AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26397

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26397.t1 MTR_4g088210 95.955 717 21 3 1 714 1 712 0.0 1419
MS.gene26397.t1 MTR_4g088210 95.863 701 21 3 1 698 1 696 0.0 1385
MS.gene26397.t1 MTR_2g014770 65.312 689 193 17 2 653 1 680 0.0 827
MS.gene26397.t1 MTR_2g014770 76.957 447 88 4 2 436 1 444 0.0 687
MS.gene26397.t1 MTR_2g014770 39.234 209 99 11 468 653 408 611 1.99e-23 105
MS.gene26397.t1 MTR_2g093740 50.415 482 211 9 42 506 55 525 3.22e-150 453
MS.gene26397.t1 MTR_2g093740 42.523 642 331 14 42 661 55 680 2.31e-149 453
MS.gene26397.t1 MTR_2g093740 42.523 642 331 14 42 661 55 680 8.20e-149 453
MS.gene26397.t1 MTR_4g060460 47.955 538 251 10 42 556 53 584 1.14e-148 452
MS.gene26397.t1 MTR_4g060460 48.066 543 248 12 42 556 53 589 6.02e-148 451
MS.gene26397.t1 MTR_2g093740 41.679 655 331 15 42 661 55 693 1.93e-146 444
MS.gene26397.t1 MTR_2g093740 41.679 655 331 15 42 661 55 693 2.02e-145 443
MS.gene26397.t1 MTR_2g093740 41.679 655 331 15 42 661 55 693 4.87e-145 444
MS.gene26397.t1 MTR_8g100050 46.963 428 198 5 18 434 41 450 2.61e-125 390
MS.gene26397.t1 MTR_8g100050 46.963 428 198 5 18 434 41 450 4.35e-124 390
MS.gene26397.t1 MTR_2g005240 48.101 395 179 6 22 405 2 381 7.25e-117 366
MS.gene26397.t1 MTR_2g093740 40.687 553 301 12 126 661 8 550 1.11e-115 361
MS.gene26397.t1 MTR_2g093740 40.687 553 301 12 126 661 8 550 2.60e-115 362
MS.gene26397.t1 MTR_4g021580 44.725 436 205 11 43 466 19 430 6.32e-113 354
MS.gene26397.t1 MTR_4g021580 44.725 436 205 11 43 466 19 430 2.84e-112 354
MS.gene26397.t1 MTR_2g093740 39.753 566 301 13 126 661 8 563 6.52e-112 352
MS.gene26397.t1 MTR_2g093740 39.753 566 301 13 126 661 8 563 2.24e-111 352
MS.gene26397.t1 MTR_5g076270 47.769 381 167 6 33 397 12 376 2.65e-108 348
MS.gene26397.t1 MTR_2g018690 48.942 378 160 8 43 404 23 383 3.86e-108 350
MS.gene26397.t1 MTR_8g027440 48.907 366 163 9 43 400 29 378 3.39e-107 341
MS.gene26397.t1 MTR_4g124900 48.485 363 165 6 27 380 7 356 1.11e-105 347
MS.gene26397.t1 MTR_4g124900 48.485 363 165 6 27 380 7 356 1.90e-105 347
MS.gene26397.t1 MTR_3g064050 47.989 373 162 6 41 397 22 378 2.17e-105 341
MS.gene26397.t1 MTR_2g043250 48.901 364 166 5 25 380 5 356 3.14e-105 346
MS.gene26397.t1 MTR_8g079492 47.480 377 166 8 43 404 23 382 4.46e-105 342
MS.gene26397.t1 MTR_8g079492 47.480 377 166 8 43 404 23 382 4.84e-105 342
MS.gene26397.t1 MTR_7g062540 42.453 424 207 9 32 443 3 401 1.34e-103 332
MS.gene26397.t1 MTR_8g101360 46.036 391 166 8 9 380 2 366 8.84e-102 337
MS.gene26397.t1 MTR_1g024025 47.297 370 161 7 43 397 43 393 2.38e-100 335
MS.gene26397.t1 MTR_8g079492 49.038 312 143 6 97 404 1 300 1.11e-87 293
MS.gene26397.t1 MTR_2g094570 41.316 380 165 9 43 379 11 375 1.49e-83 279
MS.gene26397.t1 MTR_2g094570 41.316 380 165 9 43 379 11 375 1.68e-83 278
MS.gene26397.t1 MTR_2g094570 41.316 380 165 9 43 379 67 431 5.73e-83 279
MS.gene26397.t1 MTR_1g094960 40.157 381 179 10 38 379 12 382 1.32e-79 266
MS.gene26397.t1 MTR_1g064430 33.456 544 271 18 41 508 23 551 4.34e-75 256
MS.gene26397.t1 MTR_1g064430 33.456 544 271 18 41 508 36 564 7.08e-75 256
MS.gene26397.t1 MTR_4g058930 39.791 382 174 8 43 379 12 382 1.54e-74 254
MS.gene26397.t1 MTR_4g058930 39.791 382 174 8 43 379 12 382 2.45e-74 254
MS.gene26397.t1 MTR_8g446900 39.003 341 182 5 83 421 7 323 2.53e-74 245
MS.gene26397.t1 MTR_7g101280 37.340 391 184 12 39 379 27 406 4.07e-70 241
MS.gene26397.t1 MTR_0041s0110 37.340 391 184 12 39 379 27 406 4.07e-70 241
MS.gene26397.t1 MTR_7g101275 40.000 310 172 6 52 358 1 299 2.29e-65 222
MS.gene26397.t1 MTR_3g073420 35.980 403 204 9 36 399 12 399 2.99e-62 219
MS.gene26397.t1 MTR_5g040880 35.652 345 190 8 43 379 11 331 2.20e-61 214
MS.gene26397.t1 MTR_5g061220 33.693 371 190 11 43 379 19 367 6.54e-58 205
MS.gene26397.t1 MTR_2g024430 33.498 406 231 11 29 423 6 383 6.19e-57 202
MS.gene26397.t1 MTR_0041s0120 36.667 330 167 10 52 358 1 311 3.33e-54 192
MS.gene26397.t1 MTR_1g058210 30.347 346 213 8 43 379 12 338 1.08e-47 175
MS.gene26397.t1 MTR_5g040740 32.831 332 182 9 43 361 12 315 1.39e-47 174
MS.gene26397.t1 MTR_5g082140 32.378 349 200 11 43 379 12 336 5.61e-46 171
MS.gene26397.t1 MTR_2g006270 31.549 355 204 10 38 379 8 336 7.54e-42 159
MS.gene26397.t1 MTR_5g060780 29.201 363 218 12 43 389 12 351 1.30e-37 145
MS.gene26397.t1 MTR_5g460920 29.201 363 218 12 43 389 12 351 1.53e-37 145
MS.gene26397.t1 MTR_2g006380 30.168 358 200 14 38 379 15 338 3.73e-37 145
MS.gene26397.t1 MTR_5g060630 29.333 375 227 12 43 385 12 380 1.23e-36 145
MS.gene26397.t1 MTR_5g460740 29.333 375 227 12 43 385 12 380 1.23e-36 145
MS.gene26397.t1 MTR_5g061890 29.201 363 218 12 43 389 12 351 3.29e-35 138
MS.gene26397.t1 MTR_5g062970 33.906 233 114 5 31 247 26 234 9.25e-34 130
MS.gene26397.t1 MTR_3g064050 44.275 131 71 2 269 397 11 141 6.46e-26 113
MS.gene26397.t1 MTR_5g074840 46.154 91 49 0 213 303 58 148 2.74e-16 77.4
MS.gene26397.t1 MTR_5g032260 32.370 173 98 4 276 432 50 219 1.53e-14 76.6
MS.gene26397.t1 MTR_7g117455 40.217 92 54 1 149 240 116 206 3.59e-12 69.7
MS.gene26397.t1 MTR_8g023990 40.206 97 56 2 149 245 170 264 6.32e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26397.t1 AT2G33860 56.840 519 180 7 1 507 1 487 0.0 577
MS.gene26397.t1 AT5G60450 41.354 694 320 17 5 664 3 643 1.81e-146 446
MS.gene26397.t1 AT5G60450 42.378 656 291 17 43 664 65 667 7.38e-143 437
MS.gene26397.t1 AT2G33860 57.660 359 122 2 150 507 1 330 1.38e-140 420
MS.gene26397.t1 AT5G62000 43.363 452 228 5 3 440 21 458 7.35e-122 385
MS.gene26397.t1 AT5G62000 43.363 452 228 5 3 440 21 458 7.35e-122 385
MS.gene26397.t1 AT5G62000 43.363 452 228 5 3 440 21 458 7.35e-122 385
MS.gene26397.t1 AT5G62000 43.363 452 228 5 3 440 21 458 7.35e-122 385
MS.gene26397.t1 AT5G62000 43.363 452 228 5 3 440 21 458 1.08e-121 384
MS.gene26397.t1 AT1G59750 47.520 383 167 6 20 389 2 363 1.81e-112 354
MS.gene26397.t1 AT1G59750 47.520 383 167 6 20 389 2 363 2.20e-112 354
MS.gene26397.t1 AT1G59750 47.520 383 167 6 20 389 2 363 2.43e-112 354
MS.gene26397.t1 AT1G59750 47.520 383 167 6 20 389 2 363 2.43e-112 354
MS.gene26397.t1 AT2G46530 46.791 374 161 9 31 387 27 379 4.68e-106 336
MS.gene26397.t1 AT2G46530 47.354 359 154 8 43 387 21 358 6.17e-106 335
MS.gene26397.t1 AT4G23980 46.875 352 165 5 37 380 6 343 6.20e-106 337
MS.gene26397.t1 AT4G23980 46.875 352 165 5 37 380 6 343 6.68e-106 336
MS.gene26397.t1 AT1G19220 49.176 364 165 5 25 380 5 356 7.79e-106 347
MS.gene26397.t1 AT3G61830 45.026 382 178 7 43 410 25 388 8.25e-105 332
MS.gene26397.t1 AT5G37020 45.802 393 174 8 22 397 4 374 1.78e-104 337
MS.gene26397.t1 AT1G30330 48.276 377 164 6 43 404 23 383 4.51e-104 339
MS.gene26397.t1 AT1G30330 48.276 377 164 6 43 404 25 385 4.89e-104 339
MS.gene26397.t1 AT1G30330 48.276 377 164 6 43 404 25 385 4.89e-104 339
MS.gene26397.t1 AT5G37020 45.802 393 174 8 22 397 4 374 7.06e-104 336
MS.gene26397.t1 AT1G19850 49.008 353 146 8 43 379 43 377 7.65e-102 332
MS.gene26397.t1 AT1G19850 49.008 353 146 8 43 379 54 388 1.00e-101 332
MS.gene26397.t1 AT5G20730 48.305 354 163 5 35 380 16 357 1.45e-100 334
MS.gene26397.t1 AT5G20730 48.169 355 163 6 35 380 16 358 4.83e-99 330
MS.gene26397.t1 AT5G20730 48.169 355 163 6 35 380 16 358 5.21e-99 330
MS.gene26397.t1 AT3G61830 46.386 332 159 5 83 410 21 337 1.38e-92 299
MS.gene26397.t1 AT1G35540 42.234 367 169 8 29 379 13 352 4.46e-90 294
MS.gene26397.t1 AT1G35240 42.936 361 175 8 29 379 13 352 1.19e-89 292
MS.gene26397.t1 AT1G34170 41.192 369 187 7 43 402 25 372 5.37e-89 288
MS.gene26397.t1 AT1G34410 42.105 361 178 8 29 379 13 352 2.11e-88 290
MS.gene26397.t1 AT1G34390 42.659 361 174 9 29 379 13 350 2.16e-88 289
MS.gene26397.t1 AT1G34310 41.828 361 179 8 29 379 13 352 7.48e-86 282
MS.gene26397.t1 AT1G35520 42.373 354 173 8 36 379 20 352 2.22e-85 281
MS.gene26397.t1 AT2G46530 54.202 238 105 3 151 387 37 271 1.18e-82 271
MS.gene26397.t1 AT5G37020 53.414 249 114 2 151 397 31 279 2.55e-81 273
MS.gene26397.t1 AT2G28350 38.200 411 200 10 43 410 10 409 8.60e-81 271
MS.gene26397.t1 AT2G28350 38.200 411 200 10 43 410 10 409 1.34e-80 271
MS.gene26397.t1 AT4G30080 40.054 372 181 7 43 379 19 383 4.97e-78 263
MS.gene26397.t1 AT1G34170 38.211 369 172 7 43 402 25 346 1.35e-76 254
MS.gene26397.t1 AT1G34170 38.211 369 172 7 43 402 25 346 9.09e-76 254
MS.gene26397.t1 AT1G77850 33.251 403 213 8 44 412 20 400 3.21e-62 218
MS.gene26397.t1 AT1G77850 33.251 403 213 8 44 412 20 400 3.57e-62 219
MS.gene26397.t1 AT1G43950 43.421 228 105 6 29 250 13 222 7.38e-52 179
MS.gene26397.t1 AT2G46870 33.835 133 82 2 136 263 20 151 1.28e-13 72.8
MS.gene26397.t1 AT1G01030 40.217 92 54 1 149 240 54 144 5.06e-13 71.2
MS.gene26397.t1 AT1G01030 40.217 92 54 1 149 240 54 144 6.62e-13 71.2
MS.gene26397.t1 AT4G01500 39.130 92 53 1 149 240 34 122 8.34e-13 70.9
MS.gene26397.t1 AT3G25730 26.132 287 166 10 2 249 4 283 7.76e-12 67.8
MS.gene26397.t1 AT1G68840 34.127 126 78 3 128 249 163 287 8.30e-11 64.7
MS.gene26397.t1 AT1G68840 34.127 126 78 3 128 249 163 287 8.30e-11 64.7

Find 189 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCATTAACTATGTCTTTA+AGG 0.125975 4.1:+22080619 None:intergenic
CTTGACCTTGCAAGACCTTC+TGG 0.208058 4.1:+22078780 None:intergenic
ACAAGTCTCACCTCACTTTC+AGG 0.212334 4.1:+22081776 None:intergenic
CTTGACCTTGCAAGACCTTC+TGG 0.215232 4.1:+22078573 None:intergenic
TTCATCAAAGCTAGAGTTTC+CGG 0.216516 4.1:-22078945 MS.gene26397:CDS
GGTGCTGTTGGTTCTGGTTC+TGG 0.228992 4.1:-22082398 MS.gene26397:CDS
ACAACAACACTTCCTTTCTT+TGG 0.242841 4.1:+22082320 None:intergenic
TTCTGGTTCTTCTGTTTGTT+TGG 0.296671 4.1:-22082381 MS.gene26397:CDS
ATTCCTCTAACAGGTAGAAT+TGG 0.305603 4.1:-22078833 MS.gene26397:intron
CTGCCTCAACGCCAACTAAT+AGG 0.307928 4.1:-22078280 MS.gene26397:CDS
AGTGTTGGTGCTGTTGGTTC+TGG 0.317923 4.1:-22082404 MS.gene26397:CDS
GACCATCCATTTGTGGATCT+TGG 0.321293 4.1:+22078455 None:intergenic
CTTCTGTTTGTTTGGAGCTA+TGG 0.324256 4.1:-22082373 MS.gene26397:CDS
TGAGCTGGCCCGCGGAAAAT+AGG 0.324659 4.1:+22078257 None:intergenic
AGATTCACAGGACTAATTAT+TGG 0.332947 4.1:-22080242 MS.gene26397:CDS
GAATTGGGACATCAGACTTT+GGG 0.338470 4.1:-22078817 MS.gene26397:CDS
GATGTTTCCTGCAATGGCTT+TGG 0.342344 4.1:-22078611 MS.gene26397:CDS
GGCTACCAAGATTCAATTGC+TGG 0.343727 4.1:+22080640 None:intergenic
AATCCATGGTTGACGCTTGC+TGG 0.351834 4.1:+22078384 None:intergenic
ACTCAGTTGGAATGAGGTTC+AGG 0.363746 4.1:-22080376 MS.gene26397:CDS
AACAAGAAGAAACTTGTATC+TGG 0.365188 4.1:-22080849 MS.gene26397:CDS
TTTGATCCAGGCCATCTAAC+AGG 0.365768 4.1:+22080203 None:intergenic
ACCTCTGTAATTCAGATAAC+TGG 0.374442 4.1:+22078705 None:intergenic
TGGTACACATTCACGCGATT+TGG 0.374841 4.1:-22078216 MS.gene26397:CDS
CAAGGCTCTTTAAGAATTTG+TGG 0.377814 4.1:+22080408 None:intergenic
TTAGATGGCCTGGATCAAAA+TGG 0.391526 4.1:-22080199 MS.gene26397:CDS
TGGAAGCTTCAAGGCTCAAC+AGG 0.392327 4.1:-22079060 MS.gene26397:CDS
AGAAGATGGCGAATTGAGAT+TGG 0.400560 4.1:-22080718 MS.gene26397:CDS
GAAGATGAAACACCTTCTTC+TGG 0.400643 4.1:-22082452 MS.gene26397:CDS
AAAAGTAGCTGCAGAGTGTT+TGG 0.401467 4.1:-22078152 MS.gene26397:CDS
ACAGAAAAGGCTTGTCCATA+TGG 0.405325 4.1:+22078533 None:intergenic
GTCAACGAGGCTTGTAGAAA+TGG 0.411503 4.1:-22078512 MS.gene26397:CDS
GCTTGTAGAAATGGTCGCTT+TGG 0.413112 4.1:-22078503 MS.gene26397:CDS
CGAAGATTGCTTTCCTCCCC+TGG 0.414436 4.1:-22081250 MS.gene26397:intron
AGGGAGGTCCAGGATTTATC+TGG 0.416845 4.1:+22078066 None:intergenic
TTCTTTGGCAAAGAGATCAT+AGG 0.418004 4.1:+22082335 None:intergenic
TTCCACCACCAATAGCTTGA+TGG 0.422972 4.1:-22079002 MS.gene26397:CDS
TTCTGCATCTTTATTTGCAA+TGG 0.425772 4.1:+22078106 None:intergenic
TTTGGCCAGCAATTGAATCT+TGG 0.426004 4.1:-22080645 MS.gene26397:CDS
ACTAGTTGCCATCAAGCTAT+TGG 0.429653 4.1:+22078994 None:intergenic
GTTTCCTGTTGAAGCGATCC+CGG 0.430395 4.1:+22078661 None:intergenic
GAGCTATGGCATGCTTGTGC+TGG 0.433793 4.1:-22082359 MS.gene26397:CDS
TCTGCATCTTTATTTGCAAT+GGG 0.433846 4.1:+22078107 None:intergenic
GTGGATCCTGTTAGATGGCC+TGG 0.434675 4.1:-22080209 MS.gene26397:CDS
CTTGTGAAGGAGGGAGGTCC+AGG 0.435662 4.1:+22078056 None:intergenic
AGGATGAATATTGCTTACTT+TGG 0.437294 4.1:+22077968 None:intergenic
CATAGAACGAACCTCTTTGA+AGG 0.445028 4.1:+22078327 None:intergenic
TTGAGGGAAGGGGTAATTGA+TGG 0.447627 4.1:-22081402 MS.gene26397:CDS
CTTGCAAGACCTTCTGGAAT+CGG 0.448674 4.1:+22078579 None:intergenic
AATTCTGATGTTTCCTGCAA+TGG 0.460396 4.1:-22078617 MS.gene26397:CDS
AGATTCACCAAAGCCATTGC+AGG 0.460830 4.1:+22078604 None:intergenic
CAGAGAAGACCATCCATTTG+TGG 0.461406 4.1:+22078448 None:intergenic
GGTGTATTGTCAGGTGTTGT+TGG 0.462932 4.1:-22081801 MS.gene26397:CDS
ACGGCCAGGAATGGAAGTTT+CGG 0.465467 4.1:-22081030 MS.gene26397:CDS
AGAATTGGGACATCAGACTT+TGG 0.468381 4.1:-22078818 MS.gene26397:CDS
GTCGTAAGCAAATGCCTTCG+TGG 0.468733 4.1:+22080891 None:intergenic
CTTGATTATTCTTACTCAGT+TGG 0.470525 4.1:-22080389 MS.gene26397:CDS
AAACATCAGAATTCATTTGT+GGG 0.471506 4.1:+22078627 None:intergenic
CATGAAGACATGAACTCGTT+TGG 0.472406 4.1:-22078236 MS.gene26397:CDS
TATGCCGAAACTTCCATTCC+TGG 0.474904 4.1:+22081026 None:intergenic
TATCCCGGGATCGCTTCAAC+AGG 0.477815 4.1:-22078665 MS.gene26397:CDS
TCATCTTCAAGTACAAGTAT+AGG 0.478694 4.1:-22082428 MS.gene26397:CDS
ATGATCTCTTTGCCAAAGAA+AGG 0.480251 4.1:-22082332 MS.gene26397:CDS
TTCCTCTAACAGGTAGAATT+GGG 0.480587 4.1:-22078832 MS.gene26397:intron
CTGATGTGGATCCTGTTAGA+TGG 0.481986 4.1:-22080214 MS.gene26397:CDS
TTTCCTGTTGAAGCGATCCC+GGG 0.482214 4.1:+22078662 None:intergenic
AAGATTCTCTTCACTATGAT+GGG 0.485635 4.1:-22082500 None:intergenic
AGTTTGAAGAGGACCAAGAC+TGG 0.486097 4.1:-22078974 MS.gene26397:CDS
ACAAGCCTCGTTGACAGAAA+AGG 0.486107 4.1:+22078520 None:intergenic
AATTGAGACATACTGGGAAC+CGG 0.486594 4.1:+22078926 None:intergenic
GAAACATCAGAATTCATTTG+TGG 0.487206 4.1:+22078626 None:intergenic
TTACTTCCCTCAAGGACACT+TGG 0.489214 4.1:-22082297 MS.gene26397:CDS
GGCAAAGGACCTGCACGGCC+AGG 0.491321 4.1:-22081044 MS.gene26397:CDS
ATACTTCCTAGCCAACCATA+TGG 0.494849 4.1:-22078548 MS.gene26397:CDS
CGAAGGCATTTGCTTACGAC+TGG 0.494928 4.1:-22080888 MS.gene26397:CDS
CTCATCATTTCAGGTAAGGT+GGG 0.495255 4.1:-22079089 MS.gene26397:intron
GATCCCGGGATAGGTTGAAC+CGG 0.495352 4.1:+22078676 None:intergenic
TTATAATAACAAAATTAATC+CGG 0.498479 4.1:-22078363 MS.gene26397:CDS
GTCACTTGCCAGATAAATCC+TGG 0.499622 4.1:-22078074 MS.gene26397:CDS
TGTTGAAGCGATCCCGGGAT+AGG 0.500591 4.1:+22078667 None:intergenic
GGGATGACATGGAAGCTTCA+AGG 0.501986 4.1:-22079069 MS.gene26397:CDS
TGATGAAGGCAATCCAGTCT+TGG 0.502883 4.1:+22078961 None:intergenic
ACAATTGACAGAGGAGAAGA+TGG 0.503689 4.1:-22080732 MS.gene26397:intron
ATTTGCAATGGGAGCACCCT+CGG 0.505296 4.1:+22078118 None:intergenic
ACTTCCATTCCTGGCCGTGC+AGG 0.506870 4.1:+22081035 None:intergenic
TTGCTCCGAAGTGAATGCCT+TGG 0.507472 4.1:+22078011 None:intergenic
CCATGGGAGATTGAGCCCTC+AGG 0.508458 4.1:-22079031 MS.gene26397:CDS
CAACTGAGTAAGAATAATCA+AGG 0.509968 4.1:+22080390 None:intergenic
TGAAGGACGTTATCCTCCAC+CGG 0.511378 4.1:+22078344 None:intergenic
ATAGGTAGTGTTGGTGCTGT+TGG 0.511774 4.1:-22082410 MS.gene26397:CDS
GAAGATGGCGAATTGAGATT+GGG 0.515498 4.1:-22080717 MS.gene26397:CDS
ATTCTTACTCAGTTGGAATG+AGG 0.516705 4.1:-22080382 MS.gene26397:CDS
TGCCATCAAGCTATTGGTGG+TGG 0.517515 4.1:+22079000 None:intergenic
GAACGATGAGGTGTATTGTC+AGG 0.518104 4.1:-22081810 MS.gene26397:CDS
TTCACAAGAGCTTGTGGCAA+AGG 0.520697 4.1:-22081059 MS.gene26397:CDS
TATGCTTCTGAAATGAAAGA+TGG 0.522167 4.1:-22078308 MS.gene26397:CDS
AGGACCTGCACGGCCAGGAA+TGG 0.523330 4.1:-22081039 MS.gene26397:CDS
CAGGGGAGGAAAGCAATCTT+CGG 0.526886 4.1:+22081251 None:intergenic
GCAAGTGCAACAAAAGTTGA+GGG 0.527829 4.1:-22081418 MS.gene26397:CDS
TCTCATCATTTCAGGTAAGG+TGG 0.529211 4.1:-22079090 MS.gene26397:intron
CATTTGTGGATCTTGGCACC+TGG 0.529771 4.1:+22078462 None:intergenic
TGCTGGTACATCAACACTGA+TGG 0.534225 4.1:+22078401 None:intergenic
TATCCCGGTTCAACCTATCC+CGG 0.534428 4.1:-22078680 MS.gene26397:CDS
GCTTGTCCATATGGTTGGCT+AGG 0.536411 4.1:+22078542 None:intergenic
GGCATTTGCTTACGACTGGA+TGG 0.537671 4.1:-22080884 MS.gene26397:CDS
GAGATGCTGTTCTGTTCCTC+CGG 0.539610 4.1:-22080827 MS.gene26397:intron
AATTGAGATTGGGAATCCGC+AGG 0.541630 4.1:-22080707 MS.gene26397:CDS
GAGTTCATGTCTTCATGAGC+TGG 0.542082 4.1:+22078242 None:intergenic
GATGTTCCAAGTGTCCTTGA+GGG 0.542111 4.1:+22082291 None:intergenic
CGATTCCAGAAGGTCTTGCA+AGG 0.542383 4.1:-22078578 MS.gene26397:CDS
AGCAAGTGCAACAAAAGTTG+AGG 0.542657 4.1:-22081419 MS.gene26397:CDS
TTCAACATGTCTTGTGAAGG+AGG 0.544875 4.1:+22078046 None:intergenic
GCTCAACAGGGTTTCACCAT+GGG 0.545772 4.1:-22079047 MS.gene26397:CDS
GAATTACAGAGGTGCTATCC+CGG 0.550009 4.1:-22078695 MS.gene26397:CDS
GCTTCTGATACTAGCACTCA+TGG 0.551937 4.1:-22081300 MS.gene26397:CDS
AAAAGGCTTGTCCATATGGT+TGG 0.552881 4.1:+22078537 None:intergenic
CGGAAAATAGGCCTATTAGT+TGG 0.553897 4.1:+22078269 None:intergenic
ACAGAGAAGCGGTCAAGAGT+TGG 0.561254 4.1:-22078186 MS.gene26397:CDS
CTCTTTAAGAATTTGTGGAT+AGG 0.561415 4.1:+22080413 None:intergenic
TGCAACAAAAGTTGAGGGAA+GGG 0.561765 4.1:-22081413 MS.gene26397:CDS
TAAACGCAGGGCAGCCACGA+AGG 0.562505 4.1:-22080905 MS.gene26397:intron
TCAATCCAAGGCATTCACTT+CGG 0.563879 4.1:-22078016 MS.gene26397:CDS
CTTGAAGATGAACCAGAAGA+AGG 0.564461 4.1:+22082440 None:intergenic
ATCTGGCAAGTGACTGCAGA+GGG 0.565131 4.1:+22078083 None:intergenic
ATCCCGGTTCAACCTATCCC+GGG 0.568291 4.1:-22078679 MS.gene26397:CDS
TTGAAGATGATTTCAATCCA+AGG 0.568841 4.1:-22078028 MS.gene26397:CDS
TTTGCCACAAGCTCTTGTGA+AGG 0.570311 4.1:+22081061 None:intergenic
AGTACAAGTATAGGTAGTGT+TGG 0.571181 4.1:-22082419 MS.gene26397:CDS
TCAGGTAAGGTGGGATGACA+TGG 0.571901 4.1:-22079080 MS.gene26397:intron
CTGAAGATGCTGCAGAGCGA+AGG 0.573424 4.1:-22080340 MS.gene26397:intron
CAGGTGCCAAGATCCACAAA+TGG 0.574271 4.1:-22078461 MS.gene26397:CDS
ATCTTCAACATGTCTTGTGA+AGG 0.575530 4.1:+22078043 None:intergenic
GTTGTTGTTTACTTCCCTCA+AGG 0.575589 4.1:-22082305 MS.gene26397:CDS
GGAAACTCTAGCTTTGATGA+AGG 0.575774 4.1:+22078947 None:intergenic
TCGATAATCATGTCTCTCAC+AGG 0.575881 4.1:+22077948 None:intergenic
TAACAAAATTAATCCGGTGG+AGG 0.578416 4.1:-22078357 MS.gene26397:CDS
AAGGCATTCACTTCGGAGCA+AGG 0.579813 4.1:-22078009 MS.gene26397:CDS
GTAATTGATGGTGATGGTGA+TGG 0.584113 4.1:-22081390 MS.gene26397:CDS
CCTGAGGGCTCAATCTCCCA+TGG 0.586174 4.1:+22079031 None:intergenic
TGGATTGTAGTGTATGCTAA+AGG 0.587455 4.1:+22080581 None:intergenic
GTGCAACAAAAGTTGAGGGA+AGG 0.588950 4.1:-22081414 MS.gene26397:CDS
GCAACAAAAGTTGAGGGAAG+GGG 0.589038 4.1:-22081412 MS.gene26397:CDS
GGAATCACTGCGGTTCCAGA+AGG 0.590895 4.1:-22078795 MS.gene26397:CDS
GGCTCAACAGGGTTTCACCA+TGG 0.590908 4.1:-22079048 MS.gene26397:CDS
GATGGTGATGGTGATGGTGA+AGG 0.594977 4.1:-22081384 MS.gene26397:CDS
AGTTGCCATCAAGCTATTGG+TGG 0.596259 4.1:+22078997 None:intergenic
TAATAACAAAATTAATCCGG+TGG 0.596313 4.1:-22078360 MS.gene26397:CDS
AATTATTGGAATTACTGATG+TGG 0.597448 4.1:-22080228 MS.gene26397:CDS
TGAATCTTTCCGATTCCAGA+AGG 0.600033 4.1:-22078588 MS.gene26397:CDS
CAATCTTCGGCTGCTCGACG+AGG 0.600698 4.1:+22081264 None:intergenic
TTAGCATACACTACAATCCA+AGG 0.602455 4.1:-22080578 MS.gene26397:intron
AGATGTTCCAAGTGTCCTTG+AGG 0.604919 4.1:+22082290 None:intergenic
ACACGACAGAACACATGAGA+AGG 0.606315 4.1:+22082233 None:intergenic
GTATTTGTGCAGGCTGAGGA+AGG 0.606600 4.1:-22081833 MS.gene26397:intron
TGATGGCAACTAGTTTGAAG+AGG 0.608820 4.1:-22078985 MS.gene26397:CDS
TGCCAAGATCCACAAATGGA+TGG 0.610246 4.1:-22078457 MS.gene26397:CDS
ATCCCGGGATAGGTTGAACC+GGG 0.611784 4.1:+22078677 None:intergenic
CGGTTCCAGAAGGTCTTGCA+AGG 0.612560 4.1:-22078785 MS.gene26397:CDS
AGGCCTATTAGTTGGCGTTG+AGG 0.614103 4.1:+22078277 None:intergenic
AATTGGGACATCAGACTTTG+GGG 0.617990 4.1:-22078816 MS.gene26397:CDS
AAGACCTTCACAAGAGCTTG+TGG 0.618685 4.1:-22081065 MS.gene26397:CDS
ATTGAGATTGGGAATCCGCA+GGG 0.619618 4.1:-22080706 MS.gene26397:CDS
ACATGTCTTGTGAAGGAGGG+AGG 0.622871 4.1:+22078050 None:intergenic
TCAACATGTCTTGTGAAGGA+GGG 0.630253 4.1:+22078047 None:intergenic
TGTCTTCATGAGCTGGCCCG+CGG 0.635316 4.1:+22078249 None:intergenic
TTGTGGATCTTGGCACCTGG+TGG 0.639384 4.1:+22078465 None:intergenic
GGAAGCTTCAAGGCTCAACA+GGG 0.640992 4.1:-22079059 MS.gene26397:CDS
TTGGTTGCACTACAGAGAAG+CGG 0.648720 4.1:-22078197 MS.gene26397:CDS
TCTGTAATTCAGATAACTGG+TGG 0.650832 4.1:+22078708 None:intergenic
AAGTTTCGGCATATATACAG+AGG 0.654829 4.1:-22081016 MS.gene26397:intron
GAAGGGGTAATTGATGGTGA+TGG 0.656136 4.1:-22081396 MS.gene26397:CDS
AGAGTCTTGCAGAACATGTG+AGG 0.659565 4.1:+22081327 None:intergenic
GTTGTTGGTTCCTGAAAGTG+AGG 0.660598 4.1:-22081786 MS.gene26397:intron
ATCAAAATGGAAATGCCTAG+TGG 0.661824 4.1:-22080186 MS.gene26397:intron
GTACCAGCAAGCGTCAACCA+TGG 0.662349 4.1:-22078387 MS.gene26397:CDS
TGATGGTGATGGTGAAGGAG+AGG 0.663407 4.1:-22081379 MS.gene26397:CDS
GATTGATCTCAACACTACTG+AGG 0.665345 4.1:-22082474 MS.gene26397:CDS
GAGGATAACGTCCTTCAAAG+AGG 0.666492 4.1:-22078338 MS.gene26397:CDS
CTCAAGGTAAGTACCAGGGG+AGG 0.666901 4.1:+22081237 None:intergenic
GGTGGTGGAAGATGAGCCTG+AGG 0.683472 4.1:+22079015 None:intergenic
TATTTGTGCAGGCTGAGGAA+GGG 0.684256 4.1:-22081832 MS.gene26397:intron
TATCTGGCAAGTGACTGCAG+AGG 0.699849 4.1:+22078082 None:intergenic
ACCAGTTATCTGAATTACAG+AGG 0.702085 4.1:-22078706 MS.gene26397:CDS
CTTGTGGCAAAGGACCTGCA+CGG 0.708055 4.1:-22081049 MS.gene26397:CDS
GGCTGAGGAAGGGAACGATG+AGG 0.721717 4.1:-22081822 MS.gene26397:CDS
CAGACTTTGGGGAATCACTG+CGG 0.730858 4.1:-22078805 MS.gene26397:CDS
TCTGATACTAGCACTCATGG+TGG 0.734262 4.1:-22081297 MS.gene26397:CDS
GTGGTGGAAGATGAGCCTGA+GGG 0.740646 4.1:+22079016 None:intergenic
GCATTCACTTCGGAGCAAGG+CGG 0.745305 4.1:-22078006 MS.gene26397:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATAACAAAATTAATC+CGG - chr4.1:22082057-22082076 MS.gene26397:intron 10.0%
!!! TCTCAATTTATTTATTTTTT+TGG - chr4.1:22081509-22081528 MS.gene26397:intron 10.0%
!! TCTACTAATTAATCTATAAA+AGG - chr4.1:22081172-22081191 MS.gene26397:intron 15.0%
!! TTTATTGAAAATAGAATATC+AGG + chr4.1:22080453-22080472 None:intergenic 15.0%
!!! AATTTTGTTATTATAATCCA+TGG + chr4.1:22082053-22082072 None:intergenic 15.0%
!! AAAACTTTCAAAATTGAACA+AGG + chr4.1:22079232-22079251 None:intergenic 20.0%
!! AAACAATATGAAGTGAAATA+TGG + chr4.1:22081060-22081079 None:intergenic 20.0%
!! AAACTTTCAAAATTGAACAA+GGG + chr4.1:22079231-22079250 None:intergenic 20.0%
!! AAATAATTCCATTATTGAAC+TGG - chr4.1:22080665-22080684 MS.gene26397:CDS 20.0%
!! ACTTAACATAGGAAAAAATT+TGG - chr4.1:22081019-22081038 MS.gene26397:CDS 20.0%
!! ATAAATAAATTGAGACATAC+TGG + chr4.1:22081504-22081523 None:intergenic 20.0%
!! ATATTATCCGAAAAAGATAA+CGG + chr4.1:22078166-22078185 None:intergenic 20.0%
!! ATCATTTATATGCTTGAAAT+TGG - chr4.1:22080296-22080315 MS.gene26397:intron 20.0%
!! GATTAAGATTCTCTTAAATA+AGG + chr4.1:22080140-22080159 None:intergenic 20.0%
!! TAAATAAATTGAGACATACT+GGG + chr4.1:22081503-22081522 None:intergenic 20.0%
!! TCATTTATATGCTTGAAATT+GGG - chr4.1:22080297-22080316 MS.gene26397:intron 20.0%
!! TTCATTATAATCATCTCAAA+TGG + chr4.1:22078794-22078813 None:intergenic 20.0%
!!! AAAAGAAACCAAATTTTAGA+AGG + chr4.1:22078342-22078361 None:intergenic 20.0%
!!! AAACTTACCTTATTTACTAT+TGG + chr4.1:22080903-22080922 None:intergenic 20.0%
!!! ACTTGTTTCTCATTTTTATA+AGG - chr4.1:22079433-22079452 MS.gene26397:intron 20.0%
!!! ACTTTTTTCCTTCTAAAATT+TGG - chr4.1:22078331-22078350 MS.gene26397:CDS 20.0%
!!! ATTTTTTTTTGTCAATGTTG+TGG - chr4.1:22080388-22080407 MS.gene26397:CDS 20.0%
!!! CTAAAATTTGGTTTCTTTTT+GGG - chr4.1:22078343-22078362 MS.gene26397:CDS 20.0%
!!! TAAATGTTTTGATAGAATGT+AGG + chr4.1:22079627-22079646 None:intergenic 20.0%
!!! TCTAAAATTTGGTTTCTTTT+TGG - chr4.1:22078342-22078361 MS.gene26397:CDS 20.0%
!!! TTTCAATAAAATTTTGCAGA+CGG - chr4.1:22080463-22080482 MS.gene26397:intron 20.0%
! AAACATCAGAATTCATTTGT+GGG + chr4.1:22081796-22081815 None:intergenic 25.0%
! AACATTTACATAGAGTAACA+AGG - chr4.1:22079639-22079658 MS.gene26397:intron 25.0%
! AAGCATTAACTATGTCTTTA+AGG + chr4.1:22079804-22079823 None:intergenic 25.0%
! AATTATTGGAATTACTGATG+TGG - chr4.1:22080192-22080211 MS.gene26397:CDS 25.0%
! CACTAATATGTATAGTTAGA+TGG + chr4.1:22080569-22080588 None:intergenic 25.0%
! CAGATTGATAAATGTAATGA+TGG + chr4.1:22080951-22080970 None:intergenic 25.0%
! CATCTAACTATACATATTAG+TGG - chr4.1:22080567-22080586 MS.gene26397:intron 25.0%
! CATTACACCAATAGTAAATA+AGG - chr4.1:22080893-22080912 MS.gene26397:CDS 25.0%
! CTTATATATGATAAATCCAC+AGG + chr4.1:22080363-22080382 None:intergenic 25.0%
! GAAAATTGTAGAAACTTACA+TGG - chr4.1:22080701-22080720 MS.gene26397:CDS 25.0%
! TAATAACAAAATTAATCCGG+TGG - chr4.1:22082060-22082079 MS.gene26397:intron 25.0%
! TAGAATACCAATTGATTGTT+GGG - chr4.1:22079472-22079491 MS.gene26397:intron 25.0%
! TATGAAGTGAAATATGGTAT+TGG + chr4.1:22081054-22081073 None:intergenic 25.0%
! TGTACACTCAATTAATTAGA+GGG + chr4.1:22080861-22080880 None:intergenic 25.0%
!! AATCGAATGTTGTCTTTTAT+TGG - chr4.1:22078264-22078283 MS.gene26397:CDS 25.0%
!! AATTAATTAGAGGGTACAAT+TGG + chr4.1:22080852-22080871 None:intergenic 25.0%
!! AGTAACTTTTCATCTATCTT+TGG - chr4.1:22079757-22079776 MS.gene26397:intron 25.0%
!! TGATTTTCCGTTATCTTTTT+CGG - chr4.1:22078156-22078175 MS.gene26397:CDS 25.0%
!! TTACTATTGGTGTAATGTTT+TGG + chr4.1:22080890-22080909 None:intergenic 25.0%
!! TTACTATTTCTTTGTAGGAT+TGG - chr4.1:22079965-22079984 MS.gene26397:intron 25.0%
!!! AACTGATTTTTGAATGAACT+TGG - chr4.1:22078967-22078986 MS.gene26397:CDS 25.0%
!!! AAGTGACACTTATTTTGAAA+CGG + chr4.1:22080761-22080780 None:intergenic 25.0%
!!! TACAATCCAAGGTATTTTTA+TGG - chr4.1:22079853-22079872 MS.gene26397:intron 25.0%
!!! TGCTTTTACTATTTCTTTGT+AGG - chr4.1:22079960-22079979 MS.gene26397:intron 25.0%
!!! TTTTTGAGTGAAACTTGTTA+TGG - chr4.1:22078523-22078542 MS.gene26397:CDS 25.0%
!!! TTTTTTAGTAGTTCGTGAAA+GGG - chr4.1:22079891-22079910 MS.gene26397:intron 25.0%
AACAAGAAGAAACTTGTATC+TGG - chr4.1:22079571-22079590 MS.gene26397:intron 30.0%
AATAGTCCTTCTCATTCTAA+AGG + chr4.1:22080637-22080656 None:intergenic 30.0%
AGATTCACAGGACTAATTAT+TGG - chr4.1:22080178-22080197 MS.gene26397:intron 30.0%
AGGATGAATATTGCTTACTT+TGG + chr4.1:22082455-22082474 None:intergenic 30.0%
ATACAAACCCAACAATCAAT+TGG + chr4.1:22079482-22079501 None:intergenic 30.0%
ATCTATGTTAGTGTCAAGTT+TGG - chr4.1:22078416-22078435 MS.gene26397:CDS 30.0%
ATTGACTGATTGCAATCAAA+TGG - chr4.1:22081303-22081322 MS.gene26397:CDS 30.0%
ATTTAATCCACTTCCTCTTT+AGG - chr4.1:22079319-22079338 MS.gene26397:intron 30.0%
CAACTGAGTAAGAATAATCA+AGG + chr4.1:22080033-22080052 None:intergenic 30.0%
CAAGTAGTAATGAGGTTAAT+AGG + chr4.1:22081259-22081278 None:intergenic 30.0%
CAGGCTATATAATAAAACGA+CGG + chr4.1:22080507-22080526 None:intergenic 30.0%
CCTAATAAACGAAGTTAGAA+AGG + chr4.1:22080273-22080292 None:intergenic 30.0%
CCTTTCTAACTTCGTTTATT+AGG - chr4.1:22080270-22080289 MS.gene26397:intron 30.0%
CTGTGAATCTGCATAATAAA+AGG + chr4.1:22080168-22080187 None:intergenic 30.0%
CTTGATTATTCTTACTCAGT+TGG - chr4.1:22080031-22080050 MS.gene26397:intron 30.0%
GAAACATCAGAATTCATTTG+TGG + chr4.1:22081797-22081816 None:intergenic 30.0%
GAATAGCCATAAAAATACCT+TGG + chr4.1:22079862-22079881 None:intergenic 30.0%
GTAGAATACCAATTGATTGT+TGG - chr4.1:22079471-22079490 MS.gene26397:intron 30.0%
GTGTACACTCAATTAATTAG+AGG + chr4.1:22080862-22080881 None:intergenic 30.0%
GTTAAGTGTCATATTACCAA+AGG - chr4.1:22078832-22078851 MS.gene26397:intron 30.0%
TATAAGGACAAGAACATTTC+AGG - chr4.1:22079449-22079468 MS.gene26397:intron 30.0%
TCATCTTCAAGTACAAGTAT+AGG - chr4.1:22077992-22078011 MS.gene26397:CDS 30.0%
TGTCGCGAAATATAAAATGT+CGG + chr4.1:22079671-22079690 None:intergenic 30.0%
TTATTATATAGCCTGCACTT+AGG - chr4.1:22080512-22080531 MS.gene26397:intron 30.0%
TTGAAGATGATTTCAATCCA+AGG - chr4.1:22082392-22082411 MS.gene26397:CDS 30.0%
! AATGTTGTCTTTTATTGGTC+GGG - chr4.1:22078269-22078288 MS.gene26397:CDS 30.0%
! ATTTCTCATCATTTCAGGTA+AGG - chr4.1:22081327-22081346 MS.gene26397:CDS 30.0%
! CTCTTTAAGAATTTGTGGAT+AGG + chr4.1:22080010-22080029 None:intergenic 30.0%
! CTTGAAGTAACTCAAGTTTT+TGG - chr4.1:22081107-22081126 MS.gene26397:intron 30.0%
! CTTTTATTATGCAGATTCAC+AGG - chr4.1:22080166-22080185 MS.gene26397:intron 30.0%
! GAATGTTGTCTTTTATTGGT+CGG - chr4.1:22078268-22078287 MS.gene26397:CDS 30.0%
! GATTGTTGGGTTTGTATTTT+CGG - chr4.1:22079485-22079504 MS.gene26397:intron 30.0%
! TCTGCATCTTTATTTGCAAT+GGG + chr4.1:22082316-22082335 None:intergenic 30.0%
! TTCTGCATCTTTATTTGCAA+TGG + chr4.1:22082317-22082336 None:intergenic 30.0%
! TTGCAAGGTCAAGAAATTTT+AGG - chr4.1:22081650-22081669 MS.gene26397:intron 30.0%
!! AAGGGAGTATTACTTAACAT+AGG - chr4.1:22081008-22081027 MS.gene26397:intron 30.0%
!! TATGCTTCTGAAATGAAAGA+TGG - chr4.1:22082112-22082131 MS.gene26397:intron 30.0%
!! TGTATTCCTTTAGAATGAGA+AGG - chr4.1:22080628-22080647 MS.gene26397:CDS 30.0%
!! TTCAAAATGAGTGTCGTTTA+AGG + chr4.1:22080984-22081003 None:intergenic 30.0%
!!! ACACTCATTTTGAAACAGAA+GGG - chr4.1:22080990-22081009 MS.gene26397:intron 30.0%
!!! CTTTTTGGGTTTTTACATGT+GGG - chr4.1:22078357-22078376 MS.gene26397:CDS 30.0%
!!! GTTTTTTAGTAGTTCGTGAA+AGG - chr4.1:22079890-22079909 MS.gene26397:intron 30.0%
!!! TCTTTTTGGGTTTTTACATG+TGG - chr4.1:22078356-22078375 MS.gene26397:CDS 30.0%
!!! TTTGGTTTTTCATTAACCGA+GGG - chr4.1:22082286-22082305 MS.gene26397:CDS 30.0%
!!! TTTTTGGTTCAGTTCTGTTT+TGG - chr4.1:22078686-22078705 MS.gene26397:CDS 30.0%
AAGTTTCGGCATATATACAG+AGG - chr4.1:22079404-22079423 MS.gene26397:intron 35.0%
AATTCTACCTGTTAGAGGAA+TGG + chr4.1:22081588-22081607 None:intergenic 35.0%
AATTCTGATGTTTCCTGCAA+TGG - chr4.1:22081803-22081822 MS.gene26397:CDS 35.0%
ACAACAACACTTCCTTTCTT+TGG + chr4.1:22078103-22078122 None:intergenic 35.0%
ACCACAAACAAGTAGTAATG+AGG + chr4.1:22081267-22081286 None:intergenic 35.0%
ACCAGTTATCTGAATTACAG+AGG - chr4.1:22081714-22081733 MS.gene26397:intron 35.0%
ACCTCATTACTACTTGTTTG+TGG - chr4.1:22081263-22081282 MS.gene26397:CDS 35.0%
ACCTCTGTAATTCAGATAAC+TGG + chr4.1:22081718-22081737 None:intergenic 35.0%
AGTACAAGTATAGGTAGTGT+TGG - chr4.1:22078001-22078020 MS.gene26397:CDS 35.0%
ATCAAAATGGAAATGCCTAG+TGG - chr4.1:22080234-22080253 MS.gene26397:CDS 35.0%
ATCTTCAACATGTCTTGTGA+AGG + chr4.1:22082380-22082399 None:intergenic 35.0%
ATGATCTCTTTGCCAAAGAA+AGG - chr4.1:22078088-22078107 MS.gene26397:CDS 35.0%
ATGGCATTTCTCATCATTTC+AGG - chr4.1:22081322-22081341 MS.gene26397:CDS 35.0%
ATTCCTCTAACAGGTAGAAT+TGG - chr4.1:22081587-22081606 MS.gene26397:intron 35.0%
ATTCTTACTCAGTTGGAATG+AGG - chr4.1:22080038-22080057 MS.gene26397:intron 35.0%
ATTTCAAAGTAGCACACTCA+AGG + chr4.1:22079202-22079221 None:intergenic 35.0%
CATAGAATGTGTATTTGTGC+AGG - chr4.1:22078577-22078596 MS.gene26397:CDS 35.0%
CCATAAAGCCAGTTCAATAA+TGG + chr4.1:22080676-22080695 None:intergenic 35.0%
CCATAGTACTAAGTAGCTAT+AGG - chr4.1:22078864-22078883 MS.gene26397:intron 35.0%
CCTATAGCTACTTAGTACTA+TGG + chr4.1:22078867-22078886 None:intergenic 35.0%
CGTAAAGTATAGACAATGTC+AGG + chr4.1:22081085-22081104 None:intergenic 35.0%
GATTTGTACGCTGAAAAGAA+GGG + chr4.1:22078248-22078267 None:intergenic 35.0%
TAACAAAATTAATCCGGTGG+AGG - chr4.1:22082063-22082082 MS.gene26397:intron 35.0%
TACTCAGTGTCTAAGTCTTA+GGG - chr4.1:22078757-22078776 MS.gene26397:CDS 35.0%
TAGAATGTAGGTCATCTTAC+CGG + chr4.1:22079615-22079634 None:intergenic 35.0%
TATAGTTAGATGGAAGACAG+AGG + chr4.1:22080559-22080578 None:intergenic 35.0%
TATGCTTGAAATTGGGTGTT+AGG - chr4.1:22080304-22080323 MS.gene26397:intron 35.0%
TCTGTAATTCAGATAACTGG+TGG + chr4.1:22081715-22081734 None:intergenic 35.0%
TGCTCAATGAGGAAATTGAT+GGG - chr4.1:22078387-22078406 MS.gene26397:CDS 35.0%
TGGATTGTAGTGTATGCTAA+AGG + chr4.1:22079842-22079861 None:intergenic 35.0%
TGTTGAGAGTAATCCTAAAG+AGG + chr4.1:22079335-22079354 None:intergenic 35.0%
TTACTCAGTGTCTAAGTCTT+AGG - chr4.1:22078756-22078775 MS.gene26397:CDS 35.0%
TTAGCATACACTACAATCCA+AGG - chr4.1:22079842-22079861 MS.gene26397:intron 35.0%
TTCATCAAAGCTAGAGTTTC+CGG - chr4.1:22081475-22081494 MS.gene26397:intron 35.0%
TTCCTCTAACAGGTAGAATT+GGG - chr4.1:22081588-22081607 MS.gene26397:intron 35.0%
TTCGGTTTCTAATAAACGCA+GGG - chr4.1:22079503-22079522 MS.gene26397:intron 35.0%
TTCTTTGGCAAAGAGATCAT+AGG + chr4.1:22078088-22078107 None:intergenic 35.0%
TTGCTCAATGAGGAAATTGA+TGG - chr4.1:22078386-22078405 MS.gene26397:CDS 35.0%
TTTCGGTTTCTAATAAACGC+AGG - chr4.1:22079502-22079521 MS.gene26397:intron 35.0%
! CAAGGCTCTTTAAGAATTTG+TGG + chr4.1:22080015-22080034 None:intergenic 35.0%
!! CCATTATTGAACTGGCTTTA+TGG - chr4.1:22080673-22080692 MS.gene26397:CDS 35.0%
!! GAGTGAAACTTGTTATGGTT+TGG - chr4.1:22078528-22078547 MS.gene26397:CDS 35.0%
!! GTTGCACTTGCTATAAAAAG+TGG + chr4.1:22078993-22079012 None:intergenic 35.0%
!! TTCTGGTTCTTCTGTTTGTT+TGG - chr4.1:22078039-22078058 MS.gene26397:CDS 35.0%
!! TTGATTGCATTTGCTGTTCA+TGG - chr4.1:22081218-22081237 MS.gene26397:intron 35.0%
!!! GACACTCATTTTGAAACAGA+AGG - chr4.1:22080989-22081008 MS.gene26397:intron 35.0%
!!! GACACTTATTTTGAAACGGA+GGG + chr4.1:22080757-22080776 None:intergenic 35.0%
!!! GTTTGGTTTTTCATTAACCG+AGG - chr4.1:22082285-22082304 MS.gene26397:CDS 35.0%
!!! TGACACTTATTTTGAAACGG+AGG + chr4.1:22080758-22080777 None:intergenic 35.0%
AAAAGGCTTGTCCATATGGT+TGG + chr4.1:22081886-22081905 None:intergenic 40.0%
AATTGAGACATACTGGGAAC+CGG + chr4.1:22081497-22081516 None:intergenic 40.0%
AATTGCTCCATTCCTCTAAC+AGG - chr4.1:22081578-22081597 MS.gene26397:intron 40.0%
AATTGGGACATCAGACTTTG+GGG - chr4.1:22081604-22081623 MS.gene26397:intron 40.0%
ACAATTGACAGAGGAGAAGA+TGG - chr4.1:22079688-22079707 MS.gene26397:intron 40.0%
ACAGAAAAGGCTTGTCCATA+TGG + chr4.1:22081890-22081909 None:intergenic 40.0%
ACAGTAGTACAGAACTCCTA+CGG + chr4.1:22080606-22080625 None:intergenic 40.0%
ACTAGTTGCCATCAAGCTAT+TGG + chr4.1:22081429-22081448 None:intergenic 40.0%
ACTATGGTCTATGACTCCTT+TGG + chr4.1:22078851-22078870 None:intergenic 40.0%
ACTCAGTGTCTAAGTCTTAG+GGG - chr4.1:22078758-22078777 MS.gene26397:CDS 40.0%
AGAAGATGGCGAATTGAGAT+TGG - chr4.1:22079702-22079721 MS.gene26397:intron 40.0%
AGAATTGGGACATCAGACTT+TGG - chr4.1:22081602-22081621 MS.gene26397:intron 40.0%
AGCAAGTGCAACAAAAGTTG+AGG - chr4.1:22079001-22079020 MS.gene26397:CDS 40.0%
ATACTTCCTAGCCAACCATA+TGG - chr4.1:22081872-22081891 MS.gene26397:intron 40.0%
CAATGACGTTTCATTGCATG+AGG + chr4.1:22081555-22081574 None:intergenic 40.0%
CATAGAACGAACCTCTTTGA+AGG + chr4.1:22082096-22082115 None:intergenic 40.0%
CATGAAGACATGAACTCGTT+TGG - chr4.1:22082184-22082203 MS.gene26397:intron 40.0%
CGATTTGTACGCTGAAAAGA+AGG + chr4.1:22078249-22078268 None:intergenic 40.0%
CGGAAAATAGGCCTATTAGT+TGG + chr4.1:22082154-22082173 None:intergenic 40.0%
CTTGAAGATGAACCAGAAGA+AGG + chr4.1:22077983-22078002 None:intergenic 40.0%
GAAGATGAAACACCTTCTTC+TGG - chr4.1:22077968-22077987 MS.gene26397:CDS 40.0%
GAAGATGGCGAATTGAGATT+GGG - chr4.1:22079703-22079722 MS.gene26397:intron 40.0%
GAATTGGGACATCAGACTTT+GGG - chr4.1:22081603-22081622 MS.gene26397:intron 40.0%
GAGTAATCCTAAAGAGGAAG+TGG + chr4.1:22079329-22079348 None:intergenic 40.0%
GATTGATCTCAACACTACTG+AGG - chr4.1:22077946-22077965 MS.gene26397:CDS 40.0%
GCAAGTGCAACAAAAGTTGA+GGG - chr4.1:22079002-22079021 MS.gene26397:CDS 40.0%
GTAGCACTCTAGTGTTCAAA+AGG + chr4.1:22078920-22078939 None:intergenic 40.0%
GTTAGTGTCAAGTTTGGCAT+AGG - chr4.1:22078422-22078441 MS.gene26397:CDS 40.0%
TATTTCGCGACAATTGACAG+AGG - chr4.1:22079679-22079698 MS.gene26397:intron 40.0%
TCAACATGTCTTGTGAAGGA+GGG + chr4.1:22082376-22082395 None:intergenic 40.0%
TCGATAATCATGTCTCTCAC+AGG + chr4.1:22082475-22082494 None:intergenic 40.0%
TCTTCAAACATGCACACGAA+TGG + chr4.1:22081198-22081217 None:intergenic 40.0%
TGAAATTGGGTGTTAGGAGA+TGG - chr4.1:22080310-22080329 MS.gene26397:intron 40.0%
TGAATCTTTCCGATTCCAGA+AGG - chr4.1:22081832-22081851 MS.gene26397:intron 40.0%
TGCAACAAAAGTTGAGGGAA+GGG - chr4.1:22079007-22079026 MS.gene26397:CDS 40.0%
TTAGATGGCCTGGATCAAAA+TGG - chr4.1:22080221-22080240 MS.gene26397:CDS 40.0%
TTCAACATGTCTTGTGAAGG+AGG + chr4.1:22082377-22082396 None:intergenic 40.0%
TTTGGCCAGCAATTGAATCT+TGG - chr4.1:22079775-22079794 MS.gene26397:intron 40.0%
! AAAAGTAGCTGCAGAGTGTT+TGG - chr4.1:22082268-22082287 MS.gene26397:CDS 40.0%
! AATGCCTAGTGGTATTTTGC+TGG - chr4.1:22080245-22080264 MS.gene26397:intron 40.0%
! ACTAATAGGCCTATTTTCCG+CGG - chr4.1:22082154-22082173 MS.gene26397:intron 40.0%
! AGTAGCTTAAGAAGTACGCT+CGG - chr4.1:22081139-22081158 MS.gene26397:intron 40.0%
! ATGCCTAGTGGTATTTTGCT+GGG - chr4.1:22080246-22080265 MS.gene26397:intron 40.0%
! CTCATCATTTCAGGTAAGGT+GGG - chr4.1:22081331-22081350 MS.gene26397:CDS 40.0%
! CTTCTGTTTGTTTGGAGCTA+TGG - chr4.1:22078047-22078066 MS.gene26397:CDS 40.0%
! TCAATCCAAGGCATTCACTT+CGG - chr4.1:22082404-22082423 MS.gene26397:CDS 40.0%
! TCTCATCATTTCAGGTAAGG+TGG - chr4.1:22081330-22081349 MS.gene26397:CDS 40.0%
! TGATGGCAACTAGTTTGAAG+AGG - chr4.1:22081435-22081454 MS.gene26397:intron 40.0%
!! AGGCATTTCCATTTTGATCC+AGG + chr4.1:22080232-22080251 None:intergenic 40.0%
!! GGAAACTCTAGCTTTGATGA+AGG + chr4.1:22081476-22081495 None:intergenic 40.0%
!! GTAATTGATGGTGATGGTGA+TGG - chr4.1:22079030-22079049 MS.gene26397:CDS 40.0%
!! GTTGTTGTTTACTTCCCTCA+AGG - chr4.1:22078115-22078134 MS.gene26397:CDS 40.0%
!! TTTGGAGAGAGTGCTGAAAA+TGG - chr4.1:22078704-22078723 MS.gene26397:CDS 40.0%
!! TTTTTAATTGAGCTGCCCTG+CGG + chr4.1:22079732-22079751 None:intergenic 40.0%
!!! TCTGCAGCTACTTTTACATG+TGG + chr4.1:22082263-22082282 None:intergenic 40.0%
!!! TGGGTTTTGTTTGCTCAATG+AGG - chr4.1:22078376-22078395 MS.gene26397:CDS 40.0%
AAGACCTTCACAAGAGCTTG+TGG - chr4.1:22079355-22079374 MS.gene26397:intron 45.0%
AATGTAGGTCATCTTACCGG+AGG + chr4.1:22079612-22079631 None:intergenic 45.0%
AATTGAGATTGGGAATCCGC+AGG - chr4.1:22079713-22079732 MS.gene26397:intron 45.0%
ACAAGCCTCGTTGACAGAAA+AGG + chr4.1:22081903-22081922 None:intergenic 45.0%
ACAAGTCTCACCTCACTTTC+AGG + chr4.1:22078647-22078666 None:intergenic 45.0%
ACACGACAGAACACATGAGA+AGG + chr4.1:22078190-22078209 None:intergenic 45.0%
ACACTCAAGGTAAGTACCAG+GGG + chr4.1:22079189-22079208 None:intergenic 45.0%
ACTCAGTTGGAATGAGGTTC+AGG - chr4.1:22080044-22080063 MS.gene26397:intron 45.0%
AGAGTCTTGCAGAACATGTG+AGG + chr4.1:22079096-22079115 None:intergenic 45.0%
AGATGTTCCAAGTGTCCTTG+AGG + chr4.1:22078133-22078152 None:intergenic 45.0%
AGATTCACCAAAGCCATTGC+AGG + chr4.1:22081819-22081838 None:intergenic 45.0%
AGTTGCCATCAAGCTATTGG+TGG + chr4.1:22081426-22081445 None:intergenic 45.0%
AGTTTGAAGAGGACCAAGAC+TGG - chr4.1:22081446-22081465 MS.gene26397:intron 45.0%
ATGTGTATTTGTGCAGGCTG+AGG - chr4.1:22078583-22078602 MS.gene26397:CDS 45.0%
ATTGAGATTGGGAATCCGCA+GGG - chr4.1:22079714-22079733 MS.gene26397:intron 45.0%
CACACTCAAGGTAAGTACCA+GGG + chr4.1:22079190-22079209 None:intergenic 45.0%
CACAGGAGTTTCCTTAACTG+CGG + chr4.1:22080346-22080365 None:intergenic 45.0%
CAGAGAAGACCATCCATTTG+TGG + chr4.1:22081975-22081994 None:intergenic 45.0%
CCTGTGTCATCCTGTCATAT+GGG - chr4.1:22080420-22080439 MS.gene26397:CDS 45.0%
CTGATGTGGATCCTGTTAGA+TGG - chr4.1:22080206-22080225 MS.gene26397:CDS 45.0%
CTGTGTCATCCTGTCATATG+GGG - chr4.1:22080421-22080440 MS.gene26397:CDS 45.0%
GAACGATGAGGTGTATTGTC+AGG - chr4.1:22078610-22078629 MS.gene26397:CDS 45.0%
GACCATCCATTTGTGGATCT+TGG + chr4.1:22081968-22081987 None:intergenic 45.0%
GAGGATAACGTCCTTCAAAG+AGG - chr4.1:22082082-22082101 MS.gene26397:intron 45.0%
GAGTTCATGTCTTCATGAGC+TGG + chr4.1:22082181-22082200 None:intergenic 45.0%
GATGTTCCAAGTGTCCTTGA+GGG + chr4.1:22078132-22078151 None:intergenic 45.0%
GATGTTTCCTGCAATGGCTT+TGG - chr4.1:22081809-22081828 MS.gene26397:CDS 45.0%
GCAACAAAAGTTGAGGGAAG+GGG - chr4.1:22079008-22079027 MS.gene26397:CDS 45.0%
GCTTCTGATACTAGCACTCA+TGG - chr4.1:22079120-22079139 MS.gene26397:intron 45.0%
GGCTACCAAGATTCAATTGC+TGG + chr4.1:22079783-22079802 None:intergenic 45.0%
GTCAACGAGGCTTGTAGAAA+TGG - chr4.1:22081908-22081927 MS.gene26397:intron 45.0%
GTCACTTGCCAGATAAATCC+TGG - chr4.1:22082346-22082365 MS.gene26397:CDS 45.0%
GTCCCAATTCTACCTGTTAG+AGG + chr4.1:22081593-22081612 None:intergenic 45.0%
GTGCAACAAAAGTTGAGGGA+AGG - chr4.1:22079006-22079025 MS.gene26397:CDS 45.0%
TAACACAAGCACCTAAGTGC+AGG + chr4.1:22080526-22080545 None:intergenic 45.0%
TATGCCGAAACTTCCATTCC+TGG + chr4.1:22079397-22079416 None:intergenic 45.0%
TATTTGTGCAGGCTGAGGAA+GGG - chr4.1:22078588-22078607 MS.gene26397:CDS 45.0%
TCTGATACTAGCACTCATGG+TGG - chr4.1:22079123-22079142 MS.gene26397:intron 45.0%
TGATGAAGGCAATCCAGTCT+TGG + chr4.1:22081462-22081481 None:intergenic 45.0%
TGCCAAGATCCACAAATGGA+TGG - chr4.1:22081963-22081982 MS.gene26397:intron 45.0%
TGCTGGTACATCAACACTGA+TGG + chr4.1:22082022-22082041 None:intergenic 45.0%
TGGCACACTTTCAAAACCGT+AGG - chr4.1:22080587-22080606 MS.gene26397:CDS 45.0%
TGGTACACATTCACGCGATT+TGG - chr4.1:22082204-22082223 MS.gene26397:intron 45.0%
TTACTTCCCTCAAGGACACT+TGG - chr4.1:22078123-22078142 MS.gene26397:CDS 45.0%
TTCACAAGAGCTTGTGGCAA+AGG - chr4.1:22079361-22079380 MS.gene26397:intron 45.0%
TTCCACCACCAATAGCTTGA+TGG - chr4.1:22081418-22081437 MS.gene26397:CDS 45.0%
TTGAGGGAAGGGGTAATTGA+TGG - chr4.1:22079018-22079037 MS.gene26397:CDS 45.0%
TTGGTTGCACTACAGAGAAG+CGG - chr4.1:22082223-22082242 MS.gene26397:CDS 45.0%
TTTGATCCAGGCCATCTAAC+AGG + chr4.1:22080220-22080239 None:intergenic 45.0%
TTTGCCACAAGCTCTTGTGA+AGG + chr4.1:22079362-22079381 None:intergenic 45.0%
! ACAAGCCTTTTCTGTCAACG+AGG - chr4.1:22081895-22081914 MS.gene26397:intron 45.0%
! CTAATAGGCCTATTTTCCGC+GGG - chr4.1:22082155-22082174 MS.gene26397:intron 45.0%
! GGTGTATTGTCAGGTGTTGT+TGG - chr4.1:22078619-22078638 MS.gene26397:CDS 45.0%
!! ACTTTTTGATGGTCACCACC+AGG - chr4.1:22081940-22081959 MS.gene26397:intron 45.0%
!! ATAGGTAGTGTTGGTGCTGT+TGG - chr4.1:22078010-22078029 MS.gene26397:CDS 45.0%
!! CTTGCAAGACCTTCTGGAAT+CGG + chr4.1:22081844-22081863 None:intergenic 45.0%
!! GAAGGGGTAATTGATGGTGA+TGG - chr4.1:22079024-22079043 MS.gene26397:CDS 45.0%
!! GAATTACAGAGGTGCTATCC+CGG - chr4.1:22081725-22081744 MS.gene26397:intron 45.0%
!! GTTGTTGGTTCCTGAAAGTG+AGG - chr4.1:22078634-22078653 MS.gene26397:CDS 45.0%
!!! TGTTTTTTTTTTTTTTTTTT+TGG - chr4.1:22078670-22078689 MS.gene26397:CDS 5.0%
AATCCATGGTTGACGCTTGC+TGG + chr4.1:22082039-22082058 None:intergenic 50.0%
ACAGAGAAGCGGTCAAGAGT+TGG - chr4.1:22082234-22082253 MS.gene26397:CDS 50.0%
ACATGTCTTGTGAAGGAGGG+AGG + chr4.1:22082373-22082392 None:intergenic 50.0%
ACGGCCAGGAATGGAAGTTT+CGG - chr4.1:22079390-22079409 MS.gene26397:intron 50.0%
AGGCCTATTAGTTGGCGTTG+AGG + chr4.1:22082146-22082165 None:intergenic 50.0%
AGGCTTCAACCCCATATGAC+AGG + chr4.1:22080433-22080452 None:intergenic 50.0%
AGGGAGGTCCAGGATTTATC+TGG + chr4.1:22082357-22082376 None:intergenic 50.0%
ATCTGGCAAGTGACTGCAGA+GGG + chr4.1:22082340-22082359 None:intergenic 50.0%
CAGGGGAGGAAAGCAATCTT+CGG + chr4.1:22079172-22079191 None:intergenic 50.0%
CAGGTGCCAAGATCCACAAA+TGG - chr4.1:22081959-22081978 MS.gene26397:intron 50.0%
CATTTGTGGATCTTGGCACC+TGG + chr4.1:22081961-22081980 None:intergenic 50.0%
CCCATATGACAGGATGACAC+AGG + chr4.1:22080423-22080442 None:intergenic 50.0%
CGATTCCAGAAGGTCTTGCA+AGG - chr4.1:22081842-22081861 MS.gene26397:intron 50.0%
CGCAGTTAAGGAAACTCCTG+TGG - chr4.1:22080344-22080363 MS.gene26397:CDS 50.0%
CTGCCTCAACGCCAACTAAT+AGG - chr4.1:22082140-22082159 MS.gene26397:intron 50.0%
CTTGACCTTGCAAGACCTTC+TGG + chr4.1:22081643-22081662 None:intergenic 50.0%
GAGATGCTGTTCTGTTCCTC+CGG - chr4.1:22079593-22079612 MS.gene26397:intron 50.0%
GCACACTCAAGGTAAGTACC+AGG + chr4.1:22079191-22079210 None:intergenic 50.0%
GCCTGTGTCATCCTGTCATA+TGG - chr4.1:22080419-22080438 MS.gene26397:CDS 50.0%
GCTCAACAGGGTTTCACCAT+GGG - chr4.1:22081373-22081392 MS.gene26397:CDS 50.0%
GCTTGTTCTGACCGCAGTTA+AGG - chr4.1:22080332-22080351 MS.gene26397:intron 50.0%
GGAAGCTTCAAGGCTCAACA+GGG - chr4.1:22081361-22081380 MS.gene26397:CDS 50.0%
GGCATTTGCTTACGACTGGA+TGG - chr4.1:22079536-22079555 MS.gene26397:intron 50.0%
GGGATGACATGGAAGCTTCA+AGG - chr4.1:22081351-22081370 MS.gene26397:CDS 50.0%
GGTCCCAGCAAAATACCACT+AGG + chr4.1:22080252-22080271 None:intergenic 50.0%
GTATTTGTGCAGGCTGAGGA+AGG - chr4.1:22078587-22078606 MS.gene26397:CDS 50.0%
GTCGTAAGCAAATGCCTTCG+TGG + chr4.1:22079532-22079551 None:intergenic 50.0%
GTTTCCTGTTGAAGCGATCC+CGG + chr4.1:22081762-22081781 None:intergenic 50.0%
TATCCCGGTTCAACCTATCC+CGG - chr4.1:22081740-22081759 MS.gene26397:intron 50.0%
TATCTGGCAAGTGACTGCAG+AGG + chr4.1:22082341-22082360 None:intergenic 50.0%
TCAGGTAAGGTGGGATGACA+TGG - chr4.1:22081340-22081359 MS.gene26397:CDS 50.0%
TGAAGGACGTTATCCTCCAC+CGG + chr4.1:22082079-22082098 None:intergenic 50.0%
TGCCATCAAGCTATTGGTGG+TGG + chr4.1:22081423-22081442 None:intergenic 50.0%
TGGAAGCTTCAAGGCTCAAC+AGG - chr4.1:22081360-22081379 MS.gene26397:CDS 50.0%
TTGCTCCGAAGTGAATGCCT+TGG + chr4.1:22082412-22082431 None:intergenic 50.0%
TTTCCTGTTGAAGCGATCCC+GGG + chr4.1:22081761-22081780 None:intergenic 50.0%
! AAGGCATTCACTTCGGAGCA+AGG - chr4.1:22082411-22082430 MS.gene26397:CDS 50.0%
! CAGACTTTGGGGAATCACTG+CGG - chr4.1:22081615-22081634 MS.gene26397:intron 50.0%
! GCTTGTCCATATGGTTGGCT+AGG + chr4.1:22081881-22081900 None:intergenic 50.0%
!! AGTGTTGGTGCTGTTGGTTC+TGG - chr4.1:22078016-22078035 MS.gene26397:CDS 50.0%
!! ATTTGCAATGGGAGCACCCT+CGG + chr4.1:22082305-22082324 None:intergenic 50.0%
!! CGAAGGCATTTGCTTACGAC+TGG - chr4.1:22079532-22079551 MS.gene26397:intron 50.0%
!! GATGGTGATGGTGATGGTGA+AGG - chr4.1:22079036-22079055 MS.gene26397:CDS 50.0%
!! TGATGGTGATGGTGAAGGAG+AGG - chr4.1:22079041-22079060 MS.gene26397:CDS 50.0%
ATCCCGGTTCAACCTATCCC+GGG - chr4.1:22081741-22081760 MS.gene26397:intron 55.0%
CGAAGATTGCTTTCCTCCCC+TGG - chr4.1:22079170-22079189 MS.gene26397:intron 55.0%
CGGTTCCAGAAGGTCTTGCA+AGG - chr4.1:22081635-22081654 MS.gene26397:intron 55.0%
CTCAAGGTAAGTACCAGGGG+AGG + chr4.1:22079186-22079205 None:intergenic 55.0%
CTGAAGATGCTGCAGAGCGA+AGG - chr4.1:22080080-22080099 MS.gene26397:intron 55.0%
CTTGTGGCAAAGGACCTGCA+CGG - chr4.1:22079371-22079390 MS.gene26397:intron 55.0%
GACAGGATGACACAGGCATG+AGG + chr4.1:22080416-22080435 None:intergenic 55.0%
GAGCTATGGCATGCTTGTGC+TGG - chr4.1:22078061-22078080 MS.gene26397:CDS 55.0%
GCATTCACTTCGGAGCAAGG+CGG - chr4.1:22082414-22082433 MS.gene26397:CDS 55.0%
GGAATCACTGCGGTTCCAGA+AGG - chr4.1:22081625-22081644 MS.gene26397:intron 55.0%
GGCTCAACAGGGTTTCACCA+TGG - chr4.1:22081372-22081391 MS.gene26397:CDS 55.0%
GTACCAGCAAGCGTCAACCA+TGG - chr4.1:22082033-22082052 MS.gene26397:intron 55.0%
GTGGATCCTGTTAGATGGCC+TGG - chr4.1:22080211-22080230 MS.gene26397:CDS 55.0%
TATCCCGGGATCGCTTCAAC+AGG - chr4.1:22081755-22081774 MS.gene26397:intron 55.0%
TGTTGAAGCGATCCCGGGAT+AGG + chr4.1:22081756-22081775 None:intergenic 55.0%
TTGTGGATCTTGGCACCTGG+TGG + chr4.1:22081958-22081977 None:intergenic 55.0%
! ATCCCGGGATAGGTTGAACC+GGG + chr4.1:22081746-22081765 None:intergenic 55.0%
! GATCCCGGGATAGGTTGAAC+CGG + chr4.1:22081747-22081766 None:intergenic 55.0%
! GTGGTGGAAGATGAGCCTGA+GGG + chr4.1:22081407-22081426 None:intergenic 55.0%
!! GGTGCTGTTGGTTCTGGTTC+TGG - chr4.1:22078022-22078041 MS.gene26397:CDS 55.0%
ACTTCCATTCCTGGCCGTGC+AGG + chr4.1:22079388-22079407 None:intergenic 60.0%
CAATCTTCGGCTGCTCGACG+AGG + chr4.1:22079159-22079178 None:intergenic 60.0%
CCATGGGAGATTGAGCCCTC+AGG - chr4.1:22081389-22081408 MS.gene26397:CDS 60.0%
CCTGAGGGCTCAATCTCCCA+TGG + chr4.1:22081392-22081411 None:intergenic 60.0%
CTTGTGAAGGAGGGAGGTCC+AGG + chr4.1:22082367-22082386 None:intergenic 60.0%
GGCTGAGGAAGGGAACGATG+AGG - chr4.1:22078598-22078617 MS.gene26397:CDS 60.0%
TAAACGCAGGGCAGCCACGA+AGG - chr4.1:22079515-22079534 MS.gene26397:intron 60.0%
TGAGCTGGCCCGCGGAAAAT+AGG + chr4.1:22082166-22082185 None:intergenic 60.0%
TGTCTTCATGAGCTGGCCCG+CGG + chr4.1:22082174-22082193 None:intergenic 60.0%
!! GGTGGTGGAAGATGAGCCTG+AGG + chr4.1:22081408-22081427 None:intergenic 60.0%
AGGACCTGCACGGCCAGGAA+TGG - chr4.1:22079381-22079400 MS.gene26397:intron 65.0%
GGCAAAGGACCTGCACGGCC+AGG - chr4.1:22079376-22079395 MS.gene26397:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 22077935 22082507 22077935 ID=MS.gene26397
chr4.1 mRNA 22077935 22082507 22077935 ID=MS.gene26397.t1;Parent=MS.gene26397
chr4.1 exon 22082214 22082507 22082214 ID=MS.gene26397.t1.exon1;Parent=MS.gene26397.t1
chr4.1 CDS 22082214 22082507 22082214 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22081787 22081843 22081787 ID=MS.gene26397.t1.exon2;Parent=MS.gene26397.t1
chr4.1 CDS 22081787 22081843 22081787 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22081251 22081439 22081251 ID=MS.gene26397.t1.exon3;Parent=MS.gene26397.t1
chr4.1 CDS 22081251 22081439 22081251 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22081017 22081101 22081017 ID=MS.gene26397.t1.exon4;Parent=MS.gene26397.t1
chr4.1 CDS 22081017 22081101 22081017 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22080828 22080918 22080828 ID=MS.gene26397.t1.exon5;Parent=MS.gene26397.t1
chr4.1 CDS 22080828 22080918 22080828 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22080579 22080743 22080579 ID=MS.gene26397.t1.exon6;Parent=MS.gene26397.t1
chr4.1 CDS 22080579 22080743 22080579 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22080341 22080460 22080341 ID=MS.gene26397.t1.exon7;Parent=MS.gene26397.t1
chr4.1 CDS 22080341 22080460 22080341 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22080187 22080262 22080187 ID=MS.gene26397.t1.exon8;Parent=MS.gene26397.t1
chr4.1 CDS 22080187 22080262 22080187 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22078939 22079098 22078939 ID=MS.gene26397.t1.exon9;Parent=MS.gene26397.t1
chr4.1 CDS 22078939 22079098 22078939 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
chr4.1 exon 22077935 22078842 22077935 ID=MS.gene26397.t1.exon10;Parent=MS.gene26397.t1
chr4.1 CDS 22077935 22078842 22077935 ID=cds.MS.gene26397.t1;Parent=MS.gene26397.t1
Gene Sequence

>MS.gene26397

ATGATGGGTTTGATTGATCTCAACACTACTGAGGAAGATGAAACACCTTCTTCTGGTTCATCTTCAAGTACAAGTATAGGTAGTGTTGGTGCTGTTGGTTCTGGTTCTGGTTCTTCTGTTTGTTTGGAGCTATGGCATGCTTGTGCTGGTCCTATGATCTCTTTGCCAAAGAAAGGAAGTGTTGTTGTTTACTTCCCTCAAGGACACTTGGAACATCTTCATGATTTTCCGTTATCTTTTTCGGATAATATTCCTTCTCATGTGTTCTGTCGTGTTGTTGATGTCAAGCTTCATGTGAGTTTTTGTTATTCCCTTCTTTTCAGCGTACAAATCGAATGTTGTCTTTTATTGGTCGGGTTATAGTTCAATATTCTATTTTCATGTTTTTTTTTTTTTACTTTTTTCCTTCTAAAATTTGGTTTCTTTTTGGGTTTTTACATGTGGGTTTTGTTTGCTCAATGAGGAAATTGATGGGAAAATTATCTATGTTAGTGTCAAGTTTGGCATAGGTTGTTGTTCAATTGACAAATTTTGTGAATGACACTTTTGTTATCTGTGTGTTTTATCTCATTTTTTTTCTTTTTTTTTTTTTTGAGTGAAACTTGTTATGGTTTGGTTTTGTTGTTGCTTTGTATTTTTTGACATAGAATGTGTATTTGTGCAGGCTGAGGAAGGGAACGATGAGGTGTATTGTCAGGTGTTGTTGGTTCCTGAAAGTGAGGTGAGACTTGTTTATGTTTTTTTTTTTTTTTTTTTGGTTCAGTTCTGTTTTGGAGAGAGTGCTGAAAATGGAAAAAAATCTTGATTAATCTTGAGAAATATTACTCAGTGTCTAAGTCTTAGGGGTCTAAGTTGACCATTTGAGATGATTATAATGAAATTGCTTGATTGAGCTATGTTAAGTGTCATATTACCAAAGGAGTCATAGACCATAGTACTAAGTAGCTATAGGCTTGTTCTGTGTCTTTGTTGATTAACTAGTCCTTTTGAACACTAGAGTGCTACATTAGTATTAAATGAAGTGACTTTATGAACTGATTTTTGAATGAACTTGGCCACTTTTTATAGCAAGTGCAACAAAAGTTGAGGGAAGGGGTAATTGATGGTGATGGTGATGGTGAAGGAGAGGATACTGATGCTGTTATGAAGTCAACGACACCTCACATGTTCTGCAAGACTCTTACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTACCTCGTCGAGCAGCCGAAGATTGCTTTCCTCCCCTGGTACTTACCTTGAGTGTGCTACTTTGAAATGACACACCCTTGTTCAATTTTGAAAGTTTTCTTTCATCAAAACTTGTATCTAATTTCTAAAATTGTGCTAAATAGTTATTATTTCAATGCATTTTGAATTTAATCCACTTCCTCTTTAGGATTACTCTCAACAAAGACCTTCACAAGAGCTTGTGGCAAAGGACCTGCACGGCCAGGAATGGAAGTTTCGGCATATATACAGAGGTTTTTCACTTGTTTCTCATTTTTATAAGGACAAGAACATTTCAGGTAGAATACCAATTGATTGTTGGGTTTGTATTTTCGGTTTCTAATAAACGCAGGGCAGCCACGAAGGCATTTGCTTACGACTGGATGGAGTGCATTTGTTAACAAGAAGAAACTTGTATCTGGAGATGCTGTTCTGTTCCTCCGGTAAGATGACCTACATTCTATCAAAACATTTACATAGAGTAACAAGGACTCATCCGACATTTTATATTTCGCGACAATTGACAGAGGAGAAGATGGCGAATTGAGATTGGGAATCCGCAGGGCAGCTCAATTAAAAAATTGCAGTAACTTTTCATCTATCTTTGGCCAGCAATTGAATCTTGGTAGCCTTAAAGACATAGTTAATGCTTTATCTACTAGATGTGCCTTTAGCATACACTACAATCCAAGGTATTTTTATGGCTATTCTCTTGTACGTTTTTTAGTAGTTCGTGAAAGGGAAATCGTTCTTTTCTATCTACAATTTCTAGAGTGTAATATTTTCAATGCTTTTACTATTTCTTTGTAGGATTGGTTCATCTGAGTTCATCATACCTATCCACAAATTCTTAAAGAGCCTTGATTATTCTTACTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAATCTGAAGATGCTGCAGAGCGAAGGTTTGTTCATGATTCAGTTTTTTGTATTCAGATAACCTTATTTAAGAGAATCTTAATCATGTTCCTTTTATTATGCAGATTCACAGGACTAATTATTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAAATGCCTAGTGGTATTTTGCTGGGACCTTTCTAACTTCGTTTATTAGGATTATCATTTATATGCTTGAAATTGGGTGTTAGGAGATGGCTTGTTCTGACCGCAGTTAAGGAAACTCCTGTGGATTTATCATATATAAGTTTGCATTTTTTTTTGTCAATGTTGTGGCTCCTCATGCCTGTGTCATCCTGTCATATGGGGTTGAAGCCTGATATTCTATTTTCAATAAAATTTTGCAGACGGTTTGTTAGTATGATTTTACCGTCGTTTTATTATATAGCCTGCACTTAGGTGCTTGTGTTATAGCAAAATACCTCTGTCTTCCATCTAACTATACATATTAGTGGCACACTTTCAAAACCGTAGGAGTTCTGTACTACTGTTATGTATTCCTTTAGAATGAGAAGGACTATTATATAGTCAAATAATTCCATTATTGAACTGGCTTTATGGAATGTGAAAATTGTAGAAACTTACATGGATCAGTCTTTCAGTGTAATAATTAAATACTCCCTCCGTTTCAAAATAAGTGTCACTTTAGCAAAAATATTTTCTTTCAAAATGAATTTCACTTACACTTTTCAATGTAGAATTATTATTCTACTTCCAATTGTACCCTCTAATTAATTGAGTGTACACTACTTCCAAAACATTACACCAATAGTAAATAAGGTAAGTTTAGTAAAATTGTCATGTCATTTGACACCATCATTACATTTATCAATCTGTGTATAAAAACCTTAAACGACACTCATTTTGAAACAGAAGGGAGTATTACTTAACATAGGAAAAAATTTGGATTTTCAAACCAATACCATATTTCACTTCATATTGTTTTGCCTGACATTGTCTATACTTTACGTTCTTGAAGTAACTCAAGTTTTTGGTAGATGTGAAGTAGCTTAAGAAGTACGCTCGGCAAGCGTATTTCTACTAATTAATCTATAAAAGGCCATTCGTGTGCATGTTTGAAGATTGATTGCATTTGCTGTTCATGGAAACTATGATTGCTTCCTATTAACCTCATTACTACTTGTTTGTGGTGTCATATTTAGAGTAAATTGACTGATTGCAATCAAATGGCATTTCTCATCATTTCAGGTAAGGTGGGATGACATGGAAGCTTCAAGGCTCAACAGGGTTTCACCATGGGAGATTGAGCCCTCAGGCTCATCTTCCACCACCAATAGCTTGATGGCAACTAGTTTGAAGAGGACCAAGACTGGATTGCCTTCATCAAAGCTAGAGTTTCCGGTTCCCAGTATGTCTCAATTTATTTATTTTTTTGGTTTACTTTTGAATTTTTCTACCTCATGCAATGAAACGTCATTGATGAATTGCTCCATTCCTCTAACAGGTAGAATTGGGACATCAGACTTTGGGGAATCACTGCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGCATTGATACTACTTTCAATAGTATCAGTGCTCATAGTCACCACCAGTTATCTGAATTACAGAGGTGCTATCCCGGTTCAACCTATCCCGGGATCGCTTCAACAGGAAACAACATCAGAATCCCACAAATGAATTCTGATGTTTCCTGCAATGGCTTTGGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCTAGCCAACCATATGGACAAGCCTTTTCTGTCAACGAGGCTTGTAGAAATGGTCGCTTTGGACTTTTTGATGGTCACCACCAGGTGCCAAGATCCACAAATGGATGGTCTTCTCTGACGAGTAACAACTCACATTTTCATCCATCAGTGTTGATGTACCAGCAAGCGTCAACCATGGATTATAATAACAAAATTAATCCGGTGGAGGATAACGTCCTTCAAAGAGGTTCGTTCTATGCTTCTGAAATGAAAGATGGTACATCTGCCTCAACGCCAACTAATAGGCCTATTTTCCGCGGGCCAGCTCATGAAGACATGAACTCGTTTGGTACACATTCACGCGATTTGGTTGCACTACAGAGAAGCGGTCAAGAGTTGGTTTCCACATGTAAAAGTAGCTGCAGAGTGTTTGGTTTTTCATTAACCGAGGGTGCTCCCATTGCAAATAAAGATGCAGAACCCTCTGCAGTCACTTGCCAGATAAATCCTGGACCTCCCTCCTTCACAAGACATGTTGAAGATGATTTCAATCCAAGGCATTCACTTCGGAGCAAGGCGGTTGAAAATTACTATACCAAAGTAAGCAATATTCATCCTGTGAGAGACATGATTATCGATAGAGTATTCTAG
Protein sequence

>MS.gene26397.t1

MMGLIDLNTTEEDETPSSGSSSSTSIGSVGAVGSGSGSSVCLELWHACAGPMISLPKKGSVVVYFPQGHLEHLHDFPLSFSDNIPSHVFCRVVDVKLHAEEGNDEVYCQVLLVPESEQVQQKLREGVIDGDGDGEGEDTDAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKNCSNFSSIFGQQLNLGSLKDIVNALSTRCAFSIHYNPRIGSSEFIIPIHKFLKSLDYSYSVGMRFRMRFESEDAAERRFTGLIIGITDVDPVRWPGSKWKCLVVRWDDMEASRLNRVSPWEIEPSGSSSTTNSLMATSLKRTKTGLPSSKLEFPVPSRIGTSDFGESLRFQKVLQGQEILGIDTTFNSISAHSHHQLSELQRCYPGSTYPGIASTGNNIRIPQMNSDVSCNGFGESFRFQKVLQGQEILPSQPYGQAFSVNEACRNGRFGLFDGHHQVPRSTNGWSSLTSNNSHFHPSVLMYQQASTMDYNNKINPVEDNVLQRGSFYASEMKDGTSASTPTNRPIFRGPAHEDMNSFGTHSRDLVALQRSGQELVSTCKSSCRVFGFSLTEGAPIANKDAEPSAVTCQINPGPPSFTRHVEDDFNPRHSLRSKAVENYYTKVSNIHPVRDMIIDRVF