AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31320.t1 MTR_2g093740 94.176 704 40 1 12 714 107 810 0.0 1382
MS.gene31320.t1 MTR_2g093740 92.469 717 40 2 12 714 107 823 0.0 1371
MS.gene31320.t1 MTR_2g093740 94.083 676 39 1 40 714 5 680 0.0 1331
MS.gene31320.t1 MTR_2g093740 92.308 689 39 2 40 714 5 693 0.0 1319
MS.gene31320.t1 MTR_2g093740 94.099 644 37 1 12 654 107 750 0.0 1263
MS.gene31320.t1 MTR_2g093740 92.237 657 37 2 12 654 107 763 0.0 1254
MS.gene31320.t1 MTR_2g093740 93.994 616 36 1 40 654 5 620 0.0 1212
MS.gene31320.t1 MTR_2g093740 92.051 629 36 2 40 654 5 633 0.0 1202
MS.gene31320.t1 MTR_2g093740 93.632 581 36 1 12 591 107 687 0.0 1135
MS.gene31320.t1 MTR_2g093740 91.582 594 36 2 12 591 107 700 0.0 1124
MS.gene31320.t1 MTR_4g060460 73.654 706 156 10 14 714 107 787 0.0 1015
MS.gene31320.t1 MTR_4g060460 73.239 710 157 10 14 714 107 792 0.0 1014
MS.gene31320.t1 MTR_4g088210 40.799 576 307 12 14 571 86 645 3.55e-122 381
MS.gene31320.t1 MTR_4g088210 40.657 578 305 12 14 571 86 645 3.95e-122 380
MS.gene31320.t1 MTR_2g014770 49.070 430 187 11 14 428 100 512 8.50e-121 377
MS.gene31320.t1 MTR_2g014770 54.108 353 145 6 14 359 100 442 2.56e-116 363
MS.gene31320.t1 MTR_8g100050 47.354 378 184 6 4 377 103 469 9.16e-108 344
MS.gene31320.t1 MTR_8g100050 47.354 378 184 6 4 377 103 469 1.63e-106 343
MS.gene31320.t1 MTR_8g100050 50.000 104 52 0 581 684 705 808 2.88e-30 128
MS.gene31320.t1 MTR_2g005240 52.396 313 135 3 12 323 75 374 2.32e-102 328
MS.gene31320.t1 MTR_2g005240 46.212 132 67 2 576 703 537 668 6.21e-28 120
MS.gene31320.t1 MTR_8g027440 50.495 303 134 6 12 313 81 368 3.93e-92 301
MS.gene31320.t1 MTR_8g027440 52.632 95 44 1 586 680 558 651 2.18e-24 108
MS.gene31320.t1 MTR_4g021580 49.832 297 134 4 12 307 71 353 3.84e-91 297
MS.gene31320.t1 MTR_4g021580 47.619 84 40 2 570 653 542 621 3.08e-15 80.1
MS.gene31320.t1 MTR_4g021580 49.832 297 134 4 12 307 71 353 8.10e-91 297
MS.gene31320.t1 MTR_4g021580 47.222 108 53 2 570 677 542 645 6.61e-22 101
MS.gene31320.t1 MTR_5g076270 47.550 347 149 8 17 357 82 401 3.68e-90 300
MS.gene31320.t1 MTR_5g076270 36.691 139 80 4 539 674 670 803 5.83e-19 92.0
MS.gene31320.t1 MTR_2g018690 50.654 306 139 4 17 321 81 375 6.59e-90 301
MS.gene31320.t1 MTR_2g018690 40.152 132 73 4 553 680 743 872 1.00e-20 97.8
MS.gene31320.t1 MTR_3g064050 52.013 298 123 5 17 309 84 366 3.68e-89 298
MS.gene31320.t1 MTR_3g064050 41.880 117 59 3 566 674 696 811 8.23e-19 91.7
MS.gene31320.t1 MTR_7g062540 44.606 343 173 7 4 344 58 385 5.00e-89 293
MS.gene31320.t1 MTR_7g062540 48.148 108 52 2 570 677 557 660 4.67e-24 108
MS.gene31320.t1 MTR_8g079492 50.166 301 138 4 22 321 3 292 4.78e-88 294
MS.gene31320.t1 MTR_8g079492 33.333 150 96 3 528 674 639 787 1.98e-19 93.6
MS.gene31320.t1 MTR_8g079492 49.673 306 142 4 17 321 80 374 6.28e-88 295
MS.gene31320.t1 MTR_8g079492 33.333 150 96 3 528 674 722 870 1.97e-19 94.0
MS.gene31320.t1 MTR_8g079492 49.673 306 142 4 17 321 80 374 6.37e-88 295
MS.gene31320.t1 MTR_8g079492 33.333 150 96 3 528 674 721 869 2.13e-19 93.6
MS.gene31320.t1 MTR_1g024025 51.342 298 132 4 12 308 96 381 4.20e-84 290
MS.gene31320.t1 MTR_1g024025 45.055 91 48 2 586 675 754 843 7.28e-18 89.0
MS.gene31320.t1 MTR_4g124900 51.736 288 128 3 17 304 80 356 6.66e-81 279
MS.gene31320.t1 MTR_4g124900 48.454 97 48 2 581 676 965 1060 3.87e-22 102
MS.gene31320.t1 MTR_4g124900 51.736 288 128 3 17 304 80 356 9.34e-81 279
MS.gene31320.t1 MTR_4g124900 48.454 97 48 2 581 676 988 1083 4.31e-22 102
MS.gene31320.t1 MTR_2g043250 50.694 288 131 3 17 304 80 356 1.26e-79 276
MS.gene31320.t1 MTR_2g043250 48.454 97 48 2 581 676 981 1076 3.47e-21 99.8
MS.gene31320.t1 MTR_8g101360 47.973 296 128 4 20 307 92 369 3.31e-73 257
MS.gene31320.t1 MTR_8g101360 47.826 92 46 2 586 676 984 1074 1.71e-20 97.4
MS.gene31320.t1 MTR_8g446900 40.678 295 155 5 15 307 16 292 2.78e-68 229
MS.gene31320.t1 MTR_2g094570 41.337 329 145 8 12 303 58 375 3.15e-64 226
MS.gene31320.t1 MTR_2g094570 41.337 329 145 8 12 303 58 375 4.11e-64 226
MS.gene31320.t1 MTR_2g094570 41.337 329 145 8 12 303 114 431 8.54e-64 226
MS.gene31320.t1 MTR_1g064430 37.190 363 172 7 14 333 89 438 1.34e-62 222
MS.gene31320.t1 MTR_1g064430 37.190 363 172 7 14 333 76 425 1.46e-62 222
MS.gene31320.t1 MTR_1g094960 37.313 335 166 5 14 313 67 392 8.63e-58 207
MS.gene31320.t1 MTR_4g058930 38.551 345 160 6 12 313 57 392 1.58e-57 207
MS.gene31320.t1 MTR_4g058930 38.551 345 160 6 12 313 57 392 2.31e-57 207
MS.gene31320.t1 MTR_7g101280 35.673 342 165 6 14 309 80 412 6.00e-52 191
MS.gene31320.t1 MTR_0041s0110 35.673 342 165 6 14 309 80 412 6.00e-52 191
MS.gene31320.t1 MTR_7g101275 40.590 271 146 6 14 281 41 299 2.21e-50 181
MS.gene31320.t1 MTR_3g073420 36.471 340 165 9 12 311 67 395 5.85e-49 182
MS.gene31320.t1 MTR_5g040880 34.286 315 178 10 12 321 61 351 3.12e-44 167
MS.gene31320.t1 MTR_5g061220 33.234 337 175 10 15 320 72 389 3.31e-43 164
MS.gene31320.t1 MTR_2g024430 33.224 304 173 8 15 314 74 351 1.51e-41 159
MS.gene31320.t1 MTR_0041s0120 35.294 289 148 6 14 281 41 311 1.58e-39 151
MS.gene31320.t1 MTR_5g082140 34.069 317 179 10 15 325 65 357 1.58e-38 149
MS.gene31320.t1 MTR_5g040740 35.048 311 156 14 15 315 65 339 1.25e-37 145
MS.gene31320.t1 MTR_1g058210 28.395 324 191 7 15 325 65 360 2.49e-33 134
MS.gene31320.t1 MTR_2g006270 28.182 330 213 7 15 342 68 375 2.92e-29 122
MS.gene31320.t1 MTR_5g060630 28.963 328 196 12 15 313 65 384 5.57e-27 116
MS.gene31320.t1 MTR_5g460740 28.963 328 196 12 15 313 65 384 5.57e-27 116
MS.gene31320.t1 MTR_2g006380 30.769 312 177 14 18 324 78 355 2.40e-26 113
MS.gene31320.t1 MTR_3g064050 42.308 130 73 2 181 309 1 129 2.43e-24 108
MS.gene31320.t1 MTR_3g064050 41.880 117 59 3 566 674 459 574 5.87e-19 91.7
MS.gene31320.t1 MTR_5g062970 33.553 152 93 2 18 169 91 234 4.63e-21 93.2
MS.gene31320.t1 MTR_5g060780 27.483 302 189 10 15 307 65 345 8.12e-20 92.8
MS.gene31320.t1 MTR_5g460920 27.483 302 189 10 15 307 65 345 9.57e-20 92.4
MS.gene31320.t1 MTR_5g074840 35.088 171 80 3 55 225 9 148 1.30e-19 87.0
MS.gene31320.t1 MTR_5g061890 28.053 303 186 12 15 307 65 345 9.96e-18 86.3
MS.gene31320.t1 MTR_5g032260 34.921 126 76 3 178 302 34 154 7.23e-15 77.8
MS.gene31320.t1 MTR_7g117455 36.111 108 68 1 71 178 116 222 6.77e-11 65.5
MS.gene31320.t1 MTR_8g023990 36.697 109 67 2 59 167 158 264 9.78e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31320.t1 AT5G60450 57.345 708 258 12 14 714 94 764 0.0 741
MS.gene31320.t1 AT5G60450 57.345 708 258 12 14 714 118 788 0.0 741
MS.gene31320.t1 AT5G62000 36.293 777 398 18 4 711 105 853 7.25e-149 455
MS.gene31320.t1 AT5G62000 36.293 777 398 18 4 711 105 853 7.25e-149 455
MS.gene31320.t1 AT5G62000 36.293 777 398 18 4 711 105 853 7.25e-149 455
MS.gene31320.t1 AT5G62000 36.293 777 398 18 4 711 105 853 7.25e-149 455
MS.gene31320.t1 AT5G62000 37.131 746 377 17 4 680 105 827 1.15e-148 454
MS.gene31320.t1 AT2G33860 47.380 439 188 9 2 434 89 490 1.59e-120 374
MS.gene31320.t1 AT2G33860 49.862 363 152 5 72 434 1 333 2.15e-112 347
MS.gene31320.t1 AT3G61830 46.970 330 154 6 12 335 27 341 1.02e-96 310
MS.gene31320.t1 AT3G61830 35.519 183 78 5 535 678 348 529 1.94e-24 108
MS.gene31320.t1 AT3G61830 46.970 330 154 6 12 335 78 392 5.75e-96 309
MS.gene31320.t1 AT3G61830 35.519 183 78 5 535 678 399 580 2.83e-24 108
MS.gene31320.t1 AT1G59750 49.682 314 144 4 12 323 74 375 5.27e-95 308
MS.gene31320.t1 AT1G59750 56.000 100 44 0 576 675 527 626 2.63e-29 124
MS.gene31320.t1 AT1G59750 49.682 314 144 4 12 323 74 375 5.47e-95 308
MS.gene31320.t1 AT1G59750 56.000 100 44 0 576 675 529 628 2.51e-29 124
MS.gene31320.t1 AT1G59750 49.682 314 144 4 12 323 74 375 6.01e-95 308
MS.gene31320.t1 AT1G59750 56.000 100 44 0 576 675 532 631 2.41e-29 124
MS.gene31320.t1 AT1G59750 49.682 314 144 4 12 323 74 375 6.01e-95 308
MS.gene31320.t1 AT1G59750 56.000 100 44 0 576 675 532 631 2.41e-29 124
MS.gene31320.t1 AT2G46530 46.497 314 151 6 12 323 74 372 7.66e-89 290
MS.gene31320.t1 AT2G46530 44.000 125 65 2 550 674 458 577 3.27e-25 111
MS.gene31320.t1 AT2G46530 46.497 314 151 6 12 323 95 393 1.43e-88 290
MS.gene31320.t1 AT2G46530 44.000 125 65 2 550 674 479 598 4.67e-25 110
MS.gene31320.t1 AT5G37020 51.361 294 131 4 17 309 80 362 1.66e-88 294
MS.gene31320.t1 AT5G37020 52.174 69 31 2 586 653 705 772 3.41e-16 83.2
MS.gene31320.t1 AT5G37020 50.327 306 140 4 17 321 80 374 3.50e-88 294
MS.gene31320.t1 AT5G37020 47.778 90 45 2 586 674 705 793 2.33e-19 93.6
MS.gene31320.t1 AT4G23980 49.186 307 136 7 1 304 54 343 1.54e-87 288
MS.gene31320.t1 AT4G23980 53.000 100 46 1 578 677 513 611 3.82e-26 114
MS.gene31320.t1 AT1G30330 46.647 343 156 6 5 331 68 399 1.73e-87 295
MS.gene31320.t1 AT1G30330 46.078 102 51 3 576 674 782 882 8.14e-21 98.2
MS.gene31320.t1 AT1G30330 46.647 343 156 6 5 331 70 401 1.84e-87 295
MS.gene31320.t1 AT1G30330 46.078 102 51 3 576 674 784 884 7.95e-21 98.2
MS.gene31320.t1 AT1G30330 46.647 343 156 6 5 331 70 401 1.84e-87 295
MS.gene31320.t1 AT1G30330 46.078 102 51 3 576 674 784 884 7.95e-21 98.2
MS.gene31320.t1 AT4G23980 49.186 307 136 7 1 304 54 343 1.85e-87 288
MS.gene31320.t1 AT4G23980 53.000 100 46 1 578 677 515 613 4.06e-26 114
MS.gene31320.t1 AT5G37020 54.264 258 116 2 65 321 23 279 1.29e-85 285
MS.gene31320.t1 AT5G37020 47.778 90 45 2 586 674 610 698 1.71e-19 94.0
MS.gene31320.t1 AT1G19850 50.168 297 134 5 14 308 98 382 1.23e-82 281
MS.gene31320.t1 AT1G19850 44.444 99 53 2 578 675 774 871 9.18e-19 91.7
MS.gene31320.t1 AT1G19850 50.168 297 134 5 14 308 109 393 1.35e-82 281
MS.gene31320.t1 AT1G19850 44.444 99 53 2 578 675 785 882 9.42e-19 91.7
MS.gene31320.t1 AT2G46530 48.659 261 128 4 65 323 29 285 3.76e-82 270
MS.gene31320.t1 AT2G46530 44.000 125 65 2 550 674 371 490 1.64e-25 111
MS.gene31320.t1 AT1G19220 51.557 289 125 4 18 304 81 356 1.98e-79 275
MS.gene31320.t1 AT1G19220 46.018 113 55 3 581 688 953 1064 1.04e-22 104
MS.gene31320.t1 AT5G20730 50.690 290 128 4 17 304 81 357 9.40e-77 268
MS.gene31320.t1 AT5G20730 37.576 165 79 6 515 676 984 1127 1.36e-21 100
MS.gene31320.t1 AT5G20730 50.515 291 128 5 17 304 81 358 2.86e-75 264
MS.gene31320.t1 AT5G20730 37.576 165 79 6 515 676 985 1128 1.30e-21 101
MS.gene31320.t1 AT5G20730 50.515 291 128 5 17 304 81 358 4.27e-75 263
MS.gene31320.t1 AT5G20730 37.576 165 79 6 515 676 985 1128 1.36e-21 100
MS.gene31320.t1 AT1G35540 41.509 318 165 6 8 324 74 371 3.38e-74 251
MS.gene31320.t1 AT1G35540 30.268 261 126 7 420 674 387 597 3.81e-24 108
MS.gene31320.t1 AT1G34410 40.064 312 166 6 14 322 81 374 2.75e-71 244
MS.gene31320.t1 AT1G34410 52.632 95 44 1 578 672 503 596 2.07e-23 105
MS.gene31320.t1 AT1G34310 40.385 312 165 6 14 322 81 374 6.48e-71 242
MS.gene31320.t1 AT1G34310 48.624 109 54 2 558 665 482 589 7.15e-23 103
MS.gene31320.t1 AT1G35240 41.290 310 162 6 14 323 81 370 7.55e-71 242
MS.gene31320.t1 AT1G35240 51.579 95 45 1 578 672 489 582 5.27e-23 104
MS.gene31320.t1 AT1G35520 41.290 310 162 6 14 323 81 370 1.35e-69 239
MS.gene31320.t1 AT1G35520 45.872 109 57 2 558 665 482 589 1.21e-21 100
MS.gene31320.t1 AT1G34170 39.432 317 169 7 14 328 79 374 1.80e-68 233
MS.gene31320.t1 AT1G34390 41.538 325 165 9 14 335 81 383 1.90e-67 233
MS.gene31320.t1 AT1G34390 46.364 110 57 2 558 666 480 588 4.92e-21 98.2
MS.gene31320.t1 AT2G28350 39.286 364 171 6 12 333 56 411 1.04e-66 233
MS.gene31320.t1 AT2G28350 39.286 364 171 6 12 333 56 411 1.25e-66 233
MS.gene31320.t1 AT4G30080 38.416 341 163 7 12 315 65 395 3.29e-62 220
MS.gene31320.t1 AT1G34170 37.224 317 150 7 14 328 79 348 1.02e-57 204
MS.gene31320.t1 AT1G34170 37.224 317 150 7 14 328 79 348 5.03e-57 203
MS.gene31320.t1 AT1G34170 40.566 106 55 2 578 676 418 522 2.42e-18 89.7
MS.gene31320.t1 AT1G77850 28.904 429 249 8 15 407 67 475 4.47e-46 174
MS.gene31320.t1 AT1G77850 28.904 429 249 8 15 407 67 475 7.02e-46 173
MS.gene31320.t1 AT1G43950 44.025 159 72 4 14 172 81 222 2.68e-33 128
MS.gene31320.t1 AT2G46870 32.353 170 93 6 48 214 10 160 9.30e-12 67.4
MS.gene31320.t1 AT4G01500 38.043 92 54 1 71 162 34 122 1.03e-11 67.4
MS.gene31320.t1 AT1G01030 36.735 98 61 1 65 162 48 144 1.39e-11 67.0
MS.gene31320.t1 AT1G01030 36.735 98 61 1 65 162 48 144 1.88e-11 66.6
MS.gene31320.t1 AT1G13260 34.711 121 75 2 54 170 167 287 2.40e-11 66.2

Find 174 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATAGCTGACCTTCTTTC+TGG 0.139715 2.4:-8276593 None:intergenic
GTAAATCCTTGTAGACTATT+TGG 0.158429 2.4:+8277869 MS.gene31320:CDS
AACCTCATCATTCTCCTTAT+TGG 0.160497 2.4:-8275009 None:intergenic
CTTCTTCTTGTGTATATATA+TGG 0.165929 2.4:-8278689 None:intergenic
AGCCAGAAGAATCTTGTTTC+TGG 0.202166 2.4:+8276059 MS.gene31320:CDS
AACATTCTCTAGTTGGAAAT+TGG 0.212031 2.4:-8277684 None:intergenic
AGAAATGAAGTTGGAATATC+AGG 0.255023 2.4:+8277743 MS.gene31320:CDS
AGCTGGAGACAGTGGGTTTA+TGG 0.268758 2.4:+8277199 MS.gene31320:intron
TATTTCATAACAAACTTAAA+AGG 0.270423 2.4:+8273771 MS.gene31320:CDS
CCTGCAGCTTCTGCTTGTTT+CGG 0.298110 2.4:-8277775 None:intergenic
TTTGACTTGGGCCATTTATA+GGG 0.298149 2.4:-8276721 None:intergenic
AAACTTAACTTTCACTCATT+AGG 0.322689 2.4:+8277575 MS.gene31320:CDS
AGTGAACTAGAGAGACTATT+TGG 0.331029 2.4:+8278130 MS.gene31320:CDS
GTGATTTGGATCCCTATAAA+TGG 0.335220 2.4:+8276710 MS.gene31320:CDS
TTTCCATTAACAGGCCAATA+AGG 0.336836 2.4:+8274995 MS.gene31320:intron
GAAGTGGAGAAGATGACAAT+TGG 0.348700 2.4:+8278708 MS.gene31320:CDS
CGGAAACGAACCGGTTTCCT+AGG 0.350274 2.4:+8277432 MS.gene31320:CDS
TAGTTGGAAATTGGTTGGTT+TGG 0.350673 2.4:-8277675 None:intergenic
TGGTTACCAACAATTGATTC+AGG 0.358579 2.4:-8276276 None:intergenic
TTCACCTACCTCGATAAATA+TGG 0.367329 2.4:-8275912 None:intergenic
CTGCAGTGAGTTCTGTGTTA+TGG 0.372350 2.4:+8278656 MS.gene31320:intron
ATTCAAAATGAAATTTGAAA+TGG 0.374517 2.4:+8276562 MS.gene31320:CDS
TTGATCTAAACCTTAACTCT+TGG 0.379579 2.4:+8277504 MS.gene31320:CDS
CCACCTGCTTCTAAACCTTC+AGG 0.382333 2.4:-8275458 None:intergenic
ATAAATGGCCCAAGTCAAAA+TGG 0.382489 2.4:+8276725 MS.gene31320:CDS
CCCCAGAAACAAGATTCTTC+TGG 0.384844 2.4:-8276061 None:intergenic
GGGACGCAGTGCTCTTTCTA+AGG 0.386238 2.4:+8276081 MS.gene31320:CDS
TGATCTAAACCTTAACTCTT+GGG 0.391011 2.4:+8277505 MS.gene31320:CDS
GCCAGAAGAATCTTGTTTCT+GGG 0.395328 2.4:+8276060 MS.gene31320:CDS
TAAATGAAACATTCTCTAGT+TGG 0.401148 2.4:-8277691 None:intergenic
CACAAACAAGGGAGCTTAGT+TGG 0.402834 2.4:+8278061 MS.gene31320:CDS
ATGTGAGAAGCTAACTTTGT+AGG 0.405019 2.4:-8275500 None:intergenic
TGACAGTGAAAATGACATTA+TGG 0.405346 2.4:+8278204 MS.gene31320:CDS
TCAGTTAGCAGGGATGTGTT+TGG 0.410443 2.4:+8275424 MS.gene31320:intron
GGTTTAGAAGCAGGTGGAGA+GGG 0.411642 2.4:+8275464 MS.gene31320:CDS
ATTTCTGCTGCTGCTTCTCT+AGG 0.415866 2.4:+8277803 MS.gene31320:CDS
TTGGTAAGGCACAACGAAAT+CGG 0.417321 2.4:-8276495 None:intergenic
CATACTAATCTTGCATCAAA+TGG 0.420961 2.4:+8277347 MS.gene31320:CDS
TAATGAGTGAAAGTTAAGTT+TGG 0.421167 2.4:-8277573 None:intergenic
GATTCAGGAAGACCGTTTCT+CGG 0.422054 2.4:-8276261 None:intergenic
TGATGATAACCAGAGTTGTT+TGG 0.426706 2.4:+8278740 MS.gene31320:CDS
TTGTGTTGCATTCAGTTAGC+AGG 0.431661 2.4:+8275413 MS.gene31320:intron
GTCAAAATGGAGATGCTTGA+TGG 0.432058 2.4:+8276738 MS.gene31320:CDS
AAAATGACATTATGGTTGTT+GGG 0.432406 2.4:+8278212 MS.gene31320:CDS
AGGATTCTCCATCCTTTGTC+AGG 0.432653 2.4:-8278175 None:intergenic
AAGTGGAGAAGATGACAATT+GGG 0.436343 2.4:+8278709 MS.gene31320:CDS
AATACTCCTTCAGCTCAGAT+AGG 0.438938 2.4:+8277713 MS.gene31320:CDS
TTCTAGTTATGCAGACTTCA+CGG 0.440375 2.4:+8277412 MS.gene31320:CDS
CAGACTTCACGGAAACGAAC+CGG 0.444346 2.4:+8277423 MS.gene31320:CDS
ACTACTGTTGGAGAAGAATC+TGG 0.448069 2.4:-8278813 None:intergenic
TTAGATCAACCTTTCCTGCC+AGG 0.450136 2.4:-8277490 None:intergenic
AGTGACTGGAATGAGTGATT+TGG 0.450736 2.4:+8276696 MS.gene31320:CDS
TTCTTGACCTTGCAAGACCT+TGG 0.450899 2.4:-8277246 None:intergenic
TCGACAAGATTGAATGTTCA+AGG 0.452440 2.4:-8277038 None:intergenic
ATCAAGATAGAGTCTCTCCT+TGG 0.455503 2.4:+8276987 MS.gene31320:CDS
GGTCTTCCTGAATCAATTGT+TGG 0.457519 2.4:+8276270 MS.gene31320:CDS
TTGGATTCATACCAGTGATA+AGG 0.459048 2.4:-8277108 None:intergenic
GCCTCTGATACCAGCACTCA+TGG 0.459057 2.4:+8275542 MS.gene31320:CDS
GTGAAGTCTGCATAACTAGA+AGG 0.460590 2.4:-8277410 None:intergenic
AAAAGTATGCTAAAAGCATC+AGG 0.463277 2.4:+8276516 MS.gene31320:CDS
TAAGTTTGGTTGCATTATGC+AGG 0.464035 2.4:-8277559 None:intergenic
GAAGCAGGTGGAGAGGGAGA+TGG 0.465289 2.4:+8275470 MS.gene31320:CDS
TACTTTGCTTCCACAGGCAG+AGG 0.469813 2.4:+8275043 MS.gene31320:CDS
GGTGGTTTCCGCCGCCGATA+AGG 0.472069 2.4:-8277897 None:intergenic
GTAGTGAGCAGATGCCTCCT+TGG 0.475837 2.4:-8276017 None:intergenic
TTCTCTAGTTGGAAATTGGT+TGG 0.476906 2.4:-8277680 None:intergenic
ACTTTGTGTATATCACCATA+TGG 0.477775 2.4:-8277626 None:intergenic
GAAAATGACATTATGGTTGT+TGG 0.484036 2.4:+8278211 MS.gene31320:CDS
CTTGCAAGACCCTAGGAAAC+CGG 0.485163 2.4:-8277442 None:intergenic
TTTGAAGCCTCCACAATCAA+TGG 0.488117 2.4:-8278771 None:intergenic
TCCTAGTTTCCTTTCTTCAG+TGG 0.491250 2.4:+8276308 MS.gene31320:CDS
TTTAGTAAAACTTACTGCCA+TGG 0.494050 2.4:-8278241 None:intergenic
AGGAGGCATCTGCTCACTAC+TGG 0.505121 2.4:+8276020 MS.gene31320:CDS
CATACCAGTGATAAGGTGAC+TGG 0.506398 2.4:-8277101 None:intergenic
GGCATCTGCTCACTACTGGC+TGG 0.509364 2.4:+8276024 MS.gene31320:CDS
AACTAGATTCTAACTACTGT+TGG 0.511297 2.4:-8278825 None:intergenic
TATATCACCATATGGAAAAG+AGG 0.512064 2.4:-8277618 None:intergenic
ATCTTGTCCCTATGGTCAGT+GGG 0.513478 2.4:-8276541 None:intergenic
GAGCCTGAAGGTTTAGAAGC+AGG 0.515631 2.4:+8275455 MS.gene31320:CDS
GTGATATTACACAGGTCCGA+TGG 0.515735 2.4:+8276942 MS.gene31320:intron
TCTCTATATAGGGGTGAAAA+CGG 0.516203 2.4:+8276204 MS.gene31320:intron
ATAATTTGTGTAACTAACAT+TGG 0.517422 2.4:-8277534 None:intergenic
AATCTTGTCCCTATGGTCAG+TGG 0.518063 2.4:-8276542 None:intergenic
ATTGAGCAGCTACAATGATC+TGG 0.518918 2.4:+8278105 MS.gene31320:CDS
TGAAAACGGAGAGTTAAGAT+TGG 0.519467 2.4:+8276218 MS.gene31320:CDS
AGAGCTGCTCGACCGAGAAA+CGG 0.520377 2.4:+8276249 MS.gene31320:CDS
TAAGAGATCCTGACAAAGGA+TGG 0.521003 2.4:+8278167 MS.gene31320:CDS
CTTCTCTAGGTGCAAACTTG+AGG 0.522379 2.4:+8277816 MS.gene31320:CDS
ATTGAGATCCCTGGCAGGAA+AGG 0.523346 2.4:+8277481 MS.gene31320:CDS
TCTTGACCTTGCAAGACCCT+AGG 0.523482 2.4:-8277449 None:intergenic
GGTGCATTGAGAAATGAAGT+TGG 0.523787 2.4:+8277734 MS.gene31320:CDS
TATATATACACAAGAAGAAG+TGG 0.530321 2.4:+8278692 MS.gene31320:CDS
TCAAGATAGAGTCTCTCCTT+GGG 0.533378 2.4:+8276988 MS.gene31320:CDS
TGAATGAAGGTTCACAAACA+AGG 0.534840 2.4:+8278049 MS.gene31320:intron
TCAGGAACCCACTGACCATA+GGG 0.535798 2.4:+8276534 MS.gene31320:CDS
TAGCATTAGCCACTGAAGAA+AGG 0.540509 2.4:-8276317 None:intergenic
CCGAAACAAGCAGAAGCTGC+AGG 0.542656 2.4:+8277775 MS.gene31320:CDS
ACAGGTTACTTTGCTTCCAC+AGG 0.543725 2.4:+8275037 MS.gene31320:CDS
TAGATCAACCTTTCCTGCCA+GGG 0.544208 2.4:-8277489 None:intergenic
TGTAGTAGCGGTATAGTGAC+TGG 0.545183 2.4:+8276682 MS.gene31320:CDS
TATGGTGATATACACAAAGT+TGG 0.548146 2.4:+8277629 MS.gene31320:CDS
GAAAACGGAGAGTTAAGATT+GGG 0.548310 2.4:+8276219 MS.gene31320:CDS
TGGATGAATCTCCAGAAAGA+AGG 0.548781 2.4:+8276582 MS.gene31320:CDS
TTTCCTGCCAGGGATCTCAA+TGG 0.549270 2.4:-8277479 None:intergenic
GAGAGACTATTTGGCATGGA+AGG 0.550692 2.4:+8278139 MS.gene31320:CDS
GCTCAATCTTGAGAGATCAA+TGG 0.551608 2.4:-8278089 None:intergenic
AATATATCCATTGAGATCCC+TGG 0.553252 2.4:+8277472 MS.gene31320:CDS
GGAACATACACCATTGATTG+TGG 0.553625 2.4:+8278761 MS.gene31320:CDS
AGGCTGAAGAAACTGCGGAC+GGG 0.554562 2.4:+8277061 MS.gene31320:CDS
TACACAGGTCCGATGGGATG+AGG 0.555224 2.4:+8276949 MS.gene31320:intron
GGAAACTAGGAGAACAACTC+TGG 0.556326 2.4:-8276296 None:intergenic
TGAACATTCAATCTTGTCGA+AGG 0.558866 2.4:+8277041 MS.gene31320:CDS
AGGCTGAACCCTCGTAAACT+CGG 0.559216 2.4:-8277390 None:intergenic
AGAAAACCCTCCATGAGTGC+TGG 0.560225 2.4:-8275552 None:intergenic
TGTGTTGCATTCAGTTAGCA+GGG 0.565461 2.4:+8275414 MS.gene31320:intron
GAAAATCCAAATAGTCTACA+AGG 0.566058 2.4:-8277875 None:intergenic
GCTTCAAAGTCTTCCTCAGT+GGG 0.567657 2.4:+8278786 MS.gene31320:CDS
CCAGAAGAATCTTGTTTCTG+GGG 0.569533 2.4:+8276061 MS.gene31320:CDS
TGATATTACACAGGTCCGAT+GGG 0.571325 2.4:+8276943 MS.gene31320:intron
CCGATGGGATGAGGATATTG+AGG 0.572780 2.4:+8276958 MS.gene31320:CDS
GCCACTGAAGAAAGGAAACT+AGG 0.575196 2.4:-8276309 None:intergenic
CGACAAGATTGAATGTTCAA+GGG 0.577787 2.4:-8277037 None:intergenic
GTGTATGTTCCAAACAACTC+TGG 0.578457 2.4:-8278749 None:intergenic
TGGTTGTTGGGGATGATCCA+TGG 0.581281 2.4:+8278224 MS.gene31320:CDS
TCACCCAGTCACCTTATCAC+TGG 0.584443 2.4:+8277097 MS.gene31320:CDS
ATCAGGAACCCACTGACCAT+AGG 0.589785 2.4:+8276533 MS.gene31320:CDS
TATCCATTGAGATCCCTGGC+AGG 0.592828 2.4:+8277476 MS.gene31320:CDS
TTCATCGCAGCTGGAGACAG+TGG 0.594260 2.4:+8277191 MS.gene31320:intron
AGGTTTAGAAGCAGGTGGAG+AGG 0.594537 2.4:+8275463 MS.gene31320:CDS
ATTTCCACTCCACACCATGC+AGG 0.596067 2.4:-8275885 None:intergenic
TCATCGCAGCTGGAGACAGT+GGG 0.597361 2.4:+8277192 MS.gene31320:intron
AATGCACCTATCTGAGCTGA+AGG 0.597701 2.4:-8277719 None:intergenic
CGGTTTCCTAGGGTCTTGCA+AGG 0.598452 2.4:+8277443 MS.gene31320:CDS
AATCTTTGTCAGGTCAGCCA+AGG 0.599067 2.4:+8276000 MS.gene31320:intron
AAGATTGAATGTTCAAGGGA+GGG 0.602810 2.4:-8277033 None:intergenic
TCCATGAGTGCTGGTATCAG+AGG 0.602998 2.4:-8275543 None:intergenic
TTACTTCTTCCGAGTTTACG+AGG 0.603395 2.4:+8277381 MS.gene31320:CDS
GATATACACAAAGTTGGTCA+AGG 0.608483 2.4:+8277635 MS.gene31320:CDS
GATCTAAACCTTAACTCTTG+GGG 0.609198 2.4:+8277506 MS.gene31320:CDS
AAATGACATTATGGTTGTTG+GGG 0.611574 2.4:+8278213 MS.gene31320:CDS
TTTGCAACAAGCTCTTGAGA+GGG 0.613596 2.4:-8275859 None:intergenic
GGCTTCAAAGTCTTCCTCAG+TGG 0.617874 2.4:+8278785 MS.gene31320:CDS
GGAAACGAACCGGTTTCCTA+GGG 0.618178 2.4:+8277433 MS.gene31320:CDS
AGATCGACCAAGGTCTTGCA+AGG 0.618905 2.4:+8277239 MS.gene31320:CDS
TGTCATACTCATACCAAAGG+AGG 0.620459 2.4:-8275605 None:intergenic
CTGATACCAGCACTCATGGA+GGG 0.625106 2.4:+8275546 MS.gene31320:CDS
CCTCAATATCCTCATCCCAT+CGG 0.625293 2.4:-8276958 None:intergenic
CTTTGTCAGGTCAGCCAAGG+AGG 0.625815 2.4:+8276003 MS.gene31320:intron
TTGGATGACAAAGAGCCTGA+AGG 0.629150 2.4:+8275443 MS.gene31320:CDS
GAATGAAGGTTCACAAACAA+GGG 0.629502 2.4:+8278050 MS.gene31320:intron
CAAGATTGAATGTTCAAGGG+AGG 0.630768 2.4:-8277034 None:intergenic
ACTAGAGAGACTATTTGGCA+TGG 0.631155 2.4:+8278135 MS.gene31320:CDS
TACTTCTTCCGAGTTTACGA+GGG 0.633533 2.4:+8277382 MS.gene31320:CDS
ATAAAACAAACCTCTGCCTG+TGG 0.635072 2.4:-8275053 None:intergenic
CCTGAAGGTTTAGAAGCAGG+TGG 0.635598 2.4:+8275458 MS.gene31320:CDS
AAGGGAGGGAGAGAAGTAGA+CGG 0.635894 2.4:-8277019 None:intergenic
GAATGATGAGGTTTACACAC+AGG 0.638216 2.4:+8275019 MS.gene31320:CDS
TGCAAAAGACCTGCATGGTG+TGG 0.639765 2.4:+8275876 MS.gene31320:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.642527 2.4:+8275881 MS.gene31320:CDS
ACATACACCATTGATTGTGG+AGG 0.643124 2.4:+8278764 MS.gene31320:CDS
ATGTCTTGCAGGTGTAGTAG+CGG 0.648254 2.4:+8276670 MS.gene31320:intron
CTTCTAAGAGATCCTGACAA+AGG 0.649192 2.4:+8278163 MS.gene31320:CDS
AAGGCTGAAGAAACTGCGGA+CGG 0.656866 2.4:+8277060 MS.gene31320:CDS
TGCTAAAAGAAGTTGCACGA+AGG 0.662737 2.4:+8277940 MS.gene31320:CDS
AAATTTCGCCATATTTATCG+AGG 0.663380 2.4:+8275904 MS.gene31320:CDS
GTAGACGGATCGATCTCCCA+AGG 0.663808 2.4:-8277004 None:intergenic
GGCCAATAAGGAGAATGATG+AGG 0.666485 2.4:+8275007 MS.gene31320:intron
ATACCAGTGATAAGGTGACT+GGG 0.667650 2.4:-8277100 None:intergenic
GTCGAAGGCTGAAGAAACTG+CGG 0.672621 2.4:+8277056 MS.gene31320:CDS
CAATCTTCAGCAGCTCGACG+AGG 0.685556 2.4:-8275578 None:intergenic
TCTGATACCAGCACTCATGG+AGG 0.685802 2.4:+8275545 MS.gene31320:CDS
TGAGTCTATAAGATCGACCA+AGG 0.694503 2.4:+8277229 MS.gene31320:CDS
CTTGTTGCAAAAGACCTGCA+TGG 0.711702 2.4:+8275871 MS.gene31320:CDS
AGAATCTGGCTGTCCCACTG+AGG 0.716343 2.4:-8278799 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTATACTGATTTAA+TGG - chr2.4:8278316-8278335 None:intergenic 10.0%
!! AAACATATTAAATATACATG+TGG - chr2.4:8276446-8276465 None:intergenic 15.0%
!! AACATATTAAATATACATGT+GGG - chr2.4:8276445-8276464 None:intergenic 15.0%
!! ATTCAAAATGAAATTTGAAA+TGG + chr2.4:8276562-8276581 MS.gene31320:CDS 15.0%
!! TATTAATGTAATGTTTAGAA+AGG - chr2.4:8276878-8276897 None:intergenic 15.0%
!! TATTTCATAACAAACTTAAA+AGG + chr2.4:8273771-8273790 MS.gene31320:CDS 15.0%
!! TCATTATTTGATATTTGATT+TGG + chr2.4:8274150-8274169 MS.gene31320:intron 15.0%
!! TGATATTATATTTCAAATGT+CGG + chr2.4:8278540-8278559 MS.gene31320:intron 15.0%
!!! ATAAATGAAACATCAATTTT+TGG + chr2.4:8273828-8273847 MS.gene31320:intron 15.0%
!!! ATTTAGGTATTATTTTTTGT+CGG - chr2.4:8274321-8274340 None:intergenic 15.0%
!!! ATTTGAAATATAATATCACA+AGG - chr2.4:8278538-8278557 None:intergenic 15.0%
!! AAAAAGAAAGATAAAAGTGA+AGG - chr2.4:8274248-8274267 None:intergenic 20.0%
!! ACCATATGATATTTATTCAA+TGG - chr2.4:8278461-8278480 None:intergenic 20.0%
!! ACCATTGAATAAATATCATA+TGG + chr2.4:8278457-8278476 MS.gene31320:intron 20.0%
!! ATGTAATATACAATGAATGA+AGG + chr2.4:8278036-8278055 MS.gene31320:intron 20.0%
!! ATTCATATCACAATATAACT+CGG - chr2.4:8277982-8278001 None:intergenic 20.0%
!! ATTTCAAAATATCGATCTAA+TGG + chr2.4:8278332-8278351 MS.gene31320:intron 20.0%
!! GATATTATATTTCAAATGTC+GGG + chr2.4:8278541-8278560 MS.gene31320:intron 20.0%
!! GATTTATGAAAGAAAGAAAA+AGG - chr2.4:8274209-8274228 None:intergenic 20.0%
!!! AGTTTTATGTCACTATATTA+TGG + chr2.4:8277275-8277294 MS.gene31320:CDS 20.0%
!!! ATAATTTGTGTAACTAACAT+TGG - chr2.4:8277537-8277556 None:intergenic 20.0%
!!! GTTTTATGGTTTAACATATT+TGG + chr2.4:8275069-8275088 MS.gene31320:intron 20.0%
!!! TCAAAAGTTAATTTTGTTAG+TGG - chr2.4:8274012-8274031 None:intergenic 20.0%
!!! TGTATATTTTTTCCATTAAC+AGG + chr2.4:8274986-8275005 MS.gene31320:intron 20.0%
!!! TTCTTTTGTCTATTTGTAAA+TGG + chr2.4:8278269-8278288 MS.gene31320:intron 20.0%
! AAAATGACATTATGGTTGTT+GGG + chr2.4:8278212-8278231 MS.gene31320:CDS 25.0%
! AAACTTAACTTTCACTCATT+AGG + chr2.4:8277575-8277594 MS.gene31320:CDS 25.0%
! AAAGAGAAAAGATAAAGCTA+AGG + chr2.4:8273896-8273915 MS.gene31320:intron 25.0%
! AATTTCCAATGAAGAAAAGA+GGG - chr2.4:8274815-8274834 None:intergenic 25.0%
! AGACTCATTACAAATTTATC+CGG + chr2.4:8274282-8274301 MS.gene31320:intron 25.0%
! ATAGGATAGAATGATTCAAT+AGG - chr2.4:8278581-8278600 None:intergenic 25.0%
! ATGTTGTAGAATACAGATAA+TGG - chr2.4:8276638-8276657 None:intergenic 25.0%
! ATTGTATATTACATATGCGT+TGG - chr2.4:8278030-8278049 None:intergenic 25.0%
! ATTTAGTTATCTCGTACATT+TGG - chr2.4:8277130-8277149 None:intergenic 25.0%
! CTATCCTATGTAACATATTA+TGG + chr2.4:8278592-8278611 MS.gene31320:intron 25.0%
! CTTCTTCTTGTGTATATATA+TGG - chr2.4:8278692-8278711 None:intergenic 25.0%
! TAAATGAAACATTCTCTAGT+TGG - chr2.4:8277694-8277713 None:intergenic 25.0%
! TAATGAGTGAAAGTTAAGTT+TGG - chr2.4:8277576-8277595 None:intergenic 25.0%
! TATATATACACAAGAAGAAG+TGG + chr2.4:8278692-8278711 MS.gene31320:CDS 25.0%
! TATGAAAGAAAGAAAAAGGA+AGG - chr2.4:8274205-8274224 None:intergenic 25.0%
! TCATCCATAATATGTTACAT+AGG - chr2.4:8278599-8278618 None:intergenic 25.0%
! TCATGTATAACACTAGTATT+TGG - chr2.4:8275346-8275365 None:intergenic 25.0%
! TGAAACAGAAATATTGTGAT+TGG + chr2.4:8275931-8275950 MS.gene31320:intron 25.0%
! TTACGATCGTATTATACATT+TGG + chr2.4:8276803-8276822 MS.gene31320:intron 25.0%
!! ACTATTTGGATTTTCCTTAT+CGG + chr2.4:8277883-8277902 MS.gene31320:CDS 25.0%
!! ATTTCTTTCTTGATGCATTT+TGG + chr2.4:8275099-8275118 MS.gene31320:intron 25.0%
!! TTTTTGTCGGATACTAAATT+GGG - chr2.4:8274308-8274327 None:intergenic 25.0%
!!! AAAAACATTGTTGGTGTTAA+TGG + chr2.4:8274525-8274544 MS.gene31320:intron 25.0%
!!! AGTCTGATATTTTTACACTA+AGG - chr2.4:8274413-8274432 None:intergenic 25.0%
!!! CTGTTTATTTTCACTTCTTT+AGG + chr2.4:8275819-8275838 MS.gene31320:intron 25.0%
!!! TTAACACCAACAATGTTTTT+TGG - chr2.4:8274525-8274544 None:intergenic 25.0%
!!! TTGGTTTTCTTCTAAAACAT+TGG + chr2.4:8275123-8275142 MS.gene31320:intron 25.0%
!!! TTTCTTGTTTTGCAAAATGT+TGG + chr2.4:8276402-8276421 MS.gene31320:intron 25.0%
!!! TTTTTTGTCGGATACTAAAT+TGG - chr2.4:8274309-8274328 None:intergenic 25.0%
AAATGACATTATGGTTGTTG+GGG + chr2.4:8278213-8278232 MS.gene31320:CDS 30.0%
AAATTTCGCCATATTTATCG+AGG + chr2.4:8275904-8275923 MS.gene31320:CDS 30.0%
AACATTCTCTAGTTGGAAAT+TGG - chr2.4:8277687-8277706 None:intergenic 30.0%
AACCAACCAAAAAACATTGT+TGG + chr2.4:8274516-8274535 MS.gene31320:intron 30.0%
AAGAAGAATACATGTTGCAA+TGG + chr2.4:8274580-8274599 MS.gene31320:intron 30.0%
ACACTAAGGATAAATTAGTC+TGG - chr2.4:8274399-8274418 None:intergenic 30.0%
ACAGAAATATTGTGATTGGT+TGG + chr2.4:8275935-8275954 MS.gene31320:intron 30.0%
ACTTTGTGTATATCACCATA+TGG - chr2.4:8277629-8277648 None:intergenic 30.0%
AGATTCATAGTTACCTTATG+AGG - chr2.4:8275394-8275413 None:intergenic 30.0%
CATACTAATCTTGCATCAAA+TGG + chr2.4:8277347-8277366 MS.gene31320:CDS 30.0%
CTTCATCTTATCTTGAACTA+TGG + chr2.4:8274695-8274714 MS.gene31320:intron 30.0%
GAAAATCCAAATAGTCTACA+AGG - chr2.4:8277878-8277897 None:intergenic 30.0%
GAAAATGACATTATGGTTGT+TGG + chr2.4:8278211-8278230 MS.gene31320:CDS 30.0%
GAATTTCCAATGAAGAAAAG+AGG - chr2.4:8274816-8274835 None:intergenic 30.0%
GTAAATCCTTGTAGACTATT+TGG + chr2.4:8277869-8277888 MS.gene31320:CDS 30.0%
TAACATCACTTCCAAAGAAA+GGG + chr2.4:8274737-8274756 MS.gene31320:intron 30.0%
TACATACTTGTGACACTATT+TGG + chr2.4:8275673-8275692 MS.gene31320:intron 30.0%
TATATCACCATATGGAAAAG+AGG - chr2.4:8277621-8277640 None:intergenic 30.0%
TATGGTGATATACACAAAGT+TGG + chr2.4:8277629-8277648 MS.gene31320:CDS 30.0%
TCATTGGAAATTCCAACATA+TGG + chr2.4:8274823-8274842 MS.gene31320:intron 30.0%
TCTTGTTCTACCATATTTGA+AGG - chr2.4:8274075-8274094 None:intergenic 30.0%
TGACAGTGAAAATGACATTA+TGG + chr2.4:8278204-8278223 MS.gene31320:CDS 30.0%
TGATACACATCATTGATGAA+TGG + chr2.4:8275209-8275228 MS.gene31320:intron 30.0%
TGATCTAAACCTTAACTCTT+GGG + chr2.4:8277505-8277524 MS.gene31320:CDS 30.0%
TTAACATCACTTCCAAAGAA+AGG + chr2.4:8274736-8274755 MS.gene31320:intron 30.0%
TTAGGACACAATAAGTTTAG+TGG - chr2.4:8277161-8277180 None:intergenic 30.0%
TTGATCTAAACCTTAACTCT+TGG + chr2.4:8277504-8277523 MS.gene31320:CDS 30.0%
TTGATTAAGCTCTCATCATT+TGG - chr2.4:8276910-8276929 None:intergenic 30.0%
TTTAGTAAAACTTACTGCCA+TGG - chr2.4:8278244-8278263 None:intergenic 30.0%
! AATGGTTTTCTAACTTACAC+TGG - chr2.4:8278443-8278462 None:intergenic 30.0%
! ACAAAGCAAATAAGAAGTGT+GGG + chr2.4:8273919-8273938 MS.gene31320:intron 30.0%
! AGAGTGTCAAAGGTTAATTT+AGG - chr2.4:8274337-8274356 None:intergenic 30.0%
! ATATCATTTTCATGTCTTGC+AGG + chr2.4:8276659-8276678 MS.gene31320:intron 30.0%
! ATTCTTCTTAACTTGAGTTG+TGG - chr2.4:8274569-8274588 None:intergenic 30.0%
! ATTTTCTGACCTGAAATTGT+TGG + chr2.4:8275772-8275791 MS.gene31320:intron 30.0%
! CAAAATTCCTCTTTTCCATA+TGG + chr2.4:8277611-8277630 MS.gene31320:CDS 30.0%
! CTTTTAGCATACTTTTGGTA+AGG - chr2.4:8276512-8276531 None:intergenic 30.0%
! GCTTATTTGAGTTTATCTAC+TGG + chr2.4:8275648-8275667 MS.gene31320:intron 30.0%
! TCAACCACAAATCTTTTGTA+GGG + chr2.4:8274849-8274868 MS.gene31320:intron 30.0%
! TGATGCTTTTAGCATACTTT+TGG - chr2.4:8276517-8276536 None:intergenic 30.0%
! TTATTTTCCACAAGGTCATT+TGG + chr2.4:8274771-8274790 MS.gene31320:intron 30.0%
! TTCAACCACAAATCTTTTGT+AGG + chr2.4:8274848-8274867 MS.gene31320:intron 30.0%
! TTCTTTGGAAGTGATGTTAA+AGG - chr2.4:8274736-8274755 None:intergenic 30.0%
!! AAAAGTATGCTAAAAGCATC+AGG + chr2.4:8276516-8276535 MS.gene31320:CDS 30.0%
!! AACATGAAACATGCTTTTTG+CGG - chr2.4:8276346-8276365 None:intergenic 30.0%
!! GTTGTAGTTTATTTTCCACA+AGG + chr2.4:8274763-8274782 MS.gene31320:intron 30.0%
!! TCTAAAACATTGGCAAGTTT+TGG + chr2.4:8275133-8275152 MS.gene31320:intron 30.0%
!!! CATCAATTTTTGGTTTGTGT+TGG + chr2.4:8273838-8273857 MS.gene31320:intron 30.0%
!!! TTTCTTGATGCATTTTGGTT+TGG + chr2.4:8275104-8275123 MS.gene31320:intron 30.0%
!!! TTTTTTGAGTTCAGCTATTG+AGG - chr2.4:8275274-8275293 None:intergenic 30.0%
AAACTGCGAGAAAATTGTGA+GGG + chr2.4:8274433-8274452 MS.gene31320:intron 35.0%
AACCTCATCATTCTCCTTAT+TGG - chr2.4:8275012-8275031 None:intergenic 35.0%
AAGATTGAATGTTCAAGGGA+GGG - chr2.4:8277036-8277055 None:intergenic 35.0%
AAGTGGAGAAGATGACAATT+GGG + chr2.4:8278709-8278728 MS.gene31320:CDS 35.0%
AATATATCCATTGAGATCCC+TGG + chr2.4:8277472-8277491 MS.gene31320:CDS 35.0%
ACAACCCTACAAAAGATTTG+TGG - chr2.4:8274856-8274875 None:intergenic 35.0%
ACCTGACAAAGATTACAACA+TGG - chr2.4:8275994-8276013 None:intergenic 35.0%
ACTACAACATTCCCTTTCTT+TGG - chr2.4:8274751-8274770 None:intergenic 35.0%
AGCTATCTGTGATATTACAC+AGG + chr2.4:8276934-8276953 MS.gene31320:intron 35.0%
AGTGAACTAGAGAGACTATT+TGG + chr2.4:8278130-8278149 MS.gene31320:CDS 35.0%
ATAAATGGCCCAAGTCAAAA+TGG + chr2.4:8276725-8276744 MS.gene31320:CDS 35.0%
ATGTGAGAAGCTAACTTTGT+AGG - chr2.4:8275503-8275522 None:intergenic 35.0%
ATTTGAAGGTAGTGAGAAGA+GGG - chr2.4:8274061-8274080 None:intergenic 35.0%
CGACAAGATTGAATGTTCAA+GGG - chr2.4:8277040-8277059 None:intergenic 35.0%
CTGGTTGTTATAATGAGTCT+CGG - chr2.4:8274380-8274399 None:intergenic 35.0%
CTTCTCACTACCTTCAAATA+TGG + chr2.4:8274062-8274081 MS.gene31320:intron 35.0%
GAAAACGGAGAGTTAAGATT+GGG + chr2.4:8276219-8276238 MS.gene31320:CDS 35.0%
GAAATTGTTGGAAAGTTCGA+AGG + chr2.4:8275784-8275803 MS.gene31320:intron 35.0%
GAATGAAGGTTCACAAACAA+GGG + chr2.4:8278050-8278069 MS.gene31320:intron 35.0%
GACAAAGCAAATAAGAAGTG+TGG + chr2.4:8273918-8273937 MS.gene31320:intron 35.0%
GATCTAAACCTTAACTCTTG+GGG + chr2.4:8277506-8277525 MS.gene31320:CDS 35.0%
GATTTAATGGCTGAAACAGA+TGG - chr2.4:8278303-8278322 None:intergenic 35.0%
TAAACTGCGAGAAAATTGTG+AGG + chr2.4:8274432-8274451 MS.gene31320:intron 35.0%
TAAGTTTGGTTGCATTATGC+AGG - chr2.4:8277562-8277581 None:intergenic 35.0%
TAGTGTCATACTCATACCAA+AGG - chr2.4:8275611-8275630 None:intergenic 35.0%
TATGACACTATGAGTCTGTT+TGG + chr2.4:8275621-8275640 MS.gene31320:intron 35.0%
TATTTGAAGGTAGTGAGAAG+AGG - chr2.4:8274062-8274081 None:intergenic 35.0%
TCATAGTTACCTTATGAGGT+AGG - chr2.4:8275390-8275409 None:intergenic 35.0%
TCCAACAGTAGTTAGAATCT+AGG + chr2.4:8278824-8278843 MS.gene31320:CDS 35.0%
TCCATGTTGTAATCTTTGTC+AGG + chr2.4:8275990-8276009 MS.gene31320:intron 35.0%
TCGAACTTTCCAACAATTTC+AGG - chr2.4:8275784-8275803 None:intergenic 35.0%
TCGACAAGATTGAATGTTCA+AGG - chr2.4:8277041-8277060 None:intergenic 35.0%
TCTCTATATAGGGGTGAAAA+CGG + chr2.4:8276204-8276223 MS.gene31320:intron 35.0%
TGAAAACGGAGAGTTAAGAT+TGG + chr2.4:8276218-8276237 MS.gene31320:CDS 35.0%
TGAACATTCAATCTTGTCGA+AGG + chr2.4:8277041-8277060 MS.gene31320:CDS 35.0%
TGAATGAAGGTTCACAAACA+AGG + chr2.4:8278049-8278068 MS.gene31320:intron 35.0%
TGACAAAAATTTCAACGCGA+AGG + chr2.4:8277847-8277866 MS.gene31320:CDS 35.0%
TGATGATAACCAGAGTTGTT+TGG + chr2.4:8278740-8278759 MS.gene31320:CDS 35.0%
TGCTCATGGATCTCTATATA+GGG + chr2.4:8276194-8276213 MS.gene31320:intron 35.0%
TTCAATAGGACAACTCATTC+AGG - chr2.4:8278567-8278586 None:intergenic 35.0%
TTCACCTACCTCGATAAATA+TGG - chr2.4:8275915-8275934 None:intergenic 35.0%
TTCTCTAGTTGGAAATTGGT+TGG - chr2.4:8277683-8277702 None:intergenic 35.0%
TTGGATTCATACCAGTGATA+AGG - chr2.4:8277111-8277130 None:intergenic 35.0%
TTTCCATTAACAGGCCAATA+AGG + chr2.4:8274995-8275014 MS.gene31320:intron 35.0%
! AGAGTTCTGTAGATTTTGTG+AGG - chr2.4:8277921-8277940 None:intergenic 35.0%
! ATTTGGATTTTCCTTATCGG+CGG + chr2.4:8277886-8277905 MS.gene31320:CDS 35.0%
! CATTTTGAATCTTGTCCCTA+TGG - chr2.4:8276552-8276571 None:intergenic 35.0%
! GATATACACAAAGTTGGTCA+AGG + chr2.4:8277635-8277654 MS.gene31320:CDS 35.0%
! GTGATTTGGATCCCTATAAA+TGG + chr2.4:8276710-8276729 MS.gene31320:CDS 35.0%
! TAGTTGGAAATTGGTTGGTT+TGG - chr2.4:8277678-8277697 None:intergenic 35.0%
! TGAACTGAGAGCTTTTGAAT+TGG + chr2.4:8276117-8276136 MS.gene31320:intron 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG + chr2.4:8275592-8275611 MS.gene31320:CDS 35.0%
! TGGTTACCAACAATTGATTC+AGG - chr2.4:8276279-8276298 None:intergenic 35.0%
! TTCATGTTTTCTACAGTCCA+AGG + chr2.4:8276358-8276377 MS.gene31320:CDS 35.0%
! TTCTAGTTATGCAGACTTCA+CGG + chr2.4:8277412-8277431 MS.gene31320:CDS 35.0%
! TTTGTCCCTCTTTTCTTCAT+TGG + chr2.4:8274807-8274826 MS.gene31320:intron 35.0%
!! AAGGTGCATCCGTTTTTAAT+TGG - chr2.4:8278383-8278402 None:intergenic 35.0%
!! TCCGTTTTTAATTGGTGTAC+CGG - chr2.4:8278375-8278394 None:intergenic 35.0%
!! TTTGACTTGGGCCATTTATA+GGG - chr2.4:8276724-8276743 None:intergenic 35.0%
!! TTTTGGTTGGTTCTTCTCTT+AGG - chr2.4:8274508-8274527 None:intergenic 35.0%
!!! AAGCATCTCCATTTTGACTT+GGG - chr2.4:8276736-8276755 None:intergenic 35.0%
!!! CAATTTTTGGTTTGTGTTGG+TGG + chr2.4:8273841-8273860 MS.gene31320:intron 35.0%
!!! CACCAACAATGTTTTTTGGT+TGG - chr2.4:8274521-8274540 None:intergenic 35.0%
!!! TTTTGACTTGGGCCATTTAT+AGG - chr2.4:8276725-8276744 None:intergenic 35.0%
AAAGGAAGGAGAGAAAGATG+AGG - chr2.4:8274191-8274210 None:intergenic 40.0%
AATACTCCTTCAGCTCAGAT+AGG + chr2.4:8277713-8277732 MS.gene31320:CDS 40.0%
ACACTAGTATTTGGATCCCA+AGG - chr2.4:8275337-8275356 None:intergenic 40.0%
ACTACTGTTGGAGAAGAATC+TGG - chr2.4:8278816-8278835 None:intergenic 40.0%
ACTAGAGAGACTATTTGGCA+TGG + chr2.4:8278135-8278154 MS.gene31320:CDS 40.0%
ACTTGTTCCAAATGACCTTG+TGG - chr2.4:8274781-8274800 None:intergenic 40.0%
AGATGAGGTGGAAATGAATG+AGG - chr2.4:8274176-8274195 None:intergenic 40.0%
AGTGACTGGAATGAGTGATT+TGG + chr2.4:8276696-8276715 MS.gene31320:CDS 40.0%
ATAAAACAAACCTCTGCCTG+TGG - chr2.4:8275056-8275075 None:intergenic 40.0%
ATACCAGTGATAAGGTGACT+GGG - chr2.4:8277103-8277122 None:intergenic 40.0%
ATAGAGATCCATGAGCAGTA+AGG - chr2.4:8276191-8276210 None:intergenic 40.0%
ATCAAGATAGAGTCTCTCCT+TGG + chr2.4:8276987-8277006 MS.gene31320:CDS 40.0%
ATTGAGCAGCTACAATGATC+TGG + chr2.4:8278105-8278124 MS.gene31320:CDS 40.0%
ATTGTTGGAAAGTTCGAAGG+TGG + chr2.4:8275787-8275806 MS.gene31320:intron 40.0%
ATTTCTTCACTGAGACCCTT+TGG - chr2.4:8273869-8273888 None:intergenic 40.0%
CAAGATTGAATGTTCAAGGG+AGG - chr2.4:8277037-8277056 None:intergenic 40.0%
CACTATGAGTCTGTTTGGAT+TGG + chr2.4:8275626-8275645 MS.gene31320:intron 40.0%
CCCGGTACACCAATTAAAAA+CGG + chr2.4:8278371-8278390 MS.gene31320:intron 40.0%
CCTTTGACACTCTTATATCG+AGG + chr2.4:8274344-8274363 MS.gene31320:intron 40.0%
CCTTTGTCGAATTTCTCCTT+GGG + chr2.4:8275318-8275337 MS.gene31320:intron 40.0%
CTGCTCATGGATCTCTATAT+AGG + chr2.4:8276193-8276212 MS.gene31320:intron 40.0%
GAACTAGAAGATGAACATGC+TGG - chr2.4:8274658-8274677 None:intergenic 40.0%
GAAGTGGAGAAGATGACAAT+TGG + chr2.4:8278708-8278727 MS.gene31320:CDS 40.0%
GAATGATGAGGTTTACACAC+AGG + chr2.4:8275019-8275038 MS.gene31320:CDS 40.0%
GCTCAATCTTGAGAGATCAA+TGG - chr2.4:8278092-8278111 None:intergenic 40.0%
GCTCATGGATCTCTATATAG+GGG + chr2.4:8276195-8276214 MS.gene31320:intron 40.0%
GGTCTTCCTGAATCAATTGT+TGG + chr2.4:8276270-8276289 MS.gene31320:CDS 40.0%
GTCAAAATGGAGATGCTTGA+TGG + chr2.4:8276738-8276757 MS.gene31320:CDS 40.0%
GTGAAGTCTGCATAACTAGA+AGG - chr2.4:8277413-8277432 None:intergenic 40.0%
GTGTATGTTCCAAACAACTC+TGG - chr2.4:8278752-8278771 None:intergenic 40.0%
GTTATAGCTGACCTTCTTTC+TGG - chr2.4:8276596-8276615 None:intergenic 40.0%
TAAGAGATCCTGACAAAGGA+TGG + chr2.4:8278167-8278186 MS.gene31320:CDS 40.0%
TACTTCTTCCGAGTTTACGA+GGG + chr2.4:8277382-8277401 MS.gene31320:CDS 40.0%
TAGCATTAGCCACTGAAGAA+AGG - chr2.4:8276320-8276339 None:intergenic 40.0%
TATCCGCTAATCAAGTACCT+TGG - chr2.4:8276378-8276397 None:intergenic 40.0%
TCAAGATAGAGTCTCTCCTT+GGG + chr2.4:8276988-8277007 MS.gene31320:CDS 40.0%
TCCTAGTTTCCTTTCTTCAG+TGG + chr2.4:8276308-8276327 MS.gene31320:CDS 40.0%
TCCTTTGTCGAATTTCTCCT+TGG + chr2.4:8275317-8275336 MS.gene31320:intron 40.0%
TGAAGATACAAGAGCTGAAG+TGG - chr2.4:8274680-8274699 None:intergenic 40.0%
TGAGTCTATAAGATCGACCA+AGG + chr2.4:8277229-8277248 MS.gene31320:CDS 40.0%
TGATATTACACAGGTCCGAT+GGG + chr2.4:8276943-8276962 MS.gene31320:intron 40.0%
TGCTAAAAGAAGTTGCACGA+AGG + chr2.4:8277940-8277959 MS.gene31320:CDS 40.0%
TGGATGAATCTCCAGAAAGA+AGG + chr2.4:8276582-8276601 MS.gene31320:CDS 40.0%
TGTCATACTCATACCAAAGG+AGG - chr2.4:8275608-8275627 None:intergenic 40.0%
TGTGGTTGAAGACCATATGT+TGG - chr2.4:8274838-8274857 None:intergenic 40.0%
TGTGTTGCATTCAGTTAGCA+GGG + chr2.4:8275414-8275433 MS.gene31320:intron 40.0%
TTACTTCTTCCGAGTTTACG+AGG + chr2.4:8277381-8277400 MS.gene31320:CDS 40.0%
TTCGCCATATTTATCGAGGT+AGG + chr2.4:8275908-8275927 MS.gene31320:intron 40.0%
TTCTTTGCTCCTACCTCATA+AGG + chr2.4:8275378-8275397 MS.gene31320:intron 40.0%
TTGGTAAGGCACAACGAAAT+CGG - chr2.4:8276498-8276517 None:intergenic 40.0%
TTGTGTTGCATTCAGTTAGC+AGG + chr2.4:8275413-8275432 MS.gene31320:intron 40.0%
TTTGCAACAAGCTCTTGAGA+GGG - chr2.4:8275862-8275881 None:intergenic 40.0%
! ACATACACCATTGATTGTGG+AGG + chr2.4:8278764-8278783 MS.gene31320:CDS 40.0%
! AGCCAGAAGAATCTTGTTTC+TGG + chr2.4:8276059-8276078 MS.gene31320:CDS 40.0%
! AGTCCAAGGTACTTGATTAG+CGG + chr2.4:8276372-8276391 MS.gene31320:intron 40.0%
! ATGCGTTGGCAAATTGTCAA+AGG - chr2.4:8278016-8278035 None:intergenic 40.0%
! CATTTTCACTGTCAGTGTAG+AGG - chr2.4:8278198-8278217 None:intergenic 40.0%
! CTTCTAAGAGATCCTGACAA+AGG + chr2.4:8278163-8278182 MS.gene31320:CDS 40.0%
! GCCAGAAGAATCTTGTTTCT+GGG + chr2.4:8276060-8276079 MS.gene31320:CDS 40.0%
! GGAACATACACCATTGATTG+TGG + chr2.4:8278761-8278780 MS.gene31320:CDS 40.0%
! GTTCTGTAGATTTTGTGAGG+TGG - chr2.4:8277918-8277937 None:intergenic 40.0%
! TCTCCTTATTGGCCTGTTAA+TGG - chr2.4:8275001-8275020 None:intergenic 40.0%
! TGAAGGAGAGTGTAATGAAG+TGG - chr2.4:8274231-8274250 None:intergenic 40.0%
! TTTGAAGCCTCCACAATCAA+TGG - chr2.4:8278774-8278793 None:intergenic 40.0%
! TTTTGCAACAAGCTCTTGAG+AGG - chr2.4:8275863-8275882 None:intergenic 40.0%
!! CCAGAAGAATCTTGTTTCTG+GGG + chr2.4:8276061-8276080 MS.gene31320:CDS 40.0%
!! CCGTTTTTAATTGGTGTACC+GGG - chr2.4:8278374-8278393 None:intergenic 40.0%
!! CCTCGATATAAGAGTGTCAA+AGG - chr2.4:8274347-8274366 None:intergenic 40.0%
!! TGGTTTTACCCCAAGAGTTA+AGG - chr2.4:8277517-8277536 None:intergenic 40.0%
!!! ACAGGCAGAGGTTTGTTTTA+TGG + chr2.4:8275055-8275074 MS.gene31320:intron 40.0%
!!! CAAGCATCTCCATTTTGACT+TGG - chr2.4:8276737-8276756 None:intergenic 40.0%
AATCTTGTCCCTATGGTCAG+TGG - chr2.4:8276545-8276564 None:intergenic 45.0%
AATCTTTGTCAGGTCAGCCA+AGG + chr2.4:8276000-8276019 MS.gene31320:intron 45.0%
AATGCACCTATCTGAGCTGA+AGG - chr2.4:8277722-8277741 None:intergenic 45.0%
ACAGCAGACAATCGAAGTCA+AGG - chr2.4:8278402-8278421 None:intergenic 45.0%
AGAACTCACTGCAGGCAAAA+GGG - chr2.4:8278650-8278669 None:intergenic 45.0%
AGGATTCTCCATCCTTTGTC+AGG - chr2.4:8278178-8278197 None:intergenic 45.0%
ATCTTGTCCCTATGGTCAGT+GGG - chr2.4:8276544-8276563 None:intergenic 45.0%
ATGTCTTGCAGGTGTAGTAG+CGG + chr2.4:8276670-8276689 MS.gene31320:intron 45.0%
CACAAACAAGGGAGCTTAGT+TGG + chr2.4:8278061-8278080 MS.gene31320:CDS 45.0%
CATAACACAGAACTCACTGC+AGG - chr2.4:8278658-8278677 None:intergenic 45.0%
CATACCAGTGATAAGGTGAC+TGG - chr2.4:8277104-8277123 None:intergenic 45.0%
CCCAAGGAGAAATTCGACAA+AGG - chr2.4:8275321-8275340 None:intergenic 45.0%
CCCCAGAAACAAGATTCTTC+TGG - chr2.4:8276064-8276083 None:intergenic 45.0%
CCTCAATATCCTCATCCCAT+CGG - chr2.4:8276961-8276980 None:intergenic 45.0%
CTGCAGTGAGTTCTGTGTTA+TGG + chr2.4:8278656-8278675 MS.gene31320:intron 45.0%
CTTCTCTAGGTGCAAACTTG+AGG + chr2.4:8277816-8277835 MS.gene31320:CDS 45.0%
CTTGTTGCAAAAGACCTGCA+TGG + chr2.4:8275871-8275890 MS.gene31320:CDS 45.0%
GAGAGACTATTTGGCATGGA+AGG + chr2.4:8278139-8278158 MS.gene31320:CDS 45.0%
GATTCAGGAAGACCGTTTCT+CGG - chr2.4:8276264-8276283 None:intergenic 45.0%
GCCACTGAAGAAAGGAAACT+AGG - chr2.4:8276312-8276331 None:intergenic 45.0%
GCTTCAAAGTCTTCCTCAGT+GGG + chr2.4:8278786-8278805 MS.gene31320:CDS 45.0%
GGAAACTAGGAGAACAACTC+TGG - chr2.4:8276299-8276318 None:intergenic 45.0%
GGCCAATAAGGAGAATGATG+AGG + chr2.4:8275007-8275026 MS.gene31320:intron 45.0%
GGCTATGACTTATGTTGTCC+CGG + chr2.4:8278353-8278372 MS.gene31320:intron 45.0%
GTCGTCGGATCATCATTCAA+TGG + chr2.4:8278494-8278513 MS.gene31320:intron 45.0%
GTGATATTACACAGGTCCGA+TGG + chr2.4:8276942-8276961 MS.gene31320:intron 45.0%
GTTCATCCAGAATGAGTCGT+CGG + chr2.4:8278479-8278498 MS.gene31320:intron 45.0%
TAGATCAACCTTTCCTGCCA+GGG - chr2.4:8277492-8277511 None:intergenic 45.0%
TCAGTTAGCAGGGATGTGTT+TGG + chr2.4:8275424-8275443 MS.gene31320:intron 45.0%
TGAGAAGAGGGAACAGGAAA+AGG - chr2.4:8274049-8274068 None:intergenic 45.0%
TGTAGTAGCGGTATAGTGAC+TGG + chr2.4:8276682-8276701 MS.gene31320:CDS 45.0%
TGTCGGATACTAAATTGGGC+CGG - chr2.4:8274304-8274323 None:intergenic 45.0%
TGTGTGTGTGAGTGTGTGTT+GGG - chr2.4:8273974-8273993 None:intergenic 45.0%
TTAGATCAACCTTTCCTGCC+AGG - chr2.4:8277493-8277512 None:intergenic 45.0%
TTCTTGACCTTGCAAGACCT+TGG - chr2.4:8277249-8277268 None:intergenic 45.0%
TTGGATGACAAAGAGCCTGA+AGG + chr2.4:8275443-8275462 MS.gene31320:CDS 45.0%
! ACAGGTTACTTTGCTTCCAC+AGG + chr2.4:8275037-8275056 MS.gene31320:CDS 45.0%
! ATTTCTGCTGCTGCTTCTCT+AGG + chr2.4:8277803-8277822 MS.gene31320:CDS 45.0%
! TAGAAAGGCGTACGCTTCAA+CGG - chr2.4:8276863-8276882 None:intergenic 45.0%
! TTTGTGTTGGTGGAGCCAAA+GGG + chr2.4:8273851-8273870 MS.gene31320:intron 45.0%
AAGGCTGAAGAAACTGCGGA+CGG + chr2.4:8277060-8277079 MS.gene31320:CDS 50.0%
AAGGGAGGGAGAGAAGTAGA+CGG - chr2.4:8277022-8277041 None:intergenic 50.0%
AGAAAACCCTCCATGAGTGC+TGG - chr2.4:8275555-8275574 None:intergenic 50.0%
AGATCGACCAAGGTCTTGCA+AGG + chr2.4:8277239-8277258 MS.gene31320:CDS 50.0%
AGGCTGAACCCTCGTAAACT+CGG - chr2.4:8277393-8277412 None:intergenic 50.0%
AGGTAGTGAGAAGAGGGAAC+AGG - chr2.4:8274055-8274074 None:intergenic 50.0%
AGGTTTAGAAGCAGGTGGAG+AGG + chr2.4:8275463-8275482 MS.gene31320:CDS 50.0%
ATCAGGAACCCACTGACCAT+AGG + chr2.4:8276533-8276552 MS.gene31320:CDS 50.0%
ATTGAGATCCCTGGCAGGAA+AGG + chr2.4:8277481-8277500 MS.gene31320:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG - chr2.4:8275888-8275907 None:intergenic 50.0%
CAGAACTCACTGCAGGCAAA+AGG - chr2.4:8278651-8278670 None:intergenic 50.0%
CAGACTTCACGGAAACGAAC+CGG + chr2.4:8277423-8277442 MS.gene31320:CDS 50.0%
CCACCTGCTTCTAAACCTTC+AGG - chr2.4:8275461-8275480 None:intergenic 50.0%
CCGATGGGATGAGGATATTG+AGG + chr2.4:8276958-8276977 MS.gene31320:CDS 50.0%
CCTGAAGGTTTAGAAGCAGG+TGG + chr2.4:8275458-8275477 MS.gene31320:CDS 50.0%
CCTGCAGCTTCTGCTTGTTT+CGG - chr2.4:8277778-8277797 None:intergenic 50.0%
CTGATACCAGCACTCATGGA+GGG + chr2.4:8275546-8275565 MS.gene31320:CDS 50.0%
CTTGCAAGACCCTAGGAAAC+CGG - chr2.4:8277445-8277464 None:intergenic 50.0%
GAACTATGGCATGCTTGTGC+TGG + chr2.4:8274709-8274728 MS.gene31320:intron 50.0%
GAGCCTGAAGGTTTAGAAGC+AGG + chr2.4:8275455-8275474 MS.gene31320:CDS 50.0%
GATGATCCGACGACTCATTC+TGG - chr2.4:8278488-8278507 None:intergenic 50.0%
GCAGTGTACCTTACTGCTCA+TGG + chr2.4:8276180-8276199 MS.gene31320:intron 50.0%
GCGATGAAGATGGGGTGATT+AGG - chr2.4:8277179-8277198 None:intergenic 50.0%
GGAAGGAGAGAAAGATGAGG+TGG - chr2.4:8274188-8274207 None:intergenic 50.0%
GGCTTCAAAGTCTTCCTCAG+TGG + chr2.4:8278785-8278804 MS.gene31320:CDS 50.0%
GGTTTAGAAGCAGGTGGAGA+GGG + chr2.4:8275464-8275483 MS.gene31320:CDS 50.0%
GTCGAAGGCTGAAGAAACTG+CGG + chr2.4:8277056-8277075 MS.gene31320:CDS 50.0%
GTGTGTGTGTGAGTGTGTGT+TGG - chr2.4:8273975-8273994 None:intergenic 50.0%
TACTTTGCTTCCACAGGCAG+AGG + chr2.4:8275043-8275062 MS.gene31320:CDS 50.0%
TATCCATTGAGATCCCTGGC+AGG + chr2.4:8277476-8277495 MS.gene31320:CDS 50.0%
TCACCCAGTCACCTTATCAC+TGG + chr2.4:8277097-8277116 MS.gene31320:CDS 50.0%
TCAGGAACCCACTGACCATA+GGG + chr2.4:8276534-8276553 MS.gene31320:CDS 50.0%
TCTCCAGCTGCGATGAAGAT+GGG - chr2.4:8277188-8277207 None:intergenic 50.0%
TCTGATACCAGCACTCATGG+AGG + chr2.4:8275545-8275564 MS.gene31320:CDS 50.0%
TCTTGACCTTGCAAGACCCT+AGG - chr2.4:8277452-8277471 None:intergenic 50.0%
TGAGCAGTAAGGTACACTGC+AGG - chr2.4:8276180-8276199 None:intergenic 50.0%
TGCAAAAGACCTGCATGGTG+TGG + chr2.4:8275876-8275895 MS.gene31320:CDS 50.0%
TGGTTGTTGGGGATGATCCA+TGG + chr2.4:8278224-8278243 MS.gene31320:CDS 50.0%
TGTGTGAGTGTGTGTTGGGT+GGG - chr2.4:8273970-8273989 None:intergenic 50.0%
TTTCCTGCCAGGGATCTCAA+TGG - chr2.4:8277482-8277501 None:intergenic 50.0%
! AGCTGGAGACAGTGGGTTTA+TGG + chr2.4:8277199-8277218 MS.gene31320:intron 50.0%
! GGAAACGAACCGGTTTCCTA+GGG + chr2.4:8277433-8277452 MS.gene31320:CDS 50.0%
! GTTTGTGTTGGTGGAGCCAA+AGG + chr2.4:8273850-8273869 MS.gene31320:intron 50.0%
! TGGATTTTCCTTATCGGCGG+CGG + chr2.4:8277889-8277908 MS.gene31320:CDS 50.0%
!! TCCATGAGTGCTGGTATCAG+AGG - chr2.4:8275546-8275565 None:intergenic 50.0%
AAGACCTGCATGGTGTGGAG+TGG + chr2.4:8275881-8275900 MS.gene31320:CDS 55.0%
AGAATCTGGCTGTCCCACTG+AGG - chr2.4:8278802-8278821 None:intergenic 55.0%
AGAGCTGCTCGACCGAGAAA+CGG + chr2.4:8276249-8276268 MS.gene31320:CDS 55.0%
AGGCTGAAGAAACTGCGGAC+GGG + chr2.4:8277061-8277080 MS.gene31320:CDS 55.0%
CAATCTTCAGCAGCTCGACG+AGG - chr2.4:8275581-8275600 None:intergenic 55.0%
CCGAAACAAGCAGAAGCTGC+AGG + chr2.4:8277775-8277794 MS.gene31320:CDS 55.0%
CGGTTTCCTAGGGTCTTGCA+AGG + chr2.4:8277443-8277462 MS.gene31320:CDS 55.0%
CTCCAGCTGCGATGAAGATG+GGG - chr2.4:8277187-8277206 None:intergenic 55.0%
CTTTGTCAGGTCAGCCAAGG+AGG + chr2.4:8276003-8276022 MS.gene31320:intron 55.0%
GCCTCTGATACCAGCACTCA+TGG + chr2.4:8275542-8275561 MS.gene31320:CDS 55.0%
GGGACGCAGTGCTCTTTCTA+AGG + chr2.4:8276081-8276100 MS.gene31320:CDS 55.0%
GTACGCTTCAACGGCACAGT+TGG - chr2.4:8276854-8276873 None:intergenic 55.0%
GTAGACGGATCGATCTCCCA+AGG - chr2.4:8277007-8277026 None:intergenic 55.0%
GTAGTGAGCAGATGCCTCCT+TGG - chr2.4:8276020-8276039 None:intergenic 55.0%
GTCTCCAGCTGCGATGAAGA+TGG - chr2.4:8277189-8277208 None:intergenic 55.0%
GTGTGAGTGTGTGTTGGGTG+GGG - chr2.4:8273969-8273988 None:intergenic 55.0%
GTGTGTGAGTGTGTGTTGGG+TGG - chr2.4:8273971-8273990 None:intergenic 55.0%
TACACAGGTCCGATGGGATG+AGG + chr2.4:8276949-8276968 MS.gene31320:intron 55.0%
TCATCGCAGCTGGAGACAGT+GGG + chr2.4:8277192-8277211 MS.gene31320:intron 55.0%
TGTGAGTGTGTGTTGGGTGG+GGG - chr2.4:8273968-8273987 None:intergenic 55.0%
TTCATCGCAGCTGGAGACAG+TGG + chr2.4:8277191-8277210 MS.gene31320:intron 55.0%
! CGGAAACGAACCGGTTTCCT+AGG + chr2.4:8277432-8277451 MS.gene31320:CDS 55.0%
!! AGGAGGCATCTGCTCACTAC+TGG + chr2.4:8276020-8276039 MS.gene31320:CDS 55.0%
CACCCCATCTTCATCGCAGC+TGG + chr2.4:8277182-8277201 MS.gene31320:intron 60.0%
GAAGCAGGTGGAGAGGGAGA+TGG + chr2.4:8275470-8275489 MS.gene31320:CDS 60.0%
GGCATCTGCTCACTACTGGC+TGG + chr2.4:8276024-8276043 MS.gene31320:CDS 60.0%
GTGAGTGTGTGTTGGGTGGG+GGG - chr2.4:8273967-8273986 None:intergenic 60.0%
GGTGGTTTCCGCCGCCGATA+AGG - chr2.4:8277900-8277919 None:intergenic 65.0%
GTGTGTTGGGTGGGGGGACA+AGG - chr2.4:8273961-8273980 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 8273752 8278845 8273752 ID=MS.gene31320
chr2.4 mRNA 8273752 8278845 8273752 ID=MS.gene31320.t1;Parent=MS.gene31320
chr2.4 exon 8273752 8273792 8273752 ID=MS.gene31320.t1.exon1;Parent=MS.gene31320.t1
chr2.4 CDS 8273752 8273792 8273752 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8274870 8274891 8274870 ID=MS.gene31320.t1.exon2;Parent=MS.gene31320.t1
chr2.4 CDS 8274870 8274891 8274870 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8275008 8275064 8275008 ID=MS.gene31320.t1.exon3;Parent=MS.gene31320.t1
chr2.4 CDS 8275008 8275064 8275008 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8275428 8275613 8275428 ID=MS.gene31320.t1.exon4;Parent=MS.gene31320.t1
chr2.4 CDS 8275428 8275613 8275428 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8275841 8275925 8275841 ID=MS.gene31320.t1.exon5;Parent=MS.gene31320.t1
chr2.4 CDS 8275841 8275925 8275841 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8276012 8276102 8276012 ID=MS.gene31320.t1.exon6;Parent=MS.gene31320.t1
chr2.4 CDS 8276012 8276102 8276012 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8276215 8276379 8276215 ID=MS.gene31320.t1.exon7;Parent=MS.gene31320.t1
chr2.4 CDS 8276215 8276379 8276215 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8276484 8276603 8276484 ID=MS.gene31320.t1.exon8;Parent=MS.gene31320.t1
chr2.4 CDS 8276484 8276603 8276484 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8276681 8276759 8276681 ID=MS.gene31320.t1.exon9;Parent=MS.gene31320.t1
chr2.4 CDS 8276681 8276759 8276681 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8276956 8277118 8276956 ID=MS.gene31320.t1.exon10;Parent=MS.gene31320.t1
chr2.4 CDS 8276956 8277118 8276956 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8277201 8277961 8277201 ID=MS.gene31320.t1.exon11;Parent=MS.gene31320.t1
chr2.4 CDS 8277201 8277961 8277201 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8278058 8278248 8278058 ID=MS.gene31320.t1.exon12;Parent=MS.gene31320.t1
chr2.4 CDS 8278058 8278248 8278058 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
chr2.4 exon 8278662 8278845 8278662 ID=MS.gene31320.t1.exon13;Parent=MS.gene31320.t1
chr2.4 CDS 8278662 8278845 8278662 ID=cds.MS.gene31320.t1;Parent=MS.gene31320.t1
Gene Sequence

>MS.gene31320

ATGAGCACAATATATATGATATTTCATAACAAACTTAAAAGGTAACAAAAAATGTGTTAAATTTTGTTTTTATCAAATAAATGAAACATCAATTTTTGGTTTGTGTTGGTGGAGCCAAAGGGTCTCAGTGAAGAAATTTTGAAAAAAGAGAAAAGATAAAGCTAAGGACAAAGCAAATAAGAAGTGTGGGTTCTGTTGCTATCTTACCTTGTCCCCCCACCCAACACACACTCACACACACACAACAAGTACAAAAGCCACTAACAAAATTAACTTTTGATACAATTGTCTATTCCTTTTCCTGTTCCCTCTTCTCACTACCTTCAAATATGGTAGAACAAGAATCATATCACTTTGAATTTCTTGTTATTATTTGACACTCTTTGTTTTCACTTTTTTCATTATTTGATATTTGATTTGGCCTCATTCATTTCCACCTCATCTTTCTCTCCTTCCTTTTTCTTTCTTTCATAAATCCACTTCATTACACTCTCCTTCACTTTTATCTTTCTTTTTTCTTTTTTTTTCAAAGACTCATTACAAATTTATCCGGCCCAATTTAGTATCCGACAAAAAATAATACCTAAATTAACCTTTGACACTCTTATATCGAGGATAAATTAGTCCGAGACTCATTATAACAACCAGACTAATTTATCCTTAGTGTAAAAATATCAGACTAAACTGCGAGAAAATTGTGAGGGATCATTGATTCATTAGTCTTTTTATATTCTGATAGATTCTCATTTGAGTCCTAAGAGAAGAACCAACCAAAAAACATTGTTGGTGTTAATGGATATTGATCTGAATGATTCCACAACTCAAGTTAAGAAGAATACATGTTGCAATGGTGAATGTGAGAAAAGTGTTTGTTGTGTTTGCACTTTATCTTCTTCTTCATCACCAGCATGTTCATCTTCTAGTTCCACTTCAGCTCTTGTATCTTCATCTTATCTTGAACTATGGCATGCTTGTGCTGGACCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTAGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCCCTCTTTTCTTCATTGGAAATTCCAACATATGGTCTTCAACCACAAATCTTTTGTAGGGTTGTCAATGTTCAACTACTTGTAAGCACTTAAACTGAGTTACTTTACTCTTTCATTGAATTGTATATGCTTAATTCACATAGACTTTTTTCATTTGATTTTGTTTAATATTTTCTGTATATTTTTTCCATTAACAGGCCAATAAGGAGAATGATGAGGTTTACACACAGGTTACTTTGCTTCCACAGGCAGAGGTTTGTTTTATGGTTTAACATATTTGGTCTTGTTATTTCTTTCTTGATGCATTTTGGTTTGGTTTTCTTCTAAAACATTGGCAAGTTTTGGAATCTTATTGTTTTTTTGCAAGTTATAGATTTATAAAAAATGTACTTAACAATTGATACACATCATTGATGAATGGCTAATGTGATATTGTGATTTATCATTAAACTTTGTTGATCCTCAATAGCTGAACTCAAAAAATTATAAATCATAACTTCATAGATTCCTTTGTCGAATTTCTCCTTGGGATCCAAATACTAGTGTTATACATGATGCAGCAATTGCTTCTTTGCTCCTACCTCATAAGGTAACTATGAATCTTGTGTTGCATTCAGTTAGCAGGGATGTGTTTGGATGACAAAGAGCCTGAAGGTTTAGAAGCAGGTGGAGAGGGAGATGGAAGATCGCCTACAAAGTTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGCACTCATGGAGGGTTTTCTGTTCCTCGTCGAGCTGCTGAAGATTGTTTTCCTCCTTTGGTATGAGTATGACACTATGAGTCTGTTTGGATTGGCTTATTTGAGTTTATCTACTGGCATACATACTTGTGACACTATTTGGAAGAACATATAAAAGTAGCTTATAATGACATGTCTGTCAGCTATTTTCAGCTTATTTTCATTAGCTAATTTATTTAATTTTCTGACCTGAAATTGTTGGAAAGTTCGAAGGTGGTGATGAATTCTGTTTATTTTCACTTCTTTAGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATCGAGGTAGGTGAAACAGAAATATTGTGATTGGTTGGATTCAAATATTGACAATGAATGAAACAGAAATTCCATGTTGTAATCTTTGTCAGGTCAGCCAAGGAGGCATCTGCTCACTACTGGCTGGAGTACTTTTGTTAGCCAGAAGAATCTTGTTTCTGGGGACGCAGTGCTCTTTCTAAGGTGTGTGTTTGTGTTGAACTGAGAGCTTTTGAATTGGCATTAATCTGTATATGCTAGATATTTCATATGTTGTTCCTGCAGTGTACCTTACTGCTCATGGATCTCTATATAGGGGTGAAAACGGAGAGTTAAGATTGGGAATCAGAAGAGCTGCTCGACCGAGAAACGGTCTTCCTGAATCAATTGTTGGTAACCAGAGTTGTTCTCCTAGTTTCCTTTCTTCAGTGGCTAATGCTATCTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGTACTTGATTAGCGGATACAGTTTTCTTGTTTTGCAAAATGTTGGATAAAGAGTTATTTTATCCCACATGTATATTTAATATGTTTGAATTTGATGTAATACAGAGCTAGACATGCCGATTTCGTTGTGCCTTACCAAAAGTATGCTAAAAGCATCAGGAACCCACTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGAAAGAAGGTCAGCTATAACATTAGTTATACATGTTTAGCCATTATCTGTATTCTACAACATGATATCATTTTCATGTCTTGCAGGTGTAGTAGCGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCCAAGTCAAAATGGAGATGCTTGATGGTATATTTTCTACTTTCTTTATACACTAATACTATGCAGTATGTTACGATCGTATTATACATTTGGTATTTGCTATAGATATTTATCATCACCAACTGTGCCGTTGAAGCGTACGCCTTTCTAAACATTACATTAATATATTAATAACCAAATGATGAGAGCTTAATCAATAAAAGCTATCTGTGATATTACACAGGTCCGATGGGATGAGGATATTGAGGCTAATCATCAAGATAGAGTCTCTCCTTGGGAGATCGATCCGTCTACTTCTCTCCCTCCCTTGAACATTCAATCTTGTCGAAGGCTGAAGAAACTGCGGACGGGTCTGCAAGTTGAATCACCCAGTCACCTTATCACTGGTATGAATCCAAATGTACGAGATAACTAAATAACATTAACCACTAAACTTATTGTGTCCTAATCACCCCATCTTCATCGCAGCTGGAGACAGTGGGTTTATGGACTTTGATGAGTCTATAAGATCGACCAAGGTCTTGCAAGGTCAAGAAAAAACAAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGAAAGAATTTGATATCAATTCTCTAAGACATACTAATCTTGCATCAAATGGAGCAAGAAAGATTACTTCTTCCGAGTTTACGAGGGTTCAGCCTTCTAGTTATGCAGACTTCACGGAAACGAACCGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATATCCATTGAGATCCCTGGCAGGAAAGGTTGATCTAAACCTTAACTCTTGGGGTAAAACCAATGTTAGTTACACAAATTATAACCTGCATAATGCAACCAAACTTAACTTTCACTCATTAGGATCAGAAGTTCTTCAAAATTCCTCTTTTCCATATGGTGATATACACAAAGTTGGTCAAGGTAGCAGCATGCTGTGCTCCAAACCAACCAATTTCCAACTAGAGAATGTTTCATTTAATACTCCTTCAGCTCAGATAGGTGCATTGAGAAATGAAGTTGGAATATCAGGTTTCACAATCCGAAACAAGCAGAAGCTGCAGGACAATATTTCTGCTGCTGCTTCTCTAGGTGCAAACTTGAGGATTTCAAATGACAAAAATTTCAACGCGAAGGTAAATCCTTGTAGACTATTTGGATTTTCCTTATCGGCGGCGGAAACCACCTCACAAAATCTACAGAACTCTGCTAAAAGAAGTTGCACGAAGGTGAGCGACGATAGCAACCGAGTTATATTGTGATATGAATTTTTCTCTATTCCTTTGACAATTTGCCAACGCATATGTAATATACAATGAATGAAGGTTCACAAACAAGGGAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGATTGAGCAGCTACAATGATCTGGTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGTCTTCTAAGAGATCCTGACAAAGGATGGAGAATCCTCTACACTGACAGTGAAAATGACATTATGGTTGTTGGGGATGATCCATGGCAGTAAGTTTTACTAAAAATGCTTCTTTTGTCTATTTGTAAATGGTATACACACCATCTGTTTCAGCCATTAAATCAGTATAAATATTTCAAAATATCGATCTAATGGCTATGACTTATGTTGTCCCGGTACACCAATTAAAAACGGATGCACCTTGACTTCGATTGTCTGCTGTAACAATATCACACATTCACCAGTGTAAGTTAGAAAACCATTGAATAAATATCATATGGTTCATCCAGAATGAGTCGTCGGATCATCATTCAATGGTTTTTTTGACTGACTGTGCCTTGTGATATTATATTTCAAATGTCGGGCCTGAATGAGTTGTCCTATTGAATCATTCTATCCTATGTAACATATTATGGATGATATGATACATACTGAAAAAATACACTCACCCTTTTGCCTGCAGTGAGTTCTGTGTTATGGTATCAAAAATCCATATATATACACAAGAAGAAGTGGAGAAGATGACAATTGGGATGATGAATGATGATAACCAGAGTTGTTTGGAACATACACCATTGATTGTGGAGGCTTCAAAGTCTTCCTCAGTGGGACAGCCAGATTCTTCTCCAACAGTAGTTAGAATCTAG
Protein sequence

>MS.gene31320.t1

MSTIYMIFHNKLKRVVNVQLLANKENDEVYTQVTLLPQAELAGMCLDDKEPEGLEAGGEGDGRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSTFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCSPSFLSSVANAISAKSMFHVFYSPRARHADFVVPYQKYAKSIRNPLTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEANHQDRVSPWEIDPSTSLPPLNIQSCRRLKKLRTGLQVESPSHLITAGDSGFMDFDESIRSTKVLQGQEKTSFMSLYYGCDTVTKQKEFDINSLRHTNLASNGARKITSSEFTRVQPSSYADFTETNRFPRVLQGQEIYPLRSLAGKVDLNLNSWGKTNVSYTNYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQLENVSFNTPSAQIGALRNEVGISGFTIRNKQKLQDNISAAASLGANLRISNDKNFNAKVNPCRLFGFSLSAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCVMVSKIHIYTQEEVEKMTIGMMNDDNQSCLEHTPLIVEASKSSSVGQPDSSPTVVRI