Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22957.t1 | XP_013450365.1 | 100 | 188 | 0 | 0 | 1 | 188 | 1 | 188 | 7.90E-96 | 359.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22957.t1 | Q940B0 | 84.6 | 188 | 28 | 1 | 1 | 188 | 1 | 187 | 1.9e-82 | 306.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22957.t1 | A0A072U5K2 | 100.0 | 188 | 0 | 0 | 1 | 188 | 1 | 188 | 5.7e-96 | 359.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene22957 | 0.813555 | 2.41E-51 | -1.69E-46 |
| MS.gene053224 | MS.gene22957 | 0.815435 | 9.26E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025709 | MS.gene22957 | PPI |
| MS.gene22957 | MS.gene26792 | PPI |
| MS.gene40831 | MS.gene22957 | PPI |
| MS.gene22957 | MS.gene23126 | PPI |
| MS.gene22957 | MS.gene06999 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22957.t1 | MTR_7g108805 | 100.000 | 188 | 0 | 0 | 1 | 188 | 1 | 188 | 2.08e-134 | 374 |
| MS.gene22957.t1 | MTR_1g083460 | 91.489 | 188 | 15 | 1 | 1 | 188 | 1 | 187 | 1.02e-121 | 342 |
| MS.gene22957.t1 | MTR_7g112880 | 86.702 | 188 | 24 | 1 | 1 | 188 | 1 | 187 | 8.53e-117 | 329 |
| MS.gene22957.t1 | MTR_7g112880 | 84.444 | 135 | 20 | 1 | 54 | 188 | 1 | 134 | 1.17e-79 | 233 |
| MS.gene22957.t1 | MTR_4g005170 | 83.929 | 56 | 8 | 1 | 133 | 188 | 582 | 636 | 8.87e-24 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22957.t1 | AT5G27850 | 84.574 | 188 | 28 | 1 | 1 | 188 | 1 | 187 | 2.25e-113 | 320 |
| MS.gene22957.t1 | AT3G05590 | 83.511 | 188 | 30 | 1 | 1 | 188 | 1 | 187 | 3.60e-111 | 315 |
| MS.gene22957.t1 | AT2G47570 | 77.540 | 187 | 40 | 2 | 3 | 188 | 1 | 186 | 9.40e-101 | 288 |
| MS.gene22957.t1 | AT5G27850 | 82.963 | 135 | 22 | 1 | 54 | 188 | 1 | 134 | 1.19e-77 | 228 |
| MS.gene22957.t1 | AT3G05590 | 82.222 | 135 | 23 | 1 | 54 | 188 | 1 | 134 | 4.63e-77 | 227 |
| MS.gene22957.t1 | AT3G05590 | 82.222 | 135 | 23 | 1 | 54 | 188 | 1 | 134 | 4.63e-77 | 227 |
Find 54 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGGTACGTTTAGTCTTCT+TGG | 0.192478 | 7.3:+6056858 | None:intergenic |
| TTATGAAGTACCTGCAATTA+AGG | 0.289178 | 7.3:-6056076 | MS.gene22957:CDS |
| CTGGCTCTTAGAGCTCCTTT+AGG | 0.297513 | 7.3:-6055976 | MS.gene22957:CDS |
| AGGTAGATATCATTGGATTT+TGG | 0.303386 | 7.3:+6056835 | None:intergenic |
| AGCCACCACTATCACTTTCT+AGG | 0.308293 | 7.3:-6056615 | MS.gene22957:CDS |
| TGGCTCTTAGAGCTCCTTTA+GGG | 0.321716 | 7.3:-6055975 | MS.gene22957:CDS |
| GTGCCGTGACAGATGACATT+AGG | 0.331949 | 7.3:-6056101 | MS.gene22957:CDS |
| ATGTTTCAGGTTCTTCTTAG+AGG | 0.334993 | 7.3:-6055306 | MS.gene22957:intron |
| GACTGAAAGTAATTTCAATA+AGG | 0.349360 | 7.3:-6056674 | MS.gene22957:CDS |
| AGAGCAGTTACCTTAATTGC+AGG | 0.362185 | 7.3:+6056066 | None:intergenic |
| TCAATAAGGTTATCCTTAAG+AGG | 0.371127 | 7.3:-6056660 | MS.gene22957:CDS |
| TGCTCATGAAAAGCCTCTTA+AGG | 0.380870 | 7.3:+6056647 | None:intergenic |
| TTGAAGCCGCTAGAGGAAAA+AGG | 0.383923 | 7.3:-6055182 | MS.gene22957:CDS |
| CTACCTCAAGCTTCTCGTTA+AGG | 0.389550 | 7.3:-6056818 | MS.gene22957:intron |
| TGCCGTGACAGATGACATTA+GGG | 0.403697 | 7.3:-6056100 | MS.gene22957:CDS |
| CAATTAAGGTAACTGCTCTA+AGG | 0.406837 | 7.3:-6056062 | MS.gene22957:CDS |
| AAGCTTGAGGTAGATATCAT+TGG | 0.411467 | 7.3:+6056828 | None:intergenic |
| GTGCCTCACCTTTGATCAGC+TGG | 0.415929 | 7.3:-6055995 | MS.gene22957:CDS |
| TTCGTAGGGTATCGATTTGA+AGG | 0.462013 | 7.3:-6056893 | MS.gene22957:intron |
| TGCTCTAAGGTTCACCGAAA+AGG | 0.469427 | 7.3:-6056049 | MS.gene22957:CDS |
| GGTAAGATTGCTGTAGTTGT+TGG | 0.475236 | 7.3:-6056123 | MS.gene22957:CDS |
| AAGCACTTTGGACGAGCTCC+TGG | 0.482073 | 7.3:-6055258 | MS.gene22957:CDS |
| CGTGAGGCTGTCAAGCACTT+TGG | 0.482505 | 7.3:-6055270 | MS.gene22957:CDS |
| TAAGGTTCACCGAAAAGGCC+AGG | 0.486544 | 7.3:-6056044 | MS.gene22957:CDS |
| CATACCGTGTTCTGCCCTAA+AGG | 0.491830 | 7.3:+6055961 | None:intergenic |
| TAGGGTATCGATTTGAAGGC+AGG | 0.495891 | 7.3:-6056889 | MS.gene22957:CDS |
| AGCCTTCTCAATTCTAGCCC+TGG | 0.500353 | 7.3:+6056026 | None:intergenic |
| GCGATTATATACCTTTCCCT+TGG | 0.506650 | 7.3:+6056579 | None:intergenic |
| GTGTTGCTGTGTGGCACACC+AGG | 0.524962 | 7.3:+6055240 | None:intergenic |
| CAGTCCTTCGAACAAGGAAA+CGG | 0.531384 | 7.3:+6056692 | None:intergenic |
| TACTTTCAGTCCTTCGAACA+AGG | 0.547564 | 7.3:+6056686 | None:intergenic |
| ATCAACCTAGAAAGTGATAG+TGG | 0.548653 | 7.3:+6056610 | None:intergenic |
| CTAGAATTGAGAAGGCTGGT+GGG | 0.553032 | 7.3:-6056020 | MS.gene22957:CDS |
| AGGTTGATTCGTTACACCAA+GGG | 0.558600 | 7.3:-6056595 | MS.gene22957:CDS |
| AAAGTGCTTGACAGCCTCAC+GGG | 0.558822 | 7.3:+6055272 | None:intergenic |
| GATTCGTTACACCAAGGGAA+AGG | 0.565427 | 7.3:-6056590 | MS.gene22957:intron |
| TATACCGTTTCCTTGTTCGA+AGG | 0.566828 | 7.3:-6056696 | MS.gene22957:CDS |
| AGGGCTAGAATTGAGAAGGC+TGG | 0.575107 | 7.3:-6056024 | MS.gene22957:CDS |
| CAAAGTGCTTGACAGCCTCA+CGG | 0.580659 | 7.3:+6055271 | None:intergenic |
| CGAAAGGTTGAAGCCGCTAG+AGG | 0.583684 | 7.3:-6055189 | MS.gene22957:CDS |
| GCTAGAATTGAGAAGGCTGG+TGG | 0.586828 | 7.3:-6056021 | MS.gene22957:CDS |
| TCTAAGAGCCAGCTGATCAA+AGG | 0.589919 | 7.3:+6055987 | None:intergenic |
| TAGAATTGAGAAGGCTGGTG+GGG | 0.601753 | 7.3:-6056019 | MS.gene22957:CDS |
| AACCCTAATGTCATCTGTCA+CGG | 0.612086 | 7.3:+6056098 | None:intergenic |
| GGCCAGGGCTAGAATTGAGA+AGG | 0.617622 | 7.3:-6056028 | MS.gene22957:CDS |
| AGCTCCTTTAGGGCAGAACA+CGG | 0.621376 | 7.3:-6055965 | MS.gene22957:intron |
| AACACTAAGCCCTATGTCCG+TGG | 0.624133 | 7.3:-6055222 | MS.gene22957:CDS |
| AAGGTTCACCGAAAAGGCCA+GGG | 0.631182 | 7.3:-6056043 | MS.gene22957:CDS |
| ATACCTTAACGAGAAGCTTG+AGG | 0.643723 | 7.3:+6056815 | None:intergenic |
| TAGGTTGATTCGTTACACCA+AGG | 0.646840 | 7.3:-6056596 | MS.gene22957:CDS |
| AACCTAGAAAGTGATAGTGG+TGG | 0.668105 | 7.3:+6056613 | None:intergenic |
| GAGCCAGCTGATCAAAGGTG+AGG | 0.684975 | 7.3:+6055992 | None:intergenic |
| GGTATCGATTTGAAGGCAGG+AGG | 0.706809 | 7.3:-6056886 | MS.gene22957:CDS |
| TAGGGCTTAGTGTTGCTGTG+TGG | 0.709531 | 7.3:+6055231 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGTTGTATTTATAACAA+AGG | - | chr7.3:6055619-6055638 | MS.gene22957:intron | 15.0% |
| !!! | TGGTAAACATATTATTTTAT+AGG | + | chr7.3:6056575-6056594 | None:intergenic | 15.0% |
| !!! | TGTTATAAACTTTTAATCTT+TGG | + | chr7.3:6056311-6056330 | None:intergenic | 15.0% |
| !!! | TTTACTTTGTTTTGAAATAT+TGG | - | chr7.3:6056487-6056506 | MS.gene22957:intron | 15.0% |
| !! | AAAAAAAAAAGCCTATAACA+TGG | + | chr7.3:6055847-6055866 | None:intergenic | 20.0% |
| !! | AAAAAAAAAGCCTATAACAT+GGG | + | chr7.3:6055846-6055865 | None:intergenic | 20.0% |
| !! | AATGAATAGAATGATAAATG+TGG | - | chr7.3:6056445-6056464 | MS.gene22957:intron | 20.0% |
| !! | ATAAAAAAGGCAACAAAAAT+AGG | + | chr7.3:6056716-6056735 | None:intergenic | 20.0% |
| !! | TACTAAAGCAAAATAAAAAC+AGG | + | chr7.3:6056614-6056633 | None:intergenic | 20.0% |
| !! | TCCTAAAGATGTAATAAAAA+AGG | + | chr7.3:6056729-6056748 | None:intergenic | 20.0% |
| !!! | TATTATTTTATAGGCTGTAT+TGG | + | chr7.3:6056566-6056585 | None:intergenic | 20.0% |
| !!! | TTTTCTTGTATTAATGTTTC+AGG | - | chr7.3:6056823-6056842 | MS.gene22957:CDS | 20.0% |
| ! | ACAAAGTAAAACAAAAACAC+AGG | + | chr7.3:6056477-6056496 | None:intergenic | 25.0% |
| ! | GACTGAAAGTAATTTCAATA+AGG | - | chr7.3:6055468-6055487 | MS.gene22957:intron | 25.0% |
| ! | GTTATTGTGAATCTGAATAA+TGG | - | chr7.3:6055373-6055392 | MS.gene22957:intron | 25.0% |
| !! | CAGAAAGTATAACAGTTATA+AGG | + | chr7.3:6056541-6056560 | None:intergenic | 25.0% |
| !! | TTATTACATCTTTAGGAGAA+AGG | - | chr7.3:6056732-6056751 | MS.gene22957:intron | 25.0% |
| !!! | AATTTTAGAAGTTTGGAAGT+TGG | - | chr7.3:6056270-6056289 | MS.gene22957:intron | 25.0% |
| !!! | GCCTTTTTTATTACATCTTT+AGG | - | chr7.3:6056725-6056744 | MS.gene22957:intron | 25.0% |
| !!! | TCACTTTTTTTCTTTCTTTC+TGG | - | chr7.3:6055987-6056006 | MS.gene22957:CDS | 25.0% |
| !!! | TTGCTGTAATTTTAGAAGTT+TGG | - | chr7.3:6056263-6056282 | MS.gene22957:intron | 25.0% |
| !!! | TTTTCTTTCTTTCTGGTATT+AGG | - | chr7.3:6055994-6056013 | MS.gene22957:CDS | 25.0% |
| AAAACATGACTTCATACAAG+TGG | + | chr7.3:6056381-6056400 | None:intergenic | 30.0% | |
| ATTAAGACAACATACATCTG+AGG | - | chr7.3:6056791-6056810 | MS.gene22957:intron | 30.0% | |
| CAAGAGTAGAAAATGAATGA+AGG | + | chr7.3:6055354-6055373 | None:intergenic | 30.0% | |
| CAATTGCATGAAGTTTAGTT+TGG | + | chr7.3:6056344-6056363 | None:intergenic | 30.0% | |
| GAATAGAATGATAAATGTGG+AGG | - | chr7.3:6056448-6056467 | MS.gene22957:intron | 30.0% | |
| TCAAATAAGCGAATCAAAAC+AGG | - | chr7.3:6055820-6055839 | MS.gene22957:intron | 30.0% | |
| TCAATAAGGTTATCCTTAAG+AGG | - | chr7.3:6055482-6055501 | MS.gene22957:intron | 30.0% | |
| TCGGAGTTAGTTATAAGAAA+TGG | + | chr7.3:6055198-6055217 | None:intergenic | 30.0% | |
| ! | AGGTAGATATCATTGGATTT+TGG | + | chr7.3:6055310-6055329 | None:intergenic | 30.0% |
| ! | TGCATGTATGCTTTTAGATA+CGG | - | chr7.3:6055900-6055919 | MS.gene22957:intron | 30.0% |
| ! | TTATGAAGTACCTGCAATTA+AGG | - | chr7.3:6056066-6056085 | MS.gene22957:CDS | 30.0% |
| !! | GCTTTTAGATACGGTTTTAT+TGG | - | chr7.3:6055909-6055928 | MS.gene22957:intron | 30.0% |
| !! | TTGTCTTAATTTGCAAAGAG+TGG | + | chr7.3:6056781-6056800 | None:intergenic | 30.0% |
| AAGCTTGAGGTAGATATCAT+TGG | + | chr7.3:6055317-6055336 | None:intergenic | 35.0% | |
| ATCAACCTAGAAAGTGATAG+TGG | + | chr7.3:6055535-6055554 | None:intergenic | 35.0% | |
| CAATTAAGGTAACTGCTCTA+AGG | - | chr7.3:6056080-6056099 | MS.gene22957:CDS | 35.0% | |
| ! | ACTTTTATACCTATCTGCTG+CGG | - | chr7.3:6056652-6056671 | MS.gene22957:CDS | 35.0% |
| ! | ATAAGTATCGTACGAGTGTT+TGG | + | chr7.3:6055786-6055805 | None:intergenic | 35.0% |
| ! | CTTTCTTTCTGGTATTAGGA+GGG | - | chr7.3:6055998-6056017 | MS.gene22957:CDS | 35.0% |
| ! | GCGGCAAATTAGATCAATTT+TGG | - | chr7.3:6056671-6056690 | MS.gene22957:CDS | 35.0% |
| ! | TCTTTCTTTCTGGTATTAGG+AGG | - | chr7.3:6055997-6056016 | MS.gene22957:CDS | 35.0% |
| ! | TTGGATAATGCTGTTACTTG+CGG | - | chr7.3:6056506-6056525 | MS.gene22957:intron | 35.0% |
| !! | ATGTTTCAGGTTCTTCTTAG+AGG | - | chr7.3:6056836-6056855 | MS.gene22957:CDS | 35.0% |
| !! | GATATCATTGGATTTTGGTG+CGG | + | chr7.3:6055305-6055324 | None:intergenic | 35.0% |
| !! | GGTTGATGAAGAGATAACAT+TGG | - | chr7.3:6055930-6055949 | MS.gene22957:intron | 35.0% |
| !!! | CCTTTCGTGATTTTTTTCCA+CGG | + | chr7.3:6056940-6056959 | None:intergenic | 35.0% |
| !!! | GATTTTTTTCCACGGACATA+GGG | + | chr7.3:6056932-6056951 | None:intergenic | 35.0% |
| !!! | TGATTTTTTTCCACGGACAT+AGG | + | chr7.3:6056933-6056952 | None:intergenic | 35.0% |
| AACCCTAATGTCATCTGTCA+CGG | + | chr7.3:6056047-6056066 | None:intergenic | 40.0% | |
| AGAGCAGTTACCTTAATTGC+AGG | + | chr7.3:6056079-6056098 | None:intergenic | 40.0% | |
| ATACCTTAACGAGAAGCTTG+AGG | + | chr7.3:6055330-6055349 | None:intergenic | 40.0% | |
| CCGTGGAAAAAAATCACGAA+AGG | - | chr7.3:6056937-6056956 | MS.gene22957:intron | 40.0% | |
| GCGATTATATACCTTTCCCT+TGG | + | chr7.3:6055566-6055585 | None:intergenic | 40.0% | |
| GGTAAGATTGCTGTAGTTGT+TGG | - | chr7.3:6056019-6056038 | MS.gene22957:CDS | 40.0% | |
| TACTTTCAGTCCTTCGAACA+AGG | + | chr7.3:6055459-6055478 | None:intergenic | 40.0% | |
| TATACCGTTTCCTTGTTCGA+AGG | - | chr7.3:6055446-6055465 | MS.gene22957:intron | 40.0% | |
| TCAAAACAGGCCCATGTTAT+AGG | - | chr7.3:6055833-6055852 | MS.gene22957:intron | 40.0% | |
| TGCTCATGAAAAGCCTCTTA+AGG | + | chr7.3:6055498-6055517 | None:intergenic | 40.0% | |
| ! | CAGGAAGTACACTAGATTTG+TGG | + | chr7.3:6056595-6056614 | None:intergenic | 40.0% |
| ! | CCTCTTTCTCTCTTTTCGTA+GGG | - | chr7.3:6055235-6055254 | MS.gene22957:CDS | 40.0% |
| ! | TCCTCTTTCTCTCTTTTCGT+AGG | - | chr7.3:6055234-6055253 | MS.gene22957:CDS | 40.0% |
| !! | AACCTAGAAAGTGATAGTGG+TGG | + | chr7.3:6055532-6055551 | None:intergenic | 40.0% |
| !! | AGGTTGATTCGTTACACCAA+GGG | - | chr7.3:6055547-6055566 | MS.gene22957:intron | 40.0% |
| !! | TAGGTTGATTCGTTACACCA+AGG | - | chr7.3:6055546-6055565 | MS.gene22957:intron | 40.0% |
| !! | TTCGTAGGGTATCGATTTGA+AGG | - | chr7.3:6055249-6055268 | MS.gene22957:CDS | 40.0% |
| AGAAAGAGGAGTGAGATGAG+AGG | + | chr7.3:6055224-6055243 | None:intergenic | 45.0% | |
| AGAGGAAAAAGGAAGAGCAG+AGG | - | chr7.3:6056971-6056990 | MS.gene22957:intron | 45.0% | |
| AGCCACCACTATCACTTTCT+AGG | - | chr7.3:6055527-6055546 | MS.gene22957:intron | 45.0% | |
| CAGTCCTTCGAACAAGGAAA+CGG | + | chr7.3:6055453-6055472 | None:intergenic | 45.0% | |
| CCCTACGAAAAGAGAGAAAG+AGG | + | chr7.3:6055238-6055257 | None:intergenic | 45.0% | |
| CTACCTCAAGCTTCTCGTTA+AGG | - | chr7.3:6055324-6055343 | MS.gene22957:intron | 45.0% | |
| CTAGAATTGAGAAGGCTGGT+GGG | - | chr7.3:6056122-6056141 | MS.gene22957:CDS | 45.0% | |
| GATTCGTTACACCAAGGGAA+AGG | - | chr7.3:6055552-6055571 | MS.gene22957:intron | 45.0% | |
| TAGAATTGAGAAGGCTGGTG+GGG | - | chr7.3:6056123-6056142 | MS.gene22957:CDS | 45.0% | |
| TCCTCCTCTACAATCTCCAT+CGG | - | chr7.3:6055167-6055186 | MS.gene22957:CDS | 45.0% | |
| TCTAAGAGCCAGCTGATCAA+AGG | + | chr7.3:6056158-6056177 | None:intergenic | 45.0% | |
| TGCCGTGACAGATGACATTA+GGG | - | chr7.3:6056042-6056061 | MS.gene22957:CDS | 45.0% | |
| TGGCTCTTAGAGCTCCTTTA+GGG | - | chr7.3:6056167-6056186 | MS.gene22957:intron | 45.0% | |
| TTGAAGCCGCTAGAGGAAAA+AGG | - | chr7.3:6056960-6056979 | MS.gene22957:intron | 45.0% | |
| ! | GCTCTTCCTTTTTCCTCTAG+CGG | + | chr7.3:6056969-6056988 | None:intergenic | 45.0% |
| ! | TCTAATTTGCCGCAGCAGAT+AGG | + | chr7.3:6056664-6056683 | None:intergenic | 45.0% |
| ! | TGCGGTACGTTTAGTCTTCT+TGG | + | chr7.3:6055287-6055306 | None:intergenic | 45.0% |
| !! | AATTCTAGCCCTGGCCTTTT+CGG | + | chr7.3:6056110-6056129 | None:intergenic | 45.0% |
| !! | TAGGGTATCGATTTGAAGGC+AGG | - | chr7.3:6055253-6055272 | MS.gene22957:CDS | 45.0% |
| !! | TGCTCTAAGGTTCACCGAAA+AGG | - | chr7.3:6056093-6056112 | MS.gene22957:CDS | 45.0% |
| AACACTAAGCCCTATGTCCG+TGG | - | chr7.3:6056920-6056939 | MS.gene22957:intron | 50.0% | |
| AAGGTTCACCGAAAAGGCCA+GGG | - | chr7.3:6056099-6056118 | MS.gene22957:CDS | 50.0% | |
| AGCCTTCTCAATTCTAGCCC+TGG | + | chr7.3:6056119-6056138 | None:intergenic | 50.0% | |
| AGGGCTAGAATTGAGAAGGC+TGG | - | chr7.3:6056118-6056137 | MS.gene22957:CDS | 50.0% | |
| ATAAGAAATGGTCGCGCCGA+TGG | + | chr7.3:6055186-6055205 | None:intergenic | 50.0% | |
| CATACCGTGTTCTGCCCTAA+AGG | + | chr7.3:6056184-6056203 | None:intergenic | 50.0% | |
| GCTAGAATTGAGAAGGCTGG+TGG | - | chr7.3:6056121-6056140 | MS.gene22957:CDS | 50.0% | |
| GGAGTGAGATGAGAGGTTGT+CGG | + | chr7.3:6055217-6055236 | None:intergenic | 50.0% | |
| GTGCCGTGACAGATGACATT+AGG | - | chr7.3:6056041-6056060 | MS.gene22957:CDS | 50.0% | |
| TAAGGTTCACCGAAAAGGCC+AGG | - | chr7.3:6056098-6056117 | MS.gene22957:CDS | 50.0% | |
| ! | AAAGTGCTTGACAGCCTCAC+GGG | + | chr7.3:6056873-6056892 | None:intergenic | 50.0% |
| ! | ACAGCCTCACGGGCATTTTT+GGG | + | chr7.3:6056863-6056882 | None:intergenic | 50.0% |
| ! | CAAAGTGCTTGACAGCCTCA+CGG | + | chr7.3:6056874-6056893 | None:intergenic | 50.0% |
| ! | CTGGCTCTTAGAGCTCCTTT+AGG | - | chr7.3:6056166-6056185 | MS.gene22957:intron | 50.0% |
| ! | TAGGGCTTAGTGTTGCTGTG+TGG | + | chr7.3:6056914-6056933 | None:intergenic | 50.0% |
| !! | AGCTCCTTTAGGGCAGAACA+CGG | - | chr7.3:6056177-6056196 | MS.gene22957:intron | 50.0% |
| !! | GGTATCGATTTGAAGGCAGG+AGG | - | chr7.3:6055256-6055275 | MS.gene22957:CDS | 50.0% |
| AAGCACTTTGGACGAGCTCC+TGG | - | chr7.3:6056884-6056903 | MS.gene22957:CDS | 55.0% | |
| AGGTCCCAAAAATGCCCGTG+AGG | - | chr7.3:6056856-6056875 | MS.gene22957:CDS | 55.0% | |
| CGAAAGGTTGAAGCCGCTAG+AGG | - | chr7.3:6056953-6056972 | MS.gene22957:intron | 55.0% | |
| CGTGAGGCTGTCAAGCACTT+TGG | - | chr7.3:6056872-6056891 | MS.gene22957:CDS | 55.0% | |
| GAGCCAGCTGATCAAAGGTG+AGG | + | chr7.3:6056153-6056172 | None:intergenic | 55.0% | |
| GCCGATGGAGATTGTAGAGG+AGG | + | chr7.3:6055171-6055190 | None:intergenic | 55.0% | |
| GGCCAGGGCTAGAATTGAGA+AGG | - | chr7.3:6056114-6056133 | MS.gene22957:CDS | 55.0% | |
| GTGCCTCACCTTTGATCAGC+TGG | - | chr7.3:6056147-6056166 | MS.gene22957:intron | 55.0% | |
| ! | GACAGCCTCACGGGCATTTT+TGG | + | chr7.3:6056864-6056883 | None:intergenic | 55.0% |
| ! | CGCGCCGATGGAGATTGTAG+AGG | + | chr7.3:6055174-6055193 | None:intergenic | 60.0% |
| ! | GTGTTGCTGTGTGGCACACC+AGG | + | chr7.3:6056905-6056924 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6055158 | 6057006 | 6055158 | ID=MS.gene22957 |
| chr7.3 | mRNA | 6055158 | 6057006 | 6055158 | ID=MS.gene22957.t1;Parent=MS.gene22957 |
| chr7.3 | exon | 6057004 | 6057006 | 6057004 | ID=MS.gene22957.t1.exon1;Parent=MS.gene22957.t1 |
| chr7.3 | CDS | 6057004 | 6057006 | 6057004 | ID=cds.MS.gene22957.t1;Parent=MS.gene22957.t1 |
| chr7.3 | exon | 6056819 | 6056908 | 6056819 | ID=MS.gene22957.t1.exon2;Parent=MS.gene22957.t1 |
| chr7.3 | CDS | 6056819 | 6056908 | 6056819 | ID=cds.MS.gene22957.t1;Parent=MS.gene22957.t1 |
| chr7.3 | exon | 6056591 | 6056719 | 6056591 | ID=MS.gene22957.t1.exon3;Parent=MS.gene22957.t1 |
| chr7.3 | CDS | 6056591 | 6056719 | 6056591 | ID=cds.MS.gene22957.t1;Parent=MS.gene22957.t1 |
| chr7.3 | exon | 6055966 | 6056148 | 6055966 | ID=MS.gene22957.t1.exon4;Parent=MS.gene22957.t1 |
| chr7.3 | CDS | 6055966 | 6056148 | 6055966 | ID=cds.MS.gene22957.t1;Parent=MS.gene22957.t1 |
| chr7.3 | exon | 6055158 | 6055319 | 6055158 | ID=MS.gene22957.t1.exon5;Parent=MS.gene22957.t1 |
| chr7.3 | CDS | 6055158 | 6055319 | 6055158 | ID=cds.MS.gene22957.t1;Parent=MS.gene22957.t1 |
| Gene Sequence |
| Protein sequence |
