 15.0%
!!! ATTTTGAAGTAGAAATTTTA+TGG - chr2.2:56477269-56477288 MS.gene058334:intron 15.0%
!!! GTTTTTTTTATTTCCTTTTT+TGG - chr2.2:56477698-56477717 MS.gene058334:CDS 15.0%
!!! TTGGTAATCTAAAAATTAAA+AGG + chr2.2:56477619-56477638 None:intergenic 15.0%
!! AAAAAAACATGTACCAAAAA+AGG + chr2.2:56477714-56477733 None:intergenic 20.0%
!! AAGGAAATGATTATAGTTAT+AGG + chr2.2:56478091-56478110 None:intergenic 20.0%
!! AATATTGTTACGAAACTTAA+AGG + chr2.2:56478510-56478529 None:intergenic 20.0%
!! TAGCAATTAAAAATACATTG+AGG - chr2.2:56478020-56478039 MS.gene058334:intron 20.0%
!! TCATTAATTGAAAACCTAAT+AGG + chr2.2:56478276-56478295 None:intergenic 20.0%
!! TCTAAAAATTAAAAGGACTA+TGG + chr2.2:56477612-56477631 None:intergenic 20.0%
!! TGATTAAACAATAGGTTTAA+TGG + chr2.2:56479097-56479116 None:intergenic 20.0%
!! TTAAACCTATTGTTTAATCA+AGG - chr2.2:56479097-56479116 MS.gene058334:CDS 20.0%
!! TTACAAGTAACAATATACAA+TGG + chr2.2:56478153-56478172 None:intergenic 20.0%
!! TTATTCCAATTAAAATAGCT+AGG + chr2.2:56477648-56477667 None:intergenic 20.0%
!!! ATTATTTTTTGGTTGCTATT+AGG - chr2.2:56478636-56478655 MS.gene058334:CDS 20.0%
!!! CTTTATAGAAGTATTGTTTT+TGG + chr2.2:56478825-56478844 None:intergenic 20.0%
!!! TGTATTAAGCAATTTTGATT+TGG - chr2.2:56478421-56478440 MS.gene058334:intron 20.0%
!!! TTATTTTTTGGTTGCTATTA+GGG - chr2.2:56478637-56478656 MS.gene058334:CDS 20.0%
!!! TTGATTTGGTATATAATGTT+AGG - chr2.2:56478435-56478454 MS.gene058334:intron 20.0%
!!! TTTAAGATAAGTTTCTTGAA+AGG + chr2.2:56477528-56477547 None:intergenic 20.0%
!!! TTTGAGAATATGTTTTTACA+TGG + chr2.2:56476890-56476909 None:intergenic 20.0%
! AGATAACAAAAACAACAACA+AGG - chr2.2:56478180-56478199 MS.gene058334:intron 25.0%
! CAAAACCTTGATTAAACAAT+AGG + chr2.2:56479105-56479124 None:intergenic 25.0%
! CAACATCAATATTAATGCTA+AGG - chr2.2:56477015-56477034 MS.gene058334:intron 25.0%
! CTTAGCATTAATATTGATGT+TGG + chr2.2:56477017-56477036 None:intergenic 25.0%
! GATTCATAATTAGGTAACTT+TGG + chr2.2:56476935-56476954 None:intergenic 25.0%
! GTTGAAGAAGATTCATAATT+AGG + chr2.2:56476944-56476963 None:intergenic 25.0%
! GTTTAATTAAGAAGCCTATT+AGG - chr2.2:56478259-56478278 MS.gene058334:intron 25.0%
! TAATTAGGTAACTTTGGATT+TGG + chr2.2:56476929-56476948 None:intergenic 25.0%
! TCTCTTAAAGTTGAGAATAA+TGG + chr2.2:56476686-56476705 None:intergenic 25.0%
! TGATCAAGTTCTTGTAAAAA+TGG + chr2.2:56476710-56476729 None:intergenic 25.0%
! TGGTAATTCAAGTAATGATA+GGG - chr2.2:56479126-56479145 MS.gene058334:CDS 25.0%
! TTAGAGAGAGATTTCTTAAT+TGG + chr2.2:56478216-56478235 None:intergenic 25.0%
! TTGTGTAATGAATTAATTGC+AGG - chr2.2:56477828-56477847 MS.gene058334:intron 25.0%
!! CTATTGTTTAATCAAGGTTT+TGG - chr2.2:56479103-56479122 MS.gene058334:CDS 25.0%
!! TAAAATAGCTAGGTATGTTT+TGG + chr2.2:56477638-56477657 None:intergenic 25.0%
!!! ACATACCTAGCTATTTTAAT+TGG - chr2.2:56477640-56477659 MS.gene058334:intron 25.0%
!!! ATAGAAGTATTGTTTTTGGA+TGG + chr2.2:56478821-56478840 None:intergenic 25.0%
!!! CTTTTCATATTCATTGATTG+AGG - chr2.2:56478312-56478331 MS.gene058334:intron 25.0%
!!! TATTTTTTGGTTGCTATTAG+GGG - chr2.2:56478638-56478657 MS.gene058334:CDS 25.0%
AAACACAGTAGTACATTACA+AGG + chr2.2:56478110-56478129 None:intergenic 30.0%
AAAGTAACTTACCTTGGATA+AGG + chr2.2:56477983-56478002 None:intergenic 30.0%
AAGTACTATTGAGAGAAAGT+AGG - chr2.2:56477303-56477322 MS.gene058334:intron 30.0%
AAGTATTTGATTGGTGGAAA+TGG - chr2.2:56477785-56477804 MS.gene058334:CDS 30.0%
AATACCTAAACGAGACTTAA+AGG + chr2.2:56478562-56478581 None:intergenic 30.0%
ACCAGTTGTTAATAATGTGA+AGG - chr2.2:56478931-56478950 MS.gene058334:CDS 30.0%
AGTACTATTGAGAGAAAGTA+GGG - chr2.2:56477304-56477323 MS.gene058334:intron 30.0%
ATAACAGCAGAAGGTTTAAT+TGG + chr2.2:56476989-56477008 None:intergenic 30.0%
ATCATGATCATGATAATCAG+TGG - chr2.2:56476546-56476565 MS.gene058334:CDS 30.0%
ATCCATTTCATCTCTTTGAT+TGG - chr2.2:56479167-56479186 MS.gene058334:CDS 30.0%
ATGTTGAAGTAAGAAGAAGA+AGG + chr2.2:56476737-56476756 None:intergenic 30.0%
GAAACAATGTCAAAACCTAA+CGG + chr2.2:56478534-56478553 None:intergenic 30.0%
GAGAACAATAATAACAGTGA+TGG - chr2.2:56478899-56478918 MS.gene058334:CDS 30.0%
GATTTAACTGACATAATCAG+AGG - chr2.2:56476455-56476474 MS.gene058334:CDS 30.0%
GGAAAATAGCAAAATTCATG+AGG - chr2.2:56479036-56479055 MS.gene058334:CDS 30.0%
GTGGTAATTCAAGTAATGAT+AGG - chr2.2:56479125-56479144 MS.gene058334:CDS 30.0%
GTTATCAAGACTATAACATG+TGG - chr2.2:56477405-56477424 MS.gene058334:intron 30.0%
TAAAGGACTAATCTGATACA+GGG + chr2.2:56478493-56478512 None:intergenic 30.0%
TAATGTGAAGGAAGAGAATA+TGG - chr2.2:56478943-56478962 MS.gene058334:CDS 30.0%
TAGGTTATAACCAACATGTT+TGG + chr2.2:56478731-56478750 None:intergenic 30.0%
TCCTTCACATTATTAACAAC+TGG + chr2.2:56478935-56478954 None:intergenic 30.0%
TCTAAGAAAGTAACTTACCT+TGG + chr2.2:56477989-56478008 None:intergenic 30.0%
TTAAAGGACTAATCTGATAC+AGG + chr2.2:56478494-56478513 None:intergenic 30.0%
TTATGTCAGTTAAATCACCT+AGG + chr2.2:56476451-56476470 None:intergenic 30.0%
TTCGTAACAATATTTCCGTT+AGG - chr2.2:56478516-56478535 MS.gene058334:intron 30.0%
! ATAATTGATGTTGCTTCTTC+TGG - chr2.2:56476788-56476807 MS.gene058334:CDS 30.0%
! ATGAAATGGATCTAAAACCT+TGG + chr2.2:56479158-56479177 None:intergenic 30.0%
! CATGTGGTTTAATTTCTTTG+AGG - chr2.2:56477421-56477440 MS.gene058334:intron 30.0%
! TCAAAGGAATAGGAATTTTC+AGG + chr2.2:56477572-56477591 None:intergenic 30.0%
! TGAAGAGTGAAGTATTTGAT+TGG - chr2.2:56477776-56477795 MS.gene058334:CDS 30.0%
! TTGTTCTCTTGTTCTTCTTT+TGG + chr2.2:56478887-56478906 None:intergenic 30.0%
! TTTTTGTGCATGATGATCAA+AGG + chr2.2:56477588-56477607 None:intergenic 30.0%
!! TTGTTTAATCAAGGTTTTGG+TGG - chr2.2:56479106-56479125 MS.gene058334:CDS 30.0%
!!! TAGGAATTTTCAGGTAGTTA+TGG + chr2.2:56477563-56477582 None:intergenic 30.0%
AAGTAGTTCCTTCAGATTTG+TGG - chr2.2:56477918-56477937 MS.gene058334:intron 35.0%
ACACAAAGAAATGCTTTAGC+AGG - chr2.2:56478779-56478798 MS.gene058334:CDS 35.0%
AGAACAGAAGAGAAACTCAA+AGG + chr2.2:56476620-56476639 None:intergenic 35.0%
AGAGAAGCTACAAATTGAGA+TGG - chr2.2:56478973-56478992 MS.gene058334:CDS 35.0%
AGTAGTTCCTTCAGATTTGT+GGG - chr2.2:56477919-56477938 MS.gene058334:intron 35.0%
ATCTCATCTTCAAGGAATAC+AGG - chr2.2:56477067-56477086 MS.gene058334:intron 35.0%
CAAAAACAACAACAAGGCTT+AGG - chr2.2:56478186-56478205 MS.gene058334:intron 35.0%
CAATGGTCAAGCTAAAAATG+TGG + chr2.2:56478136-56478155 None:intergenic 35.0%
CAGGAAGAATCAAGCAAAAA+AGG - chr2.2:56477847-56477866 MS.gene058334:intron 35.0%
CTACAAATTGAGATGGATGA+AGG - chr2.2:56478980-56478999 MS.gene058334:CDS 35.0%
GAACAGAAGAGAAACTCAAA+GGG + chr2.2:56476619-56476638 None:intergenic 35.0%
GAAGAATCAAGCAAAAAAGG+TGG - chr2.2:56477850-56477869 MS.gene058334:intron 35.0%
GAAGCAACATCAATTATAGC+AGG + chr2.2:56476785-56476804 None:intergenic 35.0%
GACCAATCAAAGAGATGAAA+TGG + chr2.2:56479172-56479191 None:intergenic 35.0%
GGAACAAACATGAACATGTT+TGG - chr2.2:56476656-56476675 MS.gene058334:CDS 35.0%
GGATAAGGTGAACCTTTAAT+AGG + chr2.2:56477968-56477987 None:intergenic 35.0%
TAATGATAGGGATCAATCCA+AGG - chr2.2:56479138-56479157 MS.gene058334:CDS 35.0%
TATAGATGCAGCAGTTCAAA+GGG - chr2.2:56478665-56478684 MS.gene058334:CDS 35.0%
TATGGTCAGAAGCCTATTAA+AGG - chr2.2:56477953-56477972 MS.gene058334:intron 35.0%
TATTGAGAGAAAGTAGGGTT+TGG - chr2.2:56477309-56477328 MS.gene058334:intron 35.0%
TCTGTTCTTGAAGACAATAG+AGG - chr2.2:56476632-56476651 MS.gene058334:CDS 35.0%
TGCATGATGATCAAAGGAAT+AGG + chr2.2:56477582-56477601 None:intergenic 35.0%
TGGACTTTCTTATAAGGTGA+TGG - chr2.2:56479015-56479034 MS.gene058334:CDS 35.0%
TGGTTCTTCAAATGAGTTGT+TGG + chr2.2:56479212-56479231 None:intergenic 35.0%
TTAAAGGTTCACCTTATCCA+AGG - chr2.2:56477969-56477988 MS.gene058334:intron 35.0%
TTAACTGACATAATCAGAGG+TGG - chr2.2:56476458-56476477 MS.gene058334:CDS 35.0%
TTATAGATGCAGCAGTTCAA+AGG - chr2.2:56478664-56478683 MS.gene058334:CDS 35.0%
TTGAAGAACCAAACAAGAGA+AGG - chr2.2:56479221-56479240 MS.gene058334:CDS 35.0%
TTGGTTGAAATAACAGCAGA+AGG + chr2.2:56476998-56477017 None:intergenic 35.0%
! AGAGTGAAGTATTTGATTGG+TGG - chr2.2:56477779-56477798 MS.gene058334:CDS 35.0%
! GCTAAAGCATTTCTTTGTGT+TGG + chr2.2:56478779-56478798 None:intergenic 35.0%
! TTTCATCTCTTTGATTGGTC+AGG - chr2.2:56479172-56479191 MS.gene058334:CDS 35.0%
!! AGAAGCTAACTCTACTTTTC+AGG + chr2.2:56477468-56477487 None:intergenic 35.0%
!! ATGATTGTGTTCTGAAGTGT+AGG + chr2.2:56478750-56478769 None:intergenic 35.0%
!! CAGTGATGGACTTTCTTATA+AGG - chr2.2:56479009-56479028 MS.gene058334:CDS 35.0%
!!! GAGGACTTTTTTGCTGAATT+GGG - chr2.2:56479055-56479074 MS.gene058334:CDS 35.0%
!!! TGAGGACTTTTTTGCTGAAT+TGG - chr2.2:56479054-56479073 MS.gene058334:CDS 35.0%
ACTACACGTGGCACTATTAA+TGG - chr2.2:56477365-56477384 MS.gene058334:intron 40.0%
AGTAGGGTTTGGCATAAGTT+AGG - chr2.2:56477320-56477339 MS.gene058334:intron 40.0%
CAGAACTGATCCAAACATGT+TGG - chr2.2:56478718-56478737 MS.gene058334:CDS 40.0%
CTTCAGAACACAATCATCCA+TGG - chr2.2:56478753-56478772 MS.gene058334:CDS 40.0%
GACTCCTTTAAGTCTCGTTT+AGG - chr2.2:56478555-56478574 MS.gene058334:intron 40.0%
GAGTTCAGATCTCATCTTCA+AGG - chr2.2:56477059-56477078 MS.gene058334:intron 40.0%
GATACAGGGTCGAAACTTAA+AGG + chr2.2:56478479-56478498 None:intergenic 40.0%
GATGAAGGAGAATTCAGTGA+TGG - chr2.2:56478995-56479014 MS.gene058334:CDS 40.0%
GATTCTCTTCTAGACAACAC+AGG - chr2.2:56477037-56477056 MS.gene058334:intron 40.0%
GCTGCAAATAGTAGACAAAC+TGG - chr2.2:56477893-56477912 MS.gene058334:intron 40.0%
GGAATACAGGTCTTAAACGA+AGG - chr2.2:56477080-56477099 MS.gene058334:intron 40.0%
GTTCTTGAAGACAATAGAGG+AGG - chr2.2:56476635-56476654 MS.gene058334:CDS 40.0%
TTGTGGGCTTGGAGAAAATA+TGG - chr2.2:56477935-56477954 MS.gene058334:intron 40.0%
! CTTTTTCTTGTGACTACACG+TGG - chr2.2:56477353-56477372 MS.gene058334:intron 40.0%
! GCAGAAGGTTTAATTGGTCT+TGG + chr2.2:56476983-56477002 None:intergenic 40.0%
! TCATGATGATGTGAAACTGC+AGG + chr2.2:56476533-56476552 None:intergenic 40.0%
!! GGTTTAATTGGTCTTGGAGA+AGG + chr2.2:56476977-56476996 None:intergenic 40.0%
!!! GGCTTTGTTGTGTCATTTTG+TGG + chr2.2:56478866-56478885 None:intergenic 40.0%
ATAATCAGAGGTGGTACTGC+TGG - chr2.2:56476467-56476486 MS.gene058334:CDS 45.0%
GCTGGAGCATATAGTAGTAC+AGG - chr2.2:56476485-56476504 MS.gene058334:CDS 45.0%
GTTCAAAGGGATGTTCAGCT+AGG - chr2.2:56478678-56478697 MS.gene058334:CDS 45.0%
TGTCTACTATTTGCAGCTGC+TGG + chr2.2:56477890-56477909 None:intergenic 45.0%
TTCCTTCAGATTTGTGGGCT+TGG - chr2.2:56477924-56477943 MS.gene058334:intron 45.0%
! GCATTTCTTTGTGTTGGCCA+TGG + chr2.2:56478773-56478792 None:intergenic 45.0%
CTCCAAGCCCACAAATCTGA+AGG + chr2.2:56477929-56477948 None:intergenic 50.0%
CTATTTGCAGCTGCTGGTGC+AGG + chr2.2:56477884-56477903 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 56476437 56479249 56476437 ID=MS.gene058334
chr2.2 mRNA 56476437 56479249 56476437 ID=MS.gene058334.t1;Parent=MS.gene058334
chr2.2 exon 56478585 56479249 56478585 ID=MS.gene058334.t1.exon1;Parent=MS.gene058334.t1
chr2.2 CDS 56478585 56479249 56478585 ID=cds.MS.gene058334.t1;Parent=MS.gene058334.t1
chr2.2 exon 56477696 56477836 56477696 ID=MS.gene058334.t1.exon2;Parent=MS.gene058334.t1
chr2.2 CDS 56477696 56477836 56477696 ID=cds.MS.gene058334.t1;Parent=MS.gene058334.t1
chr2.2 exon 56476437 56477028 56476437 ID=MS.gene058334.t1.exon3;Parent=MS.gene058334.t1
chr2.2 CDS 56476437 56477028 56476437 ID=cds.MS.gene058334.t1;Parent=MS.gene058334.t1
Gene Sequence

>MS.gene058334

ATGGACAATTACCTAGGTGATTTAACTGACATAATCAGAGGTGGTACTGCTGGAGCATATAGTAGTACAGGAGCTTCATCATCATCTGCTGAACCTGCAGTTTCACATCATCATGATCATGATAATCAGTGGAATCATCATCATCATAATCATCAATTCTCTTCTGATCATCATCATCACCCTTTGAGTTTCTCTTCTGTTCTTGAAGACAATAGAGGAGGAACAAACATGAACATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCTTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATCATGAGATGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCAAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCAAGGAATACAGGTCTTAAACGAAGGTAAGATCAGACATTATATTATATTATCTGCTTAATTAATTAATATTAATAATTAATGTCATTGAATATAAGAGAATCAAATTAATTTATGCTGTCCATGTTACTATAATTAATTTCATGGTGATGAATTAATCACATACTAGTACTTTTTTTTTTTTATTTTTTTTATTTTGAAGTAGAAATTTTATGGTGATTTTTTTGAAGTACTATTGAGAGAAAGTAGGGTTTGGCATAAGTTAGGCACTTTGTTTCTTTTTCTTGTGACTACACGTGGCACTATTAATGGTTTATATTGAGAAGAAAGTTATCAAGACTATAACATGTGGTTTAATTTCTTTGAGGCTTTTCATAAATTAAAATTCACCTGAAAAGTAGAGTTAGCTTCTTGTCACACATAATTAAAATGACAGTCACAGAGACTGACCTTTCAAGAAACTTATCTTAAACTTACTTTTCTTCCATAACTACCTGAAAATTCCTATTCCTTTGATCATCATGCACAAAAAACCATAGTCCTTTTAATTTTTAGATTACCAAAACATACCTAGCTATTTTAATTGGAATAAATCAAATTAAATAGATAGCCTAATCTAATAGTTTTTTTTATTTCCTTTTTTGGTACATGTTTTTTTTTAATGTCTATATGATAGTATTCTTATTATTTCTTGCATATGTGAAGAGTGAAGTATTTGATTGGTGGAAATGGTAAATAACTATTTATTATTTTTGTGTAATGAATTAATTGCAGGAAGAATCAAGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGTAAGTTACTTTCTTAGAAGTACATAATTTAGCAATTAAAAATACATTGAGGCAAAGCTTCTTGATATTATTAATTCATCATGTTTGACTTGACTTACCTATAACTATAATCATTTCCTTGTAATGTACTACTGTGTTTCTTCCACATTTTTAGCTTGACCATTGTATATTGTTACTTGTAACACATTGAGATAACAAAAACAACAACAAGGCTTAGGTCTTCCAATTAAGAAATCTCTCTCTAATTGCTACTAGTATTTTATTAAGAGTTTAATTAAGAAGCCTATTAGGTTTTCAATTAATGAATACGACAATTCATCTCTTTTCATATTCATTGATTGAGGTGACAATACATGATTGTATGTATGCGTAAAATAATTGTATAATGAGAGAATATGCTAATTAAATTCTTTTATTAAAATAAATTTATTGTATTAAGCAATTTTGATTTGGTATATAATGTTAGGAAAAACTGCACATGTCATCCTTTAAGTTTCGACCCTGTATCAGATTAGTCCTTTAAGTTTCGTAACAATATTTCCGTTAGGTTTTGACATTGTTTCTGACTCCTTTAAGTCTCGTTTAGGTATTATGTTACAATGTTTCTTCTTGTTCAAAAAAAATGTTACAATGTTTCTTCTTATTATTATTTTTTGGTTGCTATTAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACTGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCTTTAGCAGGTTCAACAAGATCTCAACCATCCAAAAACAATACTTCTATAAAGAATTCAGAAACATCACAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCACCAGTTGTTAATAATGTGAAGGAAGAGAATATGGAAGATATAGAGAAGCTACAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAGGACTTTTTTGCTGAATTGGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCCAAGGTTTTAGATCCATTTCATCTCTTTGATTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAACAAGAGAAGGCTATGA

Protein sequence

>MS.gene058334.t1

MDNYLGDLTDIIRGGTAGAYSSTGASSSSAEPAVSHHHDHDNQWNHHHHNHQFSSDHHHHPLSFSSVLEDNRGGTNMNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPAIIDVASSGVSVTTSSSSSASVFALDHEMRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSIKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSKVLDPFHLFDWSGDNNNTNNSFEEPNKRRL