AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25416

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25416.t1 MTR_8g058965 57.204 465 168 7 12 453 4 460 4.62e-173 493
MS.gene25416.t1 MTR_8g469020 56.645 459 165 9 21 454 7 456 2.70e-167 479
MS.gene25416.t1 MTR_8g070950 59.130 460 161 11 1 454 1 439 1.97e-166 476
MS.gene25416.t1 MTR_8g062010 54.751 442 175 7 21 453 9 434 3.53e-152 439
MS.gene25416.t1 MTR_8g062080 52.838 458 192 8 5 453 7 449 2.52e-149 432
MS.gene25416.t1 MTR_8g062310 53.793 435 174 7 21 454 25 433 1.06e-145 423
MS.gene25416.t1 MTR_4g050250 53.176 425 164 7 1 395 1 420 2.42e-137 401
MS.gene25416.t1 MTR_8g062300 48.703 501 189 15 1 453 1 481 1.79e-133 394
MS.gene25416.t1 MTR_8g467790 48.731 394 154 10 21 403 148 504 2.24e-104 320
MS.gene25416.t1 MTR_2g083840 42.918 473 230 14 1 449 1 457 6.73e-102 311
MS.gene25416.t1 MTR_8g468810 41.841 478 234 17 1 449 1 463 4.07e-95 295
MS.gene25416.t1 MTR_8g014260 42.194 474 226 18 1 449 1 451 1.22e-92 288
MS.gene25416.t1 MTR_8g062270 42.257 452 223 13 21 448 16 453 1.38e-92 288
MS.gene25416.t1 MTR_8g058970 41.068 487 236 16 3 449 2 477 4.17e-88 277
MS.gene25416.t1 MTR_5g092960 40.343 466 241 10 9 448 7 461 9.12e-87 273
MS.gene25416.t1 MTR_8g467800 41.226 473 228 14 10 454 8 458 1.43e-84 267
MS.gene25416.t1 MTR_8g445780 42.446 417 198 16 1 402 1 390 7.48e-79 250
MS.gene25416.t1 MTR_8g468840 40.625 448 236 12 19 447 12 448 1.92e-78 251
MS.gene25416.t1 MTR_8g468760 40.347 461 207 16 12 448 2 418 6.43e-78 249
MS.gene25416.t1 MTR_4g032730 37.395 476 249 14 11 448 2 466 8.72e-77 247
MS.gene25416.t1 MTR_8g014160 39.597 447 190 16 21 449 41 425 2.69e-72 234
MS.gene25416.t1 MTR_8g468810 40.992 383 190 13 1 359 1 371 1.29e-68 223
MS.gene25416.t1 MTR_2g086020 74.658 146 37 0 309 454 175 320 8.88e-65 211
MS.gene25416.t1 MTR_2g086020 43.243 148 68 3 47 189 1 137 9.68e-23 99.0
MS.gene25416.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 9.65e-62 204
MS.gene25416.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 1.17e-61 204
MS.gene25416.t1 MTR_8g468810 43.750 304 143 10 1 285 1 295 1.67e-61 204
MS.gene25416.t1 MTR_5g092960 39.946 373 194 8 9 359 7 371 8.09e-60 201
MS.gene25416.t1 MTR_4g024710 40.836 311 137 11 165 449 58 347 6.05e-53 181
MS.gene25416.t1 MTR_8g467800 42.953 298 140 10 10 289 8 293 2.08e-46 164
MS.gene25416.t1 MTR_8g014210 43.096 239 108 10 225 449 7 231 5.69e-42 149
MS.gene25416.t1 MTR_4g024745 39.527 296 132 11 163 432 10 284 1.05e-40 147
MS.gene25416.t1 MTR_5g021550 50.000 160 72 5 7 164 9 162 3.63e-37 134
MS.gene25416.t1 MTR_8g077460 42.381 210 106 7 243 449 178 375 3.55e-36 137
MS.gene25416.t1 MTR_8g077460 39.004 241 126 10 1 234 1 227 2.19e-28 115
MS.gene25416.t1 MTR_7g115270 29.247 465 229 16 13 446 4 399 2.59e-33 130
MS.gene25416.t1 MTR_1g041245 29.864 442 231 17 21 449 11 386 3.37e-33 129
MS.gene25416.t1 MTR_7g098510 29.247 465 239 15 1 449 1 391 5.15e-33 129
MS.gene25416.t1 MTR_7g032380 28.795 448 216 16 12 449 2 356 1.72e-32 127
MS.gene25416.t1 MTR_8g014290 46.053 152 74 4 21 165 10 160 4.26e-31 117
MS.gene25416.t1 MTR_5g008950 28.027 446 221 18 23 449 1 365 7.16e-31 122
MS.gene25416.t1 MTR_5g084070 28.194 454 273 19 6 441 1 419 1.10e-29 120
MS.gene25416.t1 MTR_3g108150 30.365 438 231 16 21 448 13 386 1.53e-29 119
MS.gene25416.t1 MTR_7g056433 28.702 439 242 13 21 449 12 389 1.92e-29 119
MS.gene25416.t1 MTR_4g024720 40.984 183 82 6 1 164 1 176 7.47e-28 110
MS.gene25416.t1 MTR_3g099800 64.368 87 30 1 361 446 19 105 1.12e-27 106
MS.gene25416.t1 MTR_7g026500 29.345 443 236 19 21 448 14 394 4.49e-26 109
MS.gene25416.t1 MTR_7g033915 27.964 447 210 17 21 448 11 364 4.83e-26 108
MS.gene25416.t1 MTR_3g107120 28.188 447 241 18 21 450 9 392 7.22e-26 109
MS.gene25416.t1 MTR_5g080710 28.211 436 276 16 21 441 33 446 1.02e-25 109
MS.gene25416.t1 MTR_7g007080 28.894 443 237 19 21 450 4 381 6.18e-25 106
MS.gene25416.t1 MTR_3g107160 28.474 439 239 20 21 449 10 383 5.77e-24 103
MS.gene25416.t1 MTR_7g032370 27.610 431 218 18 33 449 2 352 6.90e-24 102
MS.gene25416.t1 MTR_3g023630 27.333 450 224 20 20 449 7 373 8.00e-23 100
MS.gene25416.t1 MTR_2g007450 27.912 455 246 20 21 446 16 417 4.82e-22 98.2
MS.gene25416.t1 MTR_7g098480 25.813 461 256 14 1 448 1 388 7.35e-22 98.2
MS.gene25416.t1 MTR_4g098590 29.371 429 226 20 23 432 1 371 2.29e-21 95.9
MS.gene25416.t1 MTR_3g107100 25.934 455 244 19 21 449 11 398 4.28e-21 95.5
MS.gene25416.t1 MTR_6g022500 27.314 443 241 15 21 449 101 476 6.62e-21 95.5
MS.gene25416.t1 MTR_1g108820 29.630 432 242 18 21 446 8 383 1.07e-20 94.0
MS.gene25416.t1 MTR_1089s0010 26.116 448 236 20 21 449 8 379 2.00e-20 93.2
MS.gene25416.t1 MTR_7g088260 26.991 452 253 19 8 449 78 462 2.32e-20 93.6
MS.gene25416.t1 MTR_5g058100 27.815 453 238 18 14 448 2 383 1.09e-19 90.9
MS.gene25416.t1 MTR_8g014230 51.190 84 39 2 359 442 17 98 1.16e-19 84.3
MS.gene25416.t1 MTR_2g008310 25.113 442 250 16 21 451 2 373 1.42e-19 90.9
MS.gene25416.t1 MTR_3g036250 25.799 438 236 15 20 446 4 363 1.86e-19 90.1
MS.gene25416.t1 MTR_6g011460 26.304 460 264 14 1 449 26 421 8.99e-19 88.6
MS.gene25416.t1 MTR_3g105060 28.341 434 232 19 21 449 14 373 1.24e-18 87.8
MS.gene25416.t1 MTR_7g056287 25.285 439 251 15 19 448 1 371 2.86e-18 86.7
MS.gene25416.t1 MTR_7g056447 35.052 194 107 6 20 209 8 186 3.01e-18 85.5
MS.gene25416.t1 MTR_1g085120 26.923 442 252 17 19 449 165 546 7.02e-18 86.7
MS.gene25416.t1 MTR_1g085120 26.923 442 252 17 19 449 90 471 7.23e-18 86.3
MS.gene25416.t1 MTR_5g008920 32.536 209 117 9 23 227 14 202 9.25e-18 85.1
MS.gene25416.t1 MTR_3g071850 27.981 411 223 16 21 416 24 376 1.11e-17 86.3
MS.gene25416.t1 MTR_8g085430 32.850 207 105 9 21 211 11 199 3.09e-17 82.8
MS.gene25416.t1 MTR_4g080590 26.201 458 286 17 4 437 6 435 4.19e-17 83.6
MS.gene25416.t1 MTR_7g056420 26.559 433 226 14 21 443 9 359 1.92e-16 82.8
MS.gene25416.t1 MTR_3g087260 27.536 483 265 20 17 448 8 456 2.35e-16 81.3
MS.gene25416.t1 MTR_2g008320 24.945 453 243 19 21 451 52 429 3.64e-16 80.9
MS.gene25416.t1 MTR_3g082890 26.809 470 258 23 21 449 17 441 4.64e-16 80.5
MS.gene25416.t1 MTR_2g007500 28.316 392 195 19 21 396 14 335 4.97e-16 79.3
MS.gene25416.t1 MTR_7g055943 25.330 454 242 18 21 449 40 421 6.23e-16 80.1
MS.gene25416.t1 MTR_1g053025 26.067 445 250 18 21 446 2 386 6.80e-16 79.7
MS.gene25416.t1 MTR_1g038710 26.374 455 272 16 21 437 19 448 1.55e-15 79.0
MS.gene25416.t1 MTR_5g073420 30.357 224 132 12 11 225 2 210 3.37e-15 77.4
MS.gene25416.t1 MTR_4g024770 56.522 69 25 2 1 69 8 71 4.32e-15 70.5
MS.gene25416.t1 MTR_7g033990 33.745 243 123 11 21 243 11 235 4.90e-15 77.0
MS.gene25416.t1 MTR_7g034110 33.493 209 105 9 21 214 11 200 1.53e-14 75.1
MS.gene25416.t1 MTR_3g040700 30.288 208 120 8 10 208 32 223 2.04e-14 75.5
MS.gene25416.t1 MTR_5g061680 31.140 228 129 13 11 225 2 214 2.32e-14 74.3
MS.gene25416.t1 MTR_7g075820 26.250 400 213 15 21 366 6 377 4.03e-14 74.3
MS.gene25416.t1 MTR_7g034115 34.314 204 109 9 17 212 7 193 4.79e-14 73.9
MS.gene25416.t1 MTR_4g056030 26.304 441 252 16 21 421 9 416 9.90e-14 73.6
MS.gene25416.t1 MTR_7g034090 29.148 223 127 7 21 213 4 225 1.13e-13 73.2
MS.gene25416.t1 MTR_5g039970 30.769 208 132 5 4 208 2 200 1.67e-13 71.6
MS.gene25416.t1 MTR_4g056040 34.298 242 103 12 21 219 9 237 4.23e-13 71.6
MS.gene25416.t1 MTR_3g115430 37.209 129 72 5 322 449 5 125 4.71e-13 66.2
MS.gene25416.t1 MTR_7g060470 24.821 419 248 16 19 423 1 366 6.93e-13 70.5
MS.gene25416.t1 MTR_7g098570 28.910 211 134 4 4 211 3 200 1.07e-12 70.1
MS.gene25416.t1 MTR_7g098570 34.074 135 79 2 317 444 257 388 4.37e-11 65.1
MS.gene25416.t1 MTR_3g467400 29.126 206 120 8 19 208 1 196 2.10e-12 68.9
MS.gene25416.t1 MTR_5g039950 26.267 434 247 20 4 416 6 387 3.00e-12 68.6
MS.gene25416.t1 MTR_4g080590 30.769 208 128 6 4 208 6 200 4.27e-12 67.8
MS.gene25416.t1 MTR_7g033940 41.414 99 46 4 14 111 89 176 1.27e-11 64.7
MS.gene25416.t1 MTR_7g033945 34.239 184 83 9 21 189 11 171 1.48e-11 63.5
MS.gene25416.t1 MTR_7g056277 29.464 224 131 9 4 219 246 450 1.82e-11 66.6
MS.gene25416.t1 MTR_5g012840 43.243 111 58 4 340 449 212 318 2.13e-11 65.1
MS.gene25416.t1 MTR_2g007400 30.144 209 128 8 19 215 10 212 3.12e-11 65.5
MS.gene25416.t1 MTR_3g048290 30.093 216 135 7 4 213 6 211 4.46e-11 65.1
MS.gene25416.t1 MTR_1g492880 50.000 66 22 3 11 72 2 60 4.95e-11 60.1
MS.gene25416.t1 MTR_1g492880 50.000 66 22 3 11 72 2 60 5.84e-11 59.3
MS.gene25416.t1 MTR_4g134150 30.612 196 103 8 21 208 14 184 7.82e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25416.t1 AT1G06630 31.161 353 220 10 21 359 12 355 2.89e-28 115
MS.gene25416.t1 AT1G06630 31.161 353 220 10 21 359 12 355 2.89e-28 115
MS.gene25416.t1 AT1G78750 29.167 480 281 20 1 446 1 455 3.38e-28 116
MS.gene25416.t1 AT1G78750 29.167 480 281 20 1 446 1 455 3.38e-28 116
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 12 352 4.77e-28 115
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 12 352 4.77e-28 115
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 12 352 4.77e-28 115
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 12 352 4.77e-28 115
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 21 361 7.12e-28 115
MS.gene25416.t1 AT1G06630 32.867 286 175 8 21 293 12 293 1.10e-27 112
MS.gene25416.t1 AT1G06630 31.143 350 218 10 21 356 12 352 1.70e-27 114
MS.gene25416.t1 AT5G56420 27.313 454 268 16 21 449 6 422 5.24e-25 107
MS.gene25416.t1 AT5G56420 27.313 454 268 16 21 449 6 422 5.24e-25 107
MS.gene25416.t1 AT5G56420 27.313 454 268 16 21 449 6 422 5.24e-25 107
MS.gene25416.t1 AT2G26030 27.214 463 277 18 21 446 4 443 3.21e-24 105
MS.gene25416.t1 AT3G58920 27.345 501 258 20 21 449 2 468 1.42e-23 103
MS.gene25416.t1 AT2G26030 27.332 461 274 18 21 446 4 438 1.60e-23 102
MS.gene25416.t1 AT2G26030 27.332 461 274 18 21 446 4 438 1.60e-23 102
MS.gene25416.t1 AT4G10400 27.477 444 269 17 21 448 2 408 1.03e-22 100
MS.gene25416.t1 AT4G10400 27.477 444 269 17 21 448 2 408 1.03e-22 100
MS.gene25416.t1 AT4G10400 27.477 444 269 17 21 448 2 408 1.03e-22 100
MS.gene25416.t1 AT4G26340 27.494 451 272 14 21 449 2 419 1.34e-22 100
MS.gene25416.t1 AT5G53840 27.234 470 265 19 9 446 13 437 5.74e-22 98.2
MS.gene25416.t1 AT4G14103 34.234 222 127 7 21 234 8 218 7.19e-22 98.2
MS.gene25416.t1 AT4G14103 33.784 222 128 7 21 234 8 218 8.48e-22 97.1
MS.gene25416.t1 AT4G14103 33.784 222 128 7 21 234 8 218 8.48e-22 97.1
MS.gene25416.t1 AT4G14096 32.609 276 141 12 21 272 8 262 8.92e-22 98.2
MS.gene25416.t1 AT4G14096 32.609 276 141 12 21 272 8 262 8.92e-22 98.2
MS.gene25416.t1 AT1G32375 27.586 464 258 21 21 449 2 422 3.70e-21 95.9
MS.gene25416.t1 AT1G32375 27.586 464 258 21 21 449 2 422 3.70e-21 95.9
MS.gene25416.t1 AT1G66310 26.471 476 283 19 1 446 1 439 5.13e-21 95.5
MS.gene25416.t1 AT5G56400 25.880 483 281 18 1 449 16 455 5.85e-21 95.5
MS.gene25416.t1 AT5G56560 26.802 444 276 17 23 449 7 418 6.95e-21 94.7
MS.gene25416.t1 AT5G22720 26.556 482 268 22 21 452 23 468 7.00e-21 95.5
MS.gene25416.t1 AT3G59200 33.500 200 116 6 16 208 2 191 1.33e-20 93.6
MS.gene25416.t1 AT3G50710 27.511 458 271 16 21 449 2 427 1.63e-20 94.0
MS.gene25416.t1 AT3G59200 33.500 200 116 6 16 208 2 191 1.80e-20 94.4
MS.gene25416.t1 AT3G59230 33.663 202 110 7 21 208 12 203 3.09e-20 93.6
MS.gene25416.t1 AT5G56370 26.201 458 269 19 21 448 2 420 6.87e-20 92.0
MS.gene25416.t1 AT5G56370 26.201 458 269 19 21 448 2 420 6.87e-20 92.0
MS.gene25416.t1 AT1G16930 35.577 208 93 9 20 212 14 195 4.04e-19 89.7
MS.gene25416.t1 AT1G16930 35.577 208 93 9 20 212 14 195 4.04e-19 89.7
MS.gene25416.t1 AT1G16930 35.577 208 93 9 20 212 14 195 4.04e-19 89.7
MS.gene25416.t1 AT5G60610 26.877 413 251 16 21 413 2 383 5.91e-19 89.0
MS.gene25416.t1 AT5G60610 26.877 413 251 16 21 413 2 383 5.91e-19 89.0
MS.gene25416.t1 AT3G59210 36.453 203 104 7 21 212 7 195 1.03e-18 89.0
MS.gene25416.t1 AT3G59210 36.453 203 104 7 21 212 7 195 1.03e-18 89.0
MS.gene25416.t1 AT3G59210 36.453 203 104 7 21 212 7 195 1.03e-18 89.0
MS.gene25416.t1 AT3G59210 36.453 203 104 7 21 212 7 195 1.03e-18 89.0
MS.gene25416.t1 AT3G59210 36.453 203 104 7 21 212 7 195 1.03e-18 89.0
MS.gene25416.t1 AT1G51370 27.333 450 263 19 21 444 19 430 1.46e-18 88.2
MS.gene25416.t1 AT5G44950 26.682 431 265 14 21 422 4 412 1.56e-18 88.2
MS.gene25416.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.67e-18 86.7
MS.gene25416.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.67e-18 86.7
MS.gene25416.t1 AT4G09920 34.375 192 109 7 21 208 2 180 2.31e-18 85.5
MS.gene25416.t1 AT4G09920 34.375 192 109 7 21 208 2 180 2.31e-18 85.5
MS.gene25416.t1 AT4G09920 34.375 192 109 7 21 208 2 180 2.31e-18 85.5
MS.gene25416.t1 AT3G59170 33.054 239 123 9 16 223 2 234 2.37e-18 87.8
MS.gene25416.t1 AT5G56820 27.137 468 252 20 15 446 9 423 2.72e-18 87.4
MS.gene25416.t1 AT1G69630 31.878 229 129 9 1 223 1 208 6.93e-18 86.3
MS.gene25416.t1 AT5G22610 24.222 450 300 13 17 450 14 438 8.41e-18 85.9
MS.gene25416.t1 AT5G56440 29.730 481 232 23 21 448 2 429 1.01e-17 85.5
MS.gene25416.t1 AT4G13965 26.596 470 260 21 12 446 1 420 3.17e-17 84.0
MS.gene25416.t1 AT5G56810 28.698 453 270 17 16 446 10 431 3.20e-17 84.0
MS.gene25416.t1 AT3G44060 25.702 463 262 13 26 448 4 424 4.92e-17 83.6
MS.gene25416.t1 AT1G58310 31.304 230 116 9 21 223 8 222 5.58e-17 83.6
MS.gene25416.t1 AT5G41830 31.500 200 119 7 21 208 13 206 6.43e-17 83.6
MS.gene25416.t1 AT3G59160 27.160 324 169 12 21 296 13 317 1.12e-16 82.4
MS.gene25416.t1 AT3G03040 29.845 258 141 10 21 250 2 247 1.40e-16 82.4
MS.gene25416.t1 AT5G50270 26.966 445 247 16 21 428 2 405 1.48e-16 81.6
MS.gene25416.t1 AT5G56380 27.273 473 265 20 21 449 2 439 1.63e-16 82.0
MS.gene25416.t1 AT5G56380 27.273 473 265 20 21 449 2 439 1.63e-16 82.0
MS.gene25416.t1 AT4G00320 32.178 202 115 9 21 208 13 206 1.76e-16 82.0
MS.gene25416.t1 AT4G00160 37.245 196 108 7 17 208 11 195 1.95e-16 81.6
MS.gene25416.t1 AT5G41840 30.288 208 118 9 18 208 11 208 2.01e-16 82.0
MS.gene25416.t1 AT4G13985 24.109 477 310 15 1 446 1 456 2.62e-16 81.3
MS.gene25416.t1 AT5G18780 27.033 455 276 19 21 446 11 438 2.85e-16 81.3
MS.gene25416.t1 AT5G18780 27.033 455 276 19 21 446 11 438 2.85e-16 81.3
MS.gene25416.t1 AT3G44810 32.512 203 113 7 23 213 9 199 5.34e-16 80.5
MS.gene25416.t1 AT5G38390 33.854 192 103 7 21 208 2 173 7.03e-16 80.1
MS.gene25416.t1 AT3G26922 30.952 210 120 8 8 210 1 192 1.02e-15 78.2
MS.gene25416.t1 AT3G26922 30.952 210 120 8 8 210 1 192 1.02e-15 78.2
MS.gene25416.t1 AT3G60040 29.286 280 162 11 21 272 13 284 1.36e-15 79.7
MS.gene25416.t1 AT3G58820 32.278 158 90 5 21 170 2 150 1.96e-15 78.6
MS.gene25416.t1 AT5G38396 28.270 237 144 8 21 241 2 228 2.29e-15 78.6
MS.gene25416.t1 AT4G13960 32.308 195 113 6 21 208 2 184 3.78e-15 77.8
MS.gene25416.t1 AT4G13960 32.308 195 113 6 21 208 2 184 3.78e-15 77.8
MS.gene25416.t1 AT3G59240 29.703 202 123 6 15 208 2 192 4.07e-15 77.8
MS.gene25416.t1 AT3G60040 29.286 280 162 11 21 272 233 504 4.14e-15 78.6
MS.gene25416.t1 AT5G56690 31.980 197 118 7 23 213 4 190 4.30e-15 77.4
MS.gene25416.t1 AT3G60040 29.286 280 162 11 21 272 232 503 4.48e-15 78.2
MS.gene25416.t1 AT3G49030 27.155 464 268 21 16 448 16 440 4.97e-15 77.4
MS.gene25416.t1 AT2G42720 34.536 194 114 7 21 208 2 188 5.59e-15 77.0
MS.gene25416.t1 AT3G60040 29.286 280 162 11 21 272 230 501 5.86e-15 77.8
MS.gene25416.t1 AT3G60040 31.364 220 131 7 21 224 232 447 6.08e-15 77.8
MS.gene25416.t1 AT3G59190 29.000 200 118 6 21 208 12 199 7.36e-15 76.6
MS.gene25416.t1 AT3G59190 29.000 200 118 6 21 208 12 199 1.09e-14 76.6
MS.gene25416.t1 AT3G03030 30.348 201 115 8 21 208 2 190 1.25e-14 75.1
MS.gene25416.t1 AT1G64540 28.826 281 137 13 21 272 5 251 1.58e-14 75.9
MS.gene25416.t1 AT1G64540 28.826 281 137 13 21 272 5 251 1.58e-14 75.9
MS.gene25416.t1 AT3G03030 29.851 201 116 7 21 208 2 190 1.79e-14 75.9
MS.gene25416.t1 AT3G49150 31.754 211 119 10 21 222 16 210 2.13e-14 75.5
MS.gene25416.t1 AT1G48400 32.143 196 113 8 21 208 10 193 2.28e-14 75.5
MS.gene25416.t1 AT1G48400 32.143 196 113 8 21 208 10 193 2.47e-14 75.5
MS.gene25416.t1 AT5G56370 29.368 269 152 11 21 272 2 249 3.38e-14 73.9
MS.gene25416.t1 AT3G59000 31.492 181 105 6 21 192 2 172 6.90e-14 73.9
MS.gene25416.t1 AT5G38392 29.851 201 122 7 21 210 2 194 7.72e-14 70.9
MS.gene25416.t1 AT4G15060 31.963 219 133 8 1 213 4 212 1.14e-13 73.2
MS.gene25416.t1 AT5G18770 26.124 467 288 19 21 454 24 466 1.89e-13 72.8
MS.gene25416.t1 AT5G44960 26.316 418 245 16 21 414 5 383 2.07e-13 72.4
MS.gene25416.t1 AT4G15060 32.487 197 119 7 21 213 172 358 2.24e-13 72.4
MS.gene25416.t1 AT4G22280 26.562 448 274 17 21 448 2 414 3.38e-13 71.6
MS.gene25416.t1 AT1G55030 25.467 428 244 19 15 412 13 395 3.63e-13 71.6
MS.gene25416.t1 AT1G55030 25.467 428 244 19 15 412 3 385 3.70e-13 71.6
MS.gene25416.t1 AT3G26930 26.337 486 244 18 21 452 21 446 4.27e-13 71.2
MS.gene25416.t1 AT3G59150 33.516 182 97 8 20 192 12 178 5.04e-13 71.2
MS.gene25416.t1 AT3G49030 25.813 461 252 21 16 448 16 414 5.88e-13 70.9
MS.gene25416.t1 AT5G18780 31.795 195 114 8 21 212 11 189 1.00e-12 69.7
MS.gene25416.t1 AT5G18780 31.795 195 114 8 21 212 11 189 1.00e-12 69.7
MS.gene25416.t1 AT1G13780 27.563 439 249 24 21 416 10 422 2.53e-12 68.9
MS.gene25416.t1 AT1G60400 25.474 369 211 13 21 356 14 351 2.81e-12 68.6
MS.gene25416.t1 AT5G53635 25.370 473 259 19 22 448 1 425 3.48e-12 68.6
MS.gene25416.t1 AT2G26030 26.247 381 230 15 101 446 1 365 4.89e-12 67.8
MS.gene25416.t1 AT1G51370 30.412 194 106 7 21 208 19 189 4.99e-12 67.4
MS.gene25416.t1 AT3G62440 27.830 212 120 5 21 212 2 200 8.05e-12 67.4
MS.gene25416.t1 AT1G56610 33.854 192 103 9 26 208 15 191 9.54e-12 67.4
MS.gene25416.t1 AT4G22280 27.042 355 215 13 21 356 2 331 1.00e-11 66.6
MS.gene25416.t1 AT1G13570 30.204 245 122 13 21 252 6 214 1.44e-11 66.6
MS.gene25416.t1 AT1G13570 30.204 245 122 13 21 252 6 214 1.44e-11 66.6
MS.gene25416.t1 AT5G38570 25.390 449 239 14 21 448 2 375 1.45e-11 66.2
MS.gene25416.t1 AT5G35995 30.769 195 110 8 21 208 5 181 1.63e-11 66.6
MS.gene25416.t1 AT5G35995 30.769 195 110 8 21 208 5 181 1.63e-11 66.6
MS.gene25416.t1 AT3G59000 33.858 127 68 4 21 140 2 119 1.83e-11 65.9
MS.gene25416.t1 AT1G13570 31.481 216 107 11 21 223 6 193 2.19e-11 65.1
MS.gene25416.t1 AT1G56610 33.854 192 103 9 26 208 78 254 2.22e-11 66.2
MS.gene25416.t1 AT5G56410 29.612 206 114 8 28 213 10 204 2.26e-11 66.2
MS.gene25416.t1 AT5G56560 29.381 194 119 5 23 213 7 185 5.78e-11 65.1
MS.gene25416.t1 AT3G26922 30.460 174 97 7 44 210 7 163 6.10e-11 63.5
MS.gene25416.t1 AT3G26922 30.460 174 97 7 44 210 7 163 6.10e-11 63.5

Find 103 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCGATGATGACATGTTTC+TGG 0.230507 8.2:-40462630 MS.gene25416:CDS
AGTCCAAGTGAAATTGTTAT+TGG 0.238664 8.2:+40461254 None:intergenic
AGGTGAGATTCAAGACATTT+TGG 0.257822 8.2:+40460638 None:intergenic
GATTGTTGATACGGAGGTTT+TGG 0.266033 8.2:+40462841 None:intergenic
GAAACTCCACCATGTCCTTT+TGG 0.274770 8.2:-40461394 MS.gene25416:CDS
CTTCATATATATCTCTATTT+CGG 0.288772 8.2:+40461091 None:intergenic
TGATGTAAATTGCAAAATTC+TGG 0.292545 8.2:+40460900 None:intergenic
CTCGCCGCTGGCGCCATCTC+TGG 0.310072 8.2:-40462808 MS.gene25416:CDS
TGTGGCTCCCATGTTCTTAA+AGG 0.320804 8.2:+40460674 None:intergenic
TTGGTAAATTTCAAACTCTT+GGG 0.324937 8.2:+40461273 None:intergenic
ATTGGTAAATTTCAAACTCT+TGG 0.326362 8.2:+40461272 None:intergenic
ATGTGGCTCAATGCTGTTAA+TGG 0.338769 8.2:-40462593 MS.gene25416:CDS
TCTCATAATTCAGAGCAATA+AGG 0.346493 8.2:-40460802 MS.gene25416:intron
TCAATTGTTGCCCTTCTCTC+TGG 0.354482 8.2:-40461369 MS.gene25416:CDS
AATTCCTATGTCGGGATAAC+AGG 0.364711 8.2:+40461215 None:intergenic
TTCGGAGGTTGTAGAGAATA+GGG 0.393492 8.2:+40461109 None:intergenic
TCTCTCTCGTTTCTCGCCGC+TGG 0.398888 8.2:-40462820 MS.gene25416:CDS
CTGACTTATGTTCACATAGA+AGG 0.406124 8.2:-40460617 MS.gene25416:CDS
TTTCGGAGGTTGTAGAGAAT+AGG 0.420592 8.2:+40461108 None:intergenic
GAGCAGTTGAAGAGTGAAGA+AGG 0.423600 8.2:+40462506 None:intergenic
TGACGGTGCAATCTATTTGA+AGG 0.429149 8.2:-40461457 MS.gene25416:CDS
CGGGTGTTCGCAGTAACAAT+TGG 0.430664 8.2:+40462748 None:intergenic
TTGAAACACTGCAGTCTTGA+CGG 0.431575 8.2:-40461474 MS.gene25416:intron
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8.2:+40460680 None:intergenic
TGGCTAATTGCATTGATATG+TGG 0.457305 8.2:-40462610 MS.gene25416:CDS
GACGCAGCCGTGTCTCCTTA+AGG 0.460023 8.2:-40460419 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.467913 8.2:+40460817 None:intergenic
GTTCACATAGAAGGATATCA+AGG 0.472172 8.2:-40460608 MS.gene25416:CDS
CAACAAATTTACTTTCAGAT+GGG 0.478832 8.2:+40461133 None:intergenic
TCAACAAATTTACTTTCAGA+TGG 0.480545 8.2:+40461132 None:intergenic
TGAAGAGTGAAGAAGGGAAG+AGG 0.485772 8.2:+40462513 None:intergenic
AGCAGTTGAAGAGTGAAGAA+GGG 0.486031 8.2:+40462507 None:intergenic
GCTCCAACCTCGTCTCTCTC+AGG 0.490628 8.2:-40462487 MS.gene25416:intron
GCCAATGTAATTCCTATGTC+GGG 0.493069 8.2:+40461207 None:intergenic
GGGCAACAATTGAGTCCAAA+AGG 0.494834 8.2:+40461379 None:intergenic
CATGGGGCAGCCAGAGAGAA+GGG 0.495273 8.2:+40461359 None:intergenic
CTTCTATGTGAACATAAGTC+AGG 0.496958 8.2:+40460618 None:intergenic
AACGAGAGAGATTGTTGATA+CGG 0.510527 8.2:+40462832 None:intergenic
AACAAATTTACTTTCAGATG+GGG 0.514411 8.2:+40461134 None:intergenic
CAAAAGATTCGAGTTAAAGC+GGG 0.517956 8.2:+40460860 None:intergenic
TTCGAATGTGACGGGATTCG+CGG 0.522786 8.2:+40462675 None:intergenic
GCATGGGGCAGCCAGAGAGA+AGG 0.524254 8.2:+40461358 None:intergenic
ATTGAAGATGCTTCCAGAGA+TGG 0.526620 8.2:+40462795 None:intergenic
TGGTAAATTTCAAACTCTTG+GGG 0.526740 8.2:+40461274 None:intergenic
ACGCAGCTTTCGAATGTGAC+GGG 0.529221 8.2:+40462667 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8.2:-40460591 MS.gene25416:CDS
TTACCAATAACAATTTCACT+TGG 0.535050 8.2:-40461257 MS.gene25416:CDS
GAACAAAACGACGTCGTCAT+CGG 0.535611 8.2:-40462923 MS.gene25416:CDS
ATATCAAAAGTTTCGAGCAT+GGG 0.539933 8.2:+40461342 None:intergenic
CATATATATCTCTATTTCGG+AGG 0.541568 8.2:+40461094 None:intergenic
GCAAAAGATTCGAGTTAAAG+CGG 0.546885 8.2:+40460859 None:intergenic
GGCCAATGTAATTCCTATGT+CGG 0.551371 8.2:+40461206 None:intergenic
AACCATCACCTTTAAGAACA+TGG 0.553947 8.2:-40460682 MS.gene25416:CDS
CGAAAGCTGCGTCTCAAATG+TGG 0.557588 8.2:-40462656 MS.gene25416:CDS
GTAACAATTGGAGTCGGAGT+CGG 0.559467 8.2:+40462760 None:intergenic
TTTGGAACTGTTGTTGACTG+TGG 0.559593 8.2:+40460656 None:intergenic
ATGTGGCAGAGTATAGAGTC+TGG 0.559921 8.2:+40462881 None:intergenic
AGTTTCAGCATCTTCAGTGA+TGG 0.564437 8.2:+40461411 None:intergenic
GCTTCCAGAGATGGCGCCAG+CGG 0.565504 8.2:+40462804 None:intergenic
GGGAGGTGGTGGTACACCAT+CGG 0.567550 8.2:+40461296 None:intergenic
GACAGAGCCCCTTGGTACAT+CGG 0.570357 8.2:+40460460 None:intergenic
GGATTCGCGGAGGGCGAAGA+CGG 0.571335 8.2:+40462688 None:intergenic
AGCCAGAAACATGTCATCAT+CGG 0.573062 8.2:+40462628 None:intergenic
GGTAAATTTCAAACTCTTGG+GGG 0.573188 8.2:+40461275 None:intergenic
GAGAGACAAATCTACAAGGT+GGG 0.576378 8.2:+40462568 None:intergenic
AAGATTAGCCGATGTACCAA+GGG 0.582750 8.2:-40460468 MS.gene25416:CDS
ATACCTGAGAGAGACGAGGT+TGG 0.584623 8.2:+40462484 None:intergenic
CCACACTCTGCAAGTTGTCA+AGG 0.585979 8.2:+40461181 None:intergenic
AATATCAAAAGTTTCGAGCA+TGG 0.586764 8.2:+40461341 None:intergenic
TTCTGGATGATTTAAAACTG+CGG 0.592985 8.2:+40460917 None:intergenic
GGTGTTGACGAAGGATGCAA+AGG 0.595972 8.2:+40462709 None:intergenic
GAATGTGACGGGATTCGCGG+AGG 0.597017 8.2:+40462678 None:intergenic
ACCATCACCTTTAAGAACAT+GGG 0.597069 8.2:-40460681 MS.gene25416:CDS
GACGCAGCTTTCGAATGTGA+CGG 0.598226 8.2:+40462666 None:intergenic
GCAGAGTATAGAGTCTGGTA+AGG 0.599401 8.2:+40462886 None:intergenic
TTGCATGTGACAGAGCCCCT+TGG 0.600815 8.2:+40460452 None:intergenic
AAAGATTAGCCGATGTACCA+AGG 0.604504 8.2:-40460469 MS.gene25416:CDS
CGGTGAGAGACAAATCTACA+AGG 0.605981 8.2:+40462564 None:intergenic
TCCCGACATAGGAATTACAT+TGG 0.608308 8.2:-40461208 MS.gene25416:CDS
GTAAATTTCAAACTCTTGGG+GGG 0.608751 8.2:+40461276 None:intergenic
CAATTGAGTCCAAAAGGACA+TGG 0.611473 8.2:+40461385 None:intergenic
AGAGACAAATCTACAAGGTG+GGG 0.613306 8.2:+40462569 None:intergenic
GAGAGAGATTGTTGATACGG+AGG 0.615530 8.2:+40462835 None:intergenic
AATGTGACGGGATTCGCGGA+GGG 0.616275 8.2:+40462679 None:intergenic
GACTCCTGTTATCCCGACAT+AGG 0.616754 8.2:-40461219 MS.gene25416:CDS
GGCGAAGACGGTGTTGACGA+AGG 0.622034 8.2:+40462700 None:intergenic
TATCAAAAGTTTCGAGCATG+GGG 0.622663 8.2:+40461343 None:intergenic
TTCGCAGTAACAATTGGAGT+CGG 0.623591 8.2:+40462754 None:intergenic
GCTGCGTCATTCGACATCAA+AGG 0.623855 8.2:-40461049 MS.gene25416:intron
CCTTGACAACTTGCAGAGTG+TGG 0.631925 8.2:-40461181 MS.gene25416:CDS
TTGAGAGGAATGAAAGGATG+TGG 0.635310 8.2:+40462864 None:intergenic
TTTAAAACTGCGGTGTGAGG+TGG 0.655264 8.2:+40460927 None:intergenic
TGATTTAAAACTGCGGTGTG+AGG 0.659188 8.2:+40460924 None:intergenic
TACACCATCGGTAAAAGATG+TGG 0.661373 8.2:+40461308 None:intergenic
ACTCTGCAAGTTGTCAAGGA+CGG 0.665011 8.2:+40461185 None:intergenic
TGACAACTTGCAGAGTGTGG+TGG 0.668035 8.2:-40461178 MS.gene25416:CDS
AAGAAAGAGAAACATTTATG+CGG 0.668329 8.2:-40461071 MS.gene25416:CDS
TGAGAGACAAATCTACAAGG+TGG 0.672928 8.2:+40462567 None:intergenic
GTTTGCACCTTAAGGAGACA+CGG 0.678298 8.2:+40460412 None:intergenic
TTGAGTCCAAAAGGACATGG+TGG 0.681011 8.2:+40461388 None:intergenic
AAAAGATTCGAGTTAAAGCG+GGG 0.719530 8.2:+40460861 None:intergenic
AGATTAGCCGATGTACCAAG+GGG 0.736672 8.2:-40460467 MS.gene25416:CDS
TAAGATACCTGAGAGAGACG+AGG 0.739106 8.2:+40462480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.2:40462861-40462880 MS.gene25416:CDS 15.0%
!!! TTTTTAATTCATTAAGTGAT+TGG + chr8.2:40461567-40461586 None:intergenic 15.0%
!! AAAAACATCTAGCAAATATA+GGG + chr8.2:40461403-40461422 None:intergenic 20.0%
!! AGTTTAATTGAATCAATCTT+TGG - chr8.2:40462616-40462635 MS.gene25416:CDS 20.0%
!! ATTCAATTAAACTCAAAAAC+TGG + chr8.2:40462609-40462628 None:intergenic 20.0%
!! CTTCATATATATCTCTATTT+CGG + chr8.2:40462292-40462311 None:intergenic 20.0%
!!! AATTTGTTTGGTAAAAACTA+GGG - chr8.2:40460970-40460989 MS.gene25416:intron 20.0%
!!! TATATTTGCTAGATGTTTTT+CGG - chr8.2:40461403-40461422 MS.gene25416:CDS 20.0%
!!! TATCACATTATGAATTTGTT+TGG - chr8.2:40460958-40460977 MS.gene25416:intron 20.0%
! AACAAATTTACTTTCAGATG+GGG + chr8.2:40462249-40462268 None:intergenic 25.0%
! AAGAAAGAGAAACATTTATG+CGG - chr8.2:40462309-40462328 MS.gene25416:intron 25.0%
! AGAAAATGACATTTACCAAA+CGG - chr8.2:40461310-40461329 MS.gene25416:CDS 25.0%
! ATTGGTAAATTTCAAACTCT+TGG + chr8.2:40462111-40462130 None:intergenic 25.0%
! CAACAAATTTACTTTCAGAT+GGG + chr8.2:40462250-40462269 None:intergenic 25.0%
! GAAAAACATCTAGCAAATAT+AGG + chr8.2:40461404-40461423 None:intergenic 25.0%
! TCAACAAATTTACTTTCAGA+TGG + chr8.2:40462251-40462270 None:intergenic 25.0%
! TGATGTAAATTGCAAAATTC+TGG + chr8.2:40462483-40462502 None:intergenic 25.0%
! TTACCAATAACAATTTCACT+TGG - chr8.2:40462123-40462142 MS.gene25416:intron 25.0%
! TTGGTAAATTTCAAACTCTT+GGG + chr8.2:40462110-40462129 None:intergenic 25.0%
!! GAATTTGTTTGGTAAAAACT+AGG - chr8.2:40460969-40460988 MS.gene25416:intron 25.0%
!! GGTAGATTATCATCTTTTAA+AGG - chr8.2:40461765-40461784 MS.gene25416:intron 25.0%
!! GTGAAGTTTTACTGTTATTA+TGG - chr8.2:40462353-40462372 MS.gene25416:intron 25.0%
!! GTTGAATATATTTTGCAGAA+CGG - chr8.2:40462817-40462836 MS.gene25416:CDS 25.0%
!!! AGATTATCATCTTTTAAAGG+TGG - chr8.2:40461768-40461787 MS.gene25416:intron 25.0%
!!! ATATATTTTTGCCTTGTTTC+TGG - chr8.2:40462668-40462687 MS.gene25416:CDS 25.0%
!!! TTTTTCAATTAAGACCACAT+GGG - chr8.2:40461180-40461199 MS.gene25416:CDS 25.0%
!!! TTTTTTCAATTAAGACCACA+TGG - chr8.2:40461179-40461198 MS.gene25416:CDS 25.0%
AATATCAAAAGTTTCGAGCA+TGG + chr8.2:40462042-40462061 None:intergenic 30.0%
AGTCCAAGTGAAATTGTTAT+TGG + chr8.2:40462129-40462148 None:intergenic 30.0%
AGTTCACATTAATTGTATCC+TGG - chr8.2:40461445-40461464 MS.gene25416:CDS 30.0%
ATATCAAAAGTTTCGAGCAT+GGG + chr8.2:40462041-40462060 None:intergenic 30.0%
ATGATTGAATTTGCAGTGTT+CGG - chr8.2:40461086-40461105 MS.gene25416:CDS 30.0%
CATATATATCTCTATTTCGG+AGG + chr8.2:40462289-40462308 None:intergenic 30.0%
GTAACCATGACAGTTAAAAA+CGG + chr8.2:40460839-40460858 None:intergenic 30.0%
GTATCTGTTGTCTATAACAT+AGG - chr8.2:40461744-40461763 MS.gene25416:intron 30.0%
TCTCATAATTCAGAGCAATA+AGG - chr8.2:40462578-40462597 MS.gene25416:CDS 30.0%
TGGTAAATTTCAAACTCTTG+GGG + chr8.2:40462109-40462128 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG + chr8.2:40462566-40462585 None:intergenic 30.0%
TTTGGTAAAAACTAGGGAAT+AGG - chr8.2:40460976-40460995 MS.gene25416:intron 30.0%
! AGCTAGCTTCTAATTATGAA+AGG - chr8.2:40461124-40461143 MS.gene25416:CDS 30.0%
! ATTTACCAAACGGATCTTTT+CGG - chr8.2:40461320-40461339 MS.gene25416:CDS 30.0%
! GCTGCATTACATGATAATTT+TGG + chr8.2:40461820-40461839 None:intergenic 30.0%
! TAGCAAATATAGGGTTTGTT+TGG + chr8.2:40461394-40461413 None:intergenic 30.0%
! TTATTCCAATTTTACCCATG+TGG + chr8.2:40461197-40461216 None:intergenic 30.0%
! TTCTGGATGATTTAAAACTG+CGG + chr8.2:40462466-40462485 None:intergenic 30.0%
AACGAGAGAGATTGTTGATA+CGG + chr8.2:40460551-40460570 None:intergenic 35.0%
CTGACTTATGTTCACATAGA+AGG - chr8.2:40462763-40462782 MS.gene25416:CDS 35.0%
CTTCTATGTGAACATAAGTC+AGG + chr8.2:40462765-40462784 None:intergenic 35.0%
GGTAAATTTCAAACTCTTGG+GGG + chr8.2:40462108-40462127 None:intergenic 35.0%
GTAAATTTCAAACTCTTGGG+GGG + chr8.2:40462107-40462126 None:intergenic 35.0%
GTTCACATAGAAGGATATCA+AGG - chr8.2:40462772-40462791 MS.gene25416:CDS 35.0%
TAAATTATTACCGCTGTCTG+CGG - chr8.2:40461708-40461727 MS.gene25416:intron 35.0%
TAAGACCACATGGGTAAAAT+TGG - chr8.2:40461189-40461208 MS.gene25416:CDS 35.0%
TATCAAAAGTTTCGAGCATG+GGG + chr8.2:40462040-40462059 None:intergenic 35.0%
TCACACCTCATTAATTGATG+TGG - chr8.2:40461598-40461617 MS.gene25416:intron 35.0%
TTGAATGTAACTACATCCGT+CGG + chr8.2:40461485-40461504 None:intergenic 35.0%
! AAAAGATTCGAGTTAAAGCG+GGG + chr8.2:40462522-40462541 None:intergenic 35.0%
! AACCATCACCTTTAAGAACA+TGG - chr8.2:40462698-40462717 MS.gene25416:CDS 35.0%
! AATATAGGGTTTGTTTGGCA+AGG + chr8.2:40461389-40461408 None:intergenic 35.0%
! ACCATCACCTTTAAGAACAT+GGG - chr8.2:40462699-40462718 MS.gene25416:CDS 35.0%
! AGGTGAGATTCAAGACATTT+TGG + chr8.2:40462745-40462764 None:intergenic 35.0%
! CAAAAGATTCGAGTTAAAGC+GGG + chr8.2:40462523-40462542 None:intergenic 35.0%
! GCAAAAGATTCGAGTTAAAG+CGG + chr8.2:40462524-40462543 None:intergenic 35.0%
! TGGCTAATTGCATTGATATG+TGG - chr8.2:40460770-40460789 MS.gene25416:intron 35.0%
!! CGTTTTGTTCTTCTGCTTTT+TGG + chr8.2:40460447-40460466 None:intergenic 35.0%
!! TTTTGGTTGAGAGGAATGAA+AGG + chr8.2:40460525-40460544 None:intergenic 35.0%
!!! AAGGTTTTGAAGAGTTGTTG+CGG + chr8.2:40460655-40460674 None:intergenic 35.0%
!!! ATTTTTGCCTTGTTTCTGGT+AGG - chr8.2:40462672-40462691 MS.gene25416:CDS 35.0%
AATTCCTATGTCGGGATAAC+AGG + chr8.2:40462168-40462187 None:intergenic 40.0%
AGAGACAAATCTACAAGGTG+GGG + chr8.2:40460814-40460833 None:intergenic 40.0%
AGCAGTTGAAGAGTGAAGAA+GGG + chr8.2:40460876-40460895 None:intergenic 40.0%
AGCCAGAAACATGTCATCAT+CGG + chr8.2:40460755-40460774 None:intergenic 40.0%
AGTGATTGGCAACACATCAT+TGG + chr8.2:40461553-40461572 None:intergenic 40.0%
AGTTTCAGCATCTTCAGTGA+TGG + chr8.2:40461972-40461991 None:intergenic 40.0%
ATGTGGCTCAATGCTGTTAA+TGG - chr8.2:40460787-40460806 MS.gene25416:intron 40.0%
ATTGAAGATGCTTCCAGAGA+TGG + chr8.2:40460588-40460607 None:intergenic 40.0%
CAATTGAGTCCAAAAGGACA+TGG + chr8.2:40461998-40462017 None:intergenic 40.0%
CCTCATTAATTGATGTGGCA+AGG - chr8.2:40461603-40461622 MS.gene25416:intron 40.0%
CCTTGCCACATCAATTAATG+AGG + chr8.2:40461606-40461625 None:intergenic 40.0%
GAGAGACAAATCTACAAGGT+GGG + chr8.2:40460815-40460834 None:intergenic 40.0%
GCCAATGTAATTCCTATGTC+GGG + chr8.2:40462176-40462195 None:intergenic 40.0%
GGCCAATGTAATTCCTATGT+CGG + chr8.2:40462177-40462196 None:intergenic 40.0%
GGGAATAGGTTACATTGTAG+CGG - chr8.2:40460990-40461009 MS.gene25416:intron 40.0%
TACACCATCGGTAAAAGATG+TGG + chr8.2:40462075-40462094 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG - chr8.2:40462789-40462808 MS.gene25416:CDS 40.0%
TCCCATGTTCTTAAAGGTGA+TGG + chr8.2:40462703-40462722 None:intergenic 40.0%
TCCCGACATAGGAATTACAT+TGG - chr8.2:40462172-40462191 MS.gene25416:intron 40.0%
TGACGGTGCAATCTATTTGA+AGG - chr8.2:40461923-40461942 MS.gene25416:intron 40.0%
TGAGAGACAAATCTACAAGG+TGG + chr8.2:40460816-40460835 None:intergenic 40.0%
TGTAGCTGATAGCTGATAAG+CGG - chr8.2:40461031-40461050 MS.gene25416:intron 40.0%
TTCGCAGTAACAATTGGAGT+CGG + chr8.2:40460629-40460648 None:intergenic 40.0%
TTCGGAGGTTGTAGAGAATA+GGG + chr8.2:40462274-40462293 None:intergenic 40.0%
TTGAAACACTGCAGTCTTGA+CGG - chr8.2:40461906-40461925 MS.gene25416:intron 40.0%
TTGAGAGGAATGAAAGGATG+TGG + chr8.2:40460519-40460538 None:intergenic 40.0%
TTTCGGAGGTTGTAGAGAAT+AGG + chr8.2:40462275-40462294 None:intergenic 40.0%
TTTGACCGAAAAGATCCGTT+TGG + chr8.2:40461328-40461347 None:intergenic 40.0%
! AAAGATTAGCCGATGTACCA+AGG - chr8.2:40462911-40462930 MS.gene25416:CDS 40.0%
! AAGATTAGCCGATGTACCAA+GGG - chr8.2:40462912-40462931 MS.gene25416:CDS 40.0%
! ATCACCACATCTTTTACCGA+TGG - chr8.2:40462068-40462087 MS.gene25416:intron 40.0%
! GATTGTTGATACGGAGGTTT+TGG + chr8.2:40460542-40460561 None:intergenic 40.0%
! TGATTTAAAACTGCGGTGTG+AGG + chr8.2:40462459-40462478 None:intergenic 40.0%
! TTGTTGTTGTGTACAAGCAG+TGG - chr8.2:40462430-40462449 MS.gene25416:intron 40.0%
! TTTGGAACTGTTGTTGACTG+TGG + chr8.2:40462727-40462746 None:intergenic 40.0%
!! CTCACCGTTTTTAACTGTCA+TGG - chr8.2:40460832-40460851 MS.gene25416:CDS 40.0%
!!! AGGTTTTGAAGAGTTGTTGC+GGG + chr8.2:40460654-40460673 None:intergenic 40.0%
AATTTCAAACTCTTGGGGGG+AGG + chr8.2:40462104-40462123 None:intergenic 45.0%
ACTCTGCAAGTTGTCAAGGA+CGG + chr8.2:40462198-40462217 None:intergenic 45.0%
ATGTGGCAGAGTATAGAGTC+TGG + chr8.2:40460502-40460521 None:intergenic 45.0%
ATTGATACTACCGCAGACAG+CGG + chr8.2:40461721-40461740 None:intergenic 45.0%
CGGTGAGAGACAAATCTACA+AGG + chr8.2:40460819-40460838 None:intergenic 45.0%
GAACAAAACGACGTCGTCAT+CGG - chr8.2:40460457-40460476 MS.gene25416:CDS 45.0%
GAGAGAGATTGTTGATACGG+AGG + chr8.2:40460548-40460567 None:intergenic 45.0%
GAGCAGTTGAAGAGTGAAGA+AGG + chr8.2:40460877-40460896 None:intergenic 45.0%
GCAGAGTATAGAGTCTGGTA+AGG + chr8.2:40460497-40460516 None:intergenic 45.0%
GGGCAACAATTGAGTCCAAA+AGG + chr8.2:40462004-40462023 None:intergenic 45.0%
GTAACAATTGGAGTCGGAGT+CGG + chr8.2:40460623-40460642 None:intergenic 45.0%
TAAGATACCTGAGAGAGACG+AGG + chr8.2:40460903-40460922 None:intergenic 45.0%
TCAATTGTTGCCCTTCTCTC+TGG - chr8.2:40462011-40462030 MS.gene25416:intron 45.0%
TGAAGAGTGAAGAAGGGAAG+AGG + chr8.2:40460870-40460889 None:intergenic 45.0%
TGTGGCTCCCATGTTCTTAA+AGG + chr8.2:40462709-40462728 None:intergenic 45.0%
TTGAGTCCAAAAGGACATGG+TGG + chr8.2:40461995-40462014 None:intergenic 45.0%
! AGATTAGCCGATGTACCAAG+GGG - chr8.2:40462913-40462932 MS.gene25416:CDS 45.0%
! GAAACTCCACCATGTCCTTT+TGG - chr8.2:40461986-40462005 MS.gene25416:intron 45.0%
! TTTAAAACTGCGGTGTGAGG+TGG + chr8.2:40462456-40462475 None:intergenic 45.0%
!! TTTGCCTTGTTTCTGGTAGG+AGG - chr8.2:40462675-40462694 MS.gene25416:CDS 45.0%
!!! ATACGGAGGTTTTGGTTGAG+AGG + chr8.2:40460534-40460553 None:intergenic 45.0%
ACGCAGCTTTCGAATGTGAC+GGG + chr8.2:40460716-40460735 None:intergenic 50.0%
ATACCTGAGAGAGACGAGGT+TGG + chr8.2:40460899-40460918 None:intergenic 50.0%
CCACACTCTGCAAGTTGTCA+AGG + chr8.2:40462202-40462221 None:intergenic 50.0%
CCTTGACAACTTGCAGAGTG+TGG - chr8.2:40462199-40462218 MS.gene25416:intron 50.0%
CGAAAGCTGCGTCTCAAATG+TGG - chr8.2:40460724-40460743 MS.gene25416:intron 50.0%
CGCCGATGATGACATGTTTC+TGG - chr8.2:40460750-40460769 MS.gene25416:intron 50.0%
CGGGTGTTCGCAGTAACAAT+TGG + chr8.2:40460635-40460654 None:intergenic 50.0%
GACGCAGCTTTCGAATGTGA+CGG + chr8.2:40460717-40460736 None:intergenic 50.0%
GACTCCTGTTATCCCGACAT+AGG - chr8.2:40462161-40462180 MS.gene25416:intron 50.0%
GCTGCGTCATTCGACATCAA+AGG - chr8.2:40462331-40462350 MS.gene25416:intron 50.0%
GGTTCCTCCTACCAGAAACA+AGG + chr8.2:40462682-40462701 None:intergenic 50.0%
TGACAACTTGCAGAGTGTGG+TGG - chr8.2:40462202-40462221 MS.gene25416:intron 50.0%
! TTCGAATGTGACGGGATTCG+CGG + chr8.2:40460708-40460727 None:intergenic 50.0%
!! GGTGTTGACGAAGGATGCAA+AGG + chr8.2:40460674-40460693 None:intergenic 50.0%
GACAGAGCCCCTTGGTACAT+CGG + chr8.2:40462923-40462942 None:intergenic 55.0%
TTCAAACTCTTGGGGGGAGG+TGG + chr8.2:40462101-40462120 None:intergenic 55.0%
TTGCATGTGACAGAGCCCCT+TGG + chr8.2:40462931-40462950 None:intergenic 55.0%
! AATGTGACGGGATTCGCGGA+GGG + chr8.2:40460704-40460723 None:intergenic 55.0%
AAACTCTTGGGGGGAGGTGG+TGG + chr8.2:40462098-40462117 None:intergenic 60.0%
ACATCCGTCGGTCGTCGAAG+TGG + chr8.2:40461473-40461492 None:intergenic 60.0%
CATGGGGCAGCCAGAGAGAA+GGG + chr8.2:40462024-40462043 None:intergenic 60.0%
GCTCCAACCTCGTCTCTCTC+AGG - chr8.2:40460893-40460912 MS.gene25416:CDS 60.0%
GGTTCCACTTCGACGACCGA+CGG - chr8.2:40461466-40461485 MS.gene25416:intron 60.0%
TCGGTCGTCGAAGTGGAACC+AGG + chr8.2:40461466-40461485 None:intergenic 60.0%
TCTCTCTCGTTTCTCGCCGC+TGG - chr8.2:40460560-40460579 MS.gene25416:CDS 60.0%
! GAATGTGACGGGATTCGCGG+AGG + chr8.2:40460705-40460724 None:intergenic 60.0%
! GGGAGGTGGTGGTACACCAT+CGG + chr8.2:40462087-40462106 None:intergenic 60.0%
!! GGCGAAGACGGTGTTGACGA+AGG + chr8.2:40460683-40460702 None:intergenic 60.0%
GCATGGGGCAGCCAGAGAGA+AGG + chr8.2:40462025-40462044 None:intergenic 65.0%
GCTTCCAGAGATGGCGCCAG+CGG + chr8.2:40460579-40460598 None:intergenic 65.0%
GGATTCGCGGAGGGCGAAGA+CGG + chr8.2:40460695-40460714 None:intergenic 65.0%
CTCGCCGCTGGCGCCATCTC+TGG - chr8.2:40460572-40460591 MS.gene25416:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 40460421 40462981 40460421 ID=MS.gene25416
chr8.2 mRNA 40460421 40462981 40460421 ID=MS.gene25416.t1;Parent=MS.gene25416
chr8.2 exon 40462488 40462981 40462488 ID=MS.gene25416.t1.exon1;Parent=MS.gene25416.t1
chr8.2 CDS 40462488 40462981 40462488 ID=cds.MS.gene25416.t1;Parent=MS.gene25416.t1
chr8.2 exon 40461050 40461482 40461050 ID=MS.gene25416.t1.exon2;Parent=MS.gene25416.t1
chr8.2 CDS 40461050 40461482 40461050 ID=cds.MS.gene25416.t1;Parent=MS.gene25416.t1
chr8.2 exon 40460803 40460952 40460803 ID=MS.gene25416.t1.exon3;Parent=MS.gene25416.t1
chr8.2 CDS 40460803 40460952 40460803 ID=cds.MS.gene25416.t1;Parent=MS.gene25416.t1
chr8.2 exon 40460421 40460708 40460421 ID=MS.gene25416.t1.exon4;Parent=MS.gene25416.t1
chr8.2 CDS 40460421 40460708 40460421 ID=cds.MS.gene25416.t1;Parent=MS.gene25416.t1
Gene Sequence

>MS.gene25416

ATGGCGGAGTCAAGCATGAAACTCCAAAAAGCAGAAGAACAAAACGACGTCGTCATCGGTGATATCATAAGCACCTTACCAGACTCTATACTCTGCCACATCCTTTCATTCCTCTCAACCAAAACCTCCGTATCAACAATCTCTCTCGTTTCTCGCCGCTGGCGCCATCTCTGGAAGCATCTTCAATCATTCAACTTCTCCGACTCCGACTCCAATTGTTACTGCGAACACCCGCAACAACTCTTCAAAACCTTTGCATCCTTCGTCAACACCGTCTTCGCCCTCCGCGAATCCCGTCACATTCGAAAGCTGCGTCTCAAATGTGGCATCGCCGATGATGACATGTTTCTGGCTAATTGCATTGATATGTGGCTCAATGCTGTTAATGGACCCCACCTTGTAGATTTGTCTCTCACCGTTTTTAACTGTCATGGTTACACTAACTTCCTCTTCCCTTCTTCACTCTTCAACTGCTCCAACCTCGTCTCTCTCAGGTATCTTAATTTATAGCTCATATCATACTAGATTTTTTATCACTATCACATTATGAATTTGTTTGGTAAAAACTAGGGAATAGGTTACATTGTAGCGGATAGTTAATAAGTTAGCTTGTAGCTGATAGCTGATAAGCGGAGCTAGCTTATAGTTGATAGCGTATATGTTAGATGATTGAATTTGCAGTGTTCGGTAAAATTAGTTGTTGAGCTAGCTTCTAATTATGAAAGGACATAAATAAGAGATATTTAATTAATATTTAATTTTTTCAATTAAGACCACATGGGTAAAATTGGAATAAAATATGATAAGCTGTAAGCTTTAAGCTATAAGCTAATTCAAGTAGCTTATAAAAAAATGTTGTAAGCTAGTAAAAATAAGACATAAGTTCATGAGAAAATGACATTTACCAAACGGATCTTTTCGGTCAAATAAGCTTATAAGACATAAGCTATATGCTGAAAAAAGTGCCTTGCCAAACAAACCCTATATTTGCTAGATGTTTTTCGGATCACTATCTAGCATAGACAGTTCACATTAATTGTATCCTGGTTCCACTTCGACGACCGACGGATGTAGTTACATTCAAATATGACTTTAATTTATATAGTGTATAAAAGTTTCACACATACATCCAATGATGTGTTGCCAATCACTTAATGAATTAAAAACACGTGACTTGTCACACCTCATTAATTGATGTGGCAAGGCAACACATCATTTGATGCGCGTGTAAAACTTTTGTAAGCTCACAGTGTATATAAATTAAACTTTTCAAATATTTCATTTTGTTAAATTATTACCGCTGTCTGCGGTAGTATCAATGTTGTATCTGTTGTCTATAACATAGGTAGATTATCATCTTTTAAAGGTGGAGATGAAAAGTGAAATCAGTAATATACCAAAATTATCATGTAATGCAGCTCTCGTTATATTTTTAATTGACATGTAAAATTTTTTAGAATGCTTATTTATATAATAGCATATCTTTTGAAACACTGCAGTCTTGACGGTGCAATCTATTTGAAGGTTCAAGATTCTTCTGTTTATTTTCCATCACTGAAGATGCTGAAACTCCACCATGTCCTTTTGGACTCAATTGTTGCCCTTCTCTCTGGCTGCCCCATGCTCGAAACTTTTGATATTGACTTTATCACCACATCTTTTACCGATGGTGTACCACCACCTCCCCCCAAGAGTTTGAAATTTACCAATAACAATTTCACTTGGACTTACATTGAAGTAGACTCCTGTTATCCCGACATAGGAATTACATTGGCCGTCCTTGACAACTTGCAGAGTGTGGTGGAATCATATCTTGACGTCTTTTCCCCATCTGAAAGTAAATTTGTTGACCCTATTCTCTACAACCTCCGAAATAGAGATATATATGAAGAAAGAGAAACATTTATGCGGCTGCGTCATTCGACATCAAAGGTGAAGTTTTACTGTTATTATGGTTTATAGTTTATATGTATGTATGTAGTTTTATTATAATATTGAATCATCACTTGTTGTTGTTGTGTACAAGCAGTGGCCACCTCACACCGCAGTTTTAAATCATCCAGAATTTTGCAATTTACATCATCTAAAGTTGATTCTACCCCGCTTTAACTCGAATCTTTTGCTCATCGTGCTTGAGAAATGCCATATGCTTCAAGTTCTCATAATTCAGAGCAATAAGGTTTGTCCAGTTTTTGAGTTTAATTGAATCAATCTTTGGTCTGTCTATGTATCTATCTAAACACACAAATATATTTTTGCCTTGTTTCTGGTAGGAGGAACCATCACCTTTAAGAACATGGGAGCCACAGTCAACAACAGTTCCAAAATGTCTTGAATCTCACCTGACTTATGTTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGTTGAATATATTTTGCAGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACATAACAAAAAAGTATTGTTCTCTCAAAAGATTAGCCGATGTACCAAGGGGCTCTGTCACATGCAAACTTAAATTCGACGCAGCCGTGTCTCCTTAA
Protein sequence

>MS.gene25416.t1

MAESSMKLQKAEEQNDVVIGDIISTLPDSILCHILSFLSTKTSVSTISLVSRRWRHLWKHLQSFNFSDSDSNCYCEHPQQLFKTFASFVNTVFALRESRHIRKLRLKCGIADDDMFLANCIDMWLNAVNGPHLVDLSLTVFNCHGYTNFLFPSSLFNCSNLVSLSLDGAIYLKVQDSSVYFPSLKMLKLHHVLLDSIVALLSGCPMLETFDIDFITTSFTDGVPPPPPKSLKFTNNNFTWTYIEVDSCYPDIGITLAVLDNLQSVVESYLDVFSPSESKFVDPILYNLRNRDIYEERETFMRLRHSTSKWPPHTAVLNHPEFCNLHHLKLILPRFNSNLLLIVLEKCHMLQVLIIQSNKEEPSPLRTWEPQSTTVPKCLESHLTYVHIEGYQGFEDELAFVEYILQNGLVLKTMLIFVDISMDITKKYCSLKRLADVPRGSVTCKLKFDAAVSP