Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24414.t1 | XP_003589183.2 | 94 | 384 | 10 | 1 | 1 | 371 | 82 | 465 | 2.90E-209 | 737.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24414.t1 | A9QNE7 | 68.5 | 387 | 104 | 5 | 1 | 372 | 87 | 470 | 1.2e-147 | 524.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24414.t1 | G7I3J9 | 94.0 | 384 | 10 | 1 | 1 | 371 | 82 | 465 | 2.1e-209 | 737.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051360 | MS.gene24414 | 0.806153 | 9.45E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene24414 | 0.815996 | 6.94E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene24414 | -0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene24414 | 0.841124 | 5.75E-58 | -1.69E-46 |
| MS.gene052135 | MS.gene24414 | 0.837387 | 5.36E-57 | -1.69E-46 |
| MS.gene052136 | MS.gene24414 | 0.808374 | 3.20E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene24414 | 0.806409 | 8.34E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene24414 | 0.81183 | 5.75E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene24414 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene24414 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene24414 | 0.800627 | 1.32E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24414.t1 | MTR_1g019410 | 94.010 | 384 | 10 | 1 | 1 | 371 | 82 | 465 | 0.0 | 742 |
| MS.gene24414.t1 | MTR_4g086130 | 63.731 | 386 | 124 | 3 | 1 | 372 | 82 | 465 | 0.0 | 515 |
| MS.gene24414.t1 | MTR_4g086040 | 63.307 | 387 | 125 | 4 | 1 | 372 | 85 | 469 | 2.62e-178 | 504 |
| MS.gene24414.t1 | MTR_8g072260 | 55.325 | 385 | 147 | 6 | 1 | 369 | 84 | 459 | 1.69e-150 | 434 |
| MS.gene24414.t1 | MTR_5g025610 | 53.506 | 385 | 154 | 6 | 1 | 369 | 82 | 457 | 1.84e-143 | 416 |
| MS.gene24414.t1 | MTR_8g072260 | 54.545 | 363 | 140 | 6 | 1 | 347 | 84 | 437 | 3.61e-139 | 404 |
| MS.gene24414.t1 | MTR_5g025610 | 52.893 | 363 | 146 | 6 | 1 | 347 | 82 | 435 | 4.42e-133 | 389 |
| MS.gene24414.t1 | MTR_1g037580 | 49.100 | 389 | 181 | 4 | 1 | 375 | 91 | 476 | 2.22e-121 | 360 |
| MS.gene24414.t1 | MTR_8g072260 | 51.703 | 323 | 131 | 6 | 1 | 307 | 84 | 397 | 5.63e-111 | 333 |
| MS.gene24414.t1 | MTR_5g025610 | 49.849 | 331 | 141 | 6 | 1 | 315 | 82 | 403 | 1.05e-106 | 320 |
| MS.gene24414.t1 | MTR_6g034940 | 31.026 | 390 | 244 | 6 | 2 | 370 | 91 | 476 | 2.43e-66 | 218 |
| MS.gene24414.t1 | MTR_2g031930 | 31.026 | 390 | 247 | 7 | 1 | 371 | 98 | 484 | 6.80e-64 | 212 |
| MS.gene24414.t1 | MTR_2g031930 | 31.233 | 365 | 229 | 7 | 1 | 346 | 94 | 455 | 3.70e-59 | 199 |
| MS.gene24414.t1 | MTR_2g031920 | 30.867 | 392 | 248 | 8 | 1 | 371 | 94 | 483 | 7.25e-59 | 199 |
| MS.gene24414.t1 | MTR_8g089800 | 30.946 | 391 | 249 | 6 | 1 | 371 | 96 | 485 | 1.82e-57 | 195 |
| MS.gene24414.t1 | MTR_8g077810 | 32.412 | 398 | 233 | 9 | 3 | 371 | 86 | 476 | 2.08e-57 | 195 |
| MS.gene24414.t1 | MTR_5g082520 | 30.556 | 360 | 229 | 7 | 3 | 345 | 81 | 436 | 3.47e-57 | 194 |
| MS.gene24414.t1 | MTR_6g015910 | 28.831 | 385 | 255 | 7 | 4 | 373 | 82 | 462 | 1.80e-56 | 192 |
| MS.gene24414.t1 | MTR_7g033040 | 33.056 | 360 | 216 | 8 | 6 | 346 | 89 | 442 | 2.10e-56 | 192 |
| MS.gene24414.t1 | MTR_3g007320 | 28.906 | 384 | 254 | 7 | 5 | 373 | 83 | 462 | 8.53e-56 | 190 |
| MS.gene24414.t1 | MTR_3g070380 | 31.025 | 361 | 226 | 7 | 3 | 344 | 82 | 438 | 1.40e-55 | 190 |
| MS.gene24414.t1 | MTR_8g016180 | 30.556 | 360 | 230 | 7 | 3 | 346 | 90 | 445 | 9.37e-54 | 185 |
| MS.gene24414.t1 | MTR_8g100135 | 29.843 | 382 | 251 | 3 | 7 | 371 | 92 | 473 | 6.67e-53 | 183 |
| MS.gene24414.t1 | MTR_8g076940 | 31.742 | 356 | 227 | 4 | 4 | 345 | 101 | 454 | 7.01e-53 | 183 |
| MS.gene24414.t1 | MTR_5g092150 | 30.809 | 383 | 240 | 6 | 7 | 368 | 86 | 464 | 8.87e-53 | 182 |
| MS.gene24414.t1 | MTR_0045s0060 | 28.238 | 386 | 259 | 7 | 1 | 373 | 13 | 393 | 3.37e-52 | 179 |
| MS.gene24414.t1 | MTR_3g112120 | 30.928 | 388 | 249 | 5 | 2 | 371 | 94 | 480 | 5.34e-52 | 181 |
| MS.gene24414.t1 | MTR_5g091760 | 30.691 | 391 | 244 | 7 | 1 | 371 | 90 | 473 | 7.75e-52 | 180 |
| MS.gene24414.t1 | MTR_7g016040 | 28.646 | 384 | 252 | 8 | 4 | 371 | 82 | 459 | 1.14e-51 | 179 |
| MS.gene24414.t1 | MTR_0045s0060 | 28.238 | 386 | 259 | 7 | 1 | 373 | 95 | 475 | 5.02e-51 | 178 |
| MS.gene24414.t1 | MTR_0045s0070 | 29.534 | 386 | 254 | 6 | 1 | 373 | 95 | 475 | 7.94e-51 | 177 |
| MS.gene24414.t1 | MTR_3g467140 | 29.688 | 384 | 251 | 4 | 6 | 370 | 89 | 472 | 5.40e-50 | 175 |
| MS.gene24414.t1 | MTR_5g014250 | 31.472 | 394 | 242 | 8 | 1 | 371 | 98 | 486 | 7.96e-50 | 175 |
| MS.gene24414.t1 | MTR_5g020020 | 31.070 | 383 | 243 | 6 | 9 | 371 | 95 | 476 | 8.87e-50 | 174 |
| MS.gene24414.t1 | MTR_3g467130 | 29.091 | 385 | 254 | 4 | 6 | 371 | 89 | 473 | 9.78e-50 | 174 |
| MS.gene24414.t1 | MTR_3g467140 | 34.507 | 284 | 179 | 3 | 94 | 370 | 56 | 339 | 5.81e-48 | 166 |
| MS.gene24414.t1 | MTR_0045s0070 | 30.084 | 359 | 233 | 6 | 1 | 346 | 95 | 448 | 2.84e-46 | 164 |
| MS.gene24414.t1 | MTR_4g005230 | 35.385 | 260 | 162 | 4 | 117 | 371 | 222 | 480 | 5.57e-46 | 164 |
| MS.gene24414.t1 | MTR_8g012970 | 30.585 | 376 | 230 | 9 | 19 | 371 | 115 | 482 | 7.01e-46 | 164 |
| MS.gene24414.t1 | MTR_5g014240 | 30.256 | 390 | 252 | 6 | 1 | 371 | 97 | 485 | 1.68e-44 | 160 |
| MS.gene24414.t1 | MTR_5g021220 | 30.184 | 381 | 226 | 9 | 3 | 348 | 89 | 464 | 2.49e-44 | 160 |
| MS.gene24414.t1 | MTR_5g020020 | 33.813 | 278 | 177 | 3 | 100 | 371 | 126 | 402 | 1.08e-43 | 157 |
| MS.gene24414.t1 | MTR_5g010750 | 27.701 | 361 | 242 | 8 | 3 | 346 | 84 | 442 | 2.44e-43 | 156 |
| MS.gene24414.t1 | MTR_5g010750 | 27.222 | 360 | 245 | 7 | 3 | 346 | 84 | 442 | 7.28e-43 | 156 |
| MS.gene24414.t1 | MTR_8g016180 | 28.746 | 327 | 214 | 6 | 3 | 314 | 90 | 412 | 7.75e-43 | 154 |
| MS.gene24414.t1 | MTR_8g076940 | 31.003 | 329 | 209 | 5 | 4 | 316 | 101 | 427 | 1.94e-42 | 154 |
| MS.gene24414.t1 | MTR_8g076510 | 27.978 | 361 | 242 | 6 | 3 | 346 | 92 | 451 | 1.99e-42 | 155 |
| MS.gene24414.t1 | MTR_8g089190 | 32.453 | 265 | 175 | 2 | 111 | 371 | 176 | 440 | 4.96e-42 | 153 |
| MS.gene24414.t1 | MTR_1g032950 | 26.943 | 386 | 248 | 7 | 1 | 367 | 96 | 466 | 1.95e-41 | 152 |
| MS.gene24414.t1 | MTR_0045s0080 | 30.032 | 313 | 209 | 6 | 1 | 307 | 95 | 403 | 8.25e-39 | 144 |
| MS.gene24414.t1 | MTR_6g069000 | 28.065 | 367 | 234 | 8 | 3 | 346 | 93 | 452 | 2.29e-38 | 143 |
| MS.gene24414.t1 | MTR_6g069000 | 28.065 | 367 | 234 | 8 | 3 | 346 | 103 | 462 | 3.55e-38 | 143 |
| MS.gene24414.t1 | MTR_7g016040 | 26.950 | 282 | 187 | 6 | 4 | 271 | 82 | 358 | 6.29e-31 | 121 |
| MS.gene24414.t1 | MTR_8g076940 | 29.787 | 282 | 182 | 4 | 4 | 271 | 101 | 380 | 1.84e-30 | 120 |
| MS.gene24414.t1 | MTR_8g076940 | 29.787 | 282 | 182 | 4 | 4 | 271 | 101 | 380 | 2.21e-30 | 120 |
| MS.gene24414.t1 | MTR_8g006450 | 27.089 | 395 | 238 | 15 | 1 | 362 | 84 | 461 | 4.35e-27 | 112 |
| MS.gene24414.t1 | MTR_8g006495 | 29.514 | 288 | 171 | 10 | 92 | 362 | 76 | 348 | 7.13e-27 | 110 |
| MS.gene24414.t1 | MTR_8g100135 | 24.915 | 293 | 204 | 2 | 7 | 283 | 92 | 384 | 3.45e-25 | 106 |
| MS.gene24414.t1 | MTR_0147s0030 | 24.928 | 349 | 209 | 10 | 48 | 354 | 172 | 509 | 1.43e-22 | 99.8 |
| MS.gene24414.t1 | MTR_8g008530 | 24.552 | 391 | 236 | 11 | 10 | 354 | 120 | 497 | 2.37e-22 | 99.0 |
| MS.gene24414.t1 | MTR_7g055793 | 24.103 | 390 | 237 | 12 | 10 | 354 | 72 | 447 | 2.11e-20 | 92.8 |
| MS.gene24414.t1 | MTR_7g055793 | 24.103 | 390 | 237 | 12 | 10 | 354 | 127 | 502 | 2.51e-20 | 93.2 |
| MS.gene24414.t1 | MTR_4g071710 | 29.866 | 298 | 166 | 12 | 122 | 386 | 229 | 516 | 7.12e-20 | 91.7 |
| MS.gene24414.t1 | MTR_8g469360 | 25.700 | 393 | 219 | 16 | 14 | 354 | 31 | 402 | 4.11e-19 | 89.0 |
| MS.gene24414.t1 | MTR_1g032980 | 28.634 | 227 | 145 | 4 | 12 | 221 | 79 | 305 | 9.67e-19 | 87.4 |
| MS.gene24414.t1 | MTR_3g104560 | 30.738 | 244 | 141 | 7 | 119 | 345 | 271 | 503 | 1.22e-18 | 88.2 |
| MS.gene24414.t1 | MTR_3g104560 | 30.738 | 244 | 141 | 7 | 119 | 345 | 136 | 368 | 1.73e-18 | 87.0 |
| MS.gene24414.t1 | MTR_8g089190 | 29.070 | 172 | 120 | 1 | 111 | 280 | 176 | 347 | 8.22e-18 | 84.3 |
| MS.gene24414.t1 | MTR_2g019640 | 24.100 | 361 | 211 | 11 | 28 | 343 | 117 | 459 | 2.41e-17 | 84.0 |
| MS.gene24414.t1 | MTR_4g088195 | 25.746 | 268 | 166 | 9 | 133 | 381 | 245 | 498 | 3.22e-17 | 83.6 |
| MS.gene24414.t1 | MTR_6g017325 | 28.926 | 242 | 155 | 7 | 120 | 349 | 244 | 480 | 7.30e-17 | 82.4 |
| MS.gene24414.t1 | MTR_6g022450 | 29.348 | 184 | 117 | 6 | 175 | 349 | 301 | 480 | 2.38e-16 | 80.9 |
| MS.gene24414.t1 | MTR_4g109470 | 30.396 | 227 | 136 | 9 | 119 | 330 | 233 | 452 | 9.58e-16 | 79.0 |
| MS.gene24414.t1 | MTR_1g107295 | 27.132 | 258 | 152 | 8 | 126 | 356 | 241 | 489 | 1.14e-15 | 79.0 |
| MS.gene24414.t1 | MTR_1g035140 | 25.341 | 367 | 228 | 13 | 1 | 326 | 84 | 445 | 1.33e-15 | 78.6 |
| MS.gene24414.t1 | MTR_4g088170 | 25.101 | 247 | 160 | 8 | 133 | 359 | 245 | 486 | 1.59e-15 | 78.6 |
| MS.gene24414.t1 | MTR_8g466180 | 26.457 | 223 | 145 | 7 | 135 | 341 | 246 | 465 | 2.11e-15 | 78.2 |
| MS.gene24414.t1 | MTR_5g014230 | 39.759 | 83 | 49 | 1 | 290 | 371 | 2 | 84 | 2.12e-15 | 72.0 |
| MS.gene24414.t1 | MTR_4g088160 | 24.898 | 245 | 161 | 8 | 133 | 359 | 245 | 484 | 4.37e-15 | 77.0 |
| MS.gene24414.t1 | MTR_1g015860 | 28.631 | 241 | 150 | 7 | 119 | 345 | 263 | 495 | 4.89e-15 | 77.0 |
| MS.gene24414.t1 | MTR_5g021390 | 26.556 | 241 | 150 | 6 | 131 | 349 | 246 | 481 | 1.03e-14 | 75.9 |
| MS.gene24414.t1 | MTR_3g093530 | 28.070 | 228 | 145 | 8 | 137 | 353 | 282 | 501 | 1.46e-14 | 75.5 |
| MS.gene24414.t1 | MTR_8g012590 | 28.261 | 184 | 119 | 5 | 175 | 349 | 290 | 469 | 1.67e-14 | 75.5 |
| MS.gene24414.t1 | MTR_0171s0020 | 24.126 | 286 | 179 | 9 | 67 | 330 | 188 | 457 | 2.28e-14 | 74.7 |
| MS.gene24414.t1 | MTR_1g107300 | 27.222 | 180 | 122 | 3 | 183 | 356 | 1 | 177 | 4.39e-14 | 71.2 |
| MS.gene24414.t1 | MTR_2g072250 | 23.544 | 395 | 252 | 12 | 2 | 354 | 106 | 492 | 5.21e-14 | 73.9 |
| MS.gene24414.t1 | MTR_5g073020 | 27.803 | 223 | 145 | 7 | 137 | 349 | 254 | 470 | 1.27e-13 | 72.4 |
| MS.gene24414.t1 | MTR_7g006900 | 27.572 | 243 | 156 | 7 | 121 | 349 | 209 | 445 | 1.29e-13 | 72.4 |
| MS.gene24414.t1 | MTR_5g009110 | 23.963 | 217 | 127 | 5 | 170 | 352 | 185 | 397 | 1.39e-13 | 72.0 |
| MS.gene24414.t1 | MTR_2g437840 | 26.601 | 203 | 133 | 5 | 134 | 330 | 250 | 442 | 2.09e-13 | 72.0 |
| MS.gene24414.t1 | MTR_5g016410 | 24.434 | 221 | 159 | 5 | 133 | 351 | 249 | 463 | 2.15e-13 | 72.0 |
| MS.gene24414.t1 | MTR_3g076560 | 25.676 | 222 | 152 | 7 | 133 | 345 | 262 | 479 | 2.98e-13 | 71.6 |
| MS.gene24414.t1 | MTR_8g076290 | 25.103 | 243 | 143 | 6 | 107 | 326 | 224 | 450 | 3.40e-13 | 71.2 |
| MS.gene24414.t1 | MTR_0451s0010 | 27.413 | 259 | 155 | 9 | 127 | 370 | 57 | 297 | 3.41e-13 | 70.5 |
| MS.gene24414.t1 | MTR_5g009110 | 23.963 | 217 | 127 | 5 | 170 | 352 | 333 | 545 | 3.58e-13 | 71.2 |
| MS.gene24414.t1 | MTR_2g073420 | 27.530 | 247 | 161 | 8 | 133 | 366 | 254 | 495 | 3.72e-13 | 71.2 |
| MS.gene24414.t1 | MTR_8g073950 | 26.606 | 218 | 146 | 6 | 138 | 345 | 272 | 485 | 6.22e-13 | 70.5 |
| MS.gene24414.t1 | MTR_8g080520 | 24.933 | 373 | 220 | 15 | 5 | 330 | 119 | 478 | 8.18e-13 | 70.1 |
| MS.gene24414.t1 | MTR_3g076530 | 25.112 | 223 | 158 | 6 | 134 | 349 | 251 | 471 | 1.44e-12 | 69.3 |
| MS.gene24414.t1 | MTR_3g057980 | 28.780 | 205 | 120 | 7 | 138 | 326 | 247 | 441 | 1.60e-12 | 69.3 |
| MS.gene24414.t1 | MTR_1g062190 | 24.762 | 315 | 208 | 11 | 79 | 376 | 238 | 540 | 1.75e-12 | 69.3 |
| MS.gene24414.t1 | MTR_4g088420 | 26.946 | 167 | 107 | 7 | 170 | 326 | 16 | 177 | 2.00e-12 | 67.0 |
| MS.gene24414.t1 | MTR_4g095050 | 23.810 | 273 | 179 | 11 | 72 | 331 | 191 | 447 | 2.62e-12 | 68.6 |
| MS.gene24414.t1 | MTR_4g077210 | 24.670 | 227 | 160 | 6 | 133 | 352 | 251 | 473 | 3.96e-12 | 68.2 |
| MS.gene24414.t1 | MTR_8g076372 | 25.806 | 217 | 136 | 6 | 138 | 345 | 276 | 476 | 5.16e-12 | 67.8 |
| MS.gene24414.t1 | MTR_0059s0170 | 25.974 | 231 | 145 | 9 | 134 | 345 | 243 | 466 | 5.35e-12 | 67.4 |
| MS.gene24414.t1 | MTR_8g098565 | 28.947 | 190 | 122 | 4 | 173 | 350 | 289 | 477 | 5.50e-12 | 67.4 |
| MS.gene24414.t1 | MTR_2g072260 | 22.589 | 394 | 257 | 11 | 2 | 354 | 103 | 489 | 8.53e-12 | 67.0 |
| MS.gene24414.t1 | MTR_4g094775 | 24.296 | 284 | 188 | 10 | 72 | 344 | 188 | 455 | 9.18e-12 | 67.0 |
| MS.gene24414.t1 | MTR_6g008650 | 28.333 | 240 | 140 | 11 | 127 | 345 | 257 | 485 | 9.93e-12 | 66.6 |
| MS.gene24414.t1 | MTR_3g025260 | 28.049 | 246 | 157 | 8 | 119 | 349 | 234 | 474 | 1.17e-11 | 66.6 |
| MS.gene24414.t1 | MTR_4g035330 | 26.943 | 193 | 135 | 4 | 139 | 330 | 243 | 430 | 1.32e-11 | 66.2 |
| MS.gene24414.t1 | MTR_4g104570 | 25.140 | 179 | 125 | 3 | 185 | 357 | 1 | 176 | 1.40e-11 | 63.5 |
| MS.gene24414.t1 | MTR_4g104610 | 25.568 | 176 | 122 | 4 | 182 | 351 | 299 | 471 | 1.41e-11 | 66.2 |
| MS.gene24414.t1 | MTR_1g037370 | 23.684 | 228 | 161 | 6 | 134 | 352 | 242 | 465 | 1.50e-11 | 66.2 |
| MS.gene24414.t1 | MTR_3g076550 | 25.652 | 230 | 137 | 9 | 123 | 342 | 240 | 445 | 1.62e-11 | 65.9 |
| MS.gene24414.t1 | MTR_2g437880 | 26.168 | 214 | 152 | 3 | 137 | 348 | 256 | 465 | 1.79e-11 | 65.9 |
| MS.gene24414.t1 | MTR_6g042540 | 27.350 | 234 | 145 | 10 | 133 | 347 | 257 | 484 | 1.81e-11 | 65.9 |
| MS.gene24414.t1 | MTR_2g072340 | 21.563 | 371 | 237 | 11 | 29 | 354 | 133 | 494 | 2.49e-11 | 65.5 |
| MS.gene24414.t1 | MTR_5g094540 | 25.481 | 208 | 142 | 5 | 133 | 330 | 245 | 449 | 2.54e-11 | 65.5 |
| MS.gene24414.t1 | MTR_7g075610 | 25.862 | 232 | 157 | 7 | 123 | 345 | 242 | 467 | 2.73e-11 | 65.5 |
| MS.gene24414.t1 | MTR_8g046210 | 26.852 | 216 | 143 | 7 | 126 | 330 | 244 | 455 | 2.78e-11 | 65.5 |
| MS.gene24414.t1 | MTR_8g091680 | 24.033 | 362 | 232 | 12 | 1 | 342 | 74 | 412 | 2.89e-11 | 65.1 |
| MS.gene24414.t1 | MTR_4g104540 | 24.725 | 182 | 128 | 3 | 182 | 357 | 229 | 407 | 3.37e-11 | 64.7 |
| MS.gene24414.t1 | MTR_4g078110 | 24.464 | 233 | 163 | 7 | 122 | 345 | 213 | 441 | 6.33e-11 | 64.3 |
| MS.gene24414.t1 | MTR_4g062500 | 25.896 | 251 | 159 | 7 | 126 | 353 | 238 | 484 | 6.41e-11 | 64.3 |
| MS.gene24414.t1 | MTR_4g113650 | 26.344 | 186 | 125 | 5 | 186 | 365 | 326 | 505 | 7.91e-11 | 63.9 |
| MS.gene24414.t1 | MTR_3g024520 | 28.049 | 246 | 157 | 8 | 119 | 349 | 234 | 474 | 8.48e-11 | 63.9 |
| MS.gene24414.t1 | MTR_1g055325 | 25.200 | 250 | 166 | 8 | 133 | 371 | 264 | 503 | 8.59e-11 | 63.9 |
| MS.gene24414.t1 | MTR_3g025230 | 28.745 | 247 | 154 | 9 | 119 | 349 | 234 | 474 | 8.94e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24414.t1 | AT3G19270 | 62.694 | 386 | 127 | 4 | 1 | 372 | 81 | 463 | 8.88e-177 | 501 |
| MS.gene24414.t1 | AT3G19270 | 62.778 | 360 | 117 | 4 | 1 | 346 | 81 | 437 | 7.69e-165 | 469 |
| MS.gene24414.t1 | AT5G45340 | 54.712 | 382 | 152 | 4 | 1 | 369 | 83 | 456 | 8.76e-154 | 442 |
| MS.gene24414.t1 | AT4G19230 | 54.450 | 382 | 153 | 4 | 1 | 369 | 83 | 456 | 4.97e-153 | 440 |
| MS.gene24414.t1 | AT5G45340 | 54.167 | 360 | 144 | 4 | 1 | 347 | 83 | 434 | 1.23e-142 | 413 |
| MS.gene24414.t1 | AT4G19230 | 50.623 | 401 | 170 | 6 | 1 | 387 | 83 | 469 | 2.19e-142 | 414 |
| MS.gene24414.t1 | AT2G29090 | 52.332 | 386 | 166 | 4 | 1 | 371 | 1 | 383 | 5.99e-139 | 401 |
| MS.gene24414.t1 | AT2G29090 | 52.332 | 386 | 166 | 4 | 1 | 371 | 96 | 478 | 1.90e-136 | 399 |
| MS.gene24414.t1 | AT2G29090 | 52.332 | 386 | 166 | 4 | 1 | 371 | 96 | 478 | 1.90e-136 | 399 |
| MS.gene24414.t1 | AT1G05160 | 32.658 | 395 | 244 | 7 | 1 | 375 | 98 | 490 | 2.81e-68 | 224 |
| MS.gene24414.t1 | AT1G05160 | 32.658 | 395 | 244 | 7 | 1 | 375 | 98 | 490 | 2.81e-68 | 224 |
| MS.gene24414.t1 | AT2G32440 | 31.959 | 388 | 246 | 6 | 1 | 371 | 97 | 483 | 5.34e-63 | 210 |
| MS.gene24414.t1 | AT2G32440 | 31.959 | 388 | 246 | 6 | 1 | 371 | 97 | 483 | 5.34e-63 | 210 |
| MS.gene24414.t1 | AT5G05690 | 33.056 | 360 | 220 | 7 | 3 | 345 | 84 | 439 | 1.71e-56 | 192 |
| MS.gene24414.t1 | AT2G29090 | 46.957 | 230 | 105 | 3 | 1 | 216 | 96 | 322 | 5.19e-56 | 187 |
| MS.gene24414.t1 | AT1G19630 | 32.308 | 390 | 248 | 5 | 2 | 376 | 88 | 476 | 8.97e-56 | 190 |
| MS.gene24414.t1 | AT5G36110 | 33.504 | 391 | 233 | 9 | 1 | 371 | 89 | 472 | 7.01e-54 | 185 |
| MS.gene24414.t1 | AT1G19630 | 32.500 | 360 | 228 | 4 | 2 | 347 | 88 | 446 | 7.21e-54 | 185 |
| MS.gene24414.t1 | AT3G50660 | 30.353 | 425 | 220 | 10 | 9 | 371 | 98 | 508 | 1.41e-48 | 172 |
| MS.gene24414.t1 | AT5G05690 | 32.198 | 323 | 198 | 7 | 40 | 345 | 2 | 320 | 2.86e-48 | 167 |
| MS.gene24414.t1 | AT5G38970 | 27.548 | 363 | 243 | 7 | 6 | 352 | 4 | 362 | 5.54e-48 | 167 |
| MS.gene24414.t1 | AT5G38970 | 27.548 | 363 | 243 | 7 | 6 | 352 | 4 | 362 | 5.54e-48 | 167 |
| MS.gene24414.t1 | AT1G12740 | 28.532 | 361 | 241 | 5 | 6 | 350 | 93 | 452 | 1.44e-47 | 169 |
| MS.gene24414.t1 | AT3G13730 | 30.471 | 361 | 228 | 8 | 6 | 346 | 107 | 464 | 1.48e-47 | 168 |
| MS.gene24414.t1 | AT1G12740 | 28.532 | 361 | 241 | 5 | 6 | 350 | 87 | 446 | 1.53e-47 | 168 |
| MS.gene24414.t1 | AT5G38970 | 27.548 | 363 | 243 | 7 | 6 | 352 | 85 | 443 | 2.21e-47 | 168 |
| MS.gene24414.t1 | AT3G13730 | 30.471 | 361 | 228 | 8 | 6 | 346 | 107 | 464 | 2.35e-47 | 168 |
| MS.gene24414.t1 | AT3G30180 | 28.809 | 361 | 239 | 7 | 6 | 351 | 85 | 442 | 4.99e-46 | 164 |
| MS.gene24414.t1 | AT5G05690 | 31.861 | 317 | 199 | 5 | 3 | 306 | 84 | 396 | 5.19e-46 | 163 |
| MS.gene24414.t1 | AT1G12740 | 28.338 | 367 | 240 | 6 | 6 | 350 | 87 | 452 | 1.47e-45 | 163 |
| MS.gene24414.t1 | AT2G42850 | 29.091 | 385 | 247 | 7 | 6 | 371 | 102 | 479 | 1.33e-43 | 158 |
| MS.gene24414.t1 | AT1G19630 | 32.399 | 321 | 202 | 4 | 2 | 308 | 88 | 407 | 1.46e-43 | 157 |
| MS.gene24414.t1 | AT4G36380 | 30.028 | 363 | 228 | 10 | 6 | 345 | 125 | 484 | 1.34e-41 | 153 |
| MS.gene24414.t1 | AT5G38970 | 27.673 | 318 | 212 | 6 | 6 | 309 | 85 | 398 | 5.18e-40 | 147 |
| MS.gene24414.t1 | AT5G14400 | 28.255 | 361 | 213 | 10 | 10 | 349 | 2 | 337 | 6.55e-40 | 145 |
| MS.gene24414.t1 | AT5G14400 | 28.375 | 363 | 214 | 10 | 6 | 347 | 52 | 389 | 7.96e-40 | 146 |
| MS.gene24414.t1 | AT5G14400 | 28.219 | 365 | 216 | 10 | 6 | 349 | 52 | 391 | 1.15e-39 | 146 |
| MS.gene24414.t1 | AT1G55940 | 26.975 | 367 | 242 | 10 | 3 | 345 | 99 | 463 | 2.38e-37 | 141 |
| MS.gene24414.t1 | AT1G55940 | 26.344 | 372 | 248 | 10 | 3 | 350 | 99 | 468 | 4.54e-37 | 140 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT5G48000 | 27.182 | 401 | 258 | 13 | 1 | 376 | 86 | 477 | 4.42e-35 | 135 |
| MS.gene24414.t1 | AT1G73340 | 26.027 | 365 | 241 | 6 | 3 | 346 | 96 | 452 | 5.77e-35 | 134 |
| MS.gene24414.t1 | AT4G15393 | 28.655 | 342 | 216 | 9 | 21 | 341 | 103 | 437 | 9.47e-35 | 134 |
| MS.gene24414.t1 | AT5G48000 | 27.387 | 398 | 261 | 13 | 1 | 376 | 127 | 518 | 1.06e-34 | 134 |
| MS.gene24414.t1 | AT3G44970 | 27.855 | 359 | 236 | 9 | 11 | 349 | 96 | 451 | 4.43e-34 | 132 |
| MS.gene24414.t1 | AT3G50660 | 28.863 | 343 | 190 | 7 | 9 | 306 | 98 | 431 | 9.13e-34 | 130 |
| MS.gene24414.t1 | AT1G65670 | 29.326 | 341 | 212 | 8 | 21 | 341 | 103 | 434 | 1.22e-33 | 131 |
| MS.gene24414.t1 | AT1G78490 | 27.174 | 368 | 245 | 9 | 3 | 350 | 88 | 452 | 1.70e-33 | 130 |
| MS.gene24414.t1 | AT5G36130 | 48.148 | 135 | 68 | 2 | 239 | 371 | 1 | 135 | 9.21e-33 | 120 |
| MS.gene24414.t1 | AT4G15300 | 27.907 | 344 | 217 | 10 | 21 | 341 | 103 | 438 | 5.53e-31 | 123 |
| MS.gene24414.t1 | AT4G15300 | 27.907 | 344 | 217 | 10 | 21 | 341 | 93 | 428 | 5.68e-31 | 123 |
| MS.gene24414.t1 | AT4G15396 | 27.566 | 341 | 223 | 8 | 21 | 341 | 103 | 439 | 1.43e-30 | 122 |
| MS.gene24414.t1 | AT4G15396 | 27.566 | 341 | 223 | 8 | 21 | 341 | 103 | 439 | 1.79e-30 | 122 |
| MS.gene24414.t1 | AT4G15300 | 27.374 | 358 | 215 | 12 | 21 | 341 | 101 | 450 | 3.42e-28 | 115 |
| MS.gene24414.t1 | AT1G12740 | 25.000 | 284 | 199 | 4 | 3 | 273 | 84 | 366 | 2.98e-26 | 108 |
| MS.gene24414.t1 | AT3G30290 | 25.439 | 342 | 228 | 8 | 21 | 341 | 33 | 368 | 7.78e-26 | 108 |
| MS.gene24414.t1 | AT5G36110 | 28.763 | 299 | 186 | 7 | 1 | 280 | 89 | 379 | 2.31e-25 | 106 |
| MS.gene24414.t1 | AT4G15393 | 26.974 | 304 | 198 | 8 | 21 | 307 | 103 | 399 | 6.91e-25 | 105 |
| MS.gene24414.t1 | AT1G78490 | 26.087 | 322 | 218 | 8 | 3 | 307 | 88 | 406 | 8.14e-24 | 102 |
| MS.gene24414.t1 | AT1G11680 | 24.500 | 400 | 260 | 13 | 1 | 367 | 86 | 476 | 3.07e-23 | 101 |
| MS.gene24414.t1 | AT4G15396 | 25.948 | 343 | 205 | 9 | 21 | 341 | 103 | 418 | 4.07e-23 | 100 |
| MS.gene24414.t1 | AT5G14400 | 25.874 | 286 | 185 | 8 | 6 | 271 | 52 | 330 | 2.90e-22 | 97.1 |
| MS.gene24414.t1 | AT4G15396 | 26.073 | 303 | 204 | 7 | 21 | 307 | 103 | 401 | 4.77e-22 | 97.4 |
| MS.gene24414.t1 | AT2G42850 | 27.090 | 299 | 192 | 7 | 1 | 280 | 97 | 388 | 7.76e-21 | 93.6 |
| MS.gene24414.t1 | AT4G15310 | 26.471 | 340 | 228 | 7 | 25 | 346 | 110 | 445 | 1.15e-20 | 94.0 |
| MS.gene24414.t1 | AT4G15393 | 25.769 | 260 | 171 | 6 | 63 | 306 | 112 | 365 | 4.82e-19 | 88.2 |
| MS.gene24414.t1 | AT4G36380 | 27.018 | 285 | 186 | 8 | 6 | 271 | 125 | 406 | 6.73e-19 | 88.2 |
| MS.gene24414.t1 | AT5G67310 | 29.565 | 230 | 147 | 8 | 126 | 348 | 248 | 469 | 4.91e-18 | 86.3 |
| MS.gene24414.t1 | AT4G37370 | 24.017 | 229 | 164 | 5 | 134 | 359 | 247 | 468 | 1.32e-17 | 84.7 |
| MS.gene24414.t1 | AT4G37340 | 25.660 | 265 | 177 | 7 | 97 | 351 | 207 | 461 | 6.83e-17 | 82.8 |
| MS.gene24414.t1 | AT4G37320 | 25.000 | 220 | 159 | 3 | 134 | 352 | 248 | 462 | 1.28e-16 | 81.6 |
| MS.gene24414.t1 | AT2G26170 | 29.707 | 239 | 142 | 7 | 119 | 341 | 173 | 401 | 2.25e-16 | 80.9 |
| MS.gene24414.t1 | AT4G37400 | 26.860 | 242 | 160 | 6 | 113 | 345 | 223 | 456 | 2.36e-16 | 80.9 |
| MS.gene24414.t1 | AT2G26170 | 29.707 | 239 | 142 | 7 | 119 | 341 | 256 | 484 | 2.89e-16 | 80.9 |
| MS.gene24414.t1 | AT2G45580 | 26.180 | 233 | 154 | 6 | 119 | 338 | 83 | 310 | 5.98e-16 | 79.0 |
| MS.gene24414.t1 | AT2G46960 | 24.427 | 393 | 237 | 16 | 2 | 347 | 108 | 487 | 7.37e-16 | 79.7 |
| MS.gene24414.t1 | AT2G45580 | 26.180 | 233 | 154 | 6 | 119 | 338 | 237 | 464 | 9.34e-16 | 79.3 |
| MS.gene24414.t1 | AT5G25120 | 29.839 | 248 | 135 | 12 | 157 | 381 | 262 | 493 | 1.59e-15 | 78.6 |
| MS.gene24414.t1 | AT4G13770 | 26.721 | 247 | 169 | 8 | 113 | 349 | 223 | 467 | 1.76e-15 | 78.2 |
| MS.gene24414.t1 | AT4G37410 | 26.872 | 227 | 151 | 7 | 119 | 337 | 230 | 449 | 2.24e-15 | 78.2 |
| MS.gene24414.t1 | AT4G37310 | 25.620 | 242 | 173 | 4 | 126 | 360 | 242 | 483 | 2.52e-15 | 77.8 |
| MS.gene24414.t1 | AT1G50520 | 23.673 | 245 | 170 | 5 | 126 | 357 | 250 | 490 | 3.28e-15 | 77.4 |
| MS.gene24414.t1 | AT5G24910 | 23.345 | 287 | 187 | 9 | 82 | 345 | 225 | 501 | 3.46e-15 | 77.4 |
| MS.gene24414.t1 | AT1G66540 | 25.333 | 225 | 151 | 6 | 134 | 351 | 75 | 289 | 4.02e-15 | 76.3 |
| MS.gene24414.t1 | AT4G37360 | 28.415 | 183 | 125 | 4 | 171 | 351 | 283 | 461 | 4.78e-15 | 77.0 |
| MS.gene24414.t1 | AT2G46960 | 25.266 | 376 | 217 | 16 | 23 | 347 | 9 | 371 | 5.71e-15 | 76.3 |
| MS.gene24414.t1 | AT5G57220 | 26.877 | 253 | 167 | 7 | 108 | 350 | 211 | 455 | 5.73e-15 | 76.6 |
| MS.gene24414.t1 | AT1G66540 | 25.333 | 225 | 151 | 6 | 134 | 351 | 134 | 348 | 7.03e-15 | 75.9 |
| MS.gene24414.t1 | AT5G25130 | 28.378 | 222 | 136 | 8 | 173 | 381 | 282 | 493 | 7.81e-15 | 76.3 |
| MS.gene24414.t1 | AT5G04330 | 24.786 | 234 | 153 | 6 | 131 | 345 | 239 | 468 | 1.62e-14 | 75.5 |
| MS.gene24414.t1 | AT2G34500 | 22.969 | 357 | 211 | 13 | 28 | 343 | 113 | 446 | 1.82e-14 | 75.1 |
| MS.gene24414.t1 | AT3G20940 | 25.714 | 245 | 166 | 5 | 126 | 357 | 247 | 488 | 2.74e-14 | 74.7 |
| MS.gene24414.t1 | AT4G37430 | 25.424 | 236 | 162 | 6 | 122 | 350 | 236 | 464 | 2.74e-14 | 74.7 |
| MS.gene24414.t1 | AT2G34490 | 22.841 | 359 | 213 | 14 | 28 | 343 | 114 | 451 | 2.94e-14 | 74.7 |
| MS.gene24414.t1 | AT3G28740 | 25.514 | 243 | 172 | 5 | 111 | 350 | 232 | 468 | 4.92e-14 | 73.9 |
| MS.gene24414.t1 | AT4G31940 | 24.500 | 200 | 133 | 6 | 145 | 330 | 274 | 469 | 1.47e-13 | 72.4 |
| MS.gene24414.t1 | AT3G26280 | 25.909 | 220 | 146 | 8 | 124 | 330 | 254 | 469 | 2.65e-13 | 71.6 |
| MS.gene24414.t1 | AT3G26280 | 25.909 | 220 | 146 | 8 | 124 | 330 | 237 | 452 | 3.17e-13 | 71.2 |
| MS.gene24414.t1 | AT4G37330 | 24.664 | 223 | 154 | 4 | 134 | 351 | 245 | 458 | 4.68e-13 | 70.9 |
| MS.gene24414.t1 | AT2G24180 | 26.829 | 205 | 135 | 7 | 133 | 326 | 248 | 448 | 5.47e-13 | 70.9 |
| MS.gene24414.t1 | AT4G15110 | 23.041 | 217 | 129 | 3 | 170 | 352 | 341 | 553 | 6.41e-13 | 70.5 |
| MS.gene24414.t1 | AT5G36140 | 25.000 | 232 | 149 | 7 | 1 | 214 | 85 | 309 | 2.43e-12 | 67.8 |
| MS.gene24414.t1 | AT3G53130 | 23.509 | 285 | 194 | 10 | 80 | 350 | 239 | 513 | 2.99e-12 | 68.6 |
| MS.gene24414.t1 | AT1G64940 | 28.191 | 188 | 126 | 3 | 173 | 353 | 298 | 483 | 3.67e-12 | 68.2 |
| MS.gene24414.t1 | AT2G22330 | 25.214 | 234 | 152 | 7 | 138 | 357 | 311 | 535 | 3.73e-12 | 68.2 |
| MS.gene24414.t1 | AT2G22330 | 26.293 | 232 | 152 | 9 | 138 | 357 | 288 | 512 | 3.93e-12 | 68.2 |
| MS.gene24414.t1 | AT5G25140 | 30.108 | 186 | 111 | 9 | 154 | 326 | 259 | 438 | 4.21e-12 | 67.8 |
| MS.gene24414.t1 | AT2G23190 | 23.482 | 247 | 178 | 6 | 109 | 351 | 266 | 505 | 6.47e-12 | 67.4 |
| MS.gene24414.t1 | AT1G74110 | 22.363 | 237 | 160 | 6 | 134 | 351 | 280 | 511 | 7.41e-12 | 67.4 |
| MS.gene24414.t1 | AT2G23220 | 21.818 | 220 | 164 | 4 | 134 | 351 | 263 | 476 | 9.54e-12 | 67.0 |
| MS.gene24414.t1 | AT3G26160 | 23.963 | 217 | 153 | 4 | 124 | 330 | 236 | 450 | 9.59e-12 | 67.0 |
| MS.gene24414.t1 | AT5G07990 | 25.424 | 236 | 155 | 7 | 133 | 352 | 243 | 473 | 1.32e-11 | 66.2 |
| MS.gene24414.t1 | AT5G36220 | 23.214 | 224 | 160 | 5 | 133 | 352 | 253 | 468 | 1.75e-11 | 65.9 |
| MS.gene24414.t1 | AT2G46950 | 27.234 | 235 | 146 | 7 | 134 | 353 | 323 | 547 | 2.14e-11 | 65.9 |
| MS.gene24414.t1 | AT5G36220 | 23.214 | 224 | 160 | 5 | 133 | 352 | 107 | 322 | 2.19e-11 | 65.1 |
| MS.gene24414.t1 | AT3G26290 | 26.238 | 202 | 135 | 6 | 135 | 326 | 258 | 455 | 2.52e-11 | 65.5 |
| MS.gene24414.t1 | AT3G26290 | 26.238 | 202 | 135 | 6 | 135 | 326 | 245 | 442 | 2.69e-11 | 65.5 |
| MS.gene24414.t1 | AT3G26230 | 29.448 | 163 | 100 | 7 | 180 | 330 | 289 | 448 | 5.63e-11 | 64.3 |
Find 84 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATGGCATGAAAGTATT+TGG | 0.142965 | 1.1:+3664407 | None:intergenic |
| GGCATTGCTTTCCACCCTTT+TGG | 0.171251 | 1.1:+3664606 | None:intergenic |
| AGGGCTAAGGCTTCAATTTC+AGG | 0.177274 | 1.1:+3666566 | None:intergenic |
| GCTTATACCTTATAGGTAAT+TGG | 0.207342 | 1.1:+3665096 | None:intergenic |
| ATTAACTGCTTATACCTTAT+AGG | 0.209223 | 1.1:+3665089 | None:intergenic |
| AAGAGCTAAAGAAGAATTAT+TGG | 0.218720 | 1.1:-3666080 | MS.gene24414:CDS |
| CCAAATGATGGATCATAATA+AGG | 0.218766 | 1.1:+3664336 | None:intergenic |
| TCAGCTACTGCTTCTCTAAA+TGG | 0.254249 | 1.1:+3664862 | None:intergenic |
| GAAATTGGAGATAACATTAT+TGG | 0.259111 | 1.1:-3665769 | MS.gene24414:CDS |
| ATATTATCTGATGATGAAAT+TGG | 0.294172 | 1.1:-3665784 | MS.gene24414:CDS |
| CCCTTTCCACCATCAAATCT+TGG | 0.312974 | 1.1:-3666547 | MS.gene24414:CDS |
| ATGGTAAACTACAGCTGAAT+TGG | 0.316888 | 1.1:-3665137 | MS.gene24414:CDS |
| CCTTATTATGATCCATCATT+TGG | 0.343940 | 1.1:-3664336 | MS.gene24414:CDS |
| AAACATGCCAATTACCTATA+AGG | 0.352173 | 1.1:-3665103 | MS.gene24414:intron |
| GGCATGAAAGTATTTGGTTT+TGG | 0.356492 | 1.1:+3664413 | None:intergenic |
| CCAAATACTTTCATGCCATT+TGG | 0.359912 | 1.1:-3664407 | MS.gene24414:CDS |
| CCATTCAAAGGCAATGGAAA+TGG | 0.361111 | 1.1:+3663739 | None:intergenic |
| CCTTTCCACCATCAAATCTT+GGG | 0.366162 | 1.1:-3666546 | MS.gene24414:CDS |
| ATCATTTGGTCGTCAAGTTT+AGG | 0.368718 | 1.1:-3664322 | MS.gene24414:intron |
| CTTGAAGGGTTGAATTTATG+AGG | 0.372482 | 1.1:+3664540 | None:intergenic |
| CCTCGATTCACTTCGCAACT+TGG | 0.379709 | 1.1:-3666591 | MS.gene24414:CDS |
| CCATTTCCATTGCCTTTGAA+TGG | 0.384022 | 1.1:-3663739 | MS.gene24414:CDS |
| TCACACTGTGGGATTCAATA+TGG | 0.388946 | 1.1:-3663763 | MS.gene24414:CDS |
| TTTACACATTCGAGAAGTTT+CGG | 0.400562 | 1.1:+3665676 | None:intergenic |
| ATTCAACCCTTCAAGATTTG+AGG | 0.401761 | 1.1:-3664532 | MS.gene24414:intron |
| AAAAGCAAAGAACGTTTGAT+TGG | 0.407013 | 1.1:-3666686 | MS.gene24414:CDS |
| CTTTGAATGGACTCCCAGCC+AGG | 0.412377 | 1.1:-3663726 | MS.gene24414:intron |
| TGGCAATGAGCTTGCTAAGC+TGG | 0.415341 | 1.1:-3664363 | MS.gene24414:CDS |
| GGAAATAATTAGTGAGAGGA+AGG | 0.418556 | 1.1:-3665878 | MS.gene24414:CDS |
| ATTCATACCTCAAATCTTGA+AGG | 0.422368 | 1.1:+3664525 | None:intergenic |
| ATCATCACCCCAAGATTTGA+TGG | 0.427411 | 1.1:+3666538 | None:intergenic |
| GTGAGTACCATTTGCGTTTG+AGG | 0.428828 | 1.1:-3666637 | MS.gene24414:CDS |
| TTTAGCTCTTCCCTCAACCT+TGG | 0.449838 | 1.1:+3666093 | None:intergenic |
| CAAATGATGGATCATAATAA+GGG | 0.450882 | 1.1:+3664337 | None:intergenic |
| GATTCTCTCCAACACCTGGC+TGG | 0.454938 | 1.1:+3663712 | None:intergenic |
| GGGTTGAATTTATGAGGCTC+TGG | 0.474079 | 1.1:+3664546 | None:intergenic |
| CCAGGATTCCTAATCCCAAA+AGG | 0.474118 | 1.1:-3664621 | MS.gene24414:intron |
| CATTCAAAGGCAATGGAAAT+GGG | 0.474896 | 1.1:+3663740 | None:intergenic |
| TGTGTACCAGGAATTTGAGT+TGG | 0.476181 | 1.1:+3666030 | None:intergenic |
| CCAAGATTTGATGGTGGAAA+GGG | 0.481164 | 1.1:+3666547 | None:intergenic |
| AACACAAAACGTGCAGCTTC+AGG | 0.483985 | 1.1:+3666746 | None:intergenic |
| ATCAAATCTTGGGGTGATGA+TGG | 0.495039 | 1.1:-3666536 | MS.gene24414:CDS |
| ACTTTCATGCCATTTGGTAG+TGG | 0.497443 | 1.1:-3664401 | MS.gene24414:CDS |
| AGCTGTTTCTTGAATTGGAA+AGG | 0.501218 | 1.1:-3665820 | MS.gene24414:CDS |
| GCAATCTAGAGCCAAGGTTG+AGG | 0.509932 | 1.1:-3666104 | MS.gene24414:intron |
| AGCTTAGCAAGCTCATTGCC+AGG | 0.510940 | 1.1:+3664365 | None:intergenic |
| TAAGCTTCCTCAAACGCAAA+TGG | 0.513067 | 1.1:+3666630 | None:intergenic |
| TAAACTTGACGACCAAATGA+TGG | 0.513374 | 1.1:+3664324 | None:intergenic |
| TTGAATTGGAAAGGAGAAGG+AGG | 0.514480 | 1.1:-3665811 | MS.gene24414:CDS |
| CAATCTAGAGCCAAGGTTGA+GGG | 0.517826 | 1.1:-3666103 | MS.gene24414:intron |
| ATTCTCTCCAACACCTGGCT+GGG | 0.529923 | 1.1:+3663713 | None:intergenic |
| ACAATTCACATGGAAAATGA+TGG | 0.536909 | 1.1:-3665156 | MS.gene24414:CDS |
| CCCAAGATTTGATGGTGGAA+AGG | 0.538660 | 1.1:+3666546 | None:intergenic |
| TTCTTGAATTGGAAAGGAGA+AGG | 0.539562 | 1.1:-3665814 | MS.gene24414:CDS |
| TTTGATGGTGGAAAGGGCTA+AGG | 0.541061 | 1.1:+3666553 | None:intergenic |
| GCAAATGGTACTCACCTTGG+TGG | 0.541284 | 1.1:+3666645 | None:intergenic |
| GTGAAGGCAAGAGAGAAACT+TGG | 0.544371 | 1.1:-3665913 | MS.gene24414:intron |
| GGGAGTCCATTCAAAGGCAA+TGG | 0.544618 | 1.1:+3663733 | None:intergenic |
| TGAAGGAAATAATTAGTGAG+AGG | 0.545555 | 1.1:-3665882 | MS.gene24414:CDS |
| TTTGGTATATAGGTTGGAAG+TGG | 0.546819 | 1.1:-3663791 | MS.gene24414:intron |
| CCACAGCTACTGTCATGACA+TGG | 0.547135 | 1.1:-3665723 | MS.gene24414:CDS |
| GCATGTACTCCACTACCAAA+TGG | 0.553843 | 1.1:+3664392 | None:intergenic |
| GAAACTTCTCGAATGTGTAA+AGG | 0.561471 | 1.1:-3665674 | MS.gene24414:intron |
| TTCATACCTCAAATCTTGAA+GGG | 0.564125 | 1.1:+3664526 | None:intergenic |
| AACGCAAATGGTACTCACCT+TGG | 0.565917 | 1.1:+3666642 | None:intergenic |
| AATTATTGGATTGTTGACAA+TGG | 0.572734 | 1.1:-3666066 | MS.gene24414:CDS |
| CAGGATTCCTAATCCCAAAA+GGG | 0.575886 | 1.1:-3664620 | MS.gene24414:CDS |
| TATCCTACAAAATCCCATGC+AGG | 0.583588 | 1.1:-3663522 | MS.gene24414:CDS |
| GTATATAGGTTGGAAGTGGT+AGG | 0.592193 | 1.1:-3663787 | MS.gene24414:intron |
| CAAGTTGCGAAGTGAATCGA+GGG | 0.600200 | 1.1:+3666592 | None:intergenic |
| CTTTCCACCATCAAATCTTG+GGG | 0.609532 | 1.1:-3666545 | MS.gene24414:CDS |
| TGATGAATATTTCTGAACAG+TGG | 0.615557 | 1.1:+3664585 | None:intergenic |
| AGTGGAGTACATGCTTGTCC+TGG | 0.616452 | 1.1:-3664383 | MS.gene24414:CDS |
| CCAAGTTGCGAAGTGAATCG+AGG | 0.629437 | 1.1:+3666591 | None:intergenic |
| CTGGCTGGGAGTCCATTCAA+AGG | 0.643521 | 1.1:+3663727 | None:intergenic |
| GATTCCTAATCCCAAAAGGG+TGG | 0.645660 | 1.1:-3664617 | MS.gene24414:CDS |
| CCATGTCATGACAGTAGCTG+TGG | 0.646176 | 1.1:+3665723 | None:intergenic |
| GTTTGAGGAAGCTTATTCAG+AGG | 0.650161 | 1.1:-3666622 | MS.gene24414:CDS |
| CACAGCTACTGTCATGACAT+GGG | 0.650868 | 1.1:-3665722 | MS.gene24414:CDS |
| AAGTGGTAGGATCACACTGT+GGG | 0.657629 | 1.1:-3663774 | MS.gene24414:CDS |
| GTAGCTGATGTAGAGTACAA+AGG | 0.662288 | 1.1:-3664847 | MS.gene24414:intron |
| ATCACCCCAAGATTTGATGG+TGG | 0.682987 | 1.1:+3666541 | None:intergenic |
| TGAGCAGAAGACAATTCACA+TGG | 0.710878 | 1.1:-3665166 | MS.gene24414:CDS |
| GAAGTGGTAGGATCACACTG+TGG | 0.723901 | 1.1:-3663775 | MS.gene24414:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAGATTAATTTA+TGG | + | chr1.1:3666663-3666682 | None:intergenic | 10.0% |
| !! | CATTTAATTAAAAAAATGTA+TGG | + | chr1.1:3666314-3666333 | None:intergenic | 10.0% |
| !! | AATAAAATGTTAGAAACAAA+AGG | - | chr1.1:3666054-3666073 | MS.gene24414:CDS | 15.0% |
| !! | ATAATAATCAATTCAATCAT+TGG | + | chr1.1:3663967-3663986 | None:intergenic | 15.0% |
| !!! | AACTATGTAATTTTTTTCAT+AGG | - | chr1.1:3666701-3666720 | MS.gene24414:CDS | 15.0% |
| !!! | AATAAATGAATTTTTGCATT+TGG | + | chr1.1:3666277-3666296 | None:intergenic | 15.0% |
| !!! | CATTTGGTTTATTATTTATA+AGG | + | chr1.1:3666261-3666280 | None:intergenic | 15.0% |
| !!! | TTAACTTTAGTTTATTTTCT+TGG | - | chr1.1:3664647-3664666 | MS.gene24414:intron | 15.0% |
| !! | AAAAGATTAATTTATGGCTA+TGG | + | chr1.1:3666657-3666676 | None:intergenic | 20.0% |
| !! | TAATAAACACAACAAGAATA+AGG | + | chr1.1:3665309-3665328 | None:intergenic | 20.0% |
| !! | TATGAATGAGTCAATTATAA+TGG | - | chr1.1:3665762-3665781 | MS.gene24414:CDS | 20.0% |
| !! | TCAATTATAATGGTAATACA+TGG | - | chr1.1:3665772-3665791 | MS.gene24414:CDS | 20.0% |
| !! | TTAAATGCACAAATTCATTT+AGG | - | chr1.1:3666327-3666346 | MS.gene24414:intron | 20.0% |
| !! | TTTAAGGAAATGAAAAAAGT+AGG | - | chr1.1:3663774-3663793 | MS.gene24414:CDS | 20.0% |
| !! | TTTGAGTAAACATTAATTAC+TGG | + | chr1.1:3664716-3664735 | None:intergenic | 20.0% |
| !!! | AAAATGGGAAATTTTTTCTA+GGG | - | chr1.1:3665482-3665501 | MS.gene24414:intron | 20.0% |
| !!! | AATCTAAGAATTGAATTTTG+TGG | - | chr1.1:3665334-3665353 | MS.gene24414:intron | 20.0% |
| !!! | ATATTATCTGATGATGAAAT+TGG | - | chr1.1:3664487-3664506 | MS.gene24414:intron | 20.0% |
| !!! | ATGCATAATTAACACTTTTA+AGG | - | chr1.1:3663758-3663777 | MS.gene24414:CDS | 20.0% |
| !!! | ATGTAATTTTTTTCATAGGT+GGG | - | chr1.1:3666705-3666724 | MS.gene24414:CDS | 20.0% |
| !!! | ATTTTGTTATTTGTTGATAC+AGG | - | chr1.1:3665830-3665849 | MS.gene24414:CDS | 20.0% |
| !!! | CTAAAGAATCTTTTATCATA+TGG | + | chr1.1:3665027-3665046 | None:intergenic | 20.0% |
| !!! | TATGTAATTTTTTTCATAGG+TGG | - | chr1.1:3666704-3666723 | MS.gene24414:CDS | 20.0% |
| !!! | TTTACTAAATTGTTGTTATG+TGG | - | chr1.1:3664040-3664059 | MS.gene24414:intron | 20.0% |
| !!! | TTTTACTATACTTTTTGTGA+AGG | - | chr1.1:3664342-3664361 | MS.gene24414:CDS | 20.0% |
| ! | AAGAGCTAAAGAAGAATTAT+TGG | - | chr1.1:3664191-3664210 | MS.gene24414:intron | 25.0% |
| ! | AATAAAAAGAGATCAACGAA+TGG | - | chr1.1:3666011-3666030 | MS.gene24414:CDS | 25.0% |
| ! | AATTATTGGATTGTTGACAA+TGG | - | chr1.1:3664205-3664224 | MS.gene24414:intron | 25.0% |
| ! | AGAGATATTTGATCAGTTAT+TGG | + | chr1.1:3666409-3666428 | None:intergenic | 25.0% |
| ! | AGGGTCAATAATTAATTAAG+TGG | - | chr1.1:3664085-3664104 | MS.gene24414:intron | 25.0% |
| ! | ATAATGGTAATACATGGTTA+AGG | - | chr1.1:3665778-3665797 | MS.gene24414:CDS | 25.0% |
| ! | ATGCTAGAAAAAGATTCATT+GGG | - | chr1.1:3666589-3666608 | MS.gene24414:CDS | 25.0% |
| ! | ATTAACTGCTTATACCTTAT+AGG | + | chr1.1:3665185-3665204 | None:intergenic | 25.0% |
| ! | GAAATTGGAGATAACATTAT+TGG | - | chr1.1:3664502-3664521 | MS.gene24414:intron | 25.0% |
| ! | TTCAGCATAGTATAATAGTA+TGG | + | chr1.1:3665547-3665566 | None:intergenic | 25.0% |
| !! | AAAATGAACGTTTTTCACAT+TGG | + | chr1.1:3665575-3665594 | None:intergenic | 25.0% |
| !! | AAATGAACGTTTTTCACATT+GGG | + | chr1.1:3665574-3665593 | None:intergenic | 25.0% |
| !! | AATTTAAAATCACGCGATAT+AGG | + | chr1.1:3663843-3663862 | None:intergenic | 25.0% |
| !! | AATTTCTCGAATTTTTCTCT+TGG | + | chr1.1:3664628-3664647 | None:intergenic | 25.0% |
| !! | ATTTTATAACAAGTGCTCTT+AGG | + | chr1.1:3666148-3666167 | None:intergenic | 25.0% |
| !! | CAATTTAAAACCACAATGAT+TGG | - | chr1.1:3663940-3663959 | MS.gene24414:intron | 25.0% |
| !! | TATGTGAAAGATTTTGCTTT+TGG | - | chr1.1:3666462-3666481 | MS.gene24414:intron | 25.0% |
| !! | TGAATATGTGTTGAGTTTTA+AGG | - | chr1.1:3664851-3664870 | MS.gene24414:CDS | 25.0% |
| !! | TGAATTTTGTGGAATTTTTC+AGG | - | chr1.1:3665345-3665364 | MS.gene24414:intron | 25.0% |
| !! | TTCTGGCATTAATTTTTGTA+TGG | - | chr1.1:3664016-3664035 | MS.gene24414:intron | 25.0% |
| !!! | ACTTTAGTTTATTTTCTTGG+CGG | - | chr1.1:3664650-3664669 | MS.gene24414:intron | 25.0% |
| !!! | AGATTTTGCTTTTGGTATAT+AGG | - | chr1.1:3666470-3666489 | MS.gene24414:intron | 25.0% |
| !!! | ATTTGCAAAAGCATTCAAAA+TGG | - | chr1.1:3665466-3665485 | MS.gene24414:intron | 25.0% |
| !!! | CAAAATGGGAAATTTTTTCT+AGG | - | chr1.1:3665481-3665500 | MS.gene24414:intron | 25.0% |
| !!! | CAAATGATGGATCATAATAA+GGG | + | chr1.1:3665937-3665956 | None:intergenic | 25.0% |
| !!! | GCTATTTGTTTTTGTTAAAC+TGG | - | chr1.1:3664878-3664897 | MS.gene24414:CDS | 25.0% |
| !!! | TCAAACTTTGTTATTAGTGT+CGG | - | chr1.1:3665238-3665257 | MS.gene24414:intron | 25.0% |
| !!! | TTTGCAAAAGCATTCAAAAT+GGG | - | chr1.1:3665467-3665486 | MS.gene24414:intron | 25.0% |
| !!! | TTTGTATGTTTTTGTCAAAC+AGG | + | chr1.1:3664829-3664848 | None:intergenic | 25.0% |
| AAAAGCAAAGAACGTTTGAT+TGG | - | chr1.1:3663585-3663604 | MS.gene24414:intron | 30.0% | |
| AAACATGCCAATTACCTATA+AGG | - | chr1.1:3665168-3665187 | MS.gene24414:CDS | 30.0% | |
| AAACTGCAAAAGATCAAAGA+TGG | + | chr1.1:3664116-3664135 | None:intergenic | 30.0% | |
| AACAAAAGGAGATCAATGAA+TGG | - | chr1.1:3666068-3666087 | MS.gene24414:CDS | 30.0% | |
| ACAATTCACATGGAAAATGA+TGG | - | chr1.1:3665115-3665134 | MS.gene24414:CDS | 30.0% | |
| ACATGAGAATATTATGAACC+AGG | - | chr1.1:3665632-3665651 | MS.gene24414:intron | 30.0% | |
| ACTTGAATCACATTTGAGTA+AGG | + | chr1.1:3663911-3663930 | None:intergenic | 30.0% | |
| ATTCATACCTCAAATCTTGA+AGG | + | chr1.1:3665749-3665768 | None:intergenic | 30.0% | |
| CATGCTAGAAAAAGATTCAT+TGG | - | chr1.1:3666588-3666607 | MS.gene24414:CDS | 30.0% | |
| CCTTATTATGATCCATCATT+TGG | - | chr1.1:3665935-3665954 | MS.gene24414:intron | 30.0% | |
| GCTTATACCTTATAGGTAAT+TGG | + | chr1.1:3665178-3665197 | None:intergenic | 30.0% | |
| TAATTTATGGCTATGGAAAG+TGG | + | chr1.1:3666650-3666669 | None:intergenic | 30.0% | |
| TCAAGTGAGACTATAATTTG+TGG | - | chr1.1:3665063-3665082 | MS.gene24414:intron | 30.0% | |
| TGAAGGAAATAATTAGTGAG+AGG | - | chr1.1:3664389-3664408 | MS.gene24414:CDS | 30.0% | |
| TGCTAGAAAAAGATTCATTG+GGG | - | chr1.1:3666590-3666609 | MS.gene24414:CDS | 30.0% | |
| TTCATACCTCAAATCTTGAA+GGG | + | chr1.1:3665748-3665767 | None:intergenic | 30.0% | |
| TTTACACATTCGAGAAGTTT+CGG | + | chr1.1:3664598-3664617 | None:intergenic | 30.0% | |
| ! | ATATTGAAGTGTCACATTTC+TGG | - | chr1.1:3663999-3664018 | MS.gene24414:intron | 30.0% |
| ! | GTTGGTATTCTCAAAGTTTT+TGG | - | chr1.1:3664145-3664164 | MS.gene24414:intron | 30.0% |
| ! | TATCGCGTGATTTTAAATTG+CGG | - | chr1.1:3663844-3663863 | MS.gene24414:intron | 30.0% |
| ! | TGATGAATATTTCTGAACAG+TGG | + | chr1.1:3665689-3665708 | None:intergenic | 30.0% |
| ! | TTTCTTTTTCTTCCTTAGAG+TGG | - | chr1.1:3666224-3666243 | MS.gene24414:intron | 30.0% |
| !! | ACAATACAAAAAAGCACTCT+TGG | - | chr1.1:3664261-3664280 | MS.gene24414:intron | 30.0% |
| !! | ATCAAACGTTCTTTGCTTTT+AGG | + | chr1.1:3663585-3663604 | None:intergenic | 30.0% |
| !! | CCAAATGATGGATCATAATA+AGG | + | chr1.1:3665938-3665957 | None:intergenic | 30.0% |
| !! | TTTGCTTTTGGTATATAGGT+TGG | - | chr1.1:3666474-3666493 | MS.gene24414:intron | 30.0% |
| !!! | GAAACTTGGAAGTATTTTGA+AGG | - | chr1.1:3664372-3664391 | MS.gene24414:CDS | 30.0% |
| !!! | TCTTTGCTTTTAGGATATGT+TGG | + | chr1.1:3663576-3663595 | None:intergenic | 30.0% |
| !!! | TTGCAGTTTTCTTTTGAAGT+TGG | - | chr1.1:3664127-3664146 | MS.gene24414:intron | 30.0% |
| !!! | TTTTGAGCTGTTTCTTGAAT+TGG | - | chr1.1:3664446-3664465 | MS.gene24414:intron | 30.0% |
| AATCATTGGTCCAATCATTG+TGG | + | chr1.1:3663953-3663972 | None:intergenic | 35.0% | |
| ATAGCTGTGACATTACATAG+TGG | + | chr1.1:3665517-3665536 | None:intergenic | 35.0% | |
| ATCATTTGGTCGTCAAGTTT+AGG | - | chr1.1:3665949-3665968 | MS.gene24414:intron | 35.0% | |
| ATGGTAAACTACAGCTGAAT+TGG | - | chr1.1:3665134-3665153 | MS.gene24414:CDS | 35.0% | |
| ATTCAACCCTTCAAGATTTG+AGG | - | chr1.1:3665739-3665758 | MS.gene24414:CDS | 35.0% | |
| CATTCAAAGGCAATGGAAAT+GGG | + | chr1.1:3666534-3666553 | None:intergenic | 35.0% | |
| CCAAATACTTTCATGCCATT+TGG | - | chr1.1:3665864-3665883 | MS.gene24414:CDS | 35.0% | |
| CTTGAAGGGTTGAATTTATG+AGG | + | chr1.1:3665734-3665753 | None:intergenic | 35.0% | |
| GAAACTTCTCGAATGTGTAA+AGG | - | chr1.1:3664597-3664616 | MS.gene24414:CDS | 35.0% | |
| GGAAATAATTAGTGAGAGGA+AGG | - | chr1.1:3664393-3664412 | MS.gene24414:CDS | 35.0% | |
| GTATATAGTTGTCCACTCTA+AGG | + | chr1.1:3666239-3666258 | None:intergenic | 35.0% | |
| GTGATGTGTGGAACAATAAA+GGG | - | chr1.1:3664066-3664085 | MS.gene24414:intron | 35.0% | |
| TAAACTTGACGACCAAATGA+TGG | + | chr1.1:3665950-3665969 | None:intergenic | 35.0% | |
| TGCAAAAGATCAAAGATGGA+CGG | + | chr1.1:3664112-3664131 | None:intergenic | 35.0% | |
| TGTGATGTGTGGAACAATAA+AGG | - | chr1.1:3664065-3664084 | MS.gene24414:intron | 35.0% | |
| TTCTTGAATTGGAAAGGAGA+AGG | - | chr1.1:3664457-3664476 | MS.gene24414:intron | 35.0% | |
| ! | ATGGGATTTTGTAGGATAGA+GGG | + | chr1.1:3666747-3666766 | None:intergenic | 35.0% |
| ! | TATTTTCTTGGCGGTTTCTA+CGG | - | chr1.1:3664659-3664678 | MS.gene24414:intron | 35.0% |
| ! | TCTTTTCCAACTCAAATTCC+TGG | - | chr1.1:3664235-3664254 | MS.gene24414:intron | 35.0% |
| ! | TTTGGTATATAGGTTGGAAG+TGG | - | chr1.1:3666480-3666499 | MS.gene24414:intron | 35.0% |
| ! | TTTTATCATATGGTCCACCA+TGG | + | chr1.1:3665017-3665036 | None:intergenic | 35.0% |
| ! | TTTTGTTAAGTACCAGACCA+TGG | - | chr1.1:3664997-3665016 | MS.gene24414:intron | 35.0% |
| !! | AGCTGTTTCTTGAATTGGAA+AGG | - | chr1.1:3664451-3664470 | MS.gene24414:intron | 35.0% |
| !! | CCAAATGGCATGAAAGTATT+TGG | + | chr1.1:3665867-3665886 | None:intergenic | 35.0% |
| !! | TGAATCTTTTTCTAGCATGC+TGG | + | chr1.1:3666587-3666606 | None:intergenic | 35.0% |
| !!! | ATGTGTTGAGTTTTAAGGCA+TGG | - | chr1.1:3664856-3664875 | MS.gene24414:CDS | 35.0% |
| !!! | GCTTTTTTGTATTGTGTACC+AGG | + | chr1.1:3664256-3664275 | None:intergenic | 35.0% |
| !!! | GGCATGAAAGTATTTGGTTT+TGG | + | chr1.1:3665861-3665880 | None:intergenic | 35.0% |
| !!! | TGGAATTTTTCAGGTTGTGT+TGG | - | chr1.1:3665354-3665373 | MS.gene24414:intron | 35.0% |
| ACTCGACAGTAAAAACGAAG+AGG | + | chr1.1:3664786-3664805 | None:intergenic | 40.0% | |
| ATCAAATCTTGGGGTGATGA+TGG | - | chr1.1:3663735-3663754 | MS.gene24414:CDS | 40.0% | |
| ATCATCACCCCAAGATTTGA+TGG | + | chr1.1:3663736-3663755 | None:intergenic | 40.0% | |
| CAGGATTCCTAATCCCAAAA+GGG | - | chr1.1:3665651-3665670 | MS.gene24414:intron | 40.0% | |
| CCATTCAAAGGCAATGGAAA+TGG | + | chr1.1:3666535-3666554 | None:intergenic | 40.0% | |
| CCATTTCCATTGCCTTTGAA+TGG | - | chr1.1:3666532-3666551 | MS.gene24414:CDS | 40.0% | |
| CCTTTCCACCATCAAATCTT+GGG | - | chr1.1:3663725-3663744 | MS.gene24414:intron | 40.0% | |
| CTTTCCACCATCAAATCTTG+GGG | - | chr1.1:3663726-3663745 | MS.gene24414:intron | 40.0% | |
| GTAGCTGATGTAGAGTACAA+AGG | - | chr1.1:3665424-3665443 | MS.gene24414:intron | 40.0% | |
| GTTATGTGGAATGTGATGTG+TGG | - | chr1.1:3664054-3664073 | MS.gene24414:intron | 40.0% | |
| GTTTGAGGAAGCTTATTCAG+AGG | - | chr1.1:3663649-3663668 | MS.gene24414:intron | 40.0% | |
| TAAGCTTCCTCAAACGCAAA+TGG | + | chr1.1:3663644-3663663 | None:intergenic | 40.0% | |
| TATCCTACAAAATCCCATGC+AGG | - | chr1.1:3666749-3666768 | MS.gene24414:CDS | 40.0% | |
| TCACACTGTGGGATTCAATA+TGG | - | chr1.1:3666508-3666527 | MS.gene24414:CDS | 40.0% | |
| TCAGCTACTGCTTCTCTAAA+TGG | + | chr1.1:3665412-3665431 | None:intergenic | 40.0% | |
| TGAGCAGAAGACAATTCACA+TGG | - | chr1.1:3665105-3665124 | MS.gene24414:CDS | 40.0% | |
| TGGTGGAAAAACAAAGCACA+AGG | + | chr1.1:3663612-3663631 | None:intergenic | 40.0% | |
| TGTCGAGTCGTCAATCTAAT+TGG | - | chr1.1:3664798-3664817 | MS.gene24414:intron | 40.0% | |
| TGTGTACCAGGAATTTGAGT+TGG | + | chr1.1:3664244-3664263 | None:intergenic | 40.0% | |
| TTGAATTGGAAAGGAGAAGG+AGG | - | chr1.1:3664460-3664479 | MS.gene24414:intron | 40.0% | |
| ! | ACTTTCATGCCATTTGGTAG+TGG | - | chr1.1:3665870-3665889 | MS.gene24414:CDS | 40.0% |
| ! | CATGGGATTTTGTAGGATAG+AGG | + | chr1.1:3666748-3666767 | None:intergenic | 40.0% |
| ! | GTATATAGGTTGGAAGTGGT+AGG | - | chr1.1:3666484-3666503 | MS.gene24414:intron | 40.0% |
| ! | TGGGATTTTGTAGGATAGAG+GGG | + | chr1.1:3666746-3666765 | None:intergenic | 40.0% |
| ! | TGTGGTAATGCTTGCTTTGT+AGG | - | chr1.1:3665081-3665100 | MS.gene24414:intron | 40.0% |
| !! | CCAAGATTTGATGGTGGAAA+GGG | + | chr1.1:3663727-3663746 | None:intergenic | 40.0% |
| !! | TGAGGCTCTGGAAAAAATTC+AGG | + | chr1.1:3665716-3665735 | None:intergenic | 40.0% |
| !! | TTTTTGGCAATCTAGAGCCA+AGG | - | chr1.1:3664161-3664180 | MS.gene24414:intron | 40.0% |
| !!! | TGTGCTTTGTTTTTCCACCA+AGG | - | chr1.1:3663612-3663631 | MS.gene24414:intron | 40.0% |
| AACACAAAACGTGCAGCTTC+AGG | + | chr1.1:3663528-3663547 | None:intergenic | 45.0% | |
| AACGCAAATGGTACTCACCT+TGG | + | chr1.1:3663632-3663651 | None:intergenic | 45.0% | |
| AAGTGGTAGGATCACACTGT+GGG | - | chr1.1:3666497-3666516 | MS.gene24414:intron | 45.0% | |
| AATTGCGGCTGTAGTCACAT+TGG | - | chr1.1:3663859-3663878 | MS.gene24414:intron | 45.0% | |
| AGGGCTAAGGCTTCAATTTC+AGG | + | chr1.1:3663708-3663727 | None:intergenic | 45.0% | |
| ATCACCCCAAGATTTGATGG+TGG | + | chr1.1:3663733-3663752 | None:intergenic | 45.0% | |
| CAAGTTGCGAAGTGAATCGA+GGG | + | chr1.1:3663682-3663701 | None:intergenic | 45.0% | |
| CACAGCTACTGTCATGACAT+GGG | - | chr1.1:3664549-3664568 | MS.gene24414:CDS | 45.0% | |
| CCAGGATTCCTAATCCCAAA+AGG | - | chr1.1:3665650-3665669 | MS.gene24414:intron | 45.0% | |
| CCCTTTCCACCATCAAATCT+TGG | - | chr1.1:3663724-3663743 | MS.gene24414:intron | 45.0% | |
| GATTCCTAATCCCAAAAGGG+TGG | - | chr1.1:3665654-3665673 | MS.gene24414:intron | 45.0% | |
| GCATGTACTCCACTACCAAA+TGG | + | chr1.1:3665882-3665901 | None:intergenic | 45.0% | |
| GGGTTGAATTTATGAGGCTC+TGG | + | chr1.1:3665728-3665747 | None:intergenic | 45.0% | |
| GTGAAGGCAAGAGAGAAACT+TGG | - | chr1.1:3664358-3664377 | MS.gene24414:CDS | 45.0% | |
| GTGAGTACCATTTGCGTTTG+AGG | - | chr1.1:3663634-3663653 | MS.gene24414:intron | 45.0% | |
| TGTTAAGTACCAGACCATGG+TGG | - | chr1.1:3665000-3665019 | MS.gene24414:intron | 45.0% | |
| ! | CAATCTAGAGCCAAGGTTGA+GGG | - | chr1.1:3664168-3664187 | MS.gene24414:intron | 45.0% |
| ! | GCATTGCTTTCCACCCTTTT+GGG | + | chr1.1:3665667-3665686 | None:intergenic | 45.0% |
| ! | GGGATTTTGTAGGATAGAGG+GGG | + | chr1.1:3666745-3666764 | None:intergenic | 45.0% |
| ! | TGAAGCTGCACGTTTTGTGT+TGG | - | chr1.1:3663527-3663546 | MS.gene24414:CDS | 45.0% |
| !! | CCCAAGATTTGATGGTGGAA+AGG | + | chr1.1:3663728-3663747 | None:intergenic | 45.0% |
| !! | TTAGTGTCGGCATTTATGCG+CGG | - | chr1.1:3665251-3665270 | MS.gene24414:intron | 45.0% |
| !! | TTTAGCTCTTCCCTCAACCT+TGG | + | chr1.1:3664181-3664200 | None:intergenic | 45.0% |
| !! | TTTGATGGTGGAAAGGGCTA+AGG | + | chr1.1:3663721-3663740 | None:intergenic | 45.0% |
| !!! | CCTTTTGGGATTAGGAATCC+TGG | + | chr1.1:3665653-3665672 | None:intergenic | 45.0% |
| !!! | CTTTCCACCCTTTTGGGATT+AGG | + | chr1.1:3665661-3665680 | None:intergenic | 45.0% |
| AGCTTAGCAAGCTCATTGCC+AGG | + | chr1.1:3665909-3665928 | None:intergenic | 50.0% | |
| AGTGGAGTACATGCTTGTCC+TGG | - | chr1.1:3665888-3665907 | MS.gene24414:CDS | 50.0% | |
| ATTCTCTCCAACACCTGGCT+GGG | + | chr1.1:3666561-3666580 | None:intergenic | 50.0% | |
| CCAAGTTGCGAAGTGAATCG+AGG | + | chr1.1:3663683-3663702 | None:intergenic | 50.0% | |
| CCACAGCTACTGTCATGACA+TGG | - | chr1.1:3664548-3664567 | MS.gene24414:CDS | 50.0% | |
| CCATGTCATGACAGTAGCTG+TGG | + | chr1.1:3664551-3664570 | None:intergenic | 50.0% | |
| CCTCGATTCACTTCGCAACT+TGG | - | chr1.1:3663680-3663699 | MS.gene24414:intron | 50.0% | |
| GAAGTGGTAGGATCACACTG+TGG | - | chr1.1:3666496-3666515 | MS.gene24414:intron | 50.0% | |
| GCAAATGGTACTCACCTTGG+TGG | + | chr1.1:3663629-3663648 | None:intergenic | 50.0% | |
| GGGAGTCCATTCAAAGGCAA+TGG | + | chr1.1:3666541-3666560 | None:intergenic | 50.0% | |
| GGTAGATTCTCTCCAACACC+TGG | + | chr1.1:3666566-3666585 | None:intergenic | 50.0% | |
| TCATATGGTCCACCATGGTC+TGG | + | chr1.1:3665012-3665031 | None:intergenic | 50.0% | |
| TTTCTTGGCGGTTTCTACGG+TGG | - | chr1.1:3664662-3664681 | MS.gene24414:intron | 50.0% | |
| ! | ACGCCTGCATGGGATTTTGT+AGG | + | chr1.1:3666755-3666774 | None:intergenic | 50.0% |
| ! | GCAATCTAGAGCCAAGGTTG+AGG | - | chr1.1:3664167-3664186 | MS.gene24414:intron | 50.0% |
| ! | GGCATTGCTTTCCACCCTTT+TGG | + | chr1.1:3665668-3665687 | None:intergenic | 50.0% |
| !! | CTACGGTGGACTGCTTTGAT+AGG | - | chr1.1:3664676-3664695 | MS.gene24414:intron | 50.0% |
| !! | TGGAGTGCTTTTTGCTGCTC+AGG | - | chr1.1:3664522-3664541 | MS.gene24414:intron | 50.0% |
| !! | TGGCAATGAGCTTGCTAAGC+TGG | - | chr1.1:3665908-3665927 | MS.gene24414:CDS | 50.0% |
| CTGGCTGGGAGTCCATTCAA+AGG | + | chr1.1:3666547-3666566 | None:intergenic | 55.0% | |
| GATTCTCTCCAACACCTGGC+TGG | + | chr1.1:3666562-3666581 | None:intergenic | 55.0% | |
| ! | CTTTGAATGGACTCCCAGCC+AGG | - | chr1.1:3666545-3666564 | MS.gene24414:CDS | 55.0% |
| !! | CGGTGGACTGCTTTGATAGG+TGG | - | chr1.1:3664679-3664698 | MS.gene24414:intron | 55.0% |
| ATGGACTCCCAGCCAGGTGT+TGG | - | chr1.1:3666551-3666570 | MS.gene24414:CDS | 60.0% | |
| ! | GTGTCGGCATTTATGCGCGG+AGG | - | chr1.1:3665254-3665273 | MS.gene24414:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 3663513 | 3666780 | 3663513 | ID=MS.gene24414 |
| chr1.1 | mRNA | 3663513 | 3666780 | 3663513 | ID=MS.gene24414.t1;Parent=MS.gene24414 |
| chr1.1 | exon | 3666498 | 3666780 | 3666498 | ID=MS.gene24414.t1.exon1;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3666498 | 3666780 | 3666498 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3666011 | 3666117 | 3666011 | ID=MS.gene24414.t1.exon2;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3666011 | 3666117 | 3666011 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3665675 | 3665929 | 3665675 | ID=MS.gene24414.t1.exon3;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3665675 | 3665929 | 3665675 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3665104 | 3665190 | 3665104 | ID=MS.gene24414.t1.exon4;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3665104 | 3665190 | 3665104 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3664848 | 3664926 | 3664848 | ID=MS.gene24414.t1.exon5;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3664848 | 3664926 | 3664848 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3664533 | 3664639 | 3664533 | ID=MS.gene24414.t1.exon6;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3664533 | 3664639 | 3664533 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3664323 | 3664441 | 3664323 | ID=MS.gene24414.t1.exon7;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3664323 | 3664441 | 3664323 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3663727 | 3663801 | 3663727 | ID=MS.gene24414.t1.exon8;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3663727 | 3663801 | 3663727 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| chr1.1 | exon | 3663513 | 3663570 | 3663513 | ID=MS.gene24414.t1.exon9;Parent=MS.gene24414.t1 |
| chr1.1 | CDS | 3663513 | 3663570 | 3663513 | ID=cds.MS.gene24414.t1;Parent=MS.gene24414.t1 |
| Gene Sequence |
| Protein sequence |
