Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21028.t1 | XP_013469069.1 | 97.6 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 2.70E-221 | 777.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21028.t1 | Q80ZX8 | 38.8 | 139 | 83 | 2 | 48 | 184 | 213 | 351 | 4.5e-15 | 84.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21028.t1 | A0A072VMN4 | 97.6 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 2.0e-221 | 777.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21028 | MS.gene49154 | PPI |
| MS.gene21028 | MS.gene30654 | PPI |
| MS.gene21028 | MS.gene040499 | PPI |
| MS.gene21028 | MS.gene60613 | PPI |
| MS.gene21028 | MS.gene62607 | PPI |
| MS.gene21028 | MS.gene061126 | PPI |
| MS.gene21028 | MS.gene006231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21028.t1 | MTR_1g084100 | 97.613 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 0.0 | 845 |
| MS.gene21028.t1 | MTR_8g107280 | 41.414 | 99 | 57 | 1 | 52 | 149 | 483 | 581 | 1.55e-17 | 85.1 |
| MS.gene21028.t1 | MTR_4g094205 | 43.434 | 99 | 55 | 1 | 52 | 149 | 492 | 590 | 3.48e-16 | 80.9 |
| MS.gene21028.t1 | MTR_3g452710 | 38.393 | 112 | 68 | 1 | 44 | 154 | 7 | 118 | 1.88e-14 | 75.5 |
| MS.gene21028.t1 | MTR_3g452710 | 38.393 | 112 | 68 | 1 | 44 | 154 | 7 | 118 | 2.54e-14 | 75.1 |
| MS.gene21028.t1 | MTR_2g078020 | 30.657 | 137 | 88 | 2 | 55 | 190 | 469 | 599 | 6.45e-12 | 67.8 |
| MS.gene21028.t1 | MTR_2g078020 | 30.657 | 137 | 88 | 2 | 55 | 190 | 469 | 599 | 6.75e-12 | 67.8 |
| MS.gene21028.t1 | MTR_3g087480 | 33.929 | 112 | 73 | 1 | 55 | 165 | 463 | 574 | 1.58e-11 | 66.6 |
| MS.gene21028.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 7.72e-11 | 64.3 |
| MS.gene21028.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 8.23e-11 | 64.3 |
| MS.gene21028.t1 | MTR_1g030300 | 36.697 | 109 | 65 | 3 | 48 | 153 | 181 | 288 | 9.48e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21028.t1 | AT1G56440 | 52.113 | 426 | 172 | 6 | 21 | 420 | 47 | 466 | 1.54e-141 | 412 |
| MS.gene21028.t1 | AT1G56440 | 52.370 | 422 | 177 | 5 | 21 | 420 | 57 | 476 | 2.87e-141 | 412 |
| MS.gene21028.t1 | AT3G17970 | 43.750 | 112 | 60 | 2 | 39 | 149 | 467 | 576 | 1.54e-19 | 91.3 |
| MS.gene21028.t1 | AT5G09420 | 40.196 | 102 | 60 | 1 | 52 | 152 | 492 | 593 | 5.95e-15 | 77.4 |
| MS.gene21028.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 1.23e-14 | 76.3 |
| MS.gene21028.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 1.25e-14 | 76.3 |
| MS.gene21028.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 1.89e-14 | 75.5 |
| MS.gene21028.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 1.89e-14 | 75.5 |
| MS.gene21028.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 1.89e-14 | 75.5 |
| MS.gene21028.t1 | AT3G58620 | 28.144 | 167 | 114 | 2 | 44 | 204 | 445 | 611 | 9.67e-12 | 67.4 |
| MS.gene21028.t1 | AT2G42580 | 30.968 | 155 | 101 | 2 | 55 | 203 | 465 | 619 | 9.92e-12 | 67.4 |
| MS.gene21028.t1 | AT3G58620 | 28.144 | 167 | 114 | 2 | 44 | 204 | 445 | 611 | 1.32e-11 | 67.0 |
Find 80 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAGATGCTTTCATTTC+CGG | 0.172259 | 1.4:-68926946 | None:intergenic |
| TTCTGGTGATCTTGCTTTGC+AGG | 0.179423 | 1.4:+68927071 | MS.gene21028:CDS |
| TTTCAAACAGAAGAAGTTTA+AGG | 0.181327 | 1.4:+68924502 | MS.gene21028:CDS |
| GTAACGATCATCGAGATTTA+AGG | 0.189585 | 1.4:-68924856 | None:intergenic |
| CTTGCCTTCTTAGCTTTATA+TGG | 0.195569 | 1.4:-68924598 | None:intergenic |
| TTTGCAGGCTTGTCTATTAA+AGG | 0.222918 | 1.4:+68927086 | MS.gene21028:CDS |
| GATGGAGTATGCTGAGATTT+TGG | 0.222982 | 1.4:+68928759 | MS.gene21028:CDS |
| CTGCTGTAGCCTATGCAAAT+AGG | 0.267162 | 1.4:+68924567 | MS.gene21028:CDS |
| TTCTTGACTTCTTGATTGTT+AGG | 0.278082 | 1.4:-68925074 | None:intergenic |
| GGATCTAGTTGTTAGTTATA+TGG | 0.278767 | 1.4:+68927411 | MS.gene21028:CDS |
| TACAGTGTTTCTTAGTGCTT+TGG | 0.287972 | 1.4:-68926271 | None:intergenic |
| AAGTCCGAGACAAAAGTTAA+TGG | 0.348282 | 1.4:+68926306 | MS.gene21028:CDS |
| TGCTAAAGAACCACTCTTGA+TGG | 0.363324 | 1.4:+68926563 | MS.gene21028:CDS |
| CTTATCAGTTTGAGGTCTCT+TGG | 0.365519 | 1.4:+68927040 | MS.gene21028:CDS |
| TGCTGTAGCCTATGCAAATA+GGG | 0.377706 | 1.4:+68924568 | MS.gene21028:CDS |
| CTGCAGATTTGCGCAAGATC+TGG | 0.380066 | 1.4:+68928707 | MS.gene21028:intron |
| ACTAGTAGGAAATGGTTCTA+AGG | 0.403610 | 1.4:+68926632 | MS.gene21028:CDS |
| TGAAGCTCATCGTCAAATAA+AGG | 0.403993 | 1.4:+68926380 | MS.gene21028:CDS |
| TTGCCTTCTTAGCTTTATAT+GGG | 0.409244 | 1.4:-68924597 | None:intergenic |
| AACTACAGCTTATCAGTTTG+AGG | 0.411492 | 1.4:+68927032 | MS.gene21028:CDS |
| ATCAAGAGTGGTTCTTTAGC+AGG | 0.431104 | 1.4:-68926561 | None:intergenic |
| TGCAAGCCACAGCTTGGAAC+AGG | 0.445688 | 1.4:+68926665 | MS.gene21028:CDS |
| AAGCTATTGATTGCTATTCA+AGG | 0.460436 | 1.4:+68924525 | MS.gene21028:CDS |
| CGATCAATGGGTGTGGAGAA+TGG | 0.466470 | 1.4:+68924058 | None:intergenic |
| AACTAGCAAGGTAGAAGATA+AGG | 0.472186 | 1.4:-68927264 | None:intergenic |
| ACTCAAGGACTAGTAGGAAA+TGG | 0.489220 | 1.4:+68926624 | MS.gene21028:CDS |
| TCTTTCTCAGAAGCAGCATC+AGG | 0.489375 | 1.4:-68924199 | None:intergenic |
| GTGCCTTCCATCTGCTGCTA+AGG | 0.493227 | 1.4:+68927474 | MS.gene21028:CDS |
| AGTTTGAGGTCTCTTGGAGA+GGG | 0.494603 | 1.4:+68927046 | MS.gene21028:CDS |
| GTTCTTTGCAGCTTCAGCCA+TGG | 0.504037 | 1.4:-68926998 | None:intergenic |
| CTTCCATCTGCTGCTAAGGA+TGG | 0.507298 | 1.4:+68927478 | MS.gene21028:CDS |
| TGCCGAGTTTGCCATGAGGT+TGG | 0.507363 | 1.4:+68925049 | MS.gene21028:CDS |
| CTGCGCTGAGGCAACTCCGA+TGG | 0.507557 | 1.4:+68928741 | MS.gene21028:CDS |
| CAGTTTGAGGTCTCTTGGAG+AGG | 0.513770 | 1.4:+68927045 | MS.gene21028:CDS |
| GATGGAGGAGATCACTAGTA+AGG | 0.515376 | 1.4:+68926581 | MS.gene21028:CDS |
| CACATCAAATCTCGGTACCT+TGG | 0.515743 | 1.4:-68927443 | None:intergenic |
| TCAAGCTGCTTCTCGAGCCA+TGG | 0.518342 | 1.4:+68926981 | MS.gene21028:CDS |
| ATTGTTAGGTTCCAACCTCA+TGG | 0.526662 | 1.4:-68925060 | None:intergenic |
| TGGCCCATATAAAGCTAAGA+AGG | 0.528942 | 1.4:+68924594 | MS.gene21028:CDS |
| GAGTCGTGTGAGTAGCAGTT+TGG | 0.530179 | 1.4:+68924162 | MS.gene21028:CDS |
| GGTGTGGAGAATGGATCAAA+AGG | 0.534741 | 1.4:+68924067 | MS.gene21028:CDS |
| GAGAAATCATAAAACTAAGC+CGG | 0.536442 | 1.4:+68926927 | MS.gene21028:intron |
| AACTGATAAGCTGTAGTTGG+TGG | 0.540121 | 1.4:-68927027 | None:intergenic |
| GGCTACAGCAGTGGGTGAGA+AGG | 0.545729 | 1.4:-68924555 | None:intergenic |
| ATTTGACGATGAGCTTCAGT+TGG | 0.547813 | 1.4:-68926375 | None:intergenic |
| TTCCAACCTCATGGCAAACT+CGG | 0.550264 | 1.4:-68925051 | None:intergenic |
| AGCAGGACTCAAGGACTAGT+AGG | 0.551356 | 1.4:+68926618 | MS.gene21028:CDS |
| CTCCGATCAAAATTCTACCT+TGG | 0.554742 | 1.4:+68928787 | MS.gene21028:CDS |
| CAAGTGAGTGTCACTGTCCA+AGG | 0.558456 | 1.4:-68928804 | None:intergenic |
| CAGCAGATTTCAAGAGGCTG+AGG | 0.559168 | 1.4:+68924818 | MS.gene21028:intron |
| TCAAACTGATAAGCTGTAGT+TGG | 0.559212 | 1.4:-68927030 | None:intergenic |
| AGCATGCTCTCGGCGAGCAA+CGG | 0.561922 | 1.4:+68924884 | MS.gene21028:CDS |
| GTAGGAAATGGTTCTAAGGA+AGG | 0.565761 | 1.4:+68926636 | MS.gene21028:CDS |
| TTATAATGCAAGCCACAGCT+TGG | 0.565861 | 1.4:+68926659 | MS.gene21028:CDS |
| AGGATACAAAATCTGCAAGC+AGG | 0.568821 | 1.4:+68926601 | MS.gene21028:CDS |
| GAGTGATCGATCAATGGGTG+TGG | 0.570518 | 1.4:+68924051 | None:intergenic |
| GCTTAACCTGTTCCAAGCTG+TGG | 0.570744 | 1.4:-68926671 | None:intergenic |
| CATCCTTAGCAGCAGATGGA+AGG | 0.573037 | 1.4:-68927477 | None:intergenic |
| ATACCATCCTTAGCAGCAGA+TGG | 0.576009 | 1.4:-68927481 | None:intergenic |
| AAATCTGCAAGCAGGACTCA+AGG | 0.576402 | 1.4:+68926609 | MS.gene21028:CDS |
| GCAACGGCTAGAAAAGAACT+TGG | 0.576648 | 1.4:+68924900 | MS.gene21028:CDS |
| GGCCATTGCCCTATTTGCAT+AGG | 0.577379 | 1.4:-68924576 | None:intergenic |
| CTCGTACAGTGACTTAGCAT+CGG | 0.584635 | 1.4:-68925105 | None:intergenic |
| ATTACGATCACATCAAATCT+CGG | 0.593584 | 1.4:-68927451 | None:intergenic |
| ATGTGTCAGCAGATTTCAAG+AGG | 0.608715 | 1.4:+68924812 | MS.gene21028:intron |
| TTTGCATAGGCTACAGCAGT+GGG | 0.613483 | 1.4:-68924563 | None:intergenic |
| AGCCTATGCAAATAGGGCAA+TGG | 0.619385 | 1.4:+68924574 | MS.gene21028:CDS |
| GTTACATAAAAGCATGCTCT+CGG | 0.621286 | 1.4:+68924874 | MS.gene21028:CDS |
| CTTGATGATCTCAACTAGCA+AGG | 0.623850 | 1.4:-68927276 | None:intergenic |
| AAAATCTCAGCATACTCCAT+CGG | 0.624335 | 1.4:-68928757 | None:intergenic |
| TGCTGCTTCTGAGAAAGACC+TGG | 0.631182 | 1.4:+68924204 | MS.gene21028:CDS |
| TGCTAAGTCACTGTACGAGA+AGG | 0.634474 | 1.4:+68925109 | MS.gene21028:CDS |
| TAGTACTATGTGAAACAGAG+TGG | 0.636916 | 1.4:-68926341 | None:intergenic |
| ATTTGCATAGGCTACAGCAG+TGG | 0.647481 | 1.4:-68924564 | None:intergenic |
| GTGATCTCCTCCATCAAGAG+TGG | 0.650649 | 1.4:-68926573 | None:intergenic |
| TTATATGGATAATTTAACCA+AGG | 0.659529 | 1.4:+68927426 | MS.gene21028:CDS |
| TAAAGAACCACTCTTGATGG+AGG | 0.671168 | 1.4:+68926566 | MS.gene21028:CDS |
| GGCTGAGGATGACTGTACAG+AGG | 0.702052 | 1.4:+68924833 | MS.gene21028:CDS |
| CAGATGCCGAGTTTGCCATG+AGG | 0.707223 | 1.4:+68925045 | MS.gene21028:intron |
| ATACTTGTCAGGGTAATGAG+CGG | 0.714762 | 1.4:+68926532 | MS.gene21028:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTTTCACTAAATTA+TGG | + | chr1.4:68924656-68924675 | MS.gene21028:intron | 10.0% |
| !! | AAGAAAAAGTAAACTTATTT+CGG | - | chr1.4:68928545-68928564 | None:intergenic | 15.0% |
| !! | TAGCAATAATAAATAGATTA+TGG | + | chr1.4:68924404-68924423 | MS.gene21028:intron | 15.0% |
| !!! | TTCTATTTTAATAGCTATAT+AGG | + | chr1.4:68925202-68925221 | MS.gene21028:intron | 15.0% |
| !! | AAAAATAAAGAATCAATGGA+GGG | + | chr1.4:68924924-68924943 | MS.gene21028:CDS | 20.0% |
| !! | AAACAAAAAGGGAAATAAAT+GGG | + | chr1.4:68925997-68926016 | MS.gene21028:intron | 20.0% |
| !! | AATAAATACTTACGCAAAAA+AGG | - | chr1.4:68927312-68927331 | None:intergenic | 20.0% |
| !! | CTTTAAATCACCTTAAAAAT+TGG | + | chr1.4:68925964-68925983 | MS.gene21028:intron | 20.0% |
| !! | GGTGATTTAAAGAATTTATA+CGG | - | chr1.4:68925956-68925975 | None:intergenic | 20.0% |
| !! | TATCAACATAATCAAACTTA+AGG | - | chr1.4:68926515-68926534 | None:intergenic | 20.0% |
| !! | TTATATGGATAATTTAACCA+AGG | + | chr1.4:68927426-68927445 | MS.gene21028:CDS | 20.0% |
| !! | TTTAAATTCTGCAAAAAGAT+AGG | - | chr1.4:68927692-68927711 | None:intergenic | 20.0% |
| !! | TTTAGAAGCAAAACTTATTT+AGG | + | chr1.4:68926758-68926777 | MS.gene21028:intron | 20.0% |
| !!! | AAACAATTTTTTTATCCACA+GGG | - | chr1.4:68927970-68927989 | None:intergenic | 20.0% |
| !!! | AAGGCATTTTTGAATATTTT+CGG | - | chr1.4:68927248-68927267 | None:intergenic | 20.0% |
| !!! | GAAATCTTTTGAAAGTTTAT+AGG | + | chr1.4:68927561-68927580 | MS.gene21028:intron | 20.0% |
| !!! | GGTATGTATGTTTTTTATTA+GGG | + | chr1.4:68927499-68927518 | MS.gene21028:intron | 20.0% |
| !!! | GTATGTATGTTTTTTATTAG+GGG | + | chr1.4:68927500-68927519 | MS.gene21028:intron | 20.0% |
| !!! | TAGATATATTGTTATTTCCA+TGG | + | chr1.4:68926436-68926455 | MS.gene21028:intron | 20.0% |
| !!! | TATTATATTGCTGTGATTTT+AGG | + | chr1.4:68926815-68926834 | MS.gene21028:intron | 20.0% |
| !!! | TGGTATGTATGTTTTTTATT+AGG | + | chr1.4:68927498-68927517 | MS.gene21028:intron | 20.0% |
| !!! | TGGTGCAAAATTTAAATTTT+AGG | + | chr1.4:68925261-68925280 | MS.gene21028:intron | 20.0% |
| !!! | TTTACTTGAGTTTTAATTCA+GGG | - | chr1.4:68927763-68927782 | None:intergenic | 20.0% |
| ! | AAAACTACTTTCTGATCTTT+AGG | - | chr1.4:68924701-68924720 | None:intergenic | 25.0% |
| ! | AAACTGATGTTTAACAACAT+TGG | + | chr1.4:68925512-68925531 | MS.gene21028:intron | 25.0% |
| ! | AAATCACCTTAAAAATTGGA+GGG | + | chr1.4:68925968-68925987 | MS.gene21028:intron | 25.0% |
| ! | AACAAAAAGGGAAATAAATG+GGG | + | chr1.4:68925998-68926017 | MS.gene21028:intron | 25.0% |
| ! | AACAGAAGACTTCAAAATTA+AGG | - | chr1.4:68925668-68925687 | None:intergenic | 25.0% |
| ! | ACACCAAAAATATGTAAAAC+AGG | - | chr1.4:68926894-68926913 | None:intergenic | 25.0% |
| ! | AGATGTAAGATTACTTTGTT+TGG | + | chr1.4:68926466-68926485 | MS.gene21028:intron | 25.0% |
| ! | AGTGATATATACTAGTCATA+AGG | + | chr1.4:68925637-68925656 | MS.gene21028:intron | 25.0% |
| ! | ATGTGGTAATTAAGTAATGA+GGG | - | chr1.4:68928449-68928468 | None:intergenic | 25.0% |
| ! | CAAAAATAAAGAATCAATGG+AGG | + | chr1.4:68924923-68924942 | MS.gene21028:CDS | 25.0% |
| ! | CAAACAAAAAGGGAAATAAA+TGG | + | chr1.4:68925996-68926015 | MS.gene21028:intron | 25.0% |
| ! | GTGATATATACTAGTCATAA+GGG | + | chr1.4:68925638-68925657 | MS.gene21028:intron | 25.0% |
| ! | TAAATCACCTTAAAAATTGG+AGG | + | chr1.4:68925967-68925986 | MS.gene21028:intron | 25.0% |
| ! | TCAAAAGATTTCAAAAAGTG+TGG | - | chr1.4:68927553-68927572 | None:intergenic | 25.0% |
| ! | TCACAGCAATATAATAAAAC+TGG | - | chr1.4:68926811-68926830 | None:intergenic | 25.0% |
| ! | TGCTAAAATAATGATCTGTT+GGG | - | chr1.4:68924389-68924408 | None:intergenic | 25.0% |
| ! | TGGCAAAAATAAAGAATCAA+TGG | + | chr1.4:68924920-68924939 | MS.gene21028:CDS | 25.0% |
| ! | TTAAAACAAAAGATGTAACG+AGG | + | chr1.4:68928194-68928213 | MS.gene21028:intron | 25.0% |
| ! | TTATCCAACCAATCAAATTT+GGG | + | chr1.4:68927823-68927842 | MS.gene21028:intron | 25.0% |
| ! | TTGCTAAAATAATGATCTGT+TGG | - | chr1.4:68924390-68924409 | None:intergenic | 25.0% |
| ! | TTTATCCAACCAATCAAATT+TGG | + | chr1.4:68927822-68927841 | MS.gene21028:intron | 25.0% |
| ! | TTTCAAACAGAAGAAGTTTA+AGG | + | chr1.4:68924502-68924521 | MS.gene21028:CDS | 25.0% |
| !! | AATATTTTCGGTAATTCATG+GGG | - | chr1.4:68927236-68927255 | None:intergenic | 25.0% |
| !! | AATTTGTTCATTCGAAACTT+TGG | - | chr1.4:68925815-68925834 | None:intergenic | 25.0% |
| !! | ATAAAACTGGCAAAAGTTTT+AGG | - | chr1.4:68926798-68926817 | None:intergenic | 25.0% |
| !! | ATGTTGTTAAACATCAGTTT+TGG | - | chr1.4:68925512-68925531 | None:intergenic | 25.0% |
| !! | CATTAGAAAGACTTTAGAAA+CGG | + | chr1.4:68925412-68925431 | MS.gene21028:intron | 25.0% |
| !! | GAATATTTTCGGTAATTCAT+GGG | - | chr1.4:68927237-68927256 | None:intergenic | 25.0% |
| !! | TAAAACTGGCAAAAGTTTTA+GGG | - | chr1.4:68926797-68926816 | None:intergenic | 25.0% |
| !! | TGAATATTTTCGGTAATTCA+TGG | - | chr1.4:68927238-68927257 | None:intergenic | 25.0% |
| !! | TGTCCTGTTTTACATATTTT+TGG | + | chr1.4:68926888-68926907 | MS.gene21028:intron | 25.0% |
| !! | TTGATTGGTTGGATAAAATA+TGG | - | chr1.4:68927819-68927838 | None:intergenic | 25.0% |
| !! | TTGGTTTAGAGGAATATTTT+GGG | + | chr1.4:68925531-68925550 | MS.gene21028:intron | 25.0% |
| !!! | ATTGGTTTAGAGGAATATTT+TGG | + | chr1.4:68925530-68925549 | MS.gene21028:intron | 25.0% |
| !!! | GAAACAATTTTTTTATCCAC+AGG | - | chr1.4:68927971-68927990 | None:intergenic | 25.0% |
| !!! | GAAGTTTTAAAGTAAAAGCA+TGG | + | chr1.4:68928151-68928170 | MS.gene21028:intron | 25.0% |
| !!! | GGAACATAACATTTAACTTT+TGG | + | chr1.4:68928493-68928512 | MS.gene21028:intron | 25.0% |
| !!! | GTTTACTTGAGTTTTAATTC+AGG | - | chr1.4:68927764-68927783 | None:intergenic | 25.0% |
| !!! | TCTATTTTTGTTTTCGTGTT+AGG | + | chr1.4:68927202-68927221 | MS.gene21028:intron | 25.0% |
| !!! | TGATAACGAATTTTCTCTTT+TGG | + | chr1.4:68927376-68927395 | MS.gene21028:intron | 25.0% |
| !!! | TTATTTGGCTCTCTTTTTTT+TGG | + | chr1.4:68928628-68928647 | MS.gene21028:intron | 25.0% |
| !!! | TTTTAAAATTCCTTTTGTCC+AGG | + | chr1.4:68926230-68926249 | MS.gene21028:intron | 25.0% |
| AAACAATATATGGTGCAGTT+CGG | - | chr1.4:68928308-68928327 | None:intergenic | 30.0% | |
| AACATAATCAAACTTAAGGC+CGG | - | chr1.4:68926511-68926530 | None:intergenic | 30.0% | |
| AACGAGGACAGAATATAAAT+TGG | + | chr1.4:68928210-68928229 | MS.gene21028:intron | 30.0% | |
| AAGAAACACTGTAGAAAAAG+TGG | + | chr1.4:68926281-68926300 | MS.gene21028:CDS | 30.0% | |
| AATCACCTTAAAAATTGGAG+GGG | + | chr1.4:68925969-68925988 | MS.gene21028:intron | 30.0% | |
| ACGAGGACAGAATATAAATT+GGG | + | chr1.4:68928211-68928230 | MS.gene21028:intron | 30.0% | |
| ACTTACTGTCATGTGTTAAT+TGG | + | chr1.4:68924723-68924742 | MS.gene21028:intron | 30.0% | |
| AGAAACACTGTAGAAAAAGT+GGG | + | chr1.4:68926282-68926301 | MS.gene21028:CDS | 30.0% | |
| AGGTTTCATGAAACATGTTT+AGG | + | chr1.4:68927581-68927600 | MS.gene21028:intron | 30.0% | |
| ATGACTATAATAAGCCAAAC+CGG | + | chr1.4:68928087-68928106 | MS.gene21028:intron | 30.0% | |
| ATGCTTTATGTAGAATTTCC+TGG | - | chr1.4:68926251-68926270 | None:intergenic | 30.0% | |
| ATGTAAAACAGGACAATGAA+CGG | - | chr1.4:68926883-68926902 | None:intergenic | 30.0% | |
| ATTACCCTGTAATATACAGA+TGG | - | chr1.4:68924477-68924496 | None:intergenic | 30.0% | |
| ATTACGATCACATCAAATCT+CGG | - | chr1.4:68927454-68927473 | None:intergenic | 30.0% | |
| ATTATTACATGACTACTGGA+AGG | + | chr1.4:68925154-68925173 | MS.gene21028:intron | 30.0% | |
| ATTGTGCATCCTTATCAATA+AGG | + | chr1.4:68928370-68928389 | MS.gene21028:intron | 30.0% | |
| CAAAATGTGTAATATCTTCC+TGG | + | chr1.4:68927860-68927879 | MS.gene21028:intron | 30.0% | |
| CAATCCATCTGTATATTACA+GGG | + | chr1.4:68924470-68924489 | MS.gene21028:intron | 30.0% | |
| CACATAGTACTAAAAAGTCA+GGG | + | chr1.4:68926352-68926371 | MS.gene21028:CDS | 30.0% | |
| CATGTGGTAATTAAGTAATG+AGG | - | chr1.4:68928450-68928469 | None:intergenic | 30.0% | |
| CATTCTTTCCCAAATTTGAT+TGG | - | chr1.4:68927834-68927853 | None:intergenic | 30.0% | |
| CTAAAGAAATGATATTGGGT+GGG | + | chr1.4:68924334-68924353 | MS.gene21028:intron | 30.0% | |
| CTGTATTATTACATGACTAC+TGG | + | chr1.4:68925150-68925169 | MS.gene21028:intron | 30.0% | |
| CTTAGATTTAGTAGTTAGGA+TGG | + | chr1.4:68925374-68925393 | MS.gene21028:intron | 30.0% | |
| GACACAAGTCAAACAATATA+TGG | - | chr1.4:68928318-68928337 | None:intergenic | 30.0% | |
| GAGAAATCATAAAACTAAGC+CGG | + | chr1.4:68926927-68926946 | MS.gene21028:intron | 30.0% | |
| GATGTCTTAAAGCAAGATTT+GGG | + | chr1.4:68925341-68925360 | MS.gene21028:intron | 30.0% | |
| GATTATGTTGATACTTGTCA+GGG | + | chr1.4:68926522-68926541 | MS.gene21028:intron | 30.0% | |
| GGAAATAAATGGGGATTTAA+TGG | + | chr1.4:68926007-68926026 | MS.gene21028:intron | 30.0% | |
| GGATCTAGTTGTTAGTTATA+TGG | + | chr1.4:68927411-68927430 | MS.gene21028:CDS | 30.0% | |
| GTGAAAACAACTTTGTAACT+AGG | - | chr1.4:68928015-68928034 | None:intergenic | 30.0% | |
| TCAATCCATCTGTATATTAC+AGG | + | chr1.4:68924469-68924488 | MS.gene21028:intron | 30.0% | |
| TCACATAGTACTAAAAAGTC+AGG | + | chr1.4:68926351-68926370 | MS.gene21028:CDS | 30.0% | |
| TCCTACAGCAAATATATACA+AGG | - | chr1.4:68928037-68928056 | None:intergenic | 30.0% | |
| TCTAAAGAAATGATATTGGG+TGG | + | chr1.4:68924333-68924352 | MS.gene21028:intron | 30.0% | |
| TGAAGAAAGGAATAAGAAAG+AGG | + | chr1.4:68927605-68927624 | MS.gene21028:intron | 30.0% | |
| TGAATGAATGACACATTTCT+TGG | + | chr1.4:68928123-68928142 | MS.gene21028:intron | 30.0% | |
| TGATGTCTTAAAGCAAGATT+TGG | + | chr1.4:68925340-68925359 | MS.gene21028:intron | 30.0% | |
| TGATTATGTTGATACTTGTC+AGG | + | chr1.4:68926521-68926540 | MS.gene21028:intron | 30.0% | |
| TGTATGCAATTATGTACTGA+TGG | - | chr1.4:68925292-68925311 | None:intergenic | 30.0% | |
| TTAGAGCCATGTTACATAAA+GGG | - | chr1.4:68924318-68924337 | None:intergenic | 30.0% | |
| TTCTTGACTTCTTGATTGTT+AGG | - | chr1.4:68925077-68925096 | None:intergenic | 30.0% | |
| ! | AAAGCAAGATTTGGGATTAA+AGG | + | chr1.4:68925349-68925368 | MS.gene21028:intron | 30.0% |
| ! | AAATTTTGCACCAACTCTAA+CGG | - | chr1.4:68925254-68925273 | None:intergenic | 30.0% |
| ! | AACTCAAGTAAACTCAGTTT+TGG | + | chr1.4:68927771-68927790 | MS.gene21028:intron | 30.0% |
| ! | AAGCAAGATTTGGGATTAAA+GGG | + | chr1.4:68925350-68925369 | MS.gene21028:intron | 30.0% |
| ! | AAGCTATTGATTGCTATTCA+AGG | + | chr1.4:68924525-68924544 | MS.gene21028:CDS | 30.0% |
| ! | ATTTTTACAAGACAATAGGG+AGG | + | chr1.4:68928235-68928254 | MS.gene21028:intron | 30.0% |
| ! | CAGAAGTACAGCATATATAA+TGG | - | chr1.4:68927163-68927182 | None:intergenic | 30.0% |
| ! | GGATTGTTAGGATCTATTTT+AGG | + | chr1.4:68925761-68925780 | MS.gene21028:intron | 30.0% |
| ! | GGGATTTTTACAAGACAATA+GGG | + | chr1.4:68928232-68928251 | MS.gene21028:intron | 30.0% |
| ! | GTATATATCACTCGTTTTCA+TGG | - | chr1.4:68925629-68925648 | None:intergenic | 30.0% |
| ! | TTTAGAGCCATGTTACATAA+AGG | - | chr1.4:68924319-68924338 | None:intergenic | 30.0% |
| !! | AAAACTGGCAAAAGTTTTAG+GGG | - | chr1.4:68926796-68926815 | None:intergenic | 30.0% |
| !! | ACCTTGTATATATTTGCTGT+AGG | + | chr1.4:68928033-68928052 | MS.gene21028:intron | 30.0% |
| !! | CTTTTCATGCTGTTGTTATT+TGG | + | chr1.4:68928613-68928632 | MS.gene21028:intron | 30.0% |
| !! | GGCTCTAAAGAAATGATATT+GGG | + | chr1.4:68924330-68924349 | MS.gene21028:intron | 30.0% |
| !! | GTTTAACAACATTGGTTTAG+AGG | + | chr1.4:68925520-68925539 | MS.gene21028:intron | 30.0% |
| !! | TGGCTCTAAAGAAATGATAT+TGG | + | chr1.4:68924329-68924348 | MS.gene21028:intron | 30.0% |
| !! | TTGCCTTCTTAGCTTTATAT+GGG | - | chr1.4:68924600-68924619 | None:intergenic | 30.0% |
| AAAATCTCAGCATACTCCAT+CGG | - | chr1.4:68928760-68928779 | None:intergenic | 35.0% | |
| AAACTCGGCATCTGTAATTT+AGG | - | chr1.4:68925039-68925058 | None:intergenic | 35.0% | |
| AACAGAACCACAATACACAA+TGG | - | chr1.4:68926740-68926759 | None:intergenic | 35.0% | |
| AACAGCTCAATCCAATTAGA+TGG | - | chr1.4:68928679-68928698 | None:intergenic | 35.0% | |
| AACATGTTTAGGCTGAAGAA+AGG | + | chr1.4:68927592-68927611 | MS.gene21028:intron | 35.0% | |
| AACTACAGCTTATCAGTTTG+AGG | + | chr1.4:68927032-68927051 | MS.gene21028:CDS | 35.0% | |
| AACTAGCAAGGTAGAAGATA+AGG | - | chr1.4:68927267-68927286 | None:intergenic | 35.0% | |
| AACTCGGCATCTGTAATTTA+GGG | - | chr1.4:68925038-68925057 | None:intergenic | 35.0% | |
| AAGACCAAAATAGTTAGGAG+AGG | - | chr1.4:68924244-68924263 | None:intergenic | 35.0% | |
| AAGTCCGAGACAAAAGTTAA+TGG | + | chr1.4:68926306-68926325 | MS.gene21028:CDS | 35.0% | |
| AATATCTTCCTGGCAGTAAT+AGG | + | chr1.4:68927870-68927889 | MS.gene21028:intron | 35.0% | |
| ACATTACTAGACGATAAGAG+TGG | - | chr1.4:68926713-68926732 | None:intergenic | 35.0% | |
| AGAACAGTTAACAACACACT+AGG | - | chr1.4:68926160-68926179 | None:intergenic | 35.0% | |
| AGACCAAAATAGTTAGGAGA+GGG | - | chr1.4:68924243-68924262 | None:intergenic | 35.0% | |
| ATGACACTTACTTTATGACC+AGG | + | chr1.4:68926111-68926130 | MS.gene21028:intron | 35.0% | |
| CAAATTCAACAGAGTTCAAG+CGG | + | chr1.4:68925829-68925848 | MS.gene21028:intron | 35.0% | |
| CGAGGACAGAATATAAATTG+GGG | + | chr1.4:68928212-68928231 | MS.gene21028:intron | 35.0% | |
| CTTTCCCAAATTTGATTGGT+TGG | - | chr1.4:68927830-68927849 | None:intergenic | 35.0% | |
| GGAATGTCTTCATTTAACAC+TGG | - | chr1.4:68928261-68928280 | None:intergenic | 35.0% | |
| GTAACGATCATCGAGATTTA+AGG | - | chr1.4:68924859-68924878 | None:intergenic | 35.0% | |
| GTGAAACCCTTTATGTAACA+TGG | + | chr1.4:68924309-68924328 | MS.gene21028:intron | 35.0% | |
| TACAGTGTTTCTTAGTGCTT+TGG | - | chr1.4:68926274-68926293 | None:intergenic | 35.0% | |
| TACGCAAGACCAAAATAGTT+AGG | - | chr1.4:68924249-68924268 | None:intergenic | 35.0% | |
| TAGTACTATGTGAAACAGAG+TGG | - | chr1.4:68926344-68926363 | None:intergenic | 35.0% | |
| TCAAACTGATAAGCTGTAGT+TGG | - | chr1.4:68927033-68927052 | None:intergenic | 35.0% | |
| TCAACAGATGCTTTCATTTC+CGG | - | chr1.4:68926949-68926968 | None:intergenic | 35.0% | |
| TGAAGCTCATCGTCAAATAA+AGG | + | chr1.4:68926380-68926399 | MS.gene21028:CDS | 35.0% | |
| TGTAAAACAGGACAATGAAC+GGG | - | chr1.4:68926882-68926901 | None:intergenic | 35.0% | |
| TGTAGAATTTCCTGGACAAA+AGG | - | chr1.4:68926243-68926262 | None:intergenic | 35.0% | |
| TGTAGTTCCATTGTGTATTG+TGG | + | chr1.4:68926730-68926749 | MS.gene21028:intron | 35.0% | |
| TTTATCCACAGGGAAAATGT+GGG | - | chr1.4:68927960-68927979 | None:intergenic | 35.0% | |
| TTTGCAAGAAAATGCATTGG+TGG | + | chr1.4:68925909-68925928 | MS.gene21028:intron | 35.0% | |
| TTTGCAGGCTTGTCTATTAA+AGG | + | chr1.4:68927086-68927105 | MS.gene21028:CDS | 35.0% | |
| TTTGTAAGCAAGTCACTAAG+AGG | - | chr1.4:68928579-68928598 | None:intergenic | 35.0% | |
| ! | AACATATTTGCTGCTGGATA+AGG | + | chr1.4:68925881-68925900 | MS.gene21028:intron | 35.0% |
| ! | ACTAGTAGGAAATGGTTCTA+AGG | + | chr1.4:68926632-68926651 | MS.gene21028:CDS | 35.0% |
| ! | AGCAAGATTTGGGATTAAAG+GGG | + | chr1.4:68925351-68925370 | MS.gene21028:intron | 35.0% |
| ! | CTAGAAAACATATTTGCTGC+TGG | + | chr1.4:68925875-68925894 | MS.gene21028:intron | 35.0% |
| ! | GACATCAACTCGTTTGATTT+AGG | - | chr1.4:68925327-68925346 | None:intergenic | 35.0% |
| ! | GCTTCCATTAACTTTTGTCT+CGG | - | chr1.4:68926313-68926332 | None:intergenic | 35.0% |
| ! | GGGGATTTTTACAAGACAAT+AGG | + | chr1.4:68928231-68928250 | MS.gene21028:intron | 35.0% |
| ! | GTTACATAAAAGCATGCTCT+CGG | + | chr1.4:68924874-68924893 | MS.gene21028:CDS | 35.0% |
| ! | TTTCCCTCTCCTAACTATTT+TGG | + | chr1.4:68924237-68924256 | MS.gene21028:intron | 35.0% |
| ! | TTTTATCCACAGGGAAAATG+TGG | - | chr1.4:68927961-68927980 | None:intergenic | 35.0% |
| !! | CAAGTAAACTCAGTTTTGGT+GGG | + | chr1.4:68927775-68927794 | MS.gene21028:intron | 35.0% |
| !! | CTTGCCTTCTTAGCTTTATA+TGG | - | chr1.4:68924601-68924620 | None:intergenic | 35.0% |
| !! | GTCCAAGGTAGAATTTTGAT+CGG | - | chr1.4:68928792-68928811 | None:intergenic | 35.0% |
| !! | GTGGGGCAAATTAATTTGTT+CGG | + | chr1.4:68924274-68924293 | MS.gene21028:intron | 35.0% |
| !! | TCAAGTAAACTCAGTTTTGG+TGG | + | chr1.4:68927774-68927793 | MS.gene21028:intron | 35.0% |
| !!! | AATGCTCGTAAAGAGCATTT+TGG | + | chr1.4:68924760-68924779 | MS.gene21028:intron | 35.0% |
| !!! | CCTTATGGGGCAATTTTTTA+GGG | + | chr1.4:68925706-68925725 | MS.gene21028:intron | 35.0% |
| !!! | TATTTTGGTCTTGCGTAACA+GGG | + | chr1.4:68924252-68924271 | MS.gene21028:intron | 35.0% |
| AACTGATAAGCTGTAGTTGG+TGG | - | chr1.4:68927030-68927049 | None:intergenic | 40.0% | |
| AGAAGAGCTCCAACCAAAAT+TGG | + | chr1.4:68928407-68928426 | MS.gene21028:intron | 40.0% | |
| AGATCCTAACAATCCTTTCC+TGG | - | chr1.4:68925756-68925775 | None:intergenic | 40.0% | |
| AGGATACAAAATCTGCAAGC+AGG | + | chr1.4:68926601-68926620 | MS.gene21028:CDS | 40.0% | |
| ATAATAAGCCAAACCGGTTG+TGG | + | chr1.4:68928093-68928112 | MS.gene21028:intron | 40.0% | |
| ATACTTGTCAGGGTAATGAG+CGG | + | chr1.4:68926532-68926551 | MS.gene21028:intron | 40.0% | |
| ATATTGGGTGGGAAATCAGA+TGG | + | chr1.4:68924345-68924364 | MS.gene21028:intron | 40.0% | |
| ATCAAGAGTGGTTCTTTAGC+AGG | - | chr1.4:68926564-68926583 | None:intergenic | 40.0% | |
| ATCTTCAGCATCACACAAGA+CGG | - | chr1.4:68924446-68924465 | None:intergenic | 40.0% | |
| ATGACTACTGGAAGGAAACA+TGG | + | chr1.4:68925162-68925181 | MS.gene21028:intron | 40.0% | |
| ATGGGGATTTAATGGTCTGT+TGG | + | chr1.4:68926015-68926034 | MS.gene21028:intron | 40.0% | |
| ATGTGTCAGCAGATTTCAAG+AGG | + | chr1.4:68924812-68924831 | MS.gene21028:intron | 40.0% | |
| ATTGTTAGGTTCCAACCTCA+TGG | - | chr1.4:68925063-68925082 | None:intergenic | 40.0% | |
| ATTTGACGATGAGCTTCAGT+TGG | - | chr1.4:68926378-68926397 | None:intergenic | 40.0% | |
| CAGACAAGGATGATATGTCA+TGG | - | chr1.4:68928282-68928301 | None:intergenic | 40.0% | |
| CCCTAAAAAATTGCCCCATA+AGG | - | chr1.4:68925709-68925728 | None:intergenic | 40.0% | |
| CTACCTCCATTATGGAGTTT+GGG | + | chr1.4:68927920-68927939 | MS.gene21028:intron | 40.0% | |
| CTCCGATCAAAATTCTACCT+TGG | + | chr1.4:68928787-68928806 | MS.gene21028:CDS | 40.0% | |
| CTGTTTGTCAGCATAGATTC+AGG | + | chr1.4:68925683-68925702 | MS.gene21028:intron | 40.0% | |
| CTTGAAATCTGCTGACACAT+AGG | - | chr1.4:68924812-68924831 | None:intergenic | 40.0% | |
| CTTTGTAACTAGGTAGTCAG+AGG | - | chr1.4:68928005-68928024 | None:intergenic | 40.0% | |
| GCTCTTTACGAGCATTAGTA+AGG | - | chr1.4:68924756-68924775 | None:intergenic | 40.0% | |
| GGGGCTTAGATTTAGTAGTT+AGG | + | chr1.4:68925370-68925389 | MS.gene21028:intron | 40.0% | |
| GGGTATATCAAAAGCCACTA+TGG | - | chr1.4:68926041-68926060 | None:intergenic | 40.0% | |
| GGGTTTGCAAGAAAATGCAT+TGG | + | chr1.4:68925906-68925925 | MS.gene21028:intron | 40.0% | |
| GTAAAACAGGACAATGAACG+GGG | - | chr1.4:68926881-68926900 | None:intergenic | 40.0% | |
| TAAAGAACCACTCTTGATGG+AGG | + | chr1.4:68926566-68926585 | MS.gene21028:CDS | 40.0% | |
| TCCAATTAGATGGACAACTC+TGG | - | chr1.4:68928669-68928688 | None:intergenic | 40.0% | |
| TCTTACATCTGTCTCATCCA+TGG | - | chr1.4:68926456-68926475 | None:intergenic | 40.0% | |
| TGCTAAAGAACCACTCTTGA+TGG | + | chr1.4:68926563-68926582 | MS.gene21028:CDS | 40.0% | |
| TGCTGTAGCCTATGCAAATA+GGG | + | chr1.4:68924568-68924587 | MS.gene21028:CDS | 40.0% | |
| TGGCCCATATAAAGCTAAGA+AGG | + | chr1.4:68924594-68924613 | MS.gene21028:CDS | 40.0% | |
| TTATAATGCAAGCCACAGCT+TGG | + | chr1.4:68926659-68926678 | MS.gene21028:CDS | 40.0% | |
| TTCCTGGCAGTAATAGGAAA+AGG | + | chr1.4:68927876-68927895 | MS.gene21028:intron | 40.0% | |
| ! | AAGACTTTAGAAACGGAACG+AGG | + | chr1.4:68925419-68925438 | MS.gene21028:intron | 40.0% |
| ! | ACTCAAGGACTAGTAGGAAA+TGG | + | chr1.4:68926624-68926643 | MS.gene21028:CDS | 40.0% |
| ! | AGACTTTAGAAACGGAACGA+GGG | + | chr1.4:68925420-68925439 | MS.gene21028:intron | 40.0% |
| ! | AGCATAGATTCAGGCCTTAT+GGG | + | chr1.4:68925692-68925711 | MS.gene21028:intron | 40.0% |
| ! | AGCGGCTGACAGAATAATTT+TGG | + | chr1.4:68925847-68925866 | MS.gene21028:intron | 40.0% |
| ! | CGGCTGACAGAATAATTTTG+GGG | + | chr1.4:68925849-68925868 | MS.gene21028:intron | 40.0% |
| ! | CTTATCAGTTTGAGGTCTCT+TGG | + | chr1.4:68927040-68927059 | MS.gene21028:CDS | 40.0% |
| ! | CTTGATGATCTCAACTAGCA+AGG | - | chr1.4:68927279-68927298 | None:intergenic | 40.0% |
| ! | GATGGAGTATGCTGAGATTT+TGG | + | chr1.4:68928759-68928778 | MS.gene21028:CDS | 40.0% |
| ! | GCGGCTGACAGAATAATTTT+GGG | + | chr1.4:68925848-68925867 | MS.gene21028:intron | 40.0% |
| ! | TATTTGCTGCTGGATAAGGA+CGG | + | chr1.4:68925885-68925904 | MS.gene21028:intron | 40.0% |
| ! | TGTTTTTCCTCACTTCTCTC+TGG | + | chr1.4:68926193-68926212 | MS.gene21028:intron | 40.0% |
| !! | CAAGGTAGAATTTTGATCGG+AGG | - | chr1.4:68928789-68928808 | None:intergenic | 40.0% |
| !! | GCCACGAGCATTGAAAATAA+GGG | + | chr1.4:68925224-68925243 | MS.gene21028:intron | 40.0% |
| !! | GTAGGAAATGGTTCTAAGGA+AGG | + | chr1.4:68926636-68926655 | MS.gene21028:CDS | 40.0% |
| !!! | ACCCTTATTTTCAATGCTCG+TGG | - | chr1.4:68925228-68925247 | None:intergenic | 40.0% |
| !!! | CTATTTTGGTCTTGCGTAAC+AGG | + | chr1.4:68924251-68924270 | MS.gene21028:intron | 40.0% |
| !!! | GCCTTATGGGGCAATTTTTT+AGG | + | chr1.4:68925705-68925724 | MS.gene21028:intron | 40.0% |
| !!! | GGCAATTTTTTAGGGAAACC+TGG | + | chr1.4:68925714-68925733 | MS.gene21028:intron | 40.0% |
| AAAGGTCAGCTGCAATGCAT+AGG | + | chr1.4:68927894-68927913 | MS.gene21028:intron | 45.0% | |
| AAATCTGCAAGCAGGACTCA+AGG | + | chr1.4:68926609-68926628 | MS.gene21028:CDS | 45.0% | |
| AACCTGCCCAAACTCCATAA+TGG | - | chr1.4:68927929-68927948 | None:intergenic | 45.0% | |
| AATCTGCTGACACATAGGTG+AGG | - | chr1.4:68924807-68924826 | None:intergenic | 45.0% | |
| ACCTGACCAATTTGTGACAG+TGG | - | chr1.4:68925487-68925506 | None:intergenic | 45.0% | |
| AGCCTATGCAAATAGGGCAA+TGG | + | chr1.4:68924574-68924593 | MS.gene21028:CDS | 45.0% | |
| ATACCATCCTTAGCAGCAGA+TGG | - | chr1.4:68927484-68927503 | None:intergenic | 45.0% | |
| ATAGGTGGCTACCTCCATTA+TGG | + | chr1.4:68927912-68927931 | MS.gene21028:intron | 45.0% | |
| ATTTGCATAGGCTACAGCAG+TGG | - | chr1.4:68924567-68924586 | None:intergenic | 45.0% | |
| CACATCAAATCTCGGTACCT+TGG | - | chr1.4:68927446-68927465 | None:intergenic | 45.0% | |
| CACCTTAAAAATTGGAGGGG+CGG | + | chr1.4:68925972-68925991 | MS.gene21028:intron | 45.0% | |
| CAGCATAGATTCAGGCCTTA+TGG | + | chr1.4:68925691-68925710 | MS.gene21028:intron | 45.0% | |
| CATGCCAGGAAAGGATTGTT+AGG | + | chr1.4:68925749-68925768 | MS.gene21028:intron | 45.0% | |
| CATTCACCCATATCCACAAC+CGG | - | chr1.4:68928109-68928128 | None:intergenic | 45.0% | |
| CTCGTACAGTGACTTAGCAT+CGG | - | chr1.4:68925108-68925127 | None:intergenic | 45.0% | |
| CTGCTGTAGCCTATGCAAAT+AGG | + | chr1.4:68924567-68924586 | MS.gene21028:CDS | 45.0% | |
| GATGGAGGAGATCACTAGTA+AGG | + | chr1.4:68926581-68926600 | MS.gene21028:CDS | 45.0% | |
| GCAACGGCTAGAAAAGAACT+TGG | + | chr1.4:68924900-68924919 | MS.gene21028:CDS | 45.0% | |
| GCCAGAGTTGTCCATCTAAT+TGG | + | chr1.4:68928665-68928684 | MS.gene21028:intron | 45.0% | |
| GCTACCTCCATTATGGAGTT+TGG | + | chr1.4:68927919-68927938 | MS.gene21028:intron | 45.0% | |
| GCTGTACTTCTGCTGTTGAA+TGG | + | chr1.4:68927171-68927190 | MS.gene21028:intron | 45.0% | |
| GGTGTGGAGAATGGATCAAA+AGG | + | chr1.4:68924067-68924086 | MS.gene21028:CDS | 45.0% | |
| TAAGGGTTGACCGTTAGAGT+TGG | + | chr1.4:68925241-68925260 | MS.gene21028:intron | 45.0% | |
| TAATGGTCTGTTGGCCATAG+TGG | + | chr1.4:68926024-68926043 | MS.gene21028:intron | 45.0% | |
| TACAAAGCTCATGCCAGGAA+AGG | + | chr1.4:68925740-68925759 | MS.gene21028:intron | 45.0% | |
| TCTTTCTCAGAAGCAGCATC+AGG | - | chr1.4:68924202-68924221 | None:intergenic | 45.0% | |
| TGCTAAGTCACTGTACGAGA+AGG | + | chr1.4:68925109-68925128 | MS.gene21028:CDS | 45.0% | |
| TGTTCCTCATGCATAGTGTC+CGG | + | chr1.4:68926489-68926508 | MS.gene21028:intron | 45.0% | |
| TTCCAACCTCATGGCAAACT+CGG | - | chr1.4:68925054-68925073 | None:intergenic | 45.0% | |
| TTCTGGTGATCTTGCTTTGC+AGG | + | chr1.4:68927071-68927090 | MS.gene21028:CDS | 45.0% | |
| TTGGTTGGAGCTCTTCTCAT+AGG | - | chr1.4:68928404-68928423 | None:intergenic | 45.0% | |
| TTTATGACCAGGCTTCACGA+CGG | + | chr1.4:68926122-68926141 | MS.gene21028:intron | 45.0% | |
| TTTGCATAGGCTACAGCAGT+GGG | - | chr1.4:68924566-68924585 | None:intergenic | 45.0% | |
| ! | AAAATTGGCCTGATAGGTGG+GGG | + | chr1.4:68928422-68928441 | MS.gene21028:intron | 45.0% |
| ! | ACCAAAATTGGCCTGATAGG+TGG | + | chr1.4:68928419-68928438 | MS.gene21028:intron | 45.0% |
| ! | AGTTTGAGGTCTCTTGGAGA+GGG | + | chr1.4:68927046-68927065 | MS.gene21028:CDS | 45.0% |
| ! | ATTTGCTGCTGGATAAGGAC+GGG | + | chr1.4:68925886-68925905 | MS.gene21028:intron | 45.0% |
| ! | CAAAATTGGCCTGATAGGTG+GGG | + | chr1.4:68928421-68928440 | MS.gene21028:intron | 45.0% |
| ! | CAGTGTTATTGATGCCGTCA+AGG | + | chr1.4:68925459-68925478 | MS.gene21028:intron | 45.0% |
| ! | CCAAAATTGGCCTGATAGGT+GGG | + | chr1.4:68928420-68928439 | MS.gene21028:intron | 45.0% |
| ! | CCAACCAAAATTGGCCTGAT+AGG | + | chr1.4:68928416-68928435 | MS.gene21028:intron | 45.0% |
| ! | GAATGAAGTTTTCTGCGCTG+AGG | + | chr1.4:68928729-68928748 | MS.gene21028:CDS | 45.0% |
| ! | GACCTTTTCCTATTACTGCC+AGG | - | chr1.4:68927881-68927900 | None:intergenic | 45.0% |
| ! | GCAAGAAAATGCATTGGTGG+TGG | + | chr1.4:68925912-68925931 | MS.gene21028:intron | 45.0% |
| ! | GCATAGATTCAGGCCTTATG+GGG | + | chr1.4:68925693-68925712 | MS.gene21028:intron | 45.0% |
| !! | CCTATCAGGCCAATTTTGGT+TGG | - | chr1.4:68928419-68928438 | None:intergenic | 45.0% |
| !! | GCTCGAGAGCCTTATTGATA+AGG | - | chr1.4:68928382-68928401 | None:intergenic | 45.0% |
| !! | GGCCACGAGCATTGAAAATA+AGG | + | chr1.4:68925223-68925242 | MS.gene21028:intron | 45.0% |
| !! | GGTGGTGGAAAGAATTAGAG+TGG | + | chr1.4:68925927-68925946 | MS.gene21028:intron | 45.0% |
| ACAGGACAATGAACGGGGAT+AGG | - | chr1.4:68926876-68926895 | None:intergenic | 50.0% | |
| ACCCATATCCACAACCGGTT+TGG | - | chr1.4:68928104-68928123 | None:intergenic | 50.0% | |
| AGCCAAACCGGTTGTGGATA+TGG | + | chr1.4:68928099-68928118 | MS.gene21028:intron | 50.0% | |
| AGCCATTGCTGCCTGAATTG+AGG | - | chr1.4:68926073-68926092 | None:intergenic | 50.0% | |
| CAGCAGATTTCAAGAGGCTG+AGG | + | chr1.4:68924818-68924837 | MS.gene21028:intron | 50.0% | |
| CATCCTTAGCAGCAGATGGA+AGG | - | chr1.4:68927480-68927499 | None:intergenic | 50.0% | |
| CTCCATTATGGAGTTTGGGC+AGG | + | chr1.4:68927924-68927943 | MS.gene21028:intron | 50.0% | |
| CTGCAGATTTGCGCAAGATC+TGG | + | chr1.4:68928707-68928726 | MS.gene21028:intron | 50.0% | |
| CTGCCCAAACTCCATAATGG+AGG | - | chr1.4:68927926-68927945 | None:intergenic | 50.0% | |
| CTTCCATCTGCTGCTAAGGA+TGG | + | chr1.4:68927478-68927497 | MS.gene21028:CDS | 50.0% | |
| GAGGGAAAAAAGCTCCTACC+AGG | - | chr1.4:68924225-68924244 | None:intergenic | 50.0% | |
| GAGGGGCGGTCAAACAAAAA+GGG | + | chr1.4:68925986-68926005 | MS.gene21028:intron | 50.0% | |
| GAGTCGTGTGAGTAGCAGTT+TGG | + | chr1.4:68924162-68924181 | MS.gene21028:CDS | 50.0% | |
| GCCAAACCGGTTGTGGATAT+GGG | + | chr1.4:68928100-68928119 | MS.gene21028:intron | 50.0% | |
| GCCACTGTCACAAATTGGTC+AGG | + | chr1.4:68925483-68925502 | MS.gene21028:intron | 50.0% | |
| GCCATTGCTGCCTGAATTGA+GGG | - | chr1.4:68926072-68926091 | None:intergenic | 50.0% | |
| GCTTAACCTGTTCCAAGCTG+TGG | - | chr1.4:68926674-68926693 | None:intergenic | 50.0% | |
| GGCCATTGCCCTATTTGCAT+AGG | - | chr1.4:68924579-68924598 | None:intergenic | 50.0% | |
| GTGATCTCCTCCATCAAGAG+TGG | - | chr1.4:68926576-68926595 | None:intergenic | 50.0% | |
| GTGCAGTTCGGTATCAGACA+AGG | - | chr1.4:68928296-68928315 | None:intergenic | 50.0% | |
| GTTCTTTGCAGCTTCAGCCA+TGG | - | chr1.4:68927001-68927020 | None:intergenic | 50.0% | |
| TTATGACCAGGCTTCACGAC+GGG | + | chr1.4:68926123-68926142 | MS.gene21028:intron | 50.0% | |
| TTGGGACACATGTCAGCTCA+TGG | - | chr1.4:68924371-68924390 | None:intergenic | 50.0% | |
| TTGTGCACCAGAGAGAAGTG+AGG | - | chr1.4:68926203-68926222 | None:intergenic | 50.0% | |
| ! | AAATTGGCCTGATAGGTGGG+GGG | + | chr1.4:68928423-68928442 | MS.gene21028:intron | 50.0% |
| ! | AAGGCGCCACTGTCACAAAT+TGG | + | chr1.4:68925478-68925497 | MS.gene21028:intron | 50.0% |
| ! | AGCAGGACTCAAGGACTAGT+AGG | + | chr1.4:68926618-68926637 | MS.gene21028:CDS | 50.0% |
| ! | ATGCACCCACATTTTCCCTG+TGG | + | chr1.4:68927952-68927971 | MS.gene21028:intron | 50.0% |
| ! | CAGTTTGAGGTCTCTTGGAG+AGG | + | chr1.4:68927045-68927064 | MS.gene21028:CDS | 50.0% |
| ! | CCCACCTATCAGGCCAATTT+TGG | - | chr1.4:68928423-68928442 | None:intergenic | 50.0% |
| ! | CCTGAATTGAGGGCATGAGA+CGG | - | chr1.4:68926062-68926081 | None:intergenic | 50.0% |
| ! | CTCTTTTGGCAGCGAAGACA+TGG | + | chr1.4:68927390-68927409 | MS.gene21028:intron | 50.0% |
| ! | CTGAATTGAGGGCATGAGAC+GGG | - | chr1.4:68926061-68926080 | None:intergenic | 50.0% |
| ! | GACCGCCCCTCCAATTTTTA+AGG | - | chr1.4:68925977-68925996 | None:intergenic | 50.0% |
| ! | GCTTCTGAGAAAGACCTGGT+AGG | + | chr1.4:68924208-68924227 | MS.gene21028:intron | 50.0% |
| ! | GGCATGAGCTTTGTAACACC+AGG | - | chr1.4:68925735-68925754 | None:intergenic | 50.0% |
| ! | GGTGTTACAAAGCTCATGCC+AGG | + | chr1.4:68925735-68925754 | MS.gene21028:intron | 50.0% |
| ! | GTCTCTTGGAGAGGGTTTTC+TGG | + | chr1.4:68927054-68927073 | MS.gene21028:CDS | 50.0% |
| ! | TGCTGCTTCTGAGAAAGACC+TGG | + | chr1.4:68924204-68924223 | MS.gene21028:CDS | 50.0% |
| !! | TTGGTCTTGCGTAACAGGGT+GGG | + | chr1.4:68924256-68924275 | MS.gene21028:intron | 50.0% |
| !! | TTTGGTCTTGCGTAACAGGG+TGG | + | chr1.4:68924255-68924274 | MS.gene21028:intron | 50.0% |
| AAGGCCGGACACTATGCATG+AGG | - | chr1.4:68926496-68926515 | None:intergenic | 55.0% | |
| CAGATGCCGAGTTTGCCATG+AGG | + | chr1.4:68925045-68925064 | MS.gene21028:intron | 55.0% | |
| CCGTCTCATGCCCTCAATTC+AGG | + | chr1.4:68926059-68926078 | MS.gene21028:intron | 55.0% | |
| GCCCTCAATTCAGGCAGCAA+TGG | + | chr1.4:68926068-68926087 | MS.gene21028:intron | 55.0% | |
| GCGAGCACGGAAGATTCATG+TGG | - | chr1.4:68928466-68928485 | None:intergenic | 55.0% | |
| GGAGGGGCGGTCAAACAAAA+AGG | + | chr1.4:68925985-68926004 | MS.gene21028:intron | 55.0% | |
| GGCTGAGGATGACTGTACAG+AGG | + | chr1.4:68924833-68924852 | MS.gene21028:CDS | 55.0% | |
| GGTCAGCTGCAATGCATAGG+TGG | + | chr1.4:68927897-68927916 | MS.gene21028:intron | 55.0% | |
| GTGCCTTCCATCTGCTGCTA+AGG | + | chr1.4:68927474-68927493 | MS.gene21028:CDS | 55.0% | |
| TCAAGCTGCTTCTCGAGCCA+TGG | + | chr1.4:68926981-68927000 | MS.gene21028:CDS | 55.0% | |
| TGCAAGCCACAGCTTGGAAC+AGG | + | chr1.4:68926665-68926684 | MS.gene21028:CDS | 55.0% | |
| TGCCGAGTTTGCCATGAGGT+TGG | + | chr1.4:68925049-68925068 | MS.gene21028:CDS | 55.0% | |
| TGTTCCACGTTGAGCGAGCA+CGG | - | chr1.4:68928479-68928498 | None:intergenic | 55.0% | |
| TTGTGACAGTGGCGCCTTGA+CGG | - | chr1.4:68925476-68925495 | None:intergenic | 55.0% | |
| ! | TGGTCTTGCGTAACAGGGTG+GGG | + | chr1.4:68924257-68924276 | MS.gene21028:intron | 55.0% |
| AGCATGCTCTCGGCGAGCAA+CGG | + | chr1.4:68924884-68924903 | MS.gene21028:CDS | 60.0% | |
| AGGCTTCACGACGGGACACT+AGG | + | chr1.4:68926131-68926150 | MS.gene21028:intron | 60.0% | |
| GGCTACAGCAGTGGGTGAGA+AGG | - | chr1.4:68924558-68924577 | None:intergenic | 60.0% | |
| TAGTGTCCCGTCGTGAAGCC+TGG | - | chr1.4:68926132-68926151 | None:intergenic | 60.0% | |
| TCTTCCGTGCTCGCTCAACG+TGG | + | chr1.4:68928472-68928491 | MS.gene21028:intron | 60.0% | |
| ATGAGGGCCCCCCACCTATC+AGG | - | chr1.4:68928433-68928452 | None:intergenic | 65.0% | |
| CTGCGCTGAGGCAACTCCGA+TGG | + | chr1.4:68928741-68928760 | MS.gene21028:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 68924064 | 68928816 | 68924064 | ID=MS.gene21028 |
| chr1.4 | mRNA | 68924064 | 68928816 | 68924064 | ID=MS.gene21028.t1;Parent=MS.gene21028 |
| chr1.4 | exon | 68924064 | 68924225 | 68924064 | ID=MS.gene21028.t1.exon1;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68924064 | 68924225 | 68924064 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68924491 | 68924615 | 68924491 | ID=MS.gene21028.t1.exon2;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68924491 | 68924615 | 68924491 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68924824 | 68924945 | 68924824 | ID=MS.gene21028.t1.exon3;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68924824 | 68924945 | 68924824 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68925048 | 68925130 | 68925048 | ID=MS.gene21028.t1.exon4;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68925048 | 68925130 | 68925048 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68926252 | 68926401 | 68926252 | ID=MS.gene21028.t1.exon5;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68926252 | 68926401 | 68926252 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68926543 | 68926686 | 68926543 | ID=MS.gene21028.t1.exon6;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68926543 | 68926686 | 68926543 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68926928 | 68927107 | 68926928 | ID=MS.gene21028.t1.exon7;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68926928 | 68927107 | 68926928 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68927224 | 68927318 | 68927224 | ID=MS.gene21028.t1.exon8;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68927224 | 68927318 | 68927224 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68927402 | 68927499 | 68927402 | ID=MS.gene21028.t1.exon9;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68927402 | 68927499 | 68927402 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| chr1.4 | exon | 68928713 | 68928816 | 68928713 | ID=MS.gene21028.t1.exon10;Parent=MS.gene21028.t1 |
| chr1.4 | CDS | 68928713 | 68928816 | 68928713 | ID=cds.MS.gene21028.t1;Parent=MS.gene21028.t1 |
| Gene Sequence |
| Protein sequence |
